F406839

General Info

Members Datasets Scaffolds Average Seq Length
323 162 646 449

Family's Representative Sequence

Representative Sequence 3300005546|Ga0070696_100005049|Ga0070696_1000050492
Length 476
Sequence VGTAVILREQAARFAWDDPLELLISGNPMAGSVLLIDDDVDVLRSIGSYFERLGYEVTRELSGEAGLATFDRLRPEVVILDLRLPGMNGMEVLEELRQRDAACILLTGDSDVPTAVRAMQLGAENFLTKPVDMEHLAAATARVADKARLRRINEALLVQSAPGHGLDSLGTSSGMQDFAHQVALLAQSERTTVLLTGESGTGKGWVARMIHDLSPRAKAPFVEVNCAGLNATFLDSELFGHEKGAFTDAKDRKQGLFEIADHGTIFLDEIGDLAPELQPKLLKVLETKTFRRLGGTREITVDVRLVAATNKNLQSEVENTRFREDLYYRLSVMPLMLPAVRDRSREDRLSLITRLMSDLRAELPDGPATLSSEVLERLLAYGWPGNVREMRNVLERALILGRGQGAVSVEHLPGEFRARPGIGDRRHTPLSLEDLERQHIERTLKHHTGNRTRAAIELGISRATLINKIKRYNLTS

Samples

Sample ID Description Type Environment
1 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
59 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
62 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
63 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
64 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
65 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
66 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
67 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
68 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
69 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
85 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
92 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
93 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
94 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
95 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
96 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
97 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
98 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
101 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
102 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
107 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
125 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
126 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
132 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
136 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
137 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
138 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
139 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
143 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
144 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
145 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
146 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
147 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
148 3300049770 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_B_4_control Metagenome Rhizosphere
149 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
152 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
157 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
158 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
161 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
162 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.31
Nodule 0
Rhizoplane 9.91
Rhizosphere 89.47
Stem 0
Stem Tuber 0
Unclassified 0.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070696_100005049 3300005546 Bacteria 8818
2 Ga0065715_10103934 3300005293 Bacteria 2997
3 Ga0070680_100055087 3300005336 Bacteria 3249
4 Ga0070687_100002465 3300005343 Bacteria 6952
5 Ga0070668_100025764 3300005347 Bacteria 4460
6 Ga0070671_100010826 3300005355 Bacteria 7319
7 Ga0070713_100152816 3300005436 Bacteria 2055
8 Ga0070711_100044942 3300005439 Bacteria 3000
9 Ga0070705_100002713 3300005440 Bacteria 8842
10 Ga0070705_100138956 3300005440 Bacteria 1596
11 Ga0070694_100035117 3300005444 Bacteria 3312
12 Ga0070708_100003179 3300005445 Bacteria 12810
13 Ga0070708_100025627 3300005445 Bacteria 5043
14 Ga0070708_100035642 3300005445 Bacteria 4335
15 Ga0070708_100135837 3300005445 Bacteria 2278
16 Ga0070708_100287509 3300005445 Bacteria 1548
17 Ga0070678_100020603 3300005456 Bacteria 4328
18 Ga0070662_100001514 3300005457 Bacteria 14283
19 Ga0068867_100264104 3300005459 Bacteria 1404
20 Ga0070685_10001048 3300005466 Bacteria 14827
21 Ga0070706_100005141 3300005467 Bacteria 12490
22 Ga0070706_100062160 3300005467 Bacteria 3450
23 Ga0070707_100002437 3300005468 Bacteria 17714
24 Ga0070707_100005382 3300005468 Bacteria 11975
25 Ga0070707_100013299 3300005468 Bacteria 7698
26 Ga0070707_100022513 3300005468 Bacteria 5958
27 Ga0070707_100054470 3300005468 Bacteria 3835
28 Ga0070698_100003719 3300005471 Bacteria 16756
29 Ga0070698_100088920 3300005471 Bacteria 3073
30 Ga0070698_100127440 3300005471 Bacteria 2502
31 Ga0070699_100000095 3300005518 Bacteria 84699
32 Ga0070699_100002091 3300005518 Bacteria 18070
33 Ga0070699_100003574 3300005518 Bacteria 13745
34 Ga0070699_100009611 3300005518 Bacteria 8376
35 Ga0070699_100010090 3300005518 Bacteria 8178
36 Ga0070699_100024398 3300005518 Bacteria 5210
37 Ga0070699_100045491 3300005518 Bacteria 3799
38 Ga0070679_100035645 3300005530 Bacteria 4936
39 Ga0070697_100011284 3300005536 Bacteria 6980
40 Ga0070697_100050640 3300005536 Bacteria 3372
41 Ga0070686_100000009 3300005544 Bacteria 202453
42 Ga0070696_100011984 3300005546 Bacteria 5810
43 Ga0070696_100048219 3300005546 Bacteria 2956
44 Ga0070696_100142831 3300005546 Bacteria 1751
45 Ga0070704_100000942 3300005549 Bacteria 14693
46 Ga0070704_100011842 3300005549 Bacteria 5367
47 Ga0070704_100035461 3300005549 Bacteria 3391
48 Ga0070664_100014141 3300005564 Bacteria 6511
49 Ga0070664_100024885 3300005564 Bacteria 4959
50 Ga0070664_100054541 3300005564 Bacteria 3391
51 Ga0068859_100008947 3300005617 Bacteria 10111
52 Ga0068859_100127177 3300005617 Bacteria 2618
53 Ga0068863_100056773 3300005841 Bacteria 3706
54 Ga0081455_10040991 3300005937 Bacteria 4079
55 Ga0081538_10045689 3300005981 Bacteria 2711
56 Ga0075428_100058070 3300006844 Bacteria 4236
57 Ga0075431_100005097 3300006847 Bacteria 12918
58 Ga0075433_10174043 3300006852 Bacteria 1915
59 Ga0075434_100061882 3300006871 Bacteria 3725
60 Ga0075434_100063404 3300006871 Bacteria 3678
61 Ga0075429_100001116 3300006880 Bacteria 21651
62 Ga0075436_100035224 3300006914 Bacteria 3453
63 Ga0097620_100008948 3300006931 Bacteria 10111
64 Ga0097620_100127178 3300006931 Bacteria 2618
65 Ga0075435_100065653 3300007076 Bacteria 2951
66 Ga0075435_100068514 3300007076 Bacteria 2891
67 Ga0075435_100094565 3300007076 Bacteria 2470
68 Ga0111539_10216787 3300009094 Bacteria 2229
69 Ga0114129_10000220 3300009147 Bacteria 63451
70 Ga0114129_10017439 3300009147 Bacteria 10224
71 Ga0114129_10060114 3300009147 Bacteria 5313
72 Ga0114129_10414440 3300009147 Bacteria 1773
73 Ga0105248_10007125 3300009177 Bacteria 12255
74 Ga0105248_10357562 3300009177 Bacteria 1644
75 Ga0105249_10178638 3300009553 Bacteria 2063
76 Ga0105239_10005915 3300010375 Bacteria 14248
77 Ga0207684_10009998 3300025910 Bacteria 8363
78 Ga0207684_10082929 3300025910 Bacteria 2730
79 Ga0207707_10014760 3300025912 Bacteria 6806
80 Ga0207707_10124823 3300025912 Bacteria 2251
81 Ga0207660_10026173 3300025917 Bacteria 3970
82 Ga0207662_10002966 3300025918 Bacteria 8637
83 Ga0207662_10049886 3300025918 Bacteria 2484
84 Ga0207652_10018755 3300025921 Bacteria 5678
85 Ga0207646_10002179 3300025922 Bacteria 23362
86 Ga0207646_10019373 3300025922 Bacteria 6326
87 Ga0207646_10085656 3300025922 Bacteria 2818
88 Ga0207644_10006110 3300025931 Bacteria 7852
89 Ga0207706_10001199 3300025933 Bacteria 26172
90 Ga0207711_10088716 3300025941 Bacteria 2716
91 Ga0207711_10095281 3300025941 Bacteria 2625
92 Ga0207661_10050067 3300025944 Bacteria 3327
93 Ga0207679_10113335 3300025945 Bacteria 2145
94 Ga0207651_10060315 3300025960 Bacteria 2633
95 Ga0207678_10091747 3300026067 Bacteria 2596
96 Ga0207641_10056974 3300026088 Bacteria 3323
97 Ga0207641_10291089 3300026088 Bacteria 1539
98 Ga0207676_10009597 3300026095 Bacteria 6891
99 Ga0207676_10019931 3300026095 Bacteria 4899
100 Ga0207683_10041583 3300026121 Bacteria 4014
101 Ga0265334_10004726 3300028573 Bacteria 5993
102 Ga0265323_10002315 3300028653 Bacteria 8812
103 Ga0265323_10002848 3300028653 Bacteria 7777
104 Ga0265323_10004793 3300028653 Bacteria 5791
105 Ga0265323_10009471 3300028653 Bacteria 3977
106 Ga0265338_10011626 3300028800 Bacteria 10146
107 Ga0265338_10017886 3300028800 Bacteria 7614
108 Ga0265338_10075146 3300028800 Bacteria 2869
109 Ga0265324_10000095 3300029957 Bacteria 68687
110 Ga0265330_10000991 3300031235 Bacteria 17344
111 Ga0265330_10001406 3300031235 Bacteria 14087
112 Ga0265330_10001737 3300031235 Bacteria 12274
113 Ga0265330_10002254 3300031235 Bacteria 10613
114 Ga0265330_10003881 3300031235 Bacteria 7688
115 Ga0265320_10039359 3300031240 Bacteria 2365
116 Ga0265325_10002265 3300031241 Bacteria 13042
117 Ga0265325_10039412 3300031241 Bacteria 2488
118 Ga0265329_10000566 3300031242 Bacteria 19173
119 Ga0265340_10000203 3300031247 Bacteria 29789
120 Ga0265339_10000056 3300031249 Bacteria 99515
121 Ga0265331_10019881 3300031250 Bacteria 3458
122 Ga0265316_10000272 3300031344 Bacteria 58100
123 Ga0265316_10000408 3300031344 Bacteria 49187
124 Ga0265316_10031316 3300031344 Bacteria 4350
125 Ga0265316_10034229 3300031344 Bacteria 4128
126 Ga0265316_10037642 3300031344 Bacteria 3903
127 Ga0265316_10077649 3300031344 Bacteria 2549
128 Ga0307408_100089573 3300031548 Bacteria 2319
129 Ga0307408_100093133 3300031548 Bacteria 2279
130 Ga0265313_10002047 3300031595 Bacteria 18088
131 Ga0265314_10000030 3300031711 Bacteria 266231
132 Ga0265342_10000936 3300031712 Bacteria 29007
133 Ga0265342_10004549 3300031712 Bacteria 10856
134 Ga0265342_10005677 3300031712 Bacteria 9446
135 Ga0265342_10006022 3300031712 Bacteria 9107
136 Ga0265342_10018434 3300031712 Bacteria 4520
137 Ga0265342_10065448 3300031712 Bacteria 2130
138 Ga0307405_10003901 3300031731 Bacteria 6961
139 Ga0307405_10017572 3300031731 Bacteria 3928
140 Ga0307405_10032837 3300031731 Bacteria 3072
141 Ga0307413_10000395 3300031824 Bacteria 13959
142 Ga0307413_10002346 3300031824 Bacteria 7685
143 Ga0307413_10003235 3300031824 Bacteria 6822
144 Ga0307413_10003309 3300031824 Bacteria 6762
145 Ga0307413_10010080 3300031824 Bacteria 4560
146 Ga0307413_10023166 3300031824 Bacteria 3361
147 Ga0307413_10030689 3300031824 Bacteria 3022
148 Ga0307413_10080141 3300031824 Bacteria 2089
149 Ga0307413_10113303 3300031824 Bacteria 1820
150 Ga0307413_10143873 3300031824 Bacteria 1652
151 Ga0307410_10001606 3300031852 Bacteria 10366
152 Ga0307410_10012093 3300031852 Bacteria 4970
153 Ga0307410_10015487 3300031852 Bacteria 4525
154 Ga0307410_10018096 3300031852 Bacteria 4250
155 Ga0307410_10026290 3300031852 Bacteria 3663
156 Ga0307410_10029876 3300031852 Bacteria 3476
157 Ga0307410_10036361 3300031852 Bacteria 3206
158 Ga0307410_10083114 3300031852 Bacteria 2254
159 Ga0307406_10009486 3300031901 Bacteria 5460
160 Ga0307406_10013226 3300031901 Bacteria 4723
161 Ga0307406_10024128 3300031901 Bacteria 3628
162 Ga0307406_10094925 3300031901 Bacteria 2017
163 Ga0307406_10114015 3300031901 Bacteria 1866
164 Ga0307412_10044410 3300031911 Bacteria 2899
165 Ga0307412_10066833 3300031911 Bacteria 2438
166 Ga0307409_100000311 3300031995 Bacteria 19889
167 Ga0307409_100001382 3300031995 Bacteria 11839
168 Ga0307409_100005402 3300031995 Bacteria 7346
169 Ga0307409_100008549 3300031995 Bacteria 6224
170 Ga0307409_100019854 3300031995 Bacteria 4563
171 Ga0307416_100002453 3300032002 Bacteria 10652
172 Ga0307416_100011376 3300032002 Bacteria 5928
173 Ga0307416_100103846 3300032002 Bacteria 2482
174 Ga0307416_100164993 3300032002 Bacteria 2053
175 Ga0307414_10010870 3300032004 Bacteria 5311
176 Ga0307414_10051219 3300032004 Bacteria 2865
177 Ga0307414_10076446 3300032004 Bacteria 2433
178 Ga0307411_10000562 3300032005 Bacteria 13227
179 Ga0307411_10007769 3300032005 Bacteria 5498
180 Ga0307411_10008731 3300032005 Bacteria 5270
181 Ga0307411_10017042 3300032005 Bacteria 4127
182 Ga0307411_10023723 3300032005 Bacteria 3640
183 Ga0307415_100001413 3300032126 Bacteria 11472
184 Ga0307415_100019078 3300032126 Bacteria 4156
185 Ga0307415_100023488 3300032126 Bacteria 3828
186 Ga0373959_0000008 3300034820 Bacteria 54263
187 Ga0373928_0013302 3300035084 Bacteria 1652
188 Ga0395899_0090026 3300037312 Bacteria 2225
189 Ga0395898_0210898 3300037466 Bacteria 1853
190 Ga0395905_0113926 3300037471 Bacteria 2541
191 Ga0436364_1194856 3300037853 Bacteria 11512
192 Ga0395901_0449543 3300038443 Bacteria 1318
193 Ga0439439_0009132 3300041406 Bacteria 2353
194 Ga0439448_0002243 3300042005 Bacteria 5220
195 Ga0451577_0006635 3300042876 Bacteria 11495
196 Ga0451577_0201817 3300042876 Bacteria 1795
197 Ga0466969_0043373 3300044656 Bacteria 2242
198 Ga0453683_0029378 3300044673 Bacteria 3476
199 Ga0466961_0004667 3300044693 Bacteria 8606
200 Ga0453684_0012317 3300044712 Bacteria 14153
201 Ga0451576_0009258 3300045051 Bacteria 11446
202 Ga0451576_0019199 3300045051 Bacteria 7466
203 Ga0451576_0086081 3300045051 Bacteria 3269
204 Ga0495580_0080686 3300046472 Bacteria 2268
205 Ga0495643_0000059 3300046522 Bacteria 192508
206 Ga0496100_0010018 3300048903 Bacteria 5353
207 Ga0496101_0055151 3300048904 Bacteria 2870
208 Ga0496101_0131048 3300048904 Bacteria 1904
209 Ga0496102_0035963 3300048905 Bacteria 4460
210 Ga0496102_0083264 3300048905 Bacteria 2952
211 Ga0496102_0086415 3300048905 Bacteria 2896
212 Ga0496103_0006303 3300048906 Bacteria 7090
213 Ga0496104_0021966 3300048907 Bacteria 5862
214 Ga0496104_0023440 3300048907 Bacteria 5674
215 Ga0496106_0016439 3300048909 Bacteria 5474
216 Ga0496107_0049155 3300048910 Bacteria 3039
217 Ga0496108_0001156 3300048911 Bacteria 20587
218 Ga0496108_0001254 3300048911 Bacteria 19854
219 Ga0496108_0030800 3300048911 Bacteria 4445
220 Ga0496108_0072430 3300048911 Bacteria 2908
221 Ga0496109_0005227 3300048912 Bacteria 10840
222 Ga0496109_0007397 3300048912 Bacteria 9293
223 Ga0496109_0042162 3300048912 Bacteria 4133
224 Ga0496109_0137658 3300048912 Bacteria 2282
225 Ga0496109_0264377 3300048912 Bacteria 1621
226 Ga0496110_0001579 3300048913 Bacteria 16636
227 Ga0496110_0006746 3300048913 Bacteria 9131
228 Ga0496110_0008866 3300048913 Bacteria 8108
229 Ga0496111_0001616 3300048914 Bacteria 13041
230 Ga0496111_0168613 3300048914 Bacteria 1626
231 Ga0496112_0000179 3300048915 Bacteria 40553
232 Ga0496112_0009625 3300048915 Bacteria 8716
233 Ga0496113_0017295 3300048916 Bacteria 5001
234 Ga0496113_0022055 3300048916 Bacteria 4498
235 Ga0496113_0039292 3300048916 Bacteria 3482
236 Ga0496113_0068381 3300048916 Bacteria 2695
237 Ga0496115_0046891 3300048918 Bacteria 3456
238 Ga0501031_0199697 3300049568 Bacteria 1305
239 Ga0501032_0098476 3300049569 Bacteria 1938
240 Ga0501033_0072913 3300049570 Bacteria 2521
241 Ga0501034_0000959 3300049571 Bacteria 41631
242 Ga0501034_0013526 3300049571 Bacteria 8399
243 Ga0501034_0037022 3300049571 Bacteria 4941
244 Ga0501036_0016908 3300049572 Bacteria 6093
245 Ga0501036_0063919 3300049572 Bacteria 3116
246 Ga0501036_0123770 3300049572 Bacteria 2184
247 Ga0501036_0151382 3300049572 Bacteria 1957
248 Ga0501038_0028389 3300049574 Bacteria 4972
249 Ga0501039_0019204 3300049575 Bacteria 5244
250 Ga0501040_0037887 3300049576 Bacteria 3278
251 Ga0501048_0013524 3300049582 Bacteria 6056
252 Ga0501048_0067326 3300049582 Bacteria 2532
253 Ga0501067_0000044 3300049583 Bacteria 74423
254 Ga0501067_0011084 3300049583 Bacteria 4988
255 Ga0501067_0030992 3300049583 Bacteria 2967
256 Ga0501067_0047617 3300049583 Bacteria 2378
257 Ga0501068_0000318 3300049584 Bacteria 24125
258 Ga0501069_0000538 3300049585 Bacteria 17320
259 Ga0501069_0000603 3300049585 Bacteria 16604
260 Ga0501069_0033980 3300049585 Bacteria 2809
261 Ga0501069_0100473 3300049585 Bacteria 1642
262 Ga0501070_0000223 3300049586 Bacteria 53874
263 Ga0501070_0013640 3300049586 Bacteria 6846
264 Ga0501070_0034629 3300049586 Bacteria 4221
265 Ga0501070_0068879 3300049586 Bacteria 2929
266 Ga0501071_0000325 3300049587 Bacteria 23068
267 Ga0501071_0000780 3300049587 Bacteria 16945
268 Ga0501071_0007684 3300049587 Bacteria 7105
269 Ga0501072_0000440 3300049588 Bacteria 29727
270 Ga0501072_0002702 3300049588 Bacteria 13305
271 Ga0501072_0012593 3300049588 Bacteria 6467
272 Ga0501073_0003710 3300049589 Bacteria 11474
273 Ga0501073_0053346 3300049589 Bacteria 2830
274 Ga0501074_0000664 3300049590 Bacteria 21423
275 Ga0501074_0005125 3300049590 Bacteria 9414
276 Ga0501074_0035759 3300049590 Bacteria 3599
277 Ga0501075_0005807 3300049591 Bacteria 8444
278 Ga0501075_0098680 3300049591 Bacteria 2217
279 Ga0501076_0007308 3300049592 Bacteria 8036
280 Ga0501076_0115976 3300049592 Bacteria 2167
281 Ga0501077_0082848 3300049593 Unclassified 2032
282 Ga0501202_002175 3300049652 Bacteria 3266
283 Ga0501235_006079 3300049669 Bacteria 2626
284 Ga0501257_012995 3300049686 Bacteria 1908
285 Ga0501221_002518 3300049704 Bacteria 3021
286 Ga0501225_0006450 3300049705 Bacteria 3425
287 Ga0501079_0013075 3300049741 Bacteria 6331
288 Ga0501079_0087232 3300049741 Bacteria 2416
289 Ga0501080_0001285 3300049742 Bacteria 20870
290 Ga0501080_0026820 3300049742 Bacteria 5355
291 Ga0501080_0077293 3300049742 Bacteria 3095
292 Ga0501081_0013398 3300049743 Bacteria 5393
293 Ga0501083_0000560 3300049744 Bacteria 23861
294 Ga0501083_0003983 3300049744 Bacteria 10373
295 Ga0501263_001091 3300049760 Bacteria 2428
296 Ga0501268_001307 3300049765 Bacteria 3081
297 Ga0501270_001117 3300049767 Bacteria 2486
298 Ga0501272_000963 3300049769 Bacteria 2633
299 Ga0501273_000125 3300049770 Bacteria 5077
300 Ga0501045_0080988 3300049824 Bacteria 2394
301 nmdc:mga05p37_42142_c1 3300050507 Bacteria 5608
302 nmdc:mga05p37_7108_c1 3300050507 Bacteria 13194
303 nmdc:mga09592_40230_c1 3300050508 Bacteria 3927
304 nmdc:mga06r32_173699_c1 3300050510 Bacteria 2139
305 nmdc:mga08y16_154193_c1 3300050511 Bacteria 2387
306 nmdc:mga0n895_78665_c1 3300050512 Unclassified 3282
307 nmdc:mga0rr50_88144_c1 3300050513 Bacteria 2410
308 nmdc:mga0rr50_98765_c1 3300050513 Bacteria 2289
309 nmdc:mga08x19_15219_c1 3300050514 Bacteria 4678
310 nmdc:mga08x19_20722_c1 3300050514 Bacteria 4051
311 nmdc:mga0a205_12187_c1 3300050515 Bacteria 7950
312 Ga0500628_004502 3300053129 Bacteria 2308
313 Ga0501084_0001713 3300054114 Bacteria 17410
314 Ga0501084_0001958 3300054114 Bacteria 16438
315 Ga0501084_0065592 3300054114 Bacteria 3038
316 Ga0590071_003247 3300059421 Bacteria 4014
317 Ga0590071_006613 3300059421 Bacteria 2755
318 Ga0590071_007605 3300059421 Bacteria 2562
319 Ga0590074_004443 3300059423 Bacteria 2318
320 Ga0501082_0012438 3300060353 Bacteria 7314
321 Ga0501082_0012833 3300060353 Bacteria 7201
322 Ga0501082_0014981 3300060353 Bacteria 6681
323 Ga0501082_0274946 3300060353 Bacteria 1466
324 Ga0070696_100005049
325 Ga0065715_10103934
326 Ga0070680_100055087
327 Ga0070687_100002465
328 Ga0070668_100025764
329 Ga0070671_100010826
330 Ga0070713_100152816
331 Ga0070711_100044942
332 Ga0070705_100002713
333 Ga0070705_100138956
334 Ga0070694_100035117
335 Ga0070708_100003179
336 Ga0070708_100025627
337 Ga0070708_100035642
338 Ga0070708_100135837
339 Ga0070708_100287509
340 Ga0070678_100020603
341 Ga0070662_100001514
342 Ga0068867_100264104
343 Ga0070685_10001048
344 Ga0070706_100005141
345 Ga0070706_100062160
346 Ga0070707_100002437
347 Ga0070707_100005382
348 Ga0070707_100013299
349 Ga0070707_100022513
350 Ga0070707_100054470
351 Ga0070698_100003719
352 Ga0070698_100088920
353 Ga0070698_100127440
354 Ga0070699_100000095
355 Ga0070699_100002091
356 Ga0070699_100003574
357 Ga0070699_100009611
358 Ga0070699_100010090
359 Ga0070699_100024398
360 Ga0070699_100045491
361 Ga0070679_100035645
362 Ga0070697_100011284
363 Ga0070697_100050640
364 Ga0070686_100000009
365 Ga0070696_100011984
366 Ga0070696_100048219
367 Ga0070696_100142831
368 Ga0070704_100000942
369 Ga0070704_100011842
370 Ga0070704_100035461
371 Ga0070664_100014141
372 Ga0070664_100024885
373 Ga0070664_100054541
374 Ga0068859_100008947
375 Ga0068859_100127177
376 Ga0068863_100056773
377 Ga0081455_10040991
378 Ga0081538_10045689
379 Ga0075428_100058070
380 Ga0075431_100005097
381 Ga0075433_10174043
382 Ga0075434_100061882
383 Ga0075434_100063404
384 Ga0075429_100001116
385 Ga0075436_100035224
386 Ga0097620_100008948
387 Ga0097620_100127178
388 Ga0075435_100065653
389 Ga0075435_100068514
390 Ga0075435_100094565
391 Ga0111539_10216787
392 Ga0114129_10000220
393 Ga0114129_10017439
394 Ga0114129_10060114
395 Ga0114129_10414440
396 Ga0105248_10007125
397 Ga0105248_10357562
398 Ga0105249_10178638
399 Ga0105239_10005915
400 Ga0207684_10009998
401 Ga0207684_10082929
402 Ga0207707_10014760
403 Ga0207707_10124823
404 Ga0207660_10026173
405 Ga0207662_10002966
406 Ga0207662_10049886
407 Ga0207652_10018755
408 Ga0207646_10002179
409 Ga0207646_10019373
410 Ga0207646_10085656
411 Ga0207644_10006110
412 Ga0207706_10001199
413 Ga0207711_10088716
414 Ga0207711_10095281
415 Ga0207661_10050067
416 Ga0207679_10113335
417 Ga0207651_10060315
418 Ga0207678_10091747
419 Ga0207641_10056974
420 Ga0207641_10291089
421 Ga0207676_10009597
422 Ga0207676_10019931
423 Ga0207683_10041583
424 Ga0265334_10004726
425 Ga0265323_10002315
426 Ga0265323_10002848
427 Ga0265323_10004793
428 Ga0265323_10009471
429 Ga0265338_10011626
430 Ga0265338_10017886
431 Ga0265338_10075146
432 Ga0265324_10000095
433 Ga0265330_10000991
434 Ga0265330_10001406
435 Ga0265330_10001737
436 Ga0265330_10002254
437 Ga0265330_10003881
438 Ga0265320_10039359
439 Ga0265325_10002265
440 Ga0265325_10039412
441 Ga0265329_10000566
442 Ga0265340_10000203
443 Ga0265339_10000056
444 Ga0265331_10019881
445 Ga0265316_10000272
446 Ga0265316_10000408
447 Ga0265316_10031316
448 Ga0265316_10034229
449 Ga0265316_10037642
450 Ga0265316_10077649
451 Ga0307408_100089573
452 Ga0307408_100093133
453 Ga0265313_10002047
454 Ga0265314_10000030
455 Ga0265342_10000936
456 Ga0265342_10004549
457 Ga0265342_10005677
458 Ga0265342_10006022
459 Ga0265342_10018434
460 Ga0265342_10065448
461 Ga0307405_10003901
462 Ga0307405_10017572
463 Ga0307405_10032837
464 Ga0307413_10000395
465 Ga0307413_10002346
466 Ga0307413_10003235
467 Ga0307413_10003309
468 Ga0307413_10010080
469 Ga0307413_10023166
470 Ga0307413_10030689
471 Ga0307413_10080141
472 Ga0307413_10113303
473 Ga0307413_10143873
474 Ga0307410_10001606
475 Ga0307410_10012093
476 Ga0307410_10015487
477 Ga0307410_10018096
478 Ga0307410_10026290
479 Ga0307410_10029876
480 Ga0307410_10036361
481 Ga0307410_10083114
482 Ga0307406_10009486
483 Ga0307406_10013226
484 Ga0307406_10024128
485 Ga0307406_10094925
486 Ga0307406_10114015
487 Ga0307412_10044410
488 Ga0307412_10066833
489 Ga0307409_100000311
490 Ga0307409_100001382
491 Ga0307409_100005402
492 Ga0307409_100008549
493 Ga0307409_100019854
494 Ga0307416_100002453
495 Ga0307416_100011376
496 Ga0307416_100103846
497 Ga0307416_100164993
498 Ga0307414_10010870
499 Ga0307414_10051219
500 Ga0307414_10076446
501 Ga0307411_10000562
502 Ga0307411_10007769
503 Ga0307411_10008731
504 Ga0307411_10017042
505 Ga0307411_10023723
506 Ga0307415_100001413
507 Ga0307415_100019078
508 Ga0307415_100023488
509 Ga0373959_0000008
510 Ga0373928_0013302
511 Ga0395899_0090026
512 Ga0395898_0210898
513 Ga0395905_0113926
514 Ga0436364_1194856
515 Ga0395901_0449543
516 Ga0439439_0009132
517 Ga0439448_0002243
518 Ga0451577_0006635
519 Ga0451577_0201817
520 Ga0466969_0043373
521 Ga0453683_0029378
522 Ga0466961_0004667
523 Ga0453684_0012317
524 Ga0451576_0009258
525 Ga0451576_0019199
526 Ga0451576_0086081
527 Ga0495580_0080686
528 Ga0495643_0000059
529 Ga0496100_0010018
530 Ga0496101_0055151
531 Ga0496101_0131048
532 Ga0496102_0035963
533 Ga0496102_0083264
534 Ga0496102_0086415
535 Ga0496103_0006303
536 Ga0496104_0021966
537 Ga0496104_0023440
538 Ga0496106_0016439
539 Ga0496107_0049155
540 Ga0496108_0001156
541 Ga0496108_0001254
542 Ga0496108_0030800
543 Ga0496108_0072430
544 Ga0496109_0005227
545 Ga0496109_0007397
546 Ga0496109_0042162
547 Ga0496109_0137658
548 Ga0496109_0264377
549 Ga0496110_0001579
550 Ga0496110_0006746
551 Ga0496110_0008866
552 Ga0496111_0001616
553 Ga0496111_0168613
554 Ga0496112_0000179
555 Ga0496112_0009625
556 Ga0496113_0017295
557 Ga0496113_0022055
558 Ga0496113_0039292
559 Ga0496113_0068381
560 Ga0496115_0046891
561 Ga0501031_0199697
562 Ga0501032_0098476
563 Ga0501033_0072913
564 Ga0501034_0000959
565 Ga0501034_0013526
566 Ga0501034_0037022
567 Ga0501036_0016908
568 Ga0501036_0063919
569 Ga0501036_0123770
570 Ga0501036_0151382
571 Ga0501038_0028389
572 Ga0501039_0019204
573 Ga0501040_0037887
574 Ga0501048_0013524
575 Ga0501048_0067326
576 Ga0501067_0000044
577 Ga0501067_0011084
578 Ga0501067_0030992
579 Ga0501067_0047617
580 Ga0501068_0000318
581 Ga0501069_0000538
582 Ga0501069_0000603
583 Ga0501069_0033980
584 Ga0501069_0100473
585 Ga0501070_0000223
586 Ga0501070_0013640
587 Ga0501070_0034629
588 Ga0501070_0068879
589 Ga0501071_0000325
590 Ga0501071_0000780
591 Ga0501071_0007684
592 Ga0501072_0000440
593 Ga0501072_0002702
594 Ga0501072_0012593
595 Ga0501073_0003710
596 Ga0501073_0053346
597 Ga0501074_0000664
598 Ga0501074_0005125
599 Ga0501074_0035759
600 Ga0501075_0005807
601 Ga0501075_0098680
602 Ga0501076_0007308
603 Ga0501076_0115976
604 Ga0501077_0082848
605 Ga0501202_002175
606 Ga0501235_006079
607 Ga0501257_012995
608 Ga0501221_002518
609 Ga0501225_0006450
610 Ga0501079_0013075
611 Ga0501079_0087232
612 Ga0501080_0001285
613 Ga0501080_0026820
614 Ga0501080_0077293
615 Ga0501081_0013398
616 Ga0501083_0000560
617 Ga0501083_0003983
618 Ga0501263_001091
619 Ga0501268_001307
620 Ga0501270_001117
621 Ga0501272_000963
622 Ga0501273_000125
623 Ga0501045_0080988
624 nmdc:mga05p37_42142_c1
625 nmdc:mga05p37_7108_c1
626 nmdc:mga09592_40230_c1
627 nmdc:mga06r32_173699_c1
628 nmdc:mga08y16_154193_c1
629 nmdc:mga0n895_78665_c1
630 nmdc:mga0rr50_88144_c1
631 nmdc:mga0rr50_98765_c1
632 nmdc:mga08x19_15219_c1
633 nmdc:mga08x19_20722_c1
634 nmdc:mga0a205_12187_c1
635 Ga0500628_004502
636 Ga0501084_0001713
637 Ga0501084_0001958
638 Ga0501084_0065592
639 Ga0590071_003247
640 Ga0590071_006613
641 Ga0590071_007605
642 Ga0590074_004443
643 Ga0501082_0012438
644 Ga0501082_0012833
645 Ga0501082_0014981
646 Ga0501082_0274946

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

33

141

0.98

PF02954

HTH_8

Bacterial regulatory protein, Fis family

431

472

0.98

PF00158

Sigma54_activat

Sigma-54 interaction domain

168

336

0.97

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

169

340

0.93

PF18024

HTH_50

Helix-turn-helix domain

431

475

0.92

PF07728

AAA_5

AAA domain (dynein-related subfamily)

192

330

0.81

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

193

330

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kfc-assembly1.cif.gz_A crystal structure of a hyperactive mutant of response regulator kdpe complexed to its promoter dna 0.9739 1 118
4l5e-assembly1.cif.gz_A-2 crystal structure of a. aeolicus ntrc1 dna binding domain 0.9727 402 446
1zh4-assembly1.cif.gz_A crystal structure of the mg+2/bef3-bound receiver domain of kdp potassium transport system response regulator kdpe 0.972 3 118
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9696 4 118
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9694 4 118
ID Description Score Start End Superfamily
af_P9WGN1_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9827 4 77 3.40.50.2300
af_O69730_8_88_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9779 4 77 3.40.50.2300
5m7nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9765 142 308 3.40.50.300
4l5eA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9727 402 446 1.10.10.60
4d6yA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9684 5 117 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A2V8ULU9-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.9872 195 314 GO:0005524
GO:0006355
AF-A0A529FBT6-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.9869 178 300 GO:0005524
GO:0006355
AF-A0A7C5Q6C3-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.9846 142 310 GO:0005524
GO:0006355
GO:0016887
AF-A0A4R5JHH3-F1-model_v4 deleted 0.98 1 116
AF-A0A382JDV0-F1-model_v4 Response regulatory domain-containing protein 0.979 4 117 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Map