F406709

General Info

Members Datasets Scaffolds Average Seq Length
322 227 264 429

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2941475908|2941477198
Length 483
Sequence WWPRTFSARAGGAGVYRRNYRAAAGMRVHDPASKTRFIHHIVPGPMPPVAGVNMQASIESTGNLERRLTFSLPEDRLQTHISGRLGEIARTTRIKGFRPGKVPAKVIEQRFGQQVRSEAVDGLLRETFDAALREHELRIAGTPRIDKGEGELSFVATVELVPDFGDVDVSKLTVIRHTAEINDADIDQMITNLREQRRSWSPVTRGAQDGDLVALETWSQAGDERLPAEGTEKGGVIVGQGMMFEQIEQGLVGLAAGEEKTLDVEFPADWRVPALAGKQVKVTVKAVDVSAPVLPEVDAEFIKSFGVKGGDVEQFRKDIRANLERELKGALMNRLRREVGEQLIAAYASVEMPPRLVENEARAMLAQQIEQIRRSGRNPGDVPADAHEGFKDAAAKRVLVGLLVGEVARKNDLRLDPKRLNETMRLIASTYEEPEQVIEMYRNDPQLMTGLQNRVMEEQVIDWIAERAQHTEEKLSFQDAIRQ

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
3 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
4 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
5 2643221559 Lysobacter sp. Root559 Isolate Unclassified
6 2643221573 Lysobacter sp. Root604 Isolate Unclassified
7 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
8 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
9 2643221586 Lysobacter sp. Root667 Isolate Unclassified
10 2643221593 Lysobacter sp. Root690 Isolate Unclassified
11 2643221612 Lysobacter sp. Root76 Isolate Unclassified
12 2643221695 Lysobacter sp. Root494 Isolate Unclassified
13 2643221720 Lysobacter sp. Root916 Isolate Unclassified
14 2643221727 Lysobacter sp. Root96 Isolate Unclassified
15 2643221728 Lysobacter sp. Root983 Isolate Unclassified
16 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
17 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
18 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
19 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
20 2818991457 Xanthomonas translucens 569 Isolate Unclassified
21 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
22 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
23 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
24 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
25 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
26 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
27 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
28 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
29 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
30 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
31 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
32 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
33 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
34 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
35 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
36 2919513703 Luteimonas sp. 3794 Isolate Unclassified
37 2919675420 Luteimonas terrae 4099 Isolate Unclassified
38 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
39 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
40 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
41 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
42 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
43 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
44 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
45 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
46 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
47 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
48 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
49 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
50 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
51 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
52 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
53 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
54 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
55 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
56 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
57 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
58 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
59 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
60 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
61 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
62 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
63 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
64 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
65 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
66 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
67 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
68 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
69 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
70 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
71 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
72 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
73 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
74 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
75 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
76 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
77 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
78 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
79 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
80 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
81 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
82 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
83 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
84 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
85 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
86 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
87 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
88 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
89 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
90 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
91 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
92 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
93 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
94 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
95 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
96 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
97 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
98 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
99 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
100 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
101 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
102 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
104 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
105 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
108 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
109 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
110 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
112 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
114 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
130 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
131 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
133 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
134 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
135 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
137 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
138 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
139 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
140 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
141 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
142 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
143 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
144 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
145 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
146 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
147 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
148 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
149 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
150 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
151 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
152 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
153 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
154 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
155 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
156 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
157 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
158 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
159 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
160 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
161 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
162 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
163 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
164 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
165 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
166 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
167 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
168 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
169 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
170 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
171 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
172 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
173 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
174 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
175 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
176 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
177 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
178 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
179 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
180 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
181 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
182 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
183 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
184 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
185 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
186 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
187 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
188 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
189 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
190 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
191 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
192 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
193 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
194 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
195 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
196 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
197 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
198 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
199 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
200 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
201 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
202 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
204 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
205 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
206 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
207 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
208 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
209 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
210 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
211 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
212 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
213 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
214 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
215 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
216 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
217 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
218 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
219 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
220 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
221 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
222 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
223 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
224 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
225 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
226 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
227 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.68
Metatranscriptomes 0.31
Isolates 18.01

Biome Distribution

Category Percentage (%)
Aerial Root 0.31
Bulb 0
Endosphere 16.46
Nodule 0.31
Rhizoplane 3.73
Rhizosphere 59.32
Stem 0
Stem Tuber 0
Unclassified 19.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1762832 2162886007 Bacteria 4602
2 JGI25152J39213_1000027 3300002773 Bacteria 101064
3 JGI25152J39213_1000094 3300002773 Bacteria 62510
4 JGI25150J39212_1000069 3300002774 Bacteria 62349
5 JGI25150J39212_1000329 3300002774 Bacteria 23313
6 JGI25151J46595_10000070 3300003187 Bacteria 139035
7 JGI25151J46595_10000091 3300003187 Bacteria 122600
8 JGI25153J46596_10000401 3300003215 Bacteria 28990
9 Ga0055526_1000234 3300003771 Bacteria 46624
10 Ga0055537_1000597 3300003773 Bacteria 20121
11 Ga0055536_1008649 3300003781 Bacteria 4335
12 Ga0055534_1000149 3300003784 Bacteria 51999
13 Ga0055528_1000342 3300003790 Bacteria 38489
14 Ga0055530_10000953 3300003791 Bacteria 23664
15 Ga0055531_10022598 3300003794 Bacteria 2390
16 Ga0055531_10029775 3300003794 Bacteria 1851
17 Ga0058692_1000064 3300003856 Bacteria 90988
18 Ga0058692_1000115 3300003856 Bacteria 52582
19 Ga0065704_10070322 3300005289 Bacteria 33019
20 Ga0065704_10070867 3300005289 Bacteria 15240
21 Ga0065715_10022635 3300005293 Bacteria 2207
22 Ga0070670_100008051 3300005331 Bacteria 8968
23 Ga0068869_100029961 3300005334 Bacteria 3816
24 Ga0070668_100028979 3300005347 Bacteria 4203
25 Ga0070669_100001865 3300005353 Bacteria 15175
26 Ga0070667_100205391 3300005367 Bacteria 1749
27 Ga0070711_100137013 3300005439 Bacteria 1831
28 Ga0070679_100022342 3300005530 Bacteria 6184
29 Ga0070672_100029576 3300005543 Bacteria 4109
30 Ga0070665_100036540 3300005548 Bacteria 4940
31 Ga0070665_100119488 3300005548 Bacteria 2638
32 Ga0068852_100021720 3300005616 Bacteria 5133
33 Ga0068859_100068709 3300005617 Bacteria 3578
34 Ga0068863_100294791 3300005841 Bacteria 1572
35 Ga0081539_10041836 3300005985 Bacteria 2674
36 Ga0075364_10000455 3300006051 Bacteria 20670
37 Ga0097621_100057364 3300006237 Bacteria 3184
38 Ga0097621_100198777 3300006237 Bacteria 1739
39 Ga0068871_100129127 3300006358 Bacteria 2141
40 Ga0105251_10000063 3300009011 Bacteria 101276
41 Ga0105251_10005880 3300009011 Bacteria 7933
42 Ga0105243_10017838 3300009148 Bacteria 5369
43 Ga0105242_10080323 3300009176 Bacteria 2725
44 Ga0105248_10016327 3300009177 Bacteria 8172
45 Ga0105029_100268 3300009984 Bacteria 2711
46 Ga0157371_10001257 3300013102 Bacteria 26762
47 Ga0157371_10125212 3300013102 Bacteria 1827
48 Ga0157370_10110347 3300013104 Bacteria 2572
49 Ga0157370_10164772 3300013104 Bacteria 2061
50 Ga0157369_10064054 3300013105 Bacteria 3959
51 Ga0163162_10015010 3300013306 Bacteria 7566
52 Ga0163162_10191539 3300013306 Bacteria 2173
53 Ga0157375_10000940 3300013308 Bacteria 25256
54 Ga0157375_10261588 3300013308 Bacteria 1892
55 Ga0182008_10003701 3300014497 Bacteria 9122
56 Ga0182008_10054283 3300014497 Bacteria 1983
57 Ga0157379_10202244 3300014968 Bacteria 1796
58 Ga0157376_10009524 3300014969 Bacteria 7060
59 Ga0182007_10000386 3300015262 Bacteria 27402
60 Ga0182005_1014868 3300015265 Bacteria 2175
61 Ga0182005_1027405 3300015265 Bacteria 1553
62 Ga0163161_10011299 3300017792 Bacteria 6188
63 Ga0163161_10023137 3300017792 Bacteria 4380
64 Ga0163161_10123816 3300017792 Bacteria 1945
65 Ga0206349_1357919 3300020075 Bacteria 2951
66 Ga0207425_1000400 3300025245 Bacteria 29226
67 Ga0209129_1000011 3300025258 Bacteria 568657
68 Ga0209565_1000031 3300025263 Bacteria 320341
69 Ga0209673_1000204 3300025273 Bacteria 119618
70 Ga0209130_1004322 3300025284 Bacteria 5466
71 Ga0209130_1015241 3300025284 Bacteria 1901
72 Ga0209675_1000015 3300025291 Bacteria 403517
73 Ga0209675_1012284 3300025291 Bacteria 2771
74 Ga0209676_1000034 3300025292 Bacteria 460125
75 Ga0209676_1000110 3300025292 Bacteria 214083
76 Ga0209676_1000429 3300025292 Bacteria 73168
77 Ga0209676_1004788 3300025292 Bacteria 7368
78 Ga0209676_1005353 3300025292 Bacteria 6748
79 Ga0209025_1000002 3300025294 Bacteria 1393142
80 Ga0209025_1000015 3300025294 Bacteria 808120
81 Ga0209025_1021849 3300025294 Bacteria 3421
82 Ga0209025_1023693 3300025294 Bacteria 3197
83 Ga0209564_1000037 3300025295 Bacteria 414794
84 Ga0209564_1017131 3300025295 Bacteria 2843
85 Ga0209758_1000003 3300025297 Bacteria 1398533
86 Ga0209758_1038066 3300025297 Bacteria 1850
87 Ga0209050_1000917 3300025298 Bacteria 38818
88 Ga0209050_1001228 3300025298 Bacteria 29751
89 Ga0209050_1001358 3300025298 Bacteria 26798
90 Ga0209050_1035130 3300025298 Bacteria 1487
91 Ga0209256_1004157 3300025299 Bacteria 9342
92 Ga0209256_1006156 3300025299 Bacteria 6490
93 Ga0209051_1002244 3300025303 Bacteria 14206
94 Ga0209051_1017054 3300025303 Bacteria 3258
95 Ga0209257_1000129 3300025304 Bacteria 214155
96 Ga0209257_1000133 3300025304 Bacteria 208808
97 Ga0209257_1000468 3300025304 Bacteria 73770
98 Ga0209257_1002380 3300025304 Bacteria 18846
99 Ga0209257_1021356 3300025304 Bacteria 2354
100 Ga0207713_1002984 3300025735 Bacteria 11828
101 Ga0207713_1007176 3300025735 Bacteria 6639
102 Ga0207688_10096223 3300025901 Bacteria 1705
103 Ga0207657_10075431 3300025919 Bacteria 2846
104 Ga0207652_10133862 3300025921 Bacteria 2212
105 Ga0207681_10006491 3300025923 Bacteria 7180
106 Ga0207650_10025148 3300025925 Bacteria 4240
107 Ga0207686_10043250 3300025934 Bacteria 2759
108 Ga0207709_10000690 3300025935 Bacteria 27239
109 Ga0207709_10002229 3300025935 Bacteria 12357
110 Ga0207691_10001528 3300025940 Bacteria 23015
111 Ga0207679_10149116 3300025945 Bacteria 1901
112 Ga0207668_10015047 3300025972 Bacteria 4801
113 Ga0207703_10174595 3300026035 Bacteria 1893
114 Ga0207641_10224632 3300026088 Bacteria 1743
115 Ga0207683_10028169 3300026121 Bacteria 4857
116 Ga0207698_10032172 3300026142 Bacteria 3797
117 Ga0209371_1000004 3300027312 Bacteria 1098197
118 Ga0209371_1000044 3300027312 Bacteria 327086
119 Ga0209984_1000526 3300027424 Bacteria 4190
120 Ga0209982_1000348 3300027552 Bacteria 5635
121 Ga0209983_1000584 3300027665 Bacteria 7872
122 Ga0209971_1000367 3300027682 Bacteria 12302
123 Ga0209974_10000815 3300027876 Bacteria 10692
124 Ga0209974_10016419 3300027876 Bacteria 2459
125 Ga0268266_10135750 3300028379 Bacteria 2203
126 Ga0268256_1000005 3300030500 Bacteria 1082342
127 Ga0268256_1000046 3300030500 Bacteria 327003
128 Ga0316177_1110138 3300030731 Bacteria 3310
129 Ga0316176_1022297 3300030732 Bacteria 2666
130 Ga0314311_1104139 3300030733 Bacteria 3571
131 Ga0316183_1054756 3300030742 Bacteria 3054
132 Ga0307513_10073620 3300031456 Bacteria 3556
133 Ga0307408_100082305 3300031548 Bacteria 2409
134 Ga0307408_100221691 3300031548 Bacteria 1543
135 Ga0307413_10015653 3300031824 Bacteria 3894
136 Ga0307406_10002735 3300031901 Bacteria 9620
137 Ga0307406_10008456 3300031901 Bacteria 5743
138 Ga0307406_10086754 3300031901 Bacteria 2097
139 Ga0307412_10009197 3300031911 Bacteria 5663
140 Ga0307416_100327069 3300032002 Bacteria 1538
141 Ga0307414_10002824 3300032004 Bacteria 9156
142 Ga0307414_10014734 3300032004 Bacteria 4698
143 Ga0307414_10020980 3300032004 Bacteria 4085
144 Ga0307414_10070911 3300032004 Bacteria 2511
145 Ga0307414_10081853 3300032004 Bacteria 2365
146 Ga0307414_10089674 3300032004 Bacteria 2279
147 Ga0307414_10112784 3300032004 Bacteria 2073
148 Ga0307411_10059253 3300032005 Bacteria 2537
149 Ga0307415_100002594 3300032126 Bacteria 9029
150 Ga0373957_0033572 3300035120 Bacteria 1896
151 Ga0373955_0090876 3300035172 Bacteria 1740
152 Ga0316582_0088560 3300036647 Bacteria 2034
153 Ga0316584_0106468 3300036712 Bacteria 2098
154 Ga0395900_0047024 3300037418 Bacteria 4443
155 Ga0395900_0252797 3300037418 Bacteria 1763
156 Ga0395905_0001903 3300037471 Bacteria 24042
157 Ga0395905_0068406 3300037471 Bacteria 3326
158 Ga0395901_0340970 3300038443 Bacteria 1548
159 Ga0439436_0008331 3300041404 Bacteria 3184
160 Ga0439436_0013493 3300041404 Bacteria 2470
161 Ga0439436_0014106 3300041404 Bacteria 2416
162 Ga0439447_009232 3300041407 Bacteria 3003
163 Ga0439465_0004283 3300041413 Bacteria 4640
164 Ga0439465_0020552 3300041413 Bacteria 2068
165 Ga0451791_0398518 3300041451 Bacteria 1499
166 Ga0451797_1468659 3300041453 Bacteria 1860
167 Ga0451800_1615837 3300041459 Bacteria 4317
168 Ga0451806_123191 3300041462 Bacteria 10399
169 Ga0451804_0501639 3300041463 Bacteria 3069
170 Ga0451807_0891225 3300041486 Bacteria 2836
171 Ga0451807_1960369 3300041486 Bacteria 1853
172 Ga0439432_009864 3300042006 Bacteria 3322
173 Ga0439432_041403 3300042006 Bacteria 1459
174 Ga0439449_0001221 3300042007 Bacteria 10082
175 Ga0439449_0006961 3300042007 Bacteria 4309
176 Ga0439449_0010528 3300042007 Bacteria 3494
177 Ga0439449_0012436 3300042007 Bacteria 3199
178 Ga0439452_012838 3300042010 Bacteria 2369
179 Ga0439434_0007898 3300042435 Bacteria 3119
180 Ga0451577_0050618 3300042876 Bacteria 3708
181 Ga0495638_0005118 3300046460 Bacteria 9818
182 Ga0495638_0053395 3300046460 Bacteria 2515
183 Ga0495582_0023864 3300046473 Bacteria 3344
184 Ga0495639_0011774 3300046475 Bacteria 3773
185 Ga0495606_0022308 3300046507 Bacteria 4615
186 Ga0495610_0067788 3300046512 Bacteria 1675
187 Ga0495630_0111116 3300046517 Bacteria 2076
188 Ga0495643_0020188 3300046522 Bacteria 3847
189 Ga0495663_0000702 3300046525 Bacteria 11511
190 Ga0495663_0012493 3300046525 Bacteria 2366
191 Ga0495598_0001201 3300046537 Bacteria 5016
192 Ga0495668_0002813 3300046616 Bacteria 13841
193 Ga0495668_0054910 3300046616 Bacteria 2200
194 Ga0495670_0036608 3300046691 Bacteria 2445
195 Ga0495670_0116898 3300046691 Bacteria 1384
196 Ga0495674_0089219 3300047319 Bacteria 2636
197 Ga0495672_0000936 3300047320 Bacteria 30458
198 Ga0495684_0048361 3300047471 Bacteria 3253
199 Ga0495686_0088198 3300047472 Bacteria 1886
200 Ga0496104_0000011 3300048907 Bacteria 459358
201 Ga0496105_0000071 3300048908 Bacteria 79908
202 Ga0496108_0081559 3300048911 Bacteria 2741
203 Ga0496109_0148290 3300048912 Bacteria 2196
204 Ga0496112_0266858 3300048915 Bacteria 1660
205 Ga0496116_0093466 3300048919 Bacteria 1821
206 Ga0496117_0004961 3300048920 Bacteria 14286
207 Ga0496117_0015924 3300048920 Bacteria 6371
208 Ga0496117_0052239 3300048920 Bacteria 2880
209 Ga0496118_0001773 3300048921 Bacteria 31247
210 Ga0496118_0002947 3300048921 Bacteria 22115
211 Ga0496118_0109810 3300048921 Bacteria 1834
212 Ga0496118_0140429 3300048921 Bacteria 1532
213 Ga0496119_0032442 3300048922 Bacteria 3480
214 Ga0496120_0001235 3300048923 Bacteria 32336
215 Ga0496120_0028042 3300048923 Bacteria 3456
216 Ga0496121_0011424 3300048924 Bacteria 9862
217 Ga0496121_0104502 3300048924 Bacteria 2176
218 Ga0496122_0024308 3300048925 Bacteria 5304
219 Ga0496122_0043685 3300048925 Bacteria 3507
220 Ga0496122_0069977 3300048925 Bacteria 2510
221 Ga0496122_0087018 3300048925 Bacteria 2148
222 Ga0496123_0019714 3300048926 Bacteria 5306
223 Ga0496123_0036495 3300048926 Bacteria 3485
224 Ga0496123_0044663 3300048926 Bacteria 3027
225 Ga0496123_0071154 3300048926 Bacteria 2171
226 Ga0496124_0000018 3300048927 Bacteria 442940
227 Ga0496124_0019346 3300048927 Bacteria 6340
228 Ga0496124_0023484 3300048927 Bacteria 5628
229 Ga0496124_0036253 3300048927 Bacteria 4305
230 Ga0496124_0120464 3300048927 Bacteria 2097
231 Ga0496125_0062649 3300048928 Bacteria 2972
232 Ga0496125_0125633 3300048928 Bacteria 1818
233 Ga0496126_0032514 3300048929 Bacteria 4914
234 Ga0501031_0017223 3300049568 Bacteria 4695
235 Ga0501031_0135097 3300049568 Bacteria 1611
236 Ga0501032_0046530 3300049569 Bacteria 2932
237 Ga0501033_0002653 3300049570 Bacteria 15039
238 Ga0501033_0176027 3300049570 Bacteria 1535
239 Ga0501034_0000316 3300049571 Bacteria 85497
240 Ga0501034_0000762 3300049571 Bacteria 48359
241 Ga0501034_0070240 3300049571 Bacteria 3513
242 Ga0501034_0152169 3300049571 Bacteria 2289
243 Ga0501036_0058427 3300049572 Bacteria 3267
244 Ga0501037_0036964 3300049573 Bacteria 3598
245 Ga0501037_0204298 3300049573 Bacteria 1395
246 Ga0501038_0062260 3300049574 Bacteria 3188
247 Ga0501039_0053053 3300049575 Bacteria 3137
248 Ga0501039_0191756 3300049575 Bacteria 1607
249 Ga0501043_0093694 3300049579 Bacteria 2361
250 Ga0501047_0105493 3300049581 Bacteria 2698
251 Ga0501070_0054612 3300049586 Bacteria 3312
252 Ga0501071_0070705 3300049587 Bacteria 2543
253 Ga0501073_0035281 3300049589 Bacteria 3556
254 Ga0501257_011672 3300049686 Bacteria 2008
255 Ga0501225_0012935 3300049705 Bacteria 2339
256 Ga0501265_000525 3300049762 Bacteria 4075
257 Ga0501275_001018 3300049772 Bacteria 2897
258 Ga0501035_0060469 3300049822 Bacteria 3372
259 Ga0501035_0061759 3300049822 Bacteria 3334
260 Ga0501044_0043955 3300049823 Bacteria 4639
261 Ga0501044_0079552 3300049823 Bacteria 3321
262 nmdc:mga00v17_45728_c1 3300050491 Bacteria 2646
263 nmdc:mga00v17_9759_c1 3300050491 Bacteria 4896
264 Ga0500634_0032959 3300053161 Bacteria 2823

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049573 Ga0501037_0204298 Ga0501037_0204298_138_1373 375
2 3300049575 Ga0501039_0191756 Ga0501039_0191756_350_1585 375
3 3300048915 Ga0496112_0266858 Ga0496112_0266858_466_1650 376
4 3300049568 Ga0501031_0135097 Ga0501031_0135097_94_1383 389
5 3300049571 Ga0501034_0070240 Ga0501034_0070240_1125_2429 390
6 3300049571 Ga0501034_0152169 Ga0501034_0152169_508_1797 396
7 3300049574 Ga0501038_0062260 Ga0501038_0062260_1239_2528 396
8 3300049822 Ga0501035_0061759 Ga0501035_0061759_364_1653 396
9 3300049823 Ga0501044_0043955 Ga0501044_0043955_932_2221 396
10 3300031824 Ga0307413_10015653 Ga0307413_100156533 401
11 3300031911 Ga0307412_10009197 Ga0307412_100091972 401
12 3300031548 Ga0307408_100221691 Ga0307408_1002216912 402
13 3300032002 Ga0307416_100327069 Ga0307416_1003270691 402
14 3300042435 Ga0439434_0007898 Ga0439434_0007898_756_2078 402
15 3300032126 Ga0307415_100002594 Ga0307415_10000259413 403
16 3300046691 Ga0495670_0116898 Ga0495670_0116898_71_1366 408
17 3300013308 Ga0157375_10261588 Ga0157375_102615882 410
18 3300046537 Ga0495598_0001201 Ga0495598_0001201_349_1614 410
19 3300031548 Ga0307408_100082305 Ga0307408_1000823053 411
20 3300031901 Ga0307406_10086754 Ga0307406_100867542 411
21 3300041451 Ga0451791_0398518 Ga0451791_0398518_102_1397 411
22 3300005530 Ga0070679_100022342 Ga0070679_1000223424 412
23 3300006237 Ga0097621_100057364 Ga0097621_1000573647 412
24 3300006237 Ga0097621_100198777 Ga0097621_1001987771 412
25 3300006358 Ga0068871_100129127 Ga0068871_1001291271 412
26 3300013104 Ga0157370_10164772 Ga0157370_101647723 412
27 3300017792 Ga0163161_10023137 Ga0163161_1002313710 412
28 3300005334 Ga0068869_100029961 Ga0068869_10002996110 413
29 3300046616 Ga0495668_0054910 Ga0495668_0054910_380_1675 413
30 3300048912 Ga0496109_0148290 Ga0496109_0148290_802_2097 413
31 3300005293 Ga0065715_10022635 Ga0065715_100226352 414
32 3300032004 Ga0307414_10014734 Ga0307414_100147347 414
33 3300037418 Ga0395900_0047024 Ga0395900_0047024_1568_2866 414
34 3300037471 Ga0395905_0001903 Ga0395905_0001903_17717_19015 414
35 3300037471 Ga0395905_0068406 Ga0395905_0068406_24_1322 414
36 3300038443 Ga0395901_0340970 Ga0395901_0340970_26_1324 414
37 3300048911 Ga0496108_0081559 Ga0496108_0081559_1410_2708 414
38 3300005616 Ga0068852_100021720 Ga0068852_1000217204 417
39 3300026142 Ga0207698_10032172 Ga0207698_100321727 417
40 3300005841 Ga0068863_100294791 Ga0068863_1002947912 419
41 3300009177 Ga0105248_10016327 Ga0105248_100163273 419
42 3300013306 Ga0163162_10191539 Ga0163162_101915392 419
43 3300014968 Ga0157379_10202244 Ga0157379_102022442 419
44 3300026035 Ga0207703_10174595 Ga0207703_101745952 419
45 3300026088 Ga0207641_10224632 Ga0207641_102246322 419
46 3300027424 Ga0209984_1000526 Ga0209984_10005264 420
47 3300027552 Ga0209982_1000348 Ga0209982_10003484 420
48 3300027665 Ga0209983_1000584 Ga0209983_10005843 420
49 3300027682 Ga0209971_1000367 Ga0209971_10003679 420
50 3300027876 Ga0209974_10000815 Ga0209974_100008152 420
51 3300027876 Ga0209974_10016419 Ga0209974_100164192 420
52 3300005617 Ga0068859_100068709 Ga0068859_1000687093 422
53 3300014969 Ga0157376_10009524 Ga0157376_100095243 422
54 3300026121 Ga0207683_10028169 Ga0207683_100281693 422
55 3300009176 Ga0105242_10080323 Ga0105242_100803233 423
56 3300013306 Ga0163162_10015010 Ga0163162_1001501010 423
57 3300013308 Ga0157375_10000940 Ga0157375_1000094026 423
58 3300025934 Ga0207686_10043250 Ga0207686_100432503 423
59 3300042006 Ga0439432_041403 Ga0439432_041403_95_1387 423
60 3300042007 Ga0439449_0010528 Ga0439449_0010528_1211_2503 423
61 3300042876 Ga0451577_0050618 Ga0451577_0050618_1171_2454 423
62 3300046691 Ga0495670_0036608 Ga0495670_0036608_869_2164 423
63 3300048907 Ga0496104_0000011 Ga0496104_0000011_278040_279341 423
64 3300048908 Ga0496105_0000071 Ga0496105_0000071_57193_58494 423
65 3300005367 Ga0070667_100205391 Ga0070667_1002053911 424
66 3300005543 Ga0070672_100029576 Ga0070672_1000295762 424
67 3300025940 Ga0207691_10001528 Ga0207691_1000152814 424
68 3300036647 Ga0316582_0088560 Ga0316582_0088560_509_1822 425
69 3300036712 Ga0316584_0106468 Ga0316584_0106468_182_1495 425
70 iso_pu_bacteria 2571042365 2572255324 426
71 iso_pu_bacteria 2643221559 2643818673 426
72 iso_pu_bacteria 2643221573 2643878328 426
73 iso_pu_bacteria 2643221579 2643908211 426
74 iso_pu_bacteria 2643221581 2643915591 426
75 iso_pu_bacteria 2643221586 2643940924 426
76 iso_pu_bacteria 2643221593 2643974477 426
77 iso_pu_bacteria 2643221612 2644080034 426
78 iso_pu_bacteria 2643221720 2644659633 426
79 iso_pu_bacteria 2643221727 2644695629 426
80 iso_pu_bacteria 2643221728 2644700621 426
81 iso_pu_bacteria 2747842501 2748018039 426
82 iso_pu_bacteria 2842780639 2842781457 426
83 iso_pu_bacteria 2852649853 2852653177 426
84 iso_pu_bacteria 2894414249 2894416412 426
85 iso_pu_bacteria 2919513703 2919516722 426
86 iso_pu_bacteria 2919675420 2919677157 426
87 iso_pu_bacteria 2923516293 2923518877 426
88 iso_pu_bacteria 8002869464 8002871753 426
89 3300032004 Ga0307414_10089674 Ga0307414_100896743 427
90 3300049570 Ga0501033_0002653 Ga0501033_0002653_894_2186 427
91 iso_pu_bacteria 2547132130 2547499863 427
92 iso_pu_bacteria 2547132130 2547500076 427
93 iso_pu_bacteria 2547132130 2547500495 427
94 iso_pu_bacteria 2576861471 2578459439 427
95 iso_pu_bacteria 2643221695 2644529896 427
96 iso_pu_bacteria 2747842428 2747947799 427
97 iso_pu_bacteria 2765235840 2765577870 427
98 iso_pu_bacteria 2816332141 2816515931 427
99 iso_pu_bacteria 2818991457 2819660550 427
100 iso_pu_bacteria 2842391507 2842394254 427
101 iso_pu_bacteria 2842757796 2842759821 427
102 iso_pu_bacteria 2852684882 2852688916 427
103 iso_pu_bacteria 2857442823 2857446302 427
104 iso_pu_bacteria 2874220319 2874220472 427
105 iso_pu_bacteria 2895498888 2895502503 427
106 iso_pu_bacteria 2895511927 2895514168 427
107 iso_pu_bacteria 2895522137 2895524353 427
108 iso_pu_bacteria 2895525241 2895526450 427
109 iso_pu_bacteria 2919089067 2919091742 427
110 iso_pu_bacteria 2919130084 2919130173 427
111 iso_pu_bacteria 2919134579 2919134850 427
112 iso_pu_bacteria 2928496128 2928498563 427
113 iso_pu_bacteria 2929195423 2929198827 427
114 iso_pu_bacteria 2931380184 2931381871 427
115 iso_pu_bacteria 2937610967 2937611364 427
116 iso_pu_bacteria 2939589442 2939591937 427
117 iso_pu_bacteria 2939622612 2939625968 427
118 iso_pu_bacteria 2939626828 2939629882 427
119 iso_pu_bacteria 2961047084 2961047237 427
120 iso_pu_bacteria 2961064222 2961068609 427
121 iso_pu_bacteria 2974307012 2974309898 427
122 iso_pu_bacteria 2977247770 2977250633 427
123 iso_pu_bacteria 2984514374 2984514885 427
124 iso_pu_bacteria 2987605356 2987605737 427
125 iso_pu_bacteria 8003014200 8003016371 427
126 iso_pu_bacteria 8021622325 8021622420 427
127 iso_pu_bacteria 8021626552 8021630289 427
128 iso_pu_bacteria 8021648035 8021652193 427
129 3300005439 Ga0070711_100137013 Ga0070711_1001370132 428
130 3300035120 Ga0373957_0033572 Ga0373957_0033572_411_1712 428
131 3300035172 Ga0373955_0090876 Ga0373955_0090876_187_1488 428
132 3300046473 Ga0495582_0023864 Ga0495582_0023864_731_2032 428
133 3300046475 Ga0495639_0011774 Ga0495639_0011774_1376_2677 428
134 3300046517 Ga0495630_0111116 Ga0495630_0111116_308_1609 428
135 3300047319 Ga0495674_0089219 Ga0495674_0089219_230_1531 428
136 3300047471 Ga0495684_0048361 Ga0495684_0048361_733_2034 428
137 3300049686 Ga0501257_011672 Ga0501257_011672_84_1394 428
138 3300003187 JGI25151J46595_10000070 JGI25151J46595_100000705 430
139 3300005289 Ga0065704_10070867 Ga0065704_100708673 430
140 3300005347 Ga0070668_100028979 Ga0070668_1000289793 430
141 3300005353 Ga0070669_100001865 Ga0070669_10000186515 430
142 3300009984 Ga0105029_100268 Ga0105029_1002683 430
143 3300013102 Ga0157371_10001257 Ga0157371_100012571 430
144 3300013102 Ga0157371_10125212 Ga0157371_101252122 430
145 3300013105 Ga0157369_10064054 Ga0157369_100640542 430
146 3300015262 Ga0182007_10000386 Ga0182007_100003862 430
147 3300015265 Ga0182005_1014868 Ga0182005_10148683 430
148 3300025292 Ga0209676_1000034 Ga0209676_1000034197 430
149 3300025294 Ga0209025_1000015 Ga0209025_100001594 430
150 3300025304 Ga0209257_1000468 Ga0209257_100046862 430
151 3300025919 Ga0207657_10075431 Ga0207657_100754312 430
152 3300025921 Ga0207652_10133862 Ga0207652_101338622 430
153 3300025923 Ga0207681_10006491 Ga0207681_100064913 430
154 3300025945 Ga0207679_10149116 Ga0207679_101491162 430
155 3300025972 Ga0207668_10015047 Ga0207668_100150474 430
156 3300031456 Ga0307513_10073620 Ga0307513_100736201 430
157 3300031901 Ga0307406_10002735 Ga0307406_100027353 430
158 3300031901 Ga0307406_10008456 Ga0307406_100084563 430
159 3300032004 Ga0307414_10002824 Ga0307414_100028242 430
160 3300032004 Ga0307414_10020980 Ga0307414_100209804 430
161 3300032004 Ga0307414_10081853 Ga0307414_100818531 430
162 3300037418 Ga0395900_0252797 Ga0395900_0252797_306_1613 430
163 3300041404 Ga0439436_0008331 Ga0439436_0008331_444_1742 430
164 3300041404 Ga0439436_0013493 Ga0439436_0013493_295_1587 430
165 3300041407 Ga0439447_009232 Ga0439447_009232_1262_2563 430
166 3300041413 Ga0439465_0020552 Ga0439465_0020552_311_1603 430
167 3300041453 Ga0451797_1468659 Ga0451797_1468659_197_1489 430
168 3300041486 Ga0451807_1960369 Ga0451807_1960369_306_1598 430
169 3300042007 Ga0439449_0001221 Ga0439449_0001221_1341_2633 430
170 3300046460 Ga0495638_0053395 Ga0495638_0053395_224_1516 430
171 3300046507 Ga0495606_0022308 Ga0495606_0022308_1278_2612 430
172 3300046525 Ga0495663_0000702 Ga0495663_0000702_1084_2376 430
173 3300046525 Ga0495663_0012493 Ga0495663_0012493_576_1877 430
174 3300046616 Ga0495668_0002813 Ga0495668_0002813_552_1853 430
175 3300048921 Ga0496118_0140429 Ga0496118_0140429_181_1497 430
176 3300048923 Ga0496120_0001235 Ga0496120_0001235_28077_29453 430
177 3300048924 Ga0496121_0104502 Ga0496121_0104502_53_1429 430
178 3300048925 Ga0496122_0069977 Ga0496122_0069977_219_1511 430
179 3300048925 Ga0496122_0087018 Ga0496122_0087018_329_1621 430
180 3300048926 Ga0496123_0071154 Ga0496123_0071154_351_1643 430
181 3300048927 Ga0496124_0000018 Ga0496124_0000018_204392_205684 430
182 3300048927 Ga0496124_0023484 Ga0496124_0023484_192_1568 430
183 3300048928 Ga0496125_0062649 Ga0496125_0062649_671_2014 430
184 3300048928 Ga0496125_0125633 Ga0496125_0125633_205_1581 430
185 3300049568 Ga0501031_0017223 Ga0501031_0017223_1180_2484 430
186 3300049569 Ga0501032_0046530 Ga0501032_0046530_962_2266 430
187 3300049570 Ga0501033_0176027 Ga0501033_0176027_30_1334 430
188 3300049571 Ga0501034_0000316 Ga0501034_0000316_3523_4824 430
189 3300049571 Ga0501034_0000762 Ga0501034_0000762_1132_2424 430
190 3300049572 Ga0501036_0058427 Ga0501036_0058427_793_2097 430
191 3300049573 Ga0501037_0036964 Ga0501037_0036964_1001_2305 430
192 3300049575 Ga0501039_0053053 Ga0501039_0053053_1057_2361 430
193 3300049579 Ga0501043_0093694 Ga0501043_0093694_1030_2334 430
194 3300049581 Ga0501047_0105493 Ga0501047_0105493_289_1593 430
195 3300049586 Ga0501070_0054612 Ga0501070_0054612_1363_2667 430
196 3300049587 Ga0501071_0070705 Ga0501071_0070705_768_2072 430
197 3300049589 Ga0501073_0035281 Ga0501073_0035281_2143_3447 430
198 3300049705 Ga0501225_0012935 Ga0501225_0012935_854_2146 430
199 3300049762 Ga0501265_000525 Ga0501265_000525_402_1706 430
200 3300049772 Ga0501275_001018 Ga0501275_001018_1377_2681 430
201 3300049822 Ga0501035_0060469 Ga0501035_0060469_1271_2575 430
202 3300049823 Ga0501044_0079552 Ga0501044_0079552_708_2012 430
203 3300050491 nmdc:mga00v17_45728_c1 nmdc:mga00v17_45728_c1_834_2141 430
204 iso_pu_bacteria 2941475908 2941477198 430
205 2162886007 SwRhRL2b_contig_1762832 SwRhRL2b_0894.00000750 431
206 3300002773 JGI25152J39213_1000027 JGI25152J39213_100002725 431
207 3300002773 JGI25152J39213_1000094 JGI25152J39213_100009456 431
208 3300002774 JGI25150J39212_1000069 JGI25150J39212_100006956 431
209 3300002774 JGI25150J39212_1000329 JGI25150J39212_100032926 431
210 3300003187 JGI25151J46595_10000091 JGI25151J46595_1000009126 431
211 3300003215 JGI25153J46596_10000401 JGI25153J46596_100004019 431
212 3300003771 Ga0055526_1000234 Ga0055526_100023416 431
213 3300003773 Ga0055537_1000597 Ga0055537_10005974 431
214 3300003781 Ga0055536_1008649 Ga0055536_10086498 431
215 3300003784 Ga0055534_1000149 Ga0055534_100014932 431
216 3300003790 Ga0055528_1000342 Ga0055528_100034222 431
217 3300003791 Ga0055530_10000953 Ga0055530_1000095319 431
218 3300003794 Ga0055531_10022598 Ga0055531_100225982 431
219 3300003794 Ga0055531_10029775 Ga0055531_100297752 431
220 3300003856 Ga0058692_1000064 Ga0058692_100006474 431
221 3300003856 Ga0058692_1000115 Ga0058692_100011532 431
222 3300005289 Ga0065704_10070322 Ga0065704_1007032227 431
223 3300005331 Ga0070670_100008051 Ga0070670_1000080517 431
224 3300005548 Ga0070665_100036540 Ga0070665_1000365403 431
225 3300005548 Ga0070665_100119488 Ga0070665_1001194882 431
226 3300005985 Ga0081539_10041836 Ga0081539_100418362 431
227 3300006051 Ga0075364_10000455 Ga0075364_1000045513 431
228 3300009011 Ga0105251_10000063 Ga0105251_100000634 431
229 3300009011 Ga0105251_10005880 Ga0105251_100058809 431
230 3300009148 Ga0105243_10017838 Ga0105243_100178384 431
231 3300013104 Ga0157370_10110347 Ga0157370_101103474 431
232 3300014497 Ga0182008_10003701 Ga0182008_100037011 431
233 3300014497 Ga0182008_10054283 Ga0182008_100542832 431
234 3300015265 Ga0182005_1027405 Ga0182005_10274051 431
235 3300017792 Ga0163161_10011299 Ga0163161_1001129911 431
236 3300017792 Ga0163161_10123816 Ga0163161_101238163 431
237 3300020075 Ga0206349_1357919 Ga0206349_13579192 431
238 3300025245 Ga0207425_1000400 Ga0207425_100040026 431
239 3300025258 Ga0209129_1000011 Ga0209129_1000011502 431
240 3300025263 Ga0209565_1000031 Ga0209565_100003137 431
241 3300025273 Ga0209673_1000204 Ga0209673_100020495 431
242 3300025284 Ga0209130_1004322 Ga0209130_10043224 431
243 3300025284 Ga0209130_1015241 Ga0209130_10152411 431
244 3300025291 Ga0209675_1000015 Ga0209675_1000015136 431
245 3300025291 Ga0209675_1012284 Ga0209675_10122842 431
246 3300025292 Ga0209676_1000110 Ga0209676_100011078 431
247 3300025292 Ga0209676_1000429 Ga0209676_100042955 431
248 3300025292 Ga0209676_1004788 Ga0209676_10047883 431
249 3300025292 Ga0209676_1005353 Ga0209676_10053537 431
250 3300025294 Ga0209025_1000002 Ga0209025_1000002296 431
251 3300025294 Ga0209025_1021849 Ga0209025_10218495 431
252 3300025294 Ga0209025_1023693 Ga0209025_10236932 431
253 3300025295 Ga0209564_1000037 Ga0209564_1000037232 431
254 3300025295 Ga0209564_1017131 Ga0209564_10171314 431
255 3300025297 Ga0209758_1000003 Ga0209758_1000003303 431
256 3300025297 Ga0209758_1038066 Ga0209758_10380662 431
257 3300025298 Ga0209050_1000917 Ga0209050_100091738 431
258 3300025298 Ga0209050_1001228 Ga0209050_10012282 431
259 3300025298 Ga0209050_1001358 Ga0209050_100135810 431
260 3300025298 Ga0209050_1035130 Ga0209050_10351301 431
261 3300025299 Ga0209256_1004157 Ga0209256_10041572 431
262 3300025299 Ga0209256_1006156 Ga0209256_10061565 431
263 3300025303 Ga0209051_1002244 Ga0209051_10022444 431
264 3300025303 Ga0209051_1017054 Ga0209051_10170543 431
265 3300025304 Ga0209257_1000129 Ga0209257_100012978 431
266 3300025304 Ga0209257_1000133 Ga0209257_100013344 431
267 3300025304 Ga0209257_1002380 Ga0209257_10023804 431
268 3300025304 Ga0209257_1021356 Ga0209257_10213563 431
269 3300025735 Ga0207713_1002984 Ga0207713_10029844 431
270 3300025735 Ga0207713_1007176 Ga0207713_10071764 431
271 3300025901 Ga0207688_10096223 Ga0207688_100962231 431
272 3300025925 Ga0207650_10025148 Ga0207650_100251485 431
273 3300025935 Ga0207709_10000690 Ga0207709_1000069011 431
274 3300025935 Ga0207709_10002229 Ga0207709_100022294 431
275 3300027312 Ga0209371_1000004 Ga0209371_1000004948 431
276 3300027312 Ga0209371_1000044 Ga0209371_100004432 431
277 3300028379 Ga0268266_10135750 Ga0268266_101357502 431
278 3300030500 Ga0268256_1000005 Ga0268256_100000599 431
279 3300030500 Ga0268256_1000046 Ga0268256_100004632 431
280 3300030731 Ga0316177_1110138 Ga0316177_11101381 431
281 3300030732 Ga0316176_1022297 Ga0316176_10222972 431
282 3300030733 Ga0314311_1104139 Ga0314311_11041393 431
283 3300030742 Ga0316183_1054756 Ga0316183_10547564 431
284 3300032004 Ga0307414_10070911 Ga0307414_100709111 431
285 3300032004 Ga0307414_10112784 Ga0307414_101127841 431
286 3300032005 Ga0307411_10059253 Ga0307411_100592533 431
287 3300041404 Ga0439436_0014106 Ga0439436_0014106_603_1904 431
288 3300041413 Ga0439465_0004283 Ga0439465_0004283_1961_3262 431
289 3300041459 Ga0451800_1615837 Ga0451800_1615837_1917_3212 431
290 3300041462 Ga0451806_123191 Ga0451806_123191_8081_9376 431
291 3300041463 Ga0451804_0501639 Ga0451804_0501639_290_1585 431
292 3300041486 Ga0451807_0891225 Ga0451807_0891225_302_1597 431
293 3300042006 Ga0439432_009864 Ga0439432_009864_600_1901 431
294 3300042007 Ga0439449_0006961 Ga0439449_0006961_287_1588 431
295 3300042007 Ga0439449_0012436 Ga0439449_0012436_1107_2408 431
296 3300042010 Ga0439452_012838 Ga0439452_012838_492_1793 431
297 3300046460 Ga0495638_0005118 Ga0495638_0005118_1316_2611 431
298 3300046512 Ga0495610_0067788 Ga0495610_0067788_223_1518 431
299 3300046522 Ga0495643_0020188 Ga0495643_0020188_200_1495 431
300 3300047320 Ga0495672_0000936 Ga0495672_0000936_28963_30258 431
301 3300047472 Ga0495686_0088198 Ga0495686_0088198_471_1766 431
302 3300048919 Ga0496116_0093466 Ga0496116_0093466_343_1638 431
303 3300048920 Ga0496117_0004961 Ga0496117_0004961_3042_4337 431
304 3300048920 Ga0496117_0015924 Ga0496117_0015924_169_1488 431
305 3300048920 Ga0496117_0052239 Ga0496117_0052239_1476_2771 431
306 3300048921 Ga0496118_0001773 Ga0496118_0001773_29632_30951 431
307 3300048921 Ga0496118_0002947 Ga0496118_0002947_1527_2822 431
308 3300048921 Ga0496118_0109810 Ga0496118_0109810_110_1405 431
309 3300048922 Ga0496119_0032442 Ga0496119_0032442_781_2076 431
310 3300048923 Ga0496120_0028042 Ga0496120_0028042_1381_2676 431
311 3300048924 Ga0496121_0011424 Ga0496121_0011424_8444_9739 431
312 3300048925 Ga0496122_0024308 Ga0496122_0024308_1296_2591 431
313 3300048925 Ga0496122_0043685 Ga0496122_0043685_781_2076 431
314 3300048926 Ga0496123_0019714 Ga0496123_0019714_1289_2584 431
315 3300048926 Ga0496123_0036495 Ga0496123_0036495_1410_2705 431
316 3300048926 Ga0496123_0044663 Ga0496123_0044663_153_1448 431
317 3300048927 Ga0496124_0019346 Ga0496124_0019346_4680_5975 431
318 3300048927 Ga0496124_0036253 Ga0496124_0036253_2817_4112 431
319 3300048927 Ga0496124_0120464 Ga0496124_0120464_563_1942 431
320 3300048929 Ga0496126_0032514 Ga0496126_0032514_307_1602 431
321 3300050491 nmdc:mga00v17_9759_c1 nmdc:mga00v17_9759_c1_1145_2440 431
322 3300053161 Ga0500634_0032959 Ga0500634_0032959_1158_2453 431

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05698

Trigger_C

Bacterial trigger factor protein (TF) C-terminus

311

466

0.98

PF05697

Trigger_N

Bacterial trigger factor protein (TF)

54

193

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1p9y-assembly2.cif.gz_B ribosome binding of e. coli trigger factor mutant f44l. 0.8951 1 111
1p9y-assembly2.cif.gz_B ribosome binding of e. coli trigger factor mutant f44l. 0.8457 1 111
2pbc-assembly4.cif.gz_D fk506-binding protein 2 0.84 155 237
3uqa-assembly1.cif.gz_A crystal structure of a smt fusion peptidyl-prolyl cis-trans isomerase with surface mutation a54e from burkholderia pseudomallei complexed with fk506 0.8254 149 236
4nnr-assembly2.cif.gz_B fkbp13-fk506 complex 0.8252 155 237
ID Description Score Start End Superfamily
1p9yA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Trigger factor ribosome-binding domain 0.8946 1 111 3.30.70.1050
af_P9WG55_151_243_1.10.3120.10 Mainly Alpha;Orthogonal Bundle;Trigger factor, domain 2;Trigger factor, C-terminal domain 0.8505 147 243 1.10.3120.10
1p9yA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Trigger factor ribosome-binding domain 0.8452 1 111 3.30.70.1050
af_P9WG55_151_243_1.10.3120.10 Mainly Alpha;Orthogonal Bundle;Trigger factor, domain 2;Trigger factor, C-terminal domain 0.8422 147 243 1.10.3120.10
af_Q5Z4M6_246_353_1.10.3120.10 Mainly Alpha;Orthogonal Bundle;Trigger factor, domain 2;Trigger factor, C-terminal domain 0.8401 145 243 1.10.3120.10
ID Description Score Start End GO Terms
AF-A0A382H5L8-F1-model_v4 Trigger factor ribosome-binding bacterial domain-containing protein 0.9459 1 99 GO:0003755
GO:0015031
GO:0043022
GO:0043335
GO:0044183
GO:0051083
GO:0061077
AF-A0A661BN97-F1-model_v4 Trigger factor 0.928 1 98 GO:0003755
GO:0015031
GO:0043022
GO:0043335
GO:0044183
GO:0051083
GO:0061077
AF-A0A1B1BWY8-F1-model_v4 deleted 0.9121 131 243
AF-A0A484VXF2-F1-model_v4 Trigger factor (EC 5.2.1.8) 0.9112 1 99 GO:0015031
GO:0043022
GO:0043335
GO:0044183
GO:0051083
GO:0061077
GO:0140839
GO:0140840
AF-A0A800C5K1-F1-model_v4 peptidylprolyl isomerase (EC 5.2.1.8) 0.9103 147 232 GO:0003755
GO:0005829
GO:0031419
GO:0046872
GO:0051539

Feature Viewer

pLDDT pTM Quality
92.38 0.74 High
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Predicted Structure (AlphaFold2)

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Map