F406195

General Info

Members Datasets Scaffolds Average Seq Length
321 200 301 335

Family's Representative Sequence

Representative Sequence 3300053108|Ga0500562_000042|Ga0500562_000042_3563_4642
Length 359
Sequence MFLPILYPLQITKLMLYVVATFLWASILLYLLLGGADFGAGILELFTTEANRSRTRKTMYRAIGPIWEANHMWLIIAIVILFVGFPAIYTTMSVYLHIPLTAMLLGIIARGTAFTFRHYDAVVDDMQTVYNRIFTWSSLITPLFLGIIAGSAVAGSIDTKATGFVDAYIFSWLHWFSVATGCFTVAICAFLAAIYLIGETDNDIDKKRFIAKARSSNIAAVISGALVFIAARVQGIPVAEWIFGNSVGLTAITAASLSLVLLWYLLYKGKTRVLRVLAGFQVTMILLTTTYRHYPKIVLLKGGDYLSLLEHKGHDKTIEALAIALLIGSLFILPALFYLIYSFQYKDKILEWKQKGLKN

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2738541283 Pedobacter sp. OK701 Isolate Unclassified
3 2738541284 Pedobacter sp. YR016 Isolate Unclassified
4 2738543023 Pedobacter sp. OK628 Isolate Unclassified
5 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
6 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
7 2818991444 Filimonas endophytica 3197 Isolate Unclassified
8 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
9 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
10 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
11 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
12 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
13 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
14 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
15 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
16 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
17 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
18 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
19 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
20 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
21 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
22 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
23 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
24 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
25 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
26 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
27 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
28 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
29 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
30 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
31 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
32 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
33 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
34 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
35 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
36 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
37 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
38 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
39 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
40 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
41 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
42 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
43 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
44 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
45 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
46 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
47 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
48 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
49 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
50 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
51 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
52 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
53 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
54 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
55 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
56 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
57 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
58 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
59 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
60 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
80 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
81 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
82 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
83 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
84 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
85 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
86 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
87 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
89 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
91 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
92 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
94 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
96 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
97 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
131 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
132 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
133 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
134 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
135 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
136 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
137 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
138 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
139 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
140 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
141 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
142 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
143 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
144 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
145 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
146 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
147 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
148 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
149 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
150 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
151 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
152 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
153 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
154 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
155 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
156 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
157 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
158 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
159 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
160 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
161 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
162 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
163 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
164 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
165 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
166 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
167 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
168 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
169 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
170 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
171 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
178 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
179 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
180 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
184 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
185 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
186 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
187 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
188 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
189 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
190 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
191 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
192 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
193 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
194 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
195 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
196 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
197 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
198 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
199 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
200 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.77
Metatranscriptomes 0
Isolates 6.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.9
Nodule 0
Rhizoplane 0.62
Rhizosphere 76.01
Stem 0
Stem Tuber 0
Unclassified 12.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1001588 3300001904 Bacteria 4137
2 JGI24737J22298_10001640 3300001990 Bacteria 7978
3 JGI24737J22298_10010207 3300001990 Bacteria 3105
4 JGI24735J21928_10015087 3300002067 Bacteria 2414
5 JGI25162J39368_1003771 3300002737 Bacteria 4050
6 JGI25154J39366_1000041 3300002738 Bacteria 144221
7 JGI25165J46597_1000620 3300003214 Bacteria 29837
8 JGI25153J46596_10003758 3300003215 Bacteria 8378
9 rootH1_10075993 3300003316 Bacteria 4349
10 rootH2_10038714 3300003320 Bacteria 21716
11 rootH2_10083939 3300003320 Bacteria 11337
12 rootH2_10245453 3300003320 Bacteria 1472
13 rootL2_10010105 3300003322 Bacteria 3508
14 rootL2_10153797 3300003322 Bacteria 4329
15 rootH1_10002605 3300003323 Bacteria 51064
16 rootH1_10023683 3300003323 Bacteria 6061
17 rootH1_10065577 3300003323 Bacteria 7522
18 rootH1_10132040 3300003323 Bacteria 1029
19 rootH1_10139120 3300003323 Bacteria 12505
20 rootH1_10157522 3300003323 Bacteria 3780
21 rootH1_10186168 3300003323 Bacteria 2945
22 rootH1_10295033 3300003323 Bacteria 3722
23 Ga0055542_1001478 3300003762 Bacteria 11546
24 Ga0055536_1012794 3300003781 Bacteria 3081
25 Ga0065165_1000501 3300005262 Bacteria 60618
26 Ga0065165_1017890 3300005262 Bacteria 2591
27 Ga0065165_1026913 3300005262 Bacteria 1883
28 Ga0065714_10002264 3300005288 Bacteria 49232
29 Ga0065714_10002371 3300005288 Bacteria 27622
30 Ga0065714_10011471 3300005288 Bacteria 2607
31 Ga0065714_10070483 3300005288 Bacteria 3854
32 Ga0065714_10137257 3300005288 Bacteria 1199
33 Ga0065704_10000196 3300005289 Bacteria 186428
34 Ga0065704_10089498 3300005289 Bacteria 2819
35 Ga0070680_100000878 3300005336 Bacteria 21341
36 Ga0070680_100158622 3300005336 Bacteria 1901
37 Ga0070682_100002697 3300005337 Bacteria 9825
38 Ga0068868_100345439 3300005338 Bacteria 1273
39 Ga0070660_100043550 3300005339 Bacteria 3431
40 Ga0070691_10002969 3300005341 Bacteria 7593
41 Ga0070675_100026510 3300005354 Bacteria 4652
42 Ga0070671_100045651 3300005355 Bacteria 3643
43 Ga0070673_100045973 3300005364 Bacteria 3389
44 Ga0070659_100003474 3300005366 Bacteria 11211
45 Ga0070659_100195376 3300005366 Unclassified 1664
46 Ga0070667_100020264 3300005367 Bacteria 5521
47 Ga0070662_100000246 3300005457 Bacteria 31970
48 Ga0070681_10034886 3300005458 Bacteria 5052
49 Ga0070681_10084398 3300005458 Bacteria 3128
50 Ga0068867_100007171 3300005459 Bacteria 7878
51 Ga0070679_100003316 3300005530 Bacteria 14753
52 Ga0068853_100041244 3300005539 Bacteria 3941
53 Ga0068853_100104776 3300005539 Bacteria 2504
54 Ga0070672_100013427 3300005543 Bacteria 5786
55 Ga0070693_100000650 3300005547 Bacteria 15328
56 Ga0070665_100000125 3300005548 Bacteria 146809
57 Ga0068855_100000122 3300005563 Bacteria 97622
58 Ga0068855_100000771 3300005563 Bacteria 39483
59 Ga0068855_100017149 3300005563 Bacteria 8712
60 Ga0068855_100021745 3300005563 Bacteria 7693
61 Ga0068855_100163578 3300005563 Bacteria 2524
62 Ga0068857_100006959 3300005577 Bacteria 9735
63 Ga0068856_100003241 3300005614 Bacteria 16562
64 Ga0068856_100013921 3300005614 Bacteria 7780
65 Ga0068852_100000507 3300005616 Bacteria 25648
66 Ga0068852_100306653 3300005616 Bacteria 1538
67 Ga0068852_100384602 3300005616 Bacteria 1377
68 Ga0068851_10133285 3300005834 Unclassified 1345
69 Ga0070717_10000164 3300006028 Bacteria 50120
70 Ga0097621_100000542 3300006237 Bacteria 26594
71 Ga0068871_100003155 3300006358 Bacteria 11320
72 Ga0105240_10000039 3300009093 Bacteria 270117
73 Ga0105240_10002364 3300009093 Bacteria 30415
74 Ga0105240_10021668 3300009093 Bacteria 8543
75 Ga0105240_10034100 3300009093 Bacteria 6569
76 Ga0105240_10051808 3300009093 Bacteria 5163
77 Ga0105240_10430670 3300009093 Bacteria 1480
78 Ga0114129_10093204 3300009147 Bacteria 4173
79 Ga0105241_10001741 3300009174 Bacteria 16523
80 Ga0105241_10006161 3300009174 Bacteria 8845
81 Ga0105241_10006664 3300009174 Bacteria 8499
82 Ga0105241_10015041 3300009174 Bacteria 5669
83 Ga0105242_10041375 3300009176 Bacteria 3717
84 Ga0105237_10000271 3300009545 Bacteria 73094
85 Ga0105237_10001802 3300009545 Bacteria 27654
86 Ga0105237_10002306 3300009545 Bacteria 23725
87 Ga0105237_10025511 3300009545 Bacteria 6045
88 Ga0105239_10000002 3300010375 Bacteria 610298
89 Ga0105239_10000013 3300010375 Bacteria 327371
90 Ga0105239_10001188 3300010375 Bacteria 35645
91 Ga0105239_10004499 3300010375 Bacteria 16638
92 Ga0105239_10037711 3300010375 Bacteria 5297
93 Ga0105239_10127867 3300010375 Bacteria 2825
94 Ga0105239_10309277 3300010375 Unclassified 1781
95 Ga0105246_10316560 3300011119 Bacteria 1266
96 Ga0157373_10000133 3300013100 Bacteria 58747
97 Ga0157373_10001878 3300013100 Bacteria 15937
98 Ga0157373_10003326 3300013100 Bacteria 12144
99 Ga0157373_10049937 3300013100 Unclassified 2980
100 Ga0157371_10000806 3300013102 Bacteria 35978
101 Ga0157371_10000984 3300013102 Bacteria 31607
102 Ga0157371_10003500 3300013102 Bacteria 14192
103 Ga0157371_10003814 3300013102 Bacteria 13473
104 Ga0157371_10038045 3300013102 Bacteria 3443
105 Ga0157370_10003204 3300013104 Bacteria 19349
106 Ga0157370_10007415 3300013104 Bacteria 11943
107 Ga0157370_10060228 3300013104 Bacteria 3605
108 Ga0157370_10068787 3300013104 Bacteria 3346
109 Ga0157370_10089590 3300013104 Bacteria 2890
110 Ga0157370_10120734 3300013104 Bacteria 2447
111 Ga0157374_10001854 3300013296 Bacteria 17779
112 Ga0157374_10001869 3300013296 Bacteria 17716
113 Ga0157374_10003425 3300013296 Bacteria 13329
114 Ga0157378_10035152 3300013297 Bacteria 4431
115 Ga0157378_10129654 3300013297 Bacteria 2333
116 Ga0163162_10000005 3300013306 Bacteria 447195
117 Ga0163162_10015516 3300013306 Bacteria 7445
118 Ga0163162_10073183 3300013306 Bacteria 3483
119 Ga0157372_10000252 3300013307 Bacteria 59348
120 Ga0157372_10012648 3300013307 Bacteria 8990
121 Ga0157372_10042697 3300013307 Bacteria 5017
122 Ga0157375_10001653 3300013308 Bacteria 19171
123 Ga0157375_10010019 3300013308 Bacteria 8335
124 Ga0157375_10025077 3300013308 Bacteria 5532
125 Ga0163163_10066893 3300014325 Bacteria 3571
126 Ga0157380_10179364 3300014326 Unclassified 1859
127 Ga0157380_10286650 3300014326 Bacteria 1510
128 Ga0182008_10000023 3300014497 Bacteria 201526
129 Ga0182008_10000465 3300014497 Bacteria 30995
130 Ga0157377_10094485 3300014745 Bacteria 1771
131 Ga0157377_10256472 3300014745 Bacteria 1136
132 Ga0157376_10102709 3300014969 Bacteria 2501
133 Ga0182006_1001337 3300015261 Bacteria 15096
134 Ga0182007_10024338 3300015262 Bacteria 2119
135 Ga0182007_10043718 3300015262 Bacteria 1488
136 Ga0182005_1000645 3300015265 Bacteria 16578
137 Ga0163161_10002638 3300017792 Bacteria 12741
138 Ga0163161_10003730 3300017792 Bacteria 10672
139 Ga0213872_10012905 3300021361 Unclassified 3919
140 Ga0207427_100106 3300025231 Bacteria 117041
141 Ga0209437_100226 3300025233 Bacteria 100303
142 Ga0209258_100160 3300025242 Bacteria 154101
143 Ga0209646_1000122 3300025246 Bacteria 144486
144 Ga0209026_1000329 3300025250 Bacteria 47539
145 Ga0209026_1002004 3300025250 Bacteria 8091
146 Ga0209148_1000153 3300025254 Bacteria 147028
147 Ga0209233_1000089 3300025261 Bacteria 316381
148 Ga0209233_1001111 3300025261 Bacteria 10993
149 Ga0209676_1001044 3300025292 Bacteria 31924
150 Ga0209758_1056352 3300025297 Bacteria 1328
151 Ga0207426_1000530 3300025302 Bacteria 55033
152 Ga0209257_1000001 3300025304 Bacteria 2274655
153 Ga0207656_10026822 3300025321 Bacteria 2352
154 Ga0207680_10028557 3300025903 Bacteria 3122
155 Ga0207647_10001313 3300025904 Bacteria 19099
156 Ga0207647_10001525 3300025904 Bacteria 17818
157 Ga0207645_10000741 3300025907 Bacteria 27221
158 Ga0207705_10009530 3300025909 Bacteria 7065
159 Ga0207654_10002660 3300025911 Bacteria 9070
160 Ga0207654_10039700 3300025911 Unclassified 2649
161 Ga0207654_10094613 3300025911 Unclassified 1829
162 Ga0207707_10000722 3300025912 Bacteria 32676
163 Ga0207707_10066328 3300025912 Bacteria 3144
164 Ga0207695_10000058 3300025913 Bacteria 366582
165 Ga0207695_10008010 3300025913 Bacteria 13305
166 Ga0207695_10030768 3300025913 Bacteria 5905
167 Ga0207695_10042476 3300025913 Bacteria 4855
168 Ga0207671_10012948 3300025914 Bacteria 6675
169 Ga0207671_10014645 3300025914 Bacteria 6186
170 Ga0207671_10017641 3300025914 Bacteria 5497
171 Ga0207671_10018806 3300025914 Bacteria 5294
172 Ga0207671_10019473 3300025914 Bacteria 5188
173 Ga0207660_10076990 3300025917 Bacteria 2440
174 Ga0207660_10122299 3300025917 Unclassified 1972
175 Ga0207657_10078697 3300025919 Bacteria 2775
176 Ga0207652_10001629 3300025921 Bacteria 19720
177 Ga0207694_10041010 3300025924 Bacteria 3567
178 Ga0207659_10155401 3300025926 Bacteria 1790
179 Ga0207644_10035582 3300025931 Bacteria 3490
180 Ga0207690_10035190 3300025932 Bacteria 3233
181 Ga0207690_10082084 3300025932 Bacteria 2254
182 Ga0207706_10000858 3300025933 Bacteria 31307
183 Ga0207706_10123101 3300025933 Bacteria 2281
184 Ga0207686_10154211 3300025934 Bacteria 1603
185 Ga0207704_10000023 3300025938 Bacteria 142638
186 Ga0207704_10013755 3300025938 Bacteria 4063
187 Ga0207691_10018652 3300025940 Bacteria 6574
188 Ga0207667_10000020 3300025949 Bacteria 374770
189 Ga0207667_10001880 3300025949 Bacteria 26413
190 Ga0207667_10390413 3300025949 Bacteria 1418
191 Ga0207651_10019372 3300025960 Bacteria 4076
192 Ga0207668_10001832 3300025972 Bacteria 12404
193 Ga0207677_10093546 3300026023 Bacteria 2192
194 Ga0207677_10174734 3300026023 Bacteria 1684
195 Ga0207677_10291823 3300026023 Unclassified 1343
196 Ga0207639_10010277 3300026041 Bacteria 6479
197 Ga0207639_10016520 3300026041 Bacteria 5225
198 Ga0207639_10100381 3300026041 Bacteria 2338
199 Ga0207702_10111735 3300026078 Bacteria 2430
200 Ga0207648_10000849 3300026089 Bacteria 34513
201 Ga0207674_10011947 3300026116 Bacteria 9735
202 Ga0207698_10073128 3300026142 Bacteria 2728
203 Ga0207698_10222068 3300026142 Bacteria 1708
204 Ga0209974_10035899 3300027876 Bacteria 1646
205 Ga0268266_10000132 3300028379 Bacteria 145563
206 Ga0268264_10065069 3300028381 Bacteria 3070
207 Ga0307517_10000929 3300028786 Bacteria 49793
208 Ga0265338_10047968 3300028800 Bacteria 3892
209 Ga0307511_10000754 3300030521 Bacteria 34559
210 Ga0316177_1116921 3300030731 Bacteria 31477
211 Ga0316183_1115944 3300030742 Bacteria 5183
212 Ga0316181_1154881 3300030744 Bacteria 6058
213 Ga0307516_10005977 3300031730 Bacteria 14388
214 Ga0307405_10000082 3300031731 Bacteria 40288
215 Ga0307405_10016703 3300031731 Bacteria 4009
216 Ga0307412_10000004 3300031911 Bacteria 544053
217 Ga0307412_10157244 3300031911 Bacteria 1684
218 Ga0307414_10000259 3300032004 Bacteria 33318
219 Ga0307414_10000961 3300032004 Bacteria 14670
220 Ga0307414_10003898 3300032004 Bacteria 8037
221 Ga0307414_10004111 3300032004 Bacteria 7859
222 Ga0307414_10025143 3300032004 Bacteria 3809
223 Ga0307414_10048767 3300032004 Bacteria 2924
224 Ga0307414_10081278 3300032004 Bacteria 2372
225 Ga0307414_10256539 3300032004 Bacteria 1456
226 Ga0307411_10391137 3300032005 Bacteria 1146
227 Ga0307510_10001509 3300033180 Bacteria 25664
228 Ga0395899_0000033 3300037312 Bacteria 306589
229 Ga0395899_0067092 3300037312 Unclassified 2633
230 Ga0395900_0000314 3300037418 Bacteria 71758
231 Ga0395900_0007748 3300037418 Bacteria 11076
232 Ga0395900_0109662 3300037418 Bacteria 2835
233 Ga0395898_0003293 3300037466 Bacteria 18143
234 Ga0395898_0101552 3300037466 Bacteria 2762
235 Ga0395905_0002656 3300037471 Bacteria 19622
236 Ga0395905_0003201 3300037471 Bacteria 17631
237 Ga0395901_0000343 3300038443 Bacteria 56716
238 Ga0395901_0002911 3300038443 Bacteria 17293
239 Ga0395901_0060429 3300038443 Bacteria 3944
240 Ga0436361_0750597 3300039447 Bacteria 7143
241 Ga0439431_0026086 3300041997 Unclassified 1430
242 Ga0439448_0009711 3300042005 Bacteria 2841
243 Ga0439432_029392 3300042006 Unclassified 1787
244 Ga0439454_006141 3300042011 Bacteria 1465
245 Ga0450898_016827 3300042134 Unclassified 1252
246 Ga0495629_0136043 3300046459 Bacteria 1711
247 Ga0495651_0121037 3300046462 Bacteria 1923
248 Ga0495606_0015880 3300046507 Bacteria 5778
249 Ga0495630_0000003 3300046517 Bacteria 524289
250 Ga0495652_0167926 3300046529 Bacteria 1696
251 Ga0495609_0032348 3300046538 Bacteria 2376
252 Ga0495633_0000039 3300046558 Bacteria 180652
253 Ga0495668_0000459 3300046616 Bacteria 52226
254 Ga0495661_0000599 3300046665 Bacteria 37018
255 Ga0495661_0050270 3300046665 Unclassified 2525
256 Ga0495683_0009140 3300047323 Bacteria 5280
257 Ga0495686_0002958 3300047472 Bacteria 15188
258 Ga0495686_0003411 3300047472 Bacteria 13820
259 Ga0496101_0351054 3300048904 Bacteria 1159
260 Ga0496109_0172437 3300048912 Bacteria 2030
261 Ga0496121_0000007 3300048924 Bacteria 942516
262 Ga0496122_0000804 3300048925 Bacteria 60178
263 Ga0496123_0005501 3300048926 Bacteria 12733
264 Ga0496124_0031980 3300048927 Bacteria 4654
265 Ga0496125_0105760 3300048928 Bacteria 2056
266 Ga0501032_0008124 3300049569 Bacteria 7650
267 Ga0501034_0003658 3300049571 Bacteria 17387
268 Ga0501034_0556778 3300049571 Bacteria 1056
269 Ga0501037_0017378 3300049573 Bacteria 5298
270 Ga0501038_0095963 3300049574 Bacteria 2476
271 Ga0501043_0007982 3300049579 Bacteria 8361
272 Ga0501043_0009522 3300049579 Bacteria 7615
273 Ga0501047_0003592 3300049581 Bacteria 14633
274 Ga0501047_0143254 3300049581 Bacteria 2268
275 Ga0501069_0049040 3300049585 Bacteria 2346
276 Ga0501070_0020219 3300049586 Bacteria 5584
277 Ga0501241_000160 3300049758 Bacteria 15029
278 Ga0501241_005753 3300049758 Bacteria 2301
279 Ga0501035_0027133 3300049822 Bacteria 5236
280 Ga0501044_0003695 3300049823 Bacteria 17203
281 Ga0501044_0144130 3300049823 Unclassified 2369
282 nmdc:mga05p37_173574_c1 3300050507 Bacteria 2627
283 nmdc:mga09592_38895_c1 3300050508 Bacteria 3994
284 Ga0500635_0000305 3300053080 Bacteria 17216
285 Ga0500644_0000567 3300053088 Bacteria 14501
286 Ga0500644_0010460 3300053088 Bacteria 2513
287 Ga0500583_0075273 3300053092 Bacteria 1622
288 Ga0500651_0000444 3300053093 Bacteria 22117
289 Ga0500562_000042 3300053108 Bacteria 67284
290 Ga0500569_001434 3300053109 Bacteria 4495
291 Ga0500608_001218 3300053122 Bacteria 9198
292 Ga0500642_0071944 3300053130 Bacteria 1575
293 Ga0500652_100604 3300053131 Bacteria 1209
294 Ga0500658_0002777 3300053134 Bacteria 6727
295 Ga0500577_0001138 3300053142 Bacteria 6823
296 Ga0500616_0031484 3300053153 Bacteria 2905
297 Ga0500622_0000222 3300053156 Bacteria 59404
298 Ga0500622_0000259 3300053156 Bacteria 53922
299 Ga0500633_0008710 3300053160 Bacteria 2630
300 Ga0500636_0026825 3300053177 Bacteria 3403
301 Ga0501084_0285704 3300054114 Bacteria 1393

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049758 Ga0501241_005753 Ga0501241_005753_904_1758 274
2 3300003323 rootH1_10132040 rootH1_101320402 277
3 3300005336 Ga0070680_100158622 Ga0070680_1001586223 279
4 3300005458 Ga0070681_10084398 Ga0070681_100843983 279
5 3300013104 Ga0157370_10120734 Ga0157370_101207342 281
6 3300005288 Ga0065714_10011471 Ga0065714_100114712 288
7 3300005288 Ga0065714_10070483 Ga0065714_100704832 288
8 3300032004 Ga0307414_10004111 Ga0307414_100041113 291
9 3300013308 Ga0157375_10025077 Ga0157375_100250774 299
10 3300047472 Ga0495686_0002958 Ga0495686_0002958_3669_4628 319
11 3300005336 Ga0070680_100000878 Ga0070680_1000008787 320
12 3300005337 Ga0070682_100002697 Ga0070682_1000026972 320
13 3300005341 Ga0070691_10002969 Ga0070691_100029694 320
14 3300005458 Ga0070681_10034886 Ga0070681_100348864 320
15 3300005530 Ga0070679_100003316 Ga0070679_10000331612 320
16 3300005539 Ga0068853_100041244 Ga0068853_1000412443 320
17 3300005547 Ga0070693_100000650 Ga0070693_1000006505 320
18 3300005563 Ga0068855_100021745 Ga0068855_1000217457 320
19 3300009093 Ga0105240_10002364 Ga0105240_1000236410 320
20 3300009174 Ga0105241_10006161 Ga0105241_100061618 320
21 3300013102 Ga0157371_10003500 Ga0157371_100035002 320
22 3300013104 Ga0157370_10007415 Ga0157370_100074159 320
23 3300013307 Ga0157372_10042697 Ga0157372_100426974 320
24 3300025911 Ga0207654_10094613 Ga0207654_100946132 320
25 3300025912 Ga0207707_10000722 Ga0207707_100007229 320
26 3300025913 Ga0207695_10008010 Ga0207695_100080105 320
27 3300025917 Ga0207660_10122299 Ga0207660_101222992 320
28 3300025921 Ga0207652_10001629 Ga0207652_100016294 320
29 3300026041 Ga0207639_10010277 Ga0207639_100102774 320
30 3300050508 nmdc:mga09592_38895_c1 nmdc:mga09592_38895_c1_277_1239 320
31 3300046665 Ga0495661_0000599 Ga0495661_0000599_21820_22788 321
32 3300047472 Ga0495686_0003411 Ga0495686_0003411_10375_11388 321
33 3300041997 Ga0439431_0026086 Ga0439431_0026086_386_1369 322
34 3300042006 Ga0439432_029392 Ga0439432_029392_741_1724 322
35 3300042134 Ga0450898_016827 Ga0450898_016827_176_1153 322
36 3300053080 Ga0500635_0000305 Ga0500635_0000305_4447_5463 322
37 3300001990 JGI24737J22298_10010207 JGI24737J22298_100102072 323
38 3300002067 JGI24735J21928_10015087 JGI24735J21928_100150872 323
39 3300005288 Ga0065714_10002371 Ga0065714_1000237126 323
40 3300005289 Ga0065704_10000196 Ga0065704_1000019640 323
41 3300005366 Ga0070659_100003474 Ga0070659_10000347410 323
42 3300005577 Ga0068857_100006959 Ga0068857_1000069597 323
43 3300005616 Ga0068852_100384602 Ga0068852_1003846021 323
44 3300013100 Ga0157373_10000133 Ga0157373_1000013323 323
45 3300013100 Ga0157373_10001878 Ga0157373_100018786 323
46 3300013102 Ga0157371_10000984 Ga0157371_1000098420 323
47 3300013102 Ga0157371_10003814 Ga0157371_100038143 323
48 3300013104 Ga0157370_10068787 Ga0157370_100687872 323
49 3300013104 Ga0157370_10089590 Ga0157370_100895902 323
50 3300013307 Ga0157372_10000252 Ga0157372_1000025236 323
51 3300015261 Ga0182006_1001337 Ga0182006_100133712 323
52 3300025261 Ga0209233_1001111 Ga0209233_10011114 323
53 3300025904 Ga0207647_10001313 Ga0207647_100013138 323
54 3300025932 Ga0207690_10082084 Ga0207690_100820842 323
55 3300026116 Ga0207674_10011947 Ga0207674_100119477 323
56 3300031911 Ga0307412_10000004 Ga0307412_10000004207 323
57 3300032004 Ga0307414_10000259 Ga0307414_1000025912 323
58 3300053093 Ga0500651_0000444 Ga0500651_0000444_12131_13150 323
59 3300006028 Ga0070717_10000164 Ga0070717_1000016424 324
60 3300042005 Ga0439448_0009711 Ga0439448_0009711_113_1090 325
61 3300049571 Ga0501034_0556778 Ga0501034_0556778_50_1030 326
62 3300038443 Ga0395901_0060429 Ga0395901_0060429_2344_3366 327
63 3300005288 Ga0065714_10002264 Ga0065714_1000226418 329
64 3300014497 Ga0182008_10000023 Ga0182008_10000023155 329
65 3300047323 Ga0495683_0009140 Ga0495683_0009140_2315_3310 331
66 3300049579 Ga0501043_0007982 Ga0501043_0007982_2653_3648 331
67 3300049823 Ga0501044_0144130 Ga0501044_0144130_587_1582 331
68 3300053122 Ga0500608_001218 Ga0500608_001218_1396_2391 331
69 iso_pu_bacteria 2929154850 2929157242 331
70 3300003322 rootL2_10153797 rootL2_101537972 332
71 3300003323 rootH1_10139120 rootH1_101391208 332
72 3300031731 Ga0307405_10000082 Ga0307405_1000008212 332
73 iso_pu_bacteria 2896085136 2896090029 332
74 3300009093 Ga0105240_10051808 Ga0105240_100518085 333
75 3300010375 Ga0105239_10004499 Ga0105239_100044995 333
76 3300025913 Ga0207695_10042476 Ga0207695_100424765 333
77 3300046462 Ga0495651_0121037 Ga0495651_0121037_193_1197 333
78 3300046529 Ga0495652_0167926 Ga0495652_0167926_415_1419 333
79 3300053130 Ga0500642_0071944 Ga0500642_0071944_300_1301 333
80 iso_pu_bacteria 2818991442 2819574333 333
81 iso_pu_bacteria 2821136567 2821137658 333
82 iso_pu_bacteria 2884933994 2884936881 333
83 iso_pu_bacteria 2904467357 2904467602 333
84 iso_pu_bacteria 2929921140 2929925295 333
85 iso_pu_bacteria 8003151029 8003154211 333
86 3300003320 rootH2_10083939 rootH2_100839391 334
87 3300003320 rootH2_10245453 rootH2_102454532 334
88 3300005354 Ga0070675_100026510 Ga0070675_1000265102 334
89 3300009093 Ga0105240_10000039 Ga0105240_1000003934 334
90 3300009147 Ga0114129_10093204 Ga0114129_100932042 334
91 3300009174 Ga0105241_10006664 Ga0105241_100066642 334
92 3300009545 Ga0105237_10000271 Ga0105237_1000027138 334
93 3300010375 Ga0105239_10001188 Ga0105239_1000118823 334
94 3300013306 Ga0163162_10015516 Ga0163162_1001551610 334
95 3300013306 Ga0163162_10073183 Ga0163162_100731832 334
96 3300013308 Ga0157375_10010019 Ga0157375_100100197 334
97 3300014326 Ga0157380_10286650 Ga0157380_102866502 334
98 3300025911 Ga0207654_10039700 Ga0207654_100397002 334
99 3300025913 Ga0207695_10000058 Ga0207695_10000058172 334
100 3300025914 Ga0207671_10012948 Ga0207671_100129482 334
101 3300025926 Ga0207659_10155401 Ga0207659_101554012 334
102 3300027876 Ga0209974_10035899 Ga0209974_100358992 334
103 3300037312 Ga0395899_0000033 Ga0395899_0000033_149675_150682 334
104 3300046517 Ga0495630_0000003 Ga0495630_0000003_460834_461877 334
105 3300050507 nmdc:mga05p37_173574_c1 nmdc:mga05p37_173574_c1_1130_2134 334
106 3300053156 Ga0500622_0000259 Ga0500622_0000259_51288_52310 334
107 3300005563 Ga0068855_100000122 Ga0068855_10000012287 335
108 3300005563 Ga0068855_100000771 Ga0068855_10000077110 335
109 3300005614 Ga0068856_100013921 Ga0068856_1000139214 335
110 3300005616 Ga0068852_100306653 Ga0068852_1003066532 335
111 3300009093 Ga0105240_10034100 Ga0105240_100341002 335
112 3300009545 Ga0105237_10025511 Ga0105237_100255113 335
113 3300010375 Ga0105239_10000013 Ga0105239_10000013242 335
114 3300015262 Ga0182007_10024338 Ga0182007_100243382 335
115 3300025914 Ga0207671_10014645 Ga0207671_100146453 335
116 3300025949 Ga0207667_10000020 Ga0207667_10000020233 335
117 3300025949 Ga0207667_10001880 Ga0207667_1000188013 335
118 3300026078 Ga0207702_10111735 Ga0207702_101117352 335
119 3300026142 Ga0207698_10222068 Ga0207698_102220682 335
120 3300032004 Ga0307414_10081278 Ga0307414_100812782 335
121 iso_pu_bacteria 2522125168 2522552134 335
122 iso_pu_bacteria 2738541283 2738754412 335
123 iso_pu_bacteria 2738541284 2738763078 335
124 iso_pu_bacteria 2738543023 2739301833 335
125 iso_pu_bacteria 2775506987 2776614708 335
126 iso_pu_bacteria 2818991444 2819586614 335
127 iso_pu_bacteria 2842903701 2842905345 335
128 iso_pu_bacteria 2852623160 2852624202 335
129 iso_pu_bacteria 2852627209 2852627758 335
130 iso_pu_bacteria 2895498888 2895501625 335
131 iso_pu_bacteria 2919186247 2919187959 335
132 iso_pu_bacteria 2939664404 2939664774 335
133 3300002737 JGI25162J39368_1003771 JGI25162J39368_10037713 336
134 3300003214 JGI25165J46597_1000620 JGI25165J46597_10006206 336
135 3300003323 rootH1_10002605 rootH1_1000260533 336
136 3300003323 rootH1_10065577 rootH1_100655775 336
137 3300009545 Ga0105237_10002306 Ga0105237_100023062 336
138 3300025231 Ga0207427_100106 Ga0207427_10010660 336
139 3300025233 Ga0209437_100226 Ga0209437_10022659 336
140 3300025261 Ga0209233_1000089 Ga0209233_100008959 336
141 3300025912 Ga0207707_10066328 Ga0207707_100663282 336
142 3300025914 Ga0207671_10017641 Ga0207671_100176418 336
143 3300025917 Ga0207660_10076990 Ga0207660_100769902 336
144 3300028800 Ga0265338_10047968 Ga0265338_100479683 336
145 3300049569 Ga0501032_0008124 Ga0501032_0008124_6210_7220 336
146 3300049571 Ga0501034_0003658 Ga0501034_0003658_11019_12029 336
147 3300049573 Ga0501037_0017378 Ga0501037_0017378_1896_2906 336
148 3300049574 Ga0501038_0095963 Ga0501038_0095963_775_1785 336
149 3300049579 Ga0501043_0009522 Ga0501043_0009522_6377_7387 336
150 3300049581 Ga0501047_0003592 Ga0501047_0003592_1613_2623 336
151 3300049822 Ga0501035_0027133 Ga0501035_0027133_2370_3380 336
152 3300049823 Ga0501044_0003695 Ga0501044_0003695_15878_16888 336
153 3300002738 JGI25154J39366_1000041 JGI25154J39366_100004132 337
154 3300003215 JGI25153J46596_10003758 JGI25153J46596_100037585 337
155 3300003316 rootH1_10075993 rootH1_100759932 337
156 3300003322 rootL2_10010105 rootL2_100101052 337
157 3300003323 rootH1_10157522 rootH1_101575223 337
158 3300003323 rootH1_10186168 rootH1_101861683 337
159 3300005262 Ga0065165_1017890 Ga0065165_10178901 337
160 3300005262 Ga0065165_1026913 Ga0065165_10269131 337
161 3300010375 Ga0105239_10000002 Ga0105239_10000002245 337
162 3300013296 Ga0157374_10001854 Ga0157374_100018547 337
163 3300014326 Ga0157380_10179364 Ga0157380_101793642 337
164 3300015265 Ga0182005_1000645 Ga0182005_10006453 337
165 3300025246 Ga0209646_1000122 Ga0209646_100012233 337
166 3300025250 Ga0209026_1000329 Ga0209026_100032948 337
167 3300025297 Ga0209758_1056352 Ga0209758_10563522 337
168 3300025302 Ga0207426_1000530 Ga0207426_100053013 337
169 3300032004 Ga0307414_10025143 Ga0307414_100251431 337
170 3300046459 Ga0495629_0136043 Ga0495629_0136043_317_1330 337
171 3300046558 Ga0495633_0000039 Ga0495633_0000039_64666_65682 337
172 3300048924 Ga0496121_0000007 Ga0496121_0000007_17839_18855 337
173 3300049581 Ga0501047_0143254 Ga0501047_0143254_363_1376 337
174 3300049585 Ga0501069_0049040 Ga0501069_0049040_150_1163 337
175 3300049586 Ga0501070_0020219 Ga0501070_0020219_3268_4281 337
176 3300053088 Ga0500644_0010460 Ga0500644_0010460_543_1556 337
177 3300053131 Ga0500652_100604 Ga0500652_100604_185_1198 337
178 3300053156 Ga0500622_0000222 Ga0500622_0000222_54673_55689 337
179 3300054114 Ga0501084_0285704 Ga0501084_0285704_262_1275 337
180 3300003762 Ga0055542_1001478 Ga0055542_10014782 338
181 3300009093 Ga0105240_10430670 Ga0105240_104306702 338
182 3300013297 Ga0157378_10035152 Ga0157378_100351523 338
183 3300025242 Ga0209258_100160 Ga0209258_10016048 338
184 3300025254 Ga0209148_1000153 Ga0209148_100015378 338
185 3300025304 Ga0209257_1000001 Ga0209257_1000001596 338
186 3300025949 Ga0207667_10390413 Ga0207667_103904132 338
187 3300030521 Ga0307511_10000754 Ga0307511_100007548 338
188 3300032004 Ga0307414_10048767 Ga0307414_100487671 338
189 3300032004 Ga0307414_10256539 Ga0307414_102565391 338
190 3300032005 Ga0307411_10391137 Ga0307411_103911371 338
191 3300037418 Ga0395900_0000314 Ga0395900_0000314_1370_2392 338
192 3300046507 Ga0495606_0015880 Ga0495606_0015880_2320_3336 338
193 3300048904 Ga0496101_0351054 Ga0496101_0351054_106_1125 338
194 3300049758 Ga0501241_000160 Ga0501241_000160_11680_12699 338
195 3300053088 Ga0500644_0000567 Ga0500644_0000567_7343_8362 338
196 3300053092 Ga0500583_0075273 Ga0500583_0075273_266_1285 338
197 3300053109 Ga0500569_001434 Ga0500569_001434_493_1512 338
198 3300053134 Ga0500658_0002777 Ga0500658_0002777_5656_6675 338
199 3300053142 Ga0500577_0001138 Ga0500577_0001138_3290_4309 338
200 3300053153 Ga0500616_0031484 Ga0500616_0031484_1139_2158 338
201 3300053160 Ga0500633_0008710 Ga0500633_0008710_728_1747 338
202 3300053177 Ga0500636_0026825 Ga0500636_0026825_1115_2134 338
203 3300003320 rootH2_10038714 rootH2_1003871413 339
204 3300003323 rootH1_10023683 rootH1_100236834 339
205 3300003323 rootH1_10295033 rootH1_102950333 339
206 3300003781 Ga0055536_1012794 Ga0055536_10127942 339
207 3300005262 Ga0065165_1000501 Ga0065165_100050115 339
208 3300005288 Ga0065714_10137257 Ga0065714_101372571 339
209 3300005289 Ga0065704_10089498 Ga0065704_100894982 339
210 3300005338 Ga0068868_100345439 Ga0068868_1003454391 339
211 3300005339 Ga0070660_100043550 Ga0070660_1000435502 339
212 3300005355 Ga0070671_100045651 Ga0070671_1000456513 339
213 3300005364 Ga0070673_100045973 Ga0070673_1000459731 339
214 3300005367 Ga0070667_100020264 Ga0070667_1000202643 339
215 3300005459 Ga0068867_100007171 Ga0068867_1000071713 339
216 3300005539 Ga0068853_100104776 Ga0068853_1001047762 339
217 3300005543 Ga0070672_100013427 Ga0070672_1000134273 339
218 3300005548 Ga0070665_100000125 Ga0070665_100000125136 339
219 3300005563 Ga0068855_100017149 Ga0068855_1000171496 339
220 3300005563 Ga0068855_100163578 Ga0068855_1001635782 339
221 3300005614 Ga0068856_100003241 Ga0068856_1000032413 339
222 3300005616 Ga0068852_100000507 Ga0068852_10000050714 339
223 3300005834 Ga0068851_10133285 Ga0068851_101332852 339
224 3300006237 Ga0097621_100000542 Ga0097621_1000005423 339
225 3300006358 Ga0068871_100003155 Ga0068871_10000315512 339
226 3300009174 Ga0105241_10015041 Ga0105241_100150413 339
227 3300009176 Ga0105242_10041375 Ga0105242_100413753 339
228 3300009545 Ga0105237_10001802 Ga0105237_1000180221 339
229 3300010375 Ga0105239_10037711 Ga0105239_100377112 339
230 3300010375 Ga0105239_10127867 Ga0105239_101278672 339
231 3300010375 Ga0105239_10309277 Ga0105239_103092771 339
232 3300013100 Ga0157373_10003326 Ga0157373_100033265 339
233 3300013102 Ga0157371_10000806 Ga0157371_100008064 339
234 3300013104 Ga0157370_10003204 Ga0157370_1000320411 339
235 3300013104 Ga0157370_10060228 Ga0157370_100602282 339
236 3300013296 Ga0157374_10003425 Ga0157374_100034258 339
237 3300013297 Ga0157378_10129654 Ga0157378_101296542 339
238 3300013306 Ga0163162_10000005 Ga0163162_1000000510 339
239 3300013308 Ga0157375_10001653 Ga0157375_100016536 339
240 3300014325 Ga0163163_10066893 Ga0163163_100668932 339
241 3300014497 Ga0182008_10000465 Ga0182008_100004658 339
242 3300014745 Ga0157377_10256472 Ga0157377_102564721 339
243 3300014969 Ga0157376_10102709 Ga0157376_101027092 339
244 3300017792 Ga0163161_10002638 Ga0163161_100026384 339
245 3300017792 Ga0163161_10003730 Ga0163161_1000373012 339
246 3300021361 Ga0213872_10012905 Ga0213872_100129051 339
247 3300025250 Ga0209026_1002004 Ga0209026_10020047 339
248 3300025292 Ga0209676_1001044 Ga0209676_100104426 339
249 3300025321 Ga0207656_10026822 Ga0207656_100268222 339
250 3300025903 Ga0207680_10028557 Ga0207680_100285572 339
251 3300025907 Ga0207645_10000741 Ga0207645_1000074117 339
252 3300025909 Ga0207705_10009530 Ga0207705_100095305 339
253 3300025913 Ga0207695_10030768 Ga0207695_100307682 339
254 3300025914 Ga0207671_10018806 Ga0207671_100188062 339
255 3300025914 Ga0207671_10019473 Ga0207671_100194732 339
256 3300025919 Ga0207657_10078697 Ga0207657_100786974 339
257 3300025924 Ga0207694_10041010 Ga0207694_100410102 339
258 3300025931 Ga0207644_10035582 Ga0207644_100355822 339
259 3300025933 Ga0207706_10123101 Ga0207706_101231013 339
260 3300025934 Ga0207686_10154211 Ga0207686_101542112 339
261 3300025938 Ga0207704_10000023 Ga0207704_10000023102 339
262 3300025938 Ga0207704_10013755 Ga0207704_100137552 339
263 3300025940 Ga0207691_10018652 Ga0207691_100186523 339
264 3300025960 Ga0207651_10019372 Ga0207651_100193722 339
265 3300025972 Ga0207668_10001832 Ga0207668_100018323 339
266 3300026023 Ga0207677_10174734 Ga0207677_101747342 339
267 3300026023 Ga0207677_10291823 Ga0207677_102918232 339
268 3300026041 Ga0207639_10016520 Ga0207639_100165202 339
269 3300026041 Ga0207639_10100381 Ga0207639_101003812 339
270 3300026089 Ga0207648_10000849 Ga0207648_1000084912 339
271 3300026142 Ga0207698_10073128 Ga0207698_100731282 339
272 3300028379 Ga0268266_10000132 Ga0268266_10000132122 339
273 3300028381 Ga0268264_10065069 Ga0268264_100650692 339
274 3300028786 Ga0307517_10000929 Ga0307517_1000092926 339
275 3300030731 Ga0316177_1116921 Ga0316177_111692124 339
276 3300030742 Ga0316183_1115944 Ga0316183_11159443 339
277 3300030744 Ga0316181_1154881 Ga0316181_11548813 339
278 3300031730 Ga0307516_10005977 Ga0307516_100059776 339
279 3300031731 Ga0307405_10016703 Ga0307405_100167032 339
280 3300031911 Ga0307412_10157244 Ga0307412_101572441 339
281 3300032004 Ga0307414_10000961 Ga0307414_100009616 339
282 3300032004 Ga0307414_10003898 Ga0307414_100038986 339
283 3300033180 Ga0307510_10001509 Ga0307510_100015093 339
284 3300037312 Ga0395899_0067092 Ga0395899_0067092_24_1043 339
285 3300037418 Ga0395900_0007748 Ga0395900_0007748_8463_9482 339
286 3300037418 Ga0395900_0109662 Ga0395900_0109662_782_1807 339
287 3300037466 Ga0395898_0003293 Ga0395898_0003293_8463_9482 339
288 3300037466 Ga0395898_0101552 Ga0395898_0101552_601_1626 339
289 3300037471 Ga0395905_0002656 Ga0395905_0002656_9769_10788 339
290 3300037471 Ga0395905_0003201 Ga0395905_0003201_10415_11440 339
291 3300038443 Ga0395901_0000343 Ga0395901_0000343_46541_47560 339
292 3300038443 Ga0395901_0002911 Ga0395901_0002911_9844_10869 339
293 3300039447 Ga0436361_0750597 Ga0436361_0750597_4258_5334 339
294 3300042011 Ga0439454_006141 Ga0439454_006141_225_1247 339
295 3300046538 Ga0495609_0032348 Ga0495609_0032348_705_1724 339
296 3300046616 Ga0495668_0000459 Ga0495668_0000459_24060_25079 339
297 3300046665 Ga0495661_0050270 Ga0495661_0050270_633_1661 339
298 3300048912 Ga0496109_0172437 Ga0496109_0172437_254_1288 339
299 3300048925 Ga0496122_0000804 Ga0496122_0000804_23719_24738 339
300 3300048926 Ga0496123_0005501 Ga0496123_0005501_7315_8334 339
301 3300048927 Ga0496124_0031980 Ga0496124_0031980_545_1573 339
302 3300048928 Ga0496125_0105760 Ga0496125_0105760_677_1696 339
303 3300053108 Ga0500562_000042 Ga0500562_000042_3563_4642 339
304 3300001904 JGI24736J21556_1001588 JGI24736J21556_10015883 340
305 3300001990 JGI24737J22298_10001640 JGI24737J22298_100016406 340
306 3300005366 Ga0070659_100195376 Ga0070659_1001953762 340
307 3300005457 Ga0070662_100000246 Ga0070662_10000024610 340
308 3300009093 Ga0105240_10021668 Ga0105240_100216684 340
309 3300009174 Ga0105241_10001741 Ga0105241_100017417 340
310 3300011119 Ga0105246_10316560 Ga0105246_103165601 340
311 3300013100 Ga0157373_10049937 Ga0157373_100499372 340
312 3300013102 Ga0157371_10038045 Ga0157371_100380452 340
313 3300013296 Ga0157374_10001869 Ga0157374_100018698 340
314 3300013307 Ga0157372_10012648 Ga0157372_100126487 340
315 3300014745 Ga0157377_10094485 Ga0157377_100944851 340
316 3300015262 Ga0182007_10043718 Ga0182007_100437181 340
317 3300025904 Ga0207647_10001525 Ga0207647_100015258 340
318 3300025911 Ga0207654_10002660 Ga0207654_100026606 340
319 3300025932 Ga0207690_10035190 Ga0207690_100351902 340
320 3300025933 Ga0207706_10000858 Ga0207706_100008587 340
321 3300026023 Ga0207677_10093546 Ga0207677_100935462 340

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02322

Cyt_bd_oxida_II

Cytochrome bd terminal oxidase subunit II

15

343

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
8b4o-assembly1.cif.gz_B cryo-em structure of cytochrome bd oxidase from c. glutamicum 0.8384 3 330
7nkz-assembly1.cif.gz_B cryo-em structure of the cytochrome bd oxidase from m. tuberculosis at 2.5 a resolution 0.8372 3 331
7d5i-assembly1.cif.gz_B structure of mycobacterium smegmatis bd complex in the apo-form. 0.8184 2 331
8b4o-assembly1.cif.gz_B cryo-em structure of cytochrome bd oxidase from c. glutamicum 0.8056 3 330
7nkz-assembly1.cif.gz_B cryo-em structure of the cytochrome bd oxidase from m. tuberculosis at 2.5 a resolution 0.7893 3 331
ID Description Score Start End Superfamily
af_A0A1D6EHA9_477_585_1.20.58.390 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.6269 128 221 1.20.58.390
af_P76173_1_274_1.20.1630.10 Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain 0.5964 12 275 1.20.1630.10
af_Q3U2S8_86_214_1.20.120.350 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Voltage-gated potassium channels. Chain C 0.5743 162 279 1.20.120.350
af_P76173_1_274_1.20.1630.10 Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain 0.5601 12 275 1.20.1630.10
af_A0A0R0JZJ1_441_551_1.20.58.390 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.5458 125 221 1.20.58.390
ID Description Score Start End GO Terms
AF-A0A1N7I5J2-F1-model_v4 Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein 0.9829 1 334 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0070069
AF-A0A4Q6E9J5-F1-model_v4 Cytochrome d ubiquinol oxidase subunit II 0.9828 1 338 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0070069
AF-A0A2V2ZTA8-F1-model_v4 Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein 0.9825 1 334 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0070069
AF-A0A6G6YKU7-F1-model_v4 Cytochrome d ubiquinol oxidase subunit II 0.9808 1 332 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0070069
AF-A0A4Q6E9J5-F1-model_v4 Cytochrome d ubiquinol oxidase subunit II 0.9799 1 338 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0070069

Feature Viewer

pLDDT pTM Quality
89.76 0.89 High
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Predicted Structure (AlphaFold2)

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Map