F406046

General Info

Members Datasets Scaffolds Average Seq Length
321 220 316 353

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10175030|Ga0316576_101750302
Length 408
Sequence LTRKAAWTGSRSALPTECISFCFSRRAEPAQAGSAFFASAPDPRTKAAMIDHSYLEQLQARLGDLETRMSQPEVSADPNKMKECMREYSHKKKLADCATGLLSLSDARAESEAILADPASDDELREMAQMELADLEEKLPAAEREMMIALIPPDPTDSRNVIMEIRAGTGGDEAGIFCGDLYRMYTRYFDNVGWKYGVLDVSPSESGGYKEISFSVEGDDVYKTLKHEGGTHRVQRVPTTETQGRVHTSAATVAVLAEAEEVDIEVRTEDLRIDTYRSSGAGGQHVNTTDSAIRITHIPSGIVVQCQDERSQHKNKAAAMKMLRAKLFDQEQRRKAEAEASERKSMVGSGDRSEKIRTYNFPQNRLTDHRINLTLYKLDRIMEGDLEEILDALGEHDVETRIEQQMAN

Samples

Sample ID Description Type Environment
1 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
2 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
3 2734482258 Glomeribacter sp. phylotype 3 Isolate Unclassified
4 2831864461 Roseateles noduli HZ7 Isolate Nodule
5 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
6 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
12 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
13 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
47 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
48 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
49 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
50 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
56 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
71 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
82 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
83 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
84 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
112 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
113 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
114 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
115 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
116 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
117 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
118 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
119 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
120 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
121 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
122 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
123 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
124 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
125 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
126 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
127 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
128 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
129 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
130 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
131 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
132 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
133 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
134 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
135 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
136 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
137 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
138 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
139 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
140 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
141 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
142 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
143 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
144 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
145 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
146 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
147 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
148 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
149 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
150 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
151 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
152 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
153 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
154 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
155 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
156 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
157 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
158 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
159 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
160 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
161 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
162 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
163 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
164 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
165 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
166 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
167 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
168 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
169 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
170 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
171 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
172 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
173 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
174 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
175 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
176 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
177 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
178 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
185 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
186 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
187 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
188 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
189 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
190 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
191 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
192 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
193 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
194 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
195 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
196 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
197 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
198 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
199 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
200 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
201 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
202 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
203 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
204 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
205 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
206 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
207 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
208 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
209 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
210 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
211 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
212 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
213 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
214 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
215 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
216 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
217 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
218 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
219 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
220 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.13
Metatranscriptomes 0.31
Isolates 1.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.25
Nodule 0.31
Rhizoplane 0
Rhizosphere 73.21
Stem 0
Stem Tuber 0
Unclassified 6.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10002781 3300001979 Bacteria 7830
2 rootH1_10023981 3300003316 Bacteria 29521
3 rootH2_10000659 3300003320 Bacteria 146718
4 Ga0055524_1001765 3300003775 Bacteria 11916
5 Ga0055531_10003195 3300003794 Bacteria 10521
6 Ga0055543_1001329 3300004625 Bacteria 10110
7 Ga0058862_12673859 3300004803 Bacteria 1389
8 Ga0065165_1000016 3300005262 Bacteria 286248
9 Ga0065165_1001026 3300005262 Bacteria 33855
10 Ga0065704_10074192 3300005289 Bacteria 6449
11 Ga0070658_10031872 3300005327 Bacteria 4235
12 Ga0070658_10108921 3300005327 Bacteria 2293
13 Ga0070658_10215263 3300005327 Bacteria 1624
14 Ga0070658_10251032 3300005327 Bacteria 1501
15 Ga0070683_100079056 3300005329 Bacteria 3077
16 Ga0070670_100000854 3300005331 Bacteria 23855
17 Ga0070680_100001696 3300005336 Bacteria 16156
18 Ga0070660_100000099 3300005339 Bacteria 52371
19 Ga0070689_100082350 3300005340 Bacteria 2527
20 Ga0070675_100139834 3300005354 Bacteria 2069
21 Ga0070674_100016645 3300005356 Bacteria 4612
22 Ga0070714_100102620 3300005435 Bacteria 2522
23 Ga0070713_100336402 3300005436 Bacteria 1398
24 Ga0070700_100005604 3300005441 Bacteria 6656
25 Ga0070663_100051896 3300005455 Bacteria 2923
26 Ga0070681_10046987 3300005458 Bacteria 4316
27 Ga0068867_100001947 3300005459 Bacteria 14386
28 Ga0068867_100050421 3300005459 Bacteria 3067
29 Ga0070685_10091974 3300005466 Bacteria 1837
30 Ga0070698_100011341 3300005471 Bacteria 9465
31 Ga0070684_100027587 3300005535 Bacteria 4795
32 Ga0070672_100021995 3300005543 Bacteria 4676
33 Ga0070695_100017947 3300005545 Bacteria 4293
34 Ga0070696_100000629 3300005546 Bacteria 22520
35 Ga0070696_100002643 3300005546 Bacteria 11882
36 Ga0070704_100117435 3300005549 Bacteria 2036
37 Ga0068855_100000364 3300005563 Bacteria 56128
38 Ga0068855_100019687 3300005563 Bacteria 8104
39 Ga0068855_100071209 3300005563 Bacteria 4044
40 Ga0068855_100131683 3300005563 Bacteria 2856
41 Ga0068857_100000084 3300005577 Bacteria 54402
42 Ga0068857_100018098 3300005577 Bacteria 6180
43 Ga0068857_100125569 3300005577 Bacteria 2312
44 Ga0068856_100235532 3300005614 Bacteria 1846
45 Ga0068852_100000051 3300005616 Bacteria 81538
46 Ga0068859_100034103 3300005617 Bacteria 5110
47 Ga0068859_100037062 3300005617 Bacteria 4894
48 Ga0068859_100509098 3300005617 Bacteria 1299
49 Ga0068870_10064926 3300005840 Bacteria 1973
50 Ga0068860_100002278 3300005843 Bacteria 20163
51 Ga0068862_100009207 3300005844 Bacteria 8179
52 Ga0068862_100234803 3300005844 Bacteria 1665
53 Ga0081455_10000006 3300005937 Bacteria 323066
54 Ga0075365_10000003 3300006038 Bacteria 203750
55 Ga0075365_10000091 3300006038 Bacteria 26191
56 Ga0075365_10000465 3300006038 Bacteria 15218
57 Ga0075365_10002813 3300006038 Bacteria 8712
58 Ga0075368_10001015 3300006042 Bacteria 8783
59 Ga0075363_100003244 3300006048 Bacteria 6877
60 Ga0075364_10000244 3300006051 Bacteria 26177
61 Ga0075364_10000339 3300006051 Bacteria 23276
62 Ga0075364_10218335 3300006051 Bacteria 1293
63 Ga0075367_10000110 3300006178 Bacteria 23417
64 Ga0075366_10006711 3300006195 Bacteria 6320
65 Ga0097621_100000001 3300006237 Bacteria 632268
66 Ga0075370_10006644 3300006353 Bacteria 5833
67 Ga0075370_10007906 3300006353 Bacteria 5441
68 Ga0068871_100000005 3300006358 Bacteria 123210
69 Ga0075428_100272229 3300006844 Bacteria 1822
70 Ga0075430_100246729 3300006846 Bacteria 1480
71 Ga0075431_100125653 3300006847 Bacteria 2646
72 Ga0075433_10074904 3300006852 Bacteria 2979
73 Ga0068865_100003755 3300006881 Bacteria 9115
74 Ga0097620_100034103 3300006931 Bacteria 5110
75 Ga0097620_100037063 3300006931 Bacteria 4894
76 Ga0097620_100509086 3300006931 Bacteria 1299
77 Ga0075435_100019251 3300007076 Bacteria 5209
78 Ga0105240_10000004 3300009093 Bacteria 708156
79 Ga0105240_10004061 3300009093 Bacteria 22519
80 Ga0111539_10005167 3300009094 Bacteria 16917
81 Ga0111539_10073922 3300009094 Bacteria 4017
82 Ga0111539_10495502 3300009094 Bacteria 1423
83 Ga0105247_10108308 3300009101 Bacteria 1785
84 Ga0114129_10351959 3300009147 Bacteria 1951
85 Ga0105243_10045302 3300009148 Bacteria 3456
86 Ga0105241_10181398 3300009174 Bacteria 1747
87 Ga0105237_10000002 3300009545 Bacteria 702357
88 Ga0105237_10000488 3300009545 Bacteria 56363
89 Ga0105238_10000667 3300009551 Bacteria 36055
90 Ga0105238_10002583 3300009551 Bacteria 18043
91 Ga0105249_10098477 3300009553 Bacteria 2746
92 Ga0105032_100003 3300009979 Bacteria 186985
93 Ga0105032_100022 3300009979 Bacteria 40670
94 Ga0157319_1000015 3300012497 Bacteria 130857
95 Ga0157370_10000706 3300013104 Bacteria 41789
96 Ga0157370_10004744 3300013104 Bacteria 15486
97 Ga0157369_10000024 3300013105 Bacteria 225851
98 Ga0157369_10001762 3300013105 Bacteria 26232
99 Ga0157369_10003979 3300013105 Bacteria 17524
100 Ga0157369_10029207 3300013105 Bacteria 6095
101 Ga0157378_10008083 3300013297 Bacteria 9182
102 Ga0163162_10069852 3300013306 Bacteria 3564
103 Ga0157372_10000002 3300013307 Bacteria 687862
104 Ga0157372_10000008 3300013307 Bacteria 305449
105 Ga0157372_10020496 3300013307 Bacteria 7135
106 Ga0157372_10094262 3300013307 Bacteria 3409
107 Ga0157380_10002989 3300014326 Bacteria 11515
108 Ga0157379_10002810 3300014968 Bacteria 14675
109 Ga0157379_10114644 3300014968 Bacteria 2422
110 Ga0157376_10019116 3300014969 Bacteria 5272
111 Ga0163161_10036923 3300017792 Bacteria 3501
112 Ga0163161_10058075 3300017792 Bacteria 2812
113 Ga0213872_10000786 3300021361 Bacteria 23223
114 Ga0213872_10001156 3300021361 Bacteria 17967
115 Ga0213876_10017662 3300021384 Bacteria 3763
116 Ga0213871_10001783 3300021441 Bacteria 3750
117 Ga0209673_1009065 3300025273 Bacteria 4355
118 Ga0209564_1000008 3300025295 Bacteria 953227
119 Ga0209256_1002723 3300025299 Bacteria 13697
120 Ga0209257_1000830 3300025304 Bacteria 44620
121 Ga0207710_10063217 3300025900 Bacteria 1683
122 Ga0207705_10015073 3300025909 Bacteria 5556
123 Ga0207705_10071580 3300025909 Bacteria 2514
124 Ga0207654_10110356 3300025911 Bacteria 1710
125 Ga0207707_10174173 3300025912 Bacteria 1880
126 Ga0207695_10000009 3300025913 Bacteria 1034276
127 Ga0207695_10032090 3300025913 Bacteria 5752
128 Ga0207671_10000003 3300025914 Bacteria 1065461
129 Ga0207671_10000008 3300025914 Bacteria 798229
130 Ga0207660_10004342 3300025917 Bacteria 9239
131 Ga0207657_10001608 3300025919 Bacteria 24283
132 Ga0207694_10009336 3300025924 Bacteria 7399
133 Ga0207694_10013896 3300025924 Bacteria 6070
134 Ga0207650_10008838 3300025925 Bacteria 6883
135 Ga0207704_10001487 3300025938 Bacteria 10503
136 Ga0207661_10148293 3300025944 Bacteria 2026
137 Ga0207679_10039458 3300025945 Bacteria 3372
138 Ga0207667_10000434 3300025949 Bacteria 56114
139 Ga0207667_10072672 3300025949 Bacteria 3575
140 Ga0207712_10069883 3300025961 Bacteria 2521
141 Ga0207658_10002292 3300025986 Bacteria 14132
142 Ga0207708_10019733 3300026075 Bacteria 5083
143 Ga0207648_10004727 3300026089 Bacteria 13908
144 Ga0207648_10041035 3300026089 Bacteria 4065
145 Ga0207648_10111750 3300026089 Bacteria 2399
146 Ga0207674_10002117 3300026116 Bacteria 25105
147 Ga0207674_10114941 3300026116 Bacteria 2663
148 Ga0207698_10000022 3300026142 Bacteria 131985
149 Ga0207698_10005688 3300026142 Bacteria 7720
150 Ga0207428_10007441 3300027907 Bacteria 9983
151 Ga0207428_10018356 3300027907 Bacteria 5977
152 Ga0268265_10054767 3300028380 Bacteria 3028
153 Ga0268264_10021880 3300028381 Bacteria 5219
154 Ga0307515_10007796 3300028794 Bacteria 21069
155 Ga0307515_10009311 3300028794 Bacteria 19001
156 Ga0265338_10297050 3300028800 Bacteria 1175
157 Ga0316179_1024327 3300030734 Bacteria 28090
158 Ga0316180_1026277 3300030736 Bacteria 4114
159 Ga0316183_1010007 3300030742 Bacteria 20400
160 Ga0316183_1056756 3300030742 Bacteria 10430
161 Ga0316183_1115939 3300030742 Bacteria 3153
162 Ga0316183_1153294 3300030742 Bacteria 5824
163 Ga0316181_1063761 3300030744 Bacteria 284591
164 Ga0316181_1140104 3300030744 Bacteria 1216
165 Ga0316182_1030052 3300030745 Bacteria 42417
166 Ga0316182_1039048 3300030745 Bacteria 11178
167 Ga0316182_1082434 3300030745 Bacteria 7429
168 Ga0316182_1172812 3300030745 Bacteria 50125
169 Ga0316182_1308397 3300030745 Bacteria 2046
170 Ga0265331_10001696 3300031250 Bacteria 15889
171 Ga0265327_10000179 3300031251 Bacteria 135005
172 Ga0265327_10008098 3300031251 Bacteria 7913
173 Ga0265316_10000055 3300031344 Bacteria 122834
174 Ga0307513_10010732 3300031456 Bacteria 11453
175 Ga0307509_10000054 3300031507 Bacteria 163301
176 Ga0307509_10007551 3300031507 Bacteria 14172
177 Ga0307509_10024723 3300031507 Bacteria 6722
178 Ga0307408_100031081 3300031548 Bacteria 3714
179 Ga0307514_10086174 3300031649 Bacteria 2306
180 Ga0265342_10063803 3300031712 Bacteria 2164
181 Ga0316576_10175030 3300031727 Bacteria 1619
182 Ga0307516_10013442 3300031730 Bacteria 8723
183 Ga0307405_10053580 3300031731 Bacteria 2514
184 Ga0307406_10065450 3300031901 Bacteria 2362
185 Ga0307412_10196814 3300031911 Bacteria 1527
186 Ga0307416_100004923 3300032002 Bacteria 8133
187 Ga0307414_10143452 3300032004 Bacteria 1873
188 Ga0316583_10000335 3300032133 Bacteria 13327
189 Ga0316583_10000564 3300032133 Bacteria 11232
190 Ga0373959_0000383 3300034820 Bacteria 8746
191 Ga0373939_0008825 3300035114 Bacteria 2483
192 Ga0373935_0015646 3300035692 Bacteria 4588
193 Ga0316582_0012093 3300036647 Bacteria 4804
194 Ga0316582_0049635 3300036647 Bacteria 2655
195 Ga0316582_0062639 3300036647 Bacteria 2389
196 Ga0316582_0303469 3300036647 Bacteria 1097
197 Ga0395900_0058644 3300037418 Bacteria 3963
198 Ga0395900_0069233 3300037418 Bacteria 3627
199 Ga0395898_0023392 3300037466 Bacteria 6246
200 Ga0316581_0021208 3300037588 Bacteria 1907
201 Ga0436364_0545736 3300037853 Bacteria 12413
202 Ga0436364_0885252 3300037853 Bacteria 5894
203 Ga0400489_51740 3300039093 Bacteria 7964
204 Ga0400487_55110 3300039110 Bacteria 3551
205 Ga0436365_0579469 3300039437 Bacteria 7602
206 Ga0436360_0552269 3300039438 Bacteria 14440
207 Ga0436361_0630570 3300039447 Bacteria 48113
208 Ga0436361_0659667 3300039447 Bacteria 30667
209 Ga0439438_026467 3300041405 Bacteria 1572
210 Ga0439447_021170 3300041407 Bacteria 1716
211 Ga0439432_001021 3300042006 Bacteria 10592
212 Ga0439432_015254 3300042006 Bacteria 2595
213 Ga0439463_031526 3300042016 Bacteria 1338
214 Ga0450920_000342 3300042122 Bacteria 7137
215 Ga0450903_008326 3300042138 Bacteria 1697
216 Ga0450906_004627 3300042145 Bacteria 2871
217 Ga0439446_0000005 3300042156 Bacteria 101649
218 Ga0439446_0000771 3300042156 Bacteria 6754
219 Ga0439434_0010507 3300042435 Bacteria 2728
220 Ga0439459_0001818 3300042438 Bacteria 3212
221 Ga0466969_0000008 3300044656 Bacteria 139607
222 Ga0466965_0000073 3300044683 Bacteria 29903
223 Ga0466966_0097032 3300044684 Bacteria 1825
224 Ga0453684_0197187 3300044712 Bacteria 2350
225 Ga0451576_0006230 3300045051 Bacteria 14690
226 Ga0451576_0039062 3300045051 Bacteria 5024
227 Ga0451576_0044799 3300045051 Bacteria 4661
228 Ga0451576_0154586 3300045051 Bacteria 2393
229 Ga0466958_0068348 3300045836 Bacteria 2172
230 Ga0495638_0000108 3300046460 Bacteria 132914
231 Ga0495638_0000173 3300046460 Bacteria 100531
232 Ga0495638_0127445 3300046460 Bacteria 1499
233 Ga0495580_0000388 3300046472 Bacteria 36163
234 Ga0495582_0019361 3300046473 Bacteria 3721
235 Ga0495630_0074994 3300046517 Bacteria 2549
236 Ga0495632_0106717 3300046519 Bacteria 1317
237 Ga0495643_0034891 3300046522 Bacteria 2772
238 Ga0495597_0012417 3300046542 Bacteria 4110
239 Ga0495667_0129844 3300046559 Bacteria 1626
240 Ga0495625_0003495 3300046660 Bacteria 15582
241 Ga0495588_0110615 3300046674 Bacteria 1447
242 Ga0495613_0051757 3300046689 Bacteria 3026
243 Ga0495660_0000035 3300046810 Bacteria 199140
244 Ga0495602_0172729 3300048088 Bacteria 1676
245 Ga0496124_0001458 3300048927 Bacteria 34900
246 Ga0496125_0041797 3300048928 Bacteria 3914
247 Ga0501033_0014030 3300049570 Bacteria 6096
248 Ga0501033_0051684 3300049570 Bacteria 3046
249 Ga0501033_0172629 3300049570 Bacteria 1552
250 Ga0501034_0162638 3300049571 Bacteria 2202
251 Ga0501034_0351584 3300049571 Bacteria 1402
252 Ga0501036_0099697 3300049572 Bacteria 2457
253 Ga0501043_0003937 3300049579 Bacteria 12179
254 Ga0501043_0025458 3300049579 Bacteria 4642
255 Ga0501046_0002443 3300049580 Bacteria 17416
256 Ga0501046_0137082 3300049580 Bacteria 1853
257 Ga0501047_0012022 3300049581 Bacteria 8192
258 Ga0501047_0027422 3300049581 Bacteria 5487
259 Ga0501047_0102850 3300049581 Bacteria 2736
260 Ga0501070_0009517 3300049586 Bacteria 8212
261 Ga0501073_0043790 3300049589 Bacteria 3156
262 Ga0501198_000012 3300049649 Bacteria 113529
263 Ga0501222_000010 3300049662 Bacteria 113536
264 Ga0501080_0017265 3300049742 Bacteria 6670
265 Ga0501044_0164125 3300049823 Bacteria 2196
266 Ga0501044_0258029 3300049823 Bacteria 1682
267 nmdc:mga03n38_14939_c1 3300050490 Bacteria 2990
268 nmdc:mga00v17_224_c1 3300050491 Bacteria 33722
269 nmdc:mga00v17_331_c1 3300050491 Bacteria 26647
270 nmdc:mga0yw44_122_c1 3300050492 Bacteria 27269
271 nmdc:mga0yw44_1346_c1 3300050492 Bacteria 9731
272 nmdc:mga0yw44_25_c1 3300050492 Bacteria 61711
273 nmdc:mga0yw44_261595_c1 3300050492 Bacteria 1153
274 nmdc:mga0yw44_6_c1 3300050492 Bacteria 272478
275 nmdc:mga0yw44_98_c1 3300050492 Bacteria 30535
276 nmdc:mga0k408_44066_c1 3300050493 Bacteria 2572
277 nmdc:mga0k408_5959_c1 3300050493 Bacteria 4790
278 nmdc:mga0k408_63775_c1 3300050493 Bacteria 2144
279 nmdc:mga0k408_66689_c1 3300050493 Bacteria 2097
280 nmdc:mga06z11_1040_c1 3300050494 Bacteria 10098
281 nmdc:mga06z11_127816_c1 3300050494 Bacteria 1424
282 nmdc:mga04h51_122_c1 3300050495 Bacteria 22932
283 nmdc:mga07m45_16170_c1 3300050496 Bacteria 3994
284 nmdc:mga07m45_55684_c2 3300050496 Bacteria 1758
285 nmdc:mga05p37_455151_c1 3300050507 Bacteria 1480
286 nmdc:mga09592_324401_c1 3300050508 Bacteria 1334
287 nmdc:mga06r32_166003_c1 3300050510 Bacteria 2191
288 nmdc:mga08y16_4776_c1 3300050511 Bacteria 14136
289 nmdc:mga08y16_5327_c1 3300050511 Bacteria 13457
290 nmdc:mga08x19_164884_c1 3300050514 Bacteria 1506
291 nmdc:mga0a205_137737_c1 3300050515 Bacteria 2341
292 Ga0500643_010852 3300053087 Bacteria 3364
293 Ga0500644_0012246 3300053088 Bacteria 2367
294 Ga0500646_0000001 3300053090 Bacteria 273936
295 Ga0500583_0001004 3300053092 Bacteria 8013
296 Ga0500583_0009677 3300053092 Bacteria 3537
297 Ga0500651_0000019 3300053093 Bacteria 141974
298 Ga0500651_0000580 3300053093 Bacteria 18445
299 Ga0500641_0000001 3300053096 Bacteria 1115973
300 Ga0500650_0031474 3300053098 Bacteria 2412
301 Ga0500650_0076895 3300053098 Bacteria 1560
302 Ga0500555_000005 3300053103 Bacteria 342334
303 Ga0500569_000004 3300053109 Bacteria 100531
304 Ga0500594_0000100 3300053118 Bacteria 25421
305 Ga0500594_0000111 3300053118 Bacteria 23911
306 Ga0500652_000001 3300053131 Bacteria 946868
307 Ga0500655_008944 3300053133 Bacteria 1801
308 Ga0500577_0017249 3300053142 Bacteria 2295
309 Ga0500588_0000082 3300053146 Bacteria 12473
310 Ga0500616_0000067 3300053153 Bacteria 236311
311 Ga0500616_0027287 3300053153 Bacteria 3154
312 Ga0500616_0062652 3300053153 Bacteria 1920
313 Ga0500620_004265 3300053155 Bacteria 3176
314 Ga0500622_0003254 3300053156 Bacteria 11016
315 Ga0500570_000235 3300053724 Bacteria 18376
316 Ga0500570_054765 3300053724 Bacteria 1977

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300030744 Ga0316181_1140104 Ga0316181_11401042 301
2 3300005329 Ga0070683_100079056 Ga0070683_1000790564 311
3 3300025944 Ga0207661_10148293 Ga0207661_101482932 311
4 3300005577 Ga0068857_100125569 Ga0068857_1001255691 314
5 3300005617 Ga0068859_100034103 Ga0068859_1000341035 315
6 3300006931 Ga0097620_100034103 Ga0097620_1000341035 315
7 3300009101 Ga0105247_10108308 Ga0105247_101083082 315
8 3300014968 Ga0157379_10002810 Ga0157379_1000281019 315
9 3300025900 Ga0207710_10063217 Ga0207710_100632172 315
10 3300026142 Ga0207698_10005688 Ga0207698_100056882 327
11 3300005356 Ga0070674_100016645 Ga0070674_1000166452 328
12 3300005441 Ga0070700_100005604 Ga0070700_1000056042 328
13 3300005459 Ga0068867_100001947 Ga0068867_10000194713 328
14 3300005543 Ga0070672_100021995 Ga0070672_1000219952 328
15 3300005843 Ga0068860_100002278 Ga0068860_10000227812 328
16 3300005844 Ga0068862_100009207 Ga0068862_1000092072 328
17 3300006881 Ga0068865_100003755 Ga0068865_1000037553 328
18 3300009148 Ga0105243_10045302 Ga0105243_100453024 328
19 3300009553 Ga0105249_10098477 Ga0105249_100984772 328
20 3300013297 Ga0157378_10008083 Ga0157378_100080836 328
21 3300017792 Ga0163161_10058075 Ga0163161_100580752 328
22 3300025938 Ga0207704_10001487 Ga0207704_100014877 328
23 3300025961 Ga0207712_10069883 Ga0207712_100698832 328
24 3300026075 Ga0207708_10019733 Ga0207708_100197332 328
25 3300026089 Ga0207648_10004727 Ga0207648_1000472712 328
26 3300028380 Ga0268265_10054767 Ga0268265_100547673 328
27 3300028381 Ga0268264_10021880 Ga0268264_100218807 328
28 3300036647 Ga0316582_0012093 Ga0316582_0012093_2356_3426 329
29 3300049570 Ga0501033_0014030 Ga0501033_0014030_2285_3358 329
30 3300049571 Ga0501034_0162638 Ga0501034_0162638_675_1748 329
31 3300049572 Ga0501036_0099697 Ga0501036_0099697_1373_2446 329
32 3300049580 Ga0501046_0137082 Ga0501046_0137082_95_1168 329
33 3300005289 Ga0065704_10074192 Ga0065704_100741926 330
34 3300006847 Ga0075431_100125653 Ga0075431_1001256532 330
35 3300005455 Ga0070663_100051896 Ga0070663_1000518961 331
36 3300006846 Ga0075430_100246729 Ga0075430_1002467292 332
37 3300009147 Ga0114129_10351959 Ga0114129_103519592 332
38 3300032133 Ga0316583_10000564 Ga0316583_100005645 332
39 3300050510 nmdc:mga06r32_166003_c1 nmdc:mga06r32_166003_c1_957_2051 332
40 3300049823 Ga0501044_0258029 Ga0501044_0258029_268_1341 333
41 3300053133 Ga0500655_008944 Ga0500655_008944_563_1630 334
42 3300037853 Ga0436364_0885252 Ga0436364_0885252_208_1278 335
43 3300049580 Ga0501046_0002443 Ga0501046_0002443_6953_8032 335
44 3300049581 Ga0501047_0012022 Ga0501047_0012022_6846_7925 335
45 3300049586 Ga0501070_0009517 Ga0501070_0009517_1193_2272 335
46 3300026089 Ga0207648_10111750 Ga0207648_101117503 336
47 3300042438 Ga0439459_0001818 Ga0439459_0001818_1628_2719 337
48 3300053156 Ga0500622_0003254 Ga0500622_0003254_145_1236 338
49 3300006353 Ga0075370_10006644 Ga0075370_100066442 339
50 3300009094 Ga0111539_10495502 Ga0111539_104955021 339
51 3300032133 Ga0316583_10000335 Ga0316583_100003356 339
52 3300048927 Ga0496124_0001458 Ga0496124_0001458_7048_8130 339
53 3300048928 Ga0496125_0041797 Ga0496125_0041797_744_1826 339
54 3300035692 Ga0373935_0015646 Ga0373935_0015646_3038_4117 340
55 3300045051 Ga0451576_0154586 Ga0451576_0154586_1018_2091 340
56 3300049579 Ga0501043_0003937 Ga0501043_0003937_5306_6385 340
57 3300021384 Ga0213876_10017662 Ga0213876_100176623 341
58 3300039437 Ga0436365_0579469 Ga0436365_0579469_1932_3011 341
59 3300005577 Ga0068857_100018098 Ga0068857_1000180982 342
60 3300026116 Ga0207674_10114941 Ga0207674_101149413 342
61 3300039110 Ga0400487_55110 Ga0400487_55110_851_1933 342
62 3300044684 Ga0466966_0097032 Ga0466966_0097032_771_1814 342
63 3300050496 nmdc:mga07m45_55684_c2 nmdc:mga07m45_55684_c2_676_1722 342
64 3300005546 Ga0070696_100002643 Ga0070696_1000026433 343
65 3300050492 nmdc:mga0yw44_1346_c1 nmdc:mga0yw44_1346_c1_4011_5081 343
66 3300005262 Ga0065165_1001026 Ga0065165_100102619 344
67 3300009094 Ga0111539_10073922 Ga0111539_100739225 344
68 3300027907 Ga0207428_10007441 Ga0207428_100074417 344
69 3300050511 nmdc:mga08y16_4776_c1 nmdc:mga08y16_4776_c1_5276_6361 344
70 3300007076 Ga0075435_100019251 Ga0075435_1000192515 345
71 3300045051 Ga0451576_0039062 Ga0451576_0039062_254_1324 345
72 3300005471 Ga0070698_100011341 Ga0070698_1000113417 346
73 3300046460 Ga0495638_0127445 Ga0495638_0127445_18_1109 346
74 3300005577 Ga0068857_100000084 Ga0068857_10000008427 347
75 3300005616 Ga0068852_100000051 Ga0068852_10000005141 347
76 3300009174 Ga0105241_10181398 Ga0105241_101813982 347
77 3300009545 Ga0105237_10000002 Ga0105237_10000002722 347
78 3300009551 Ga0105238_10002583 Ga0105238_1000258313 347
79 3300025911 Ga0207654_10110356 Ga0207654_101103562 347
80 3300025914 Ga0207671_10000008 Ga0207671_10000008830 347
81 3300025924 Ga0207694_10013896 Ga0207694_100138966 347
82 3300026116 Ga0207674_10002117 Ga0207674_100021177 347
83 3300026142 Ga0207698_10000022 Ga0207698_1000002241 347
84 3300045051 Ga0451576_0006230 Ga0451576_0006230_6036_7103 347
85 3300009094 Ga0111539_10005167 Ga0111539_1000516715 348
86 3300027907 Ga0207428_10018356 Ga0207428_100183562 348
87 3300046517 Ga0495630_0074994 Ga0495630_0074994_1468_2532 348
88 3300050511 nmdc:mga08y16_5327_c1 nmdc:mga08y16_5327_c1_11123_12202 348
89 iso_pu_bacteria 2684623219 2687239160 349
90 3300005545 Ga0070695_100017947 Ga0070695_1000179472 350
91 3300005546 Ga0070696_100000629 Ga0070696_10000062914 350
92 3300005549 Ga0070704_100117435 Ga0070704_1001174352 350
93 3300005617 Ga0068859_100509098 Ga0068859_1005090982 350
94 3300006852 Ga0075433_10074904 Ga0075433_100749042 350
95 3300006931 Ga0097620_100509086 Ga0097620_1005090862 350
96 3300025945 Ga0207679_10039458 Ga0207679_100394583 350
97 3300031712 Ga0265342_10063803 Ga0265342_100638032 350
98 3300050492 nmdc:mga0yw44_25_c1 nmdc:mga0yw44_25_c1_45176_46231 350
99 3300050515 nmdc:mga0a205_137737_c1 nmdc:mga0a205_137737_c1_897_1955 350
100 3300025986 Ga0207658_10002292 Ga0207658_1000229210 351
101 3300036647 Ga0316582_0062639 Ga0316582_0062639_1118_2179 351
102 3300037588 Ga0316581_0021208 Ga0316581_0021208_805_1866 351
103 3300053088 Ga0500644_0012246 Ga0500644_0012246_1043_2101 351
104 3300053118 Ga0500594_0000100 Ga0500594_0000100_5983_7041 351
105 iso_pu_bacteria 2585428062 2587754081 351
106 iso_pu_bacteria 2734482258 2735816548 351
107 3300005327 Ga0070658_10108921 Ga0070658_101089212 352
108 3300005436 Ga0070713_100336402 Ga0070713_1003364021 352
109 3300005563 Ga0068855_100131683 Ga0068855_1001316833 352
110 3300006038 Ga0075365_10000003 Ga0075365_1000000341 352
111 3300013306 Ga0163162_10069852 Ga0163162_100698523 352
112 3300031250 Ga0265331_10001696 Ga0265331_100016966 352
113 3300031251 Ga0265327_10000179 Ga0265327_1000017980 352
114 3300037418 Ga0395900_0058644 Ga0395900_0058644_1086_2168 352
115 3300037466 Ga0395898_0023392 Ga0395898_0023392_674_1756 352
116 3300049570 Ga0501033_0051684 Ga0501033_0051684_189_1268 352
117 3300049571 Ga0501034_0351584 Ga0501034_0351584_189_1268 352
118 3300049579 Ga0501043_0025458 Ga0501043_0025458_1372_2451 352
119 3300049589 Ga0501073_0043790 Ga0501073_0043790_267_1349 352
120 3300049742 Ga0501080_0017265 Ga0501080_0017265_4836_5918 352
121 3300049823 Ga0501044_0164125 Ga0501044_0164125_456_1535 352
122 3300005331 Ga0070670_100000854 Ga0070670_10000085413 353
123 3300005340 Ga0070689_100082350 Ga0070689_1000823503 353
124 3300005354 Ga0070675_100139834 Ga0070675_1001398342 353
125 3300005459 Ga0068867_100050421 Ga0068867_1000504211 353
126 3300005466 Ga0070685_10091974 Ga0070685_100919742 353
127 3300005617 Ga0068859_100037062 Ga0068859_1000370623 353
128 3300005840 Ga0068870_10064926 Ga0068870_100649262 353
129 3300005844 Ga0068862_100234803 Ga0068862_1002348032 353
130 3300006931 Ga0097620_100037063 Ga0097620_1000370633 353
131 3300009551 Ga0105238_10000667 Ga0105238_100006674 353
132 3300014326 Ga0157380_10002989 Ga0157380_100029896 353
133 3300014968 Ga0157379_10114644 Ga0157379_101146443 353
134 3300025924 Ga0207694_10009336 Ga0207694_100093364 353
135 3300025925 Ga0207650_10008838 Ga0207650_100088385 353
136 3300026089 Ga0207648_10041035 Ga0207648_100410354 353
137 3300036647 Ga0316582_0303469 Ga0316582_0303469_17_1084 353
138 3300046473 Ga0495582_0019361 Ga0495582_0019361_1117_2187 353
139 3300046689 Ga0495613_0051757 Ga0495613_0051757_420_1490 353
140 3300049570 Ga0501033_0172629 Ga0501033_0172629_290_1399 353
141 3300049581 Ga0501047_0102850 Ga0501047_0102850_1170_2279 353
142 3300050494 nmdc:mga06z11_127816_c1 nmdc:mga06z11_127816_c1_334_1410 353
143 3300050514 nmdc:mga08x19_164884_c1 nmdc:mga08x19_164884_c1_185_1255 353
144 iso_pu_bacteria 2831864461 2831864664 353
145 iso_pu_bacteria 2886848708 2886852169 353
146 3300004803 Ga0058862_12673859 Ga0058862_126738591 354
147 3300005327 Ga0070658_10031872 Ga0070658_100318723 354
148 3300005458 Ga0070681_10046987 Ga0070681_100469872 354
149 3300005563 Ga0068855_100071209 Ga0068855_1000712093 354
150 3300006051 Ga0075364_10218335 Ga0075364_102183352 354
151 3300006195 Ga0075366_10006711 Ga0075366_100067115 354
152 3300017792 Ga0163161_10036923 Ga0163161_100369232 354
153 3300021361 Ga0213872_10001156 Ga0213872_100011564 354
154 3300025909 Ga0207705_10015073 Ga0207705_100150733 354
155 3300025912 Ga0207707_10174173 Ga0207707_101741731 354
156 3300025949 Ga0207667_10072672 Ga0207667_100726722 354
157 3300028794 Ga0307515_10007796 Ga0307515_100077963 354
158 3300028794 Ga0307515_10009311 Ga0307515_100093117 354
159 3300031344 Ga0265316_10000055 Ga0265316_1000005515 354
160 3300031456 Ga0307513_10010732 Ga0307513_100107329 354
161 3300031507 Ga0307509_10000054 Ga0307509_1000005494 354
162 3300031507 Ga0307509_10024723 Ga0307509_100247234 354
163 3300031548 Ga0307408_100031081 Ga0307408_1000310813 354
164 3300031649 Ga0307514_10086174 Ga0307514_100861741 354
165 3300031730 Ga0307516_10013442 Ga0307516_100134429 354
166 3300031901 Ga0307406_10065450 Ga0307406_100654502 354
167 3300032002 Ga0307416_100004923 Ga0307416_1000049232 354
168 3300032004 Ga0307414_10143452 Ga0307414_101434522 354
169 3300035114 Ga0373939_0008825 Ga0373939_0008825_25_1110 354
170 3300036647 Ga0316582_0049635 Ga0316582_0049635_668_1756 354
171 3300039093 Ga0400489_51740 Ga0400489_51740_3187_4275 354
172 3300039447 Ga0436361_0659667 Ga0436361_0659667_9027_10109 354
173 3300044656 Ga0466969_0000008 Ga0466969_0000008_28215_29297 354
174 3300045051 Ga0451576_0044799 Ga0451576_0044799_1658_2734 354
175 3300046519 Ga0495632_0106717 Ga0495632_0106717_119_1204 354
176 3300046522 Ga0495643_0034891 Ga0495643_0034891_791_1876 354
177 3300046660 Ga0495625_0003495 Ga0495625_0003495_13155_14240 354
178 3300049581 Ga0501047_0027422 Ga0501047_0027422_2068_3138 354
179 3300049649 Ga0501198_000012 Ga0501198_000012_40631_41716 354
180 3300049662 Ga0501222_000010 Ga0501222_000010_40637_41722 354
181 3300050493 nmdc:mga0k408_44066_c1 nmdc:mga0k408_44066_c1_198_1280 354
182 3300050493 nmdc:mga0k408_63775_c1 nmdc:mga0k408_63775_c1_155_1240 354
183 3300050493 nmdc:mga0k408_66689_c1 nmdc:mga0k408_66689_c1_167_1252 354
184 3300005327 Ga0070658_10215263 Ga0070658_102152632 355
185 3300005327 Ga0070658_10251032 Ga0070658_102510322 355
186 3300005336 Ga0070680_100001696 Ga0070680_10000169610 355
187 3300005435 Ga0070714_100102620 Ga0070714_1001026201 355
188 3300005563 Ga0068855_100019687 Ga0068855_1000196873 355
189 3300005614 Ga0068856_100235532 Ga0068856_1002355322 355
190 3300013104 Ga0157370_10004744 Ga0157370_100047448 355
191 3300013105 Ga0157369_10003979 Ga0157369_100039794 355
192 3300013105 Ga0157369_10029207 Ga0157369_100292073 355
193 3300013307 Ga0157372_10094262 Ga0157372_100942623 355
194 3300014969 Ga0157376_10019116 Ga0157376_100191163 355
195 3300021361 Ga0213872_10000786 Ga0213872_100007865 355
196 3300021441 Ga0213871_10001783 Ga0213871_100017834 355
197 3300025909 Ga0207705_10071580 Ga0207705_100715803 355
198 3300025917 Ga0207660_10004342 Ga0207660_100043424 355
199 3300028800 Ga0265338_10297050 Ga0265338_102970501 355
200 3300030742 Ga0316183_1115939 Ga0316183_11159392 355
201 3300037418 Ga0395900_0069233 Ga0395900_0069233_909_1988 355
202 3300037853 Ga0436364_0545736 Ga0436364_0545736_11225_12307 355
203 3300039438 Ga0436360_0552269 Ga0436360_0552269_3887_4969 355
204 3300039447 Ga0436361_0630570 Ga0436361_0630570_18693_19775 355
205 3300045836 Ga0466958_0068348 Ga0466958_0068348_521_1612 355
206 3300046472 Ga0495580_0000388 Ga0495580_0000388_3648_4736 355
207 3300046559 Ga0495667_0129844 Ga0495667_0129844_515_1603 355
208 3300048088 Ga0495602_0172729 Ga0495602_0172729_358_1446 355
209 3300001979 JGI24740J21852_10002781 JGI24740J21852_100027816 356
210 3300003316 rootH1_10023981 rootH1_1002398114 356
211 3300003320 rootH2_10000659 rootH2_10000659106 356
212 3300003775 Ga0055524_1001765 Ga0055524_10017659 356
213 3300003794 Ga0055531_10003195 Ga0055531_100031954 356
214 3300004625 Ga0055543_1001329 Ga0055543_10013292 356
215 3300005262 Ga0065165_1000016 Ga0065165_1000016251 356
216 3300005339 Ga0070660_100000099 Ga0070660_10000009945 356
217 3300005535 Ga0070684_100027587 Ga0070684_1000275874 356
218 3300005563 Ga0068855_100000364 Ga0068855_10000036429 356
219 3300005937 Ga0081455_10000006 Ga0081455_10000006107 356
220 3300006038 Ga0075365_10000091 Ga0075365_1000009110 356
221 3300006038 Ga0075365_10000465 Ga0075365_1000046512 356
222 3300006038 Ga0075365_10002813 Ga0075365_100028139 356
223 3300006042 Ga0075368_10001015 Ga0075368_1000101510 356
224 3300006048 Ga0075363_100003244 Ga0075363_1000032443 356
225 3300006051 Ga0075364_10000244 Ga0075364_1000024427 356
226 3300006051 Ga0075364_10000339 Ga0075364_1000033916 356
227 3300006178 Ga0075367_10000110 Ga0075367_1000011025 356
228 3300006237 Ga0097621_100000001 Ga0097621_100000001130 356
229 3300006353 Ga0075370_10007906 Ga0075370_100079066 356
230 3300006358 Ga0068871_100000005 Ga0068871_100000005114 356
231 3300006844 Ga0075428_100272229 Ga0075428_1002722292 356
232 3300009093 Ga0105240_10000004 Ga0105240_10000004741 356
233 3300009093 Ga0105240_10004061 Ga0105240_100040616 356
234 3300009545 Ga0105237_10000488 Ga0105237_100004886 356
235 3300009979 Ga0105032_100003 Ga0105032_100003168 356
236 3300009979 Ga0105032_100022 Ga0105032_10002228 356
237 3300012497 Ga0157319_1000015 Ga0157319_100001517 356
238 3300013104 Ga0157370_10000706 Ga0157370_1000070625 356
239 3300013105 Ga0157369_10000024 Ga0157369_1000002440 356
240 3300013105 Ga0157369_10001762 Ga0157369_1000176215 356
241 3300013307 Ga0157372_10000002 Ga0157372_10000002718 356
242 3300013307 Ga0157372_10000008 Ga0157372_10000008294 356
243 3300013307 Ga0157372_10020496 Ga0157372_100204969 356
244 3300025273 Ga0209673_1009065 Ga0209673_10090652 356
245 3300025295 Ga0209564_1000008 Ga0209564_1000008295 356
246 3300025299 Ga0209256_1002723 Ga0209256_10027237 356
247 3300025304 Ga0209257_1000830 Ga0209257_100083039 356
248 3300025913 Ga0207695_10000009 Ga0207695_100000091125 356
249 3300025913 Ga0207695_10032090 Ga0207695_100320906 356
250 3300025914 Ga0207671_10000003 Ga0207671_100000031181 356
251 3300025919 Ga0207657_10001608 Ga0207657_1000160815 356
252 3300025949 Ga0207667_10000434 Ga0207667_1000043435 356
253 3300030734 Ga0316179_1024327 Ga0316179_10243278 356
254 3300030736 Ga0316180_1026277 Ga0316180_10262775 356
255 3300030742 Ga0316183_1010007 Ga0316183_101000720 356
256 3300030742 Ga0316183_1056756 Ga0316183_105675612 356
257 3300030742 Ga0316183_1153294 Ga0316183_11532942 356
258 3300030744 Ga0316181_1063761 Ga0316181_106376126 356
259 3300030745 Ga0316182_1030052 Ga0316182_103005248 356
260 3300030745 Ga0316182_1039048 Ga0316182_103904812 356
261 3300030745 Ga0316182_1082434 Ga0316182_10824344 356
262 3300030745 Ga0316182_1172812 Ga0316182_117281231 356
263 3300030745 Ga0316182_1308397 Ga0316182_13083972 356
264 3300031251 Ga0265327_10008098 Ga0265327_100080982 356
265 3300031507 Ga0307509_10007551 Ga0307509_100075513 356
266 3300031727 Ga0316576_10175030 Ga0316576_101750302 356
267 3300031731 Ga0307405_10053580 Ga0307405_100535803 356
268 3300031911 Ga0307412_10196814 Ga0307412_101968142 356
269 3300034820 Ga0373959_0000383 Ga0373959_0000383_3617_4687 356
270 3300041405 Ga0439438_026467 Ga0439438_026467_401_1471 356
271 3300041407 Ga0439447_021170 Ga0439447_021170_52_1122 356
272 3300042006 Ga0439432_001021 Ga0439432_001021_4741_5811 356
273 3300042006 Ga0439432_015254 Ga0439432_015254_526_1596 356
274 3300042016 Ga0439463_031526 Ga0439463_031526_161_1246 356
275 3300042122 Ga0450920_000342 Ga0450920_000342_4979_6049 356
276 3300042138 Ga0450903_008326 Ga0450903_008326_593_1663 356
277 3300042145 Ga0450906_004627 Ga0450906_004627_1098_2168 356
278 3300042156 Ga0439446_0000005 Ga0439446_0000005_39421_40491 356
279 3300042156 Ga0439446_0000771 Ga0439446_0000771_873_1943 356
280 3300042435 Ga0439434_0010507 Ga0439434_0010507_1443_2513 356
281 3300044683 Ga0466965_0000073 Ga0466965_0000073_25716_26798 356
282 3300044712 Ga0453684_0197187 Ga0453684_0197187_223_1296 356
283 3300046460 Ga0495638_0000108 Ga0495638_0000108_102457_103530 356
284 3300046460 Ga0495638_0000173 Ga0495638_0000173_9093_10163 356
285 3300046542 Ga0495597_0012417 Ga0495597_0012417_2131_3201 356
286 3300046674 Ga0495588_0110615 Ga0495588_0110615_288_1358 356
287 3300046810 Ga0495660_0000035 Ga0495660_0000035_43226_44296 356
288 3300050490 nmdc:mga03n38_14939_c1 nmdc:mga03n38_14939_c1_1711_2796 356
289 3300050491 nmdc:mga00v17_224_c1 nmdc:mga00v17_224_c1_11297_12379 356
290 3300050491 nmdc:mga00v17_331_c1 nmdc:mga00v17_331_c1_23926_25011 356
291 3300050492 nmdc:mga0yw44_122_c1 nmdc:mga0yw44_122_c1_16669_17751 356
292 3300050492 nmdc:mga0yw44_261595_c1 nmdc:mga0yw44_261595_c1_25_1110 356
293 3300050492 nmdc:mga0yw44_6_c1 nmdc:mga0yw44_6_c1_34195_35280 356
294 3300050492 nmdc:mga0yw44_98_c1 nmdc:mga0yw44_98_c1_12156_13226 356
295 3300050493 nmdc:mga0k408_5959_c1 nmdc:mga0k408_5959_c1_227_1297 356
296 3300050494 nmdc:mga06z11_1040_c1 nmdc:mga06z11_1040_c1_7770_8855 356
297 3300050495 nmdc:mga04h51_122_c1 nmdc:mga04h51_122_c1_17705_18790 356
298 3300050496 nmdc:mga07m45_16170_c1 nmdc:mga07m45_16170_c1_1538_2623 356
299 3300050507 nmdc:mga05p37_455151_c1 nmdc:mga05p37_455151_c1_46_1137 356
300 3300050508 nmdc:mga09592_324401_c1 nmdc:mga09592_324401_c1_192_1283 356
301 3300053087 Ga0500643_010852 Ga0500643_010852_1374_2459 356
302 3300053090 Ga0500646_0000001 Ga0500646_0000001_234205_235275 356
303 3300053092 Ga0500583_0001004 Ga0500583_0001004_5899_6969 356
304 3300053092 Ga0500583_0009677 Ga0500583_0009677_2201_3286 356
305 3300053093 Ga0500651_0000019 Ga0500651_0000019_96247_97332 356
306 3300053093 Ga0500651_0000580 Ga0500651_0000580_8357_9442 356
307 3300053096 Ga0500641_0000001 Ga0500641_0000001_618413_619483 356
308 3300053098 Ga0500650_0031474 Ga0500650_0031474_428_1498 356
309 3300053098 Ga0500650_0076895 Ga0500650_0076895_252_1322 356
310 3300053103 Ga0500555_000005 Ga0500555_000005_234570_235640 356
311 3300053109 Ga0500569_000004 Ga0500569_000004_90369_91439 356
312 3300053118 Ga0500594_0000111 Ga0500594_0000111_16757_17842 356
313 3300053131 Ga0500652_000001 Ga0500652_000001_861944_863014 356
314 3300053142 Ga0500577_0017249 Ga0500577_0017249_512_1597 356
315 3300053146 Ga0500588_0000082 Ga0500588_0000082_6427_7497 356
316 3300053153 Ga0500616_0000067 Ga0500616_0000067_121817_122887 356
317 3300053153 Ga0500616_0027287 Ga0500616_0027287_412_1497 356
318 3300053153 Ga0500616_0062652 Ga0500616_0062652_76_1161 356
319 3300053155 Ga0500620_004265 Ga0500620_004265_451_1521 356
320 3300053724 Ga0500570_000235 Ga0500570_000235_16178_17248 356
321 3300053724 Ga0500570_054765 Ga0500570_054765_532_1602 356

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03462

PCRF

PCRF domain

58

253

0.99

PF00472

RF-1

RF-1 domain

260

370

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5u4j-assembly1.cif.gz_v structural basis of co-translational quality control by arfa and rf2 bound to ribosome 0.9549 110 208
6boh-assembly2.cif.gz_OC antibiotic blasticidin s and e. coli release factor 1 (containing deletion 302-304) bound to the 70s ribosome 0.9263 101 210
6boh-assembly2.cif.gz_OC antibiotic blasticidin s and e. coli release factor 1 (containing deletion 302-304) bound to the 70s ribosome 0.9185 101 210
5j30-assembly1.cif.gz_QY thermus thermophilus 70s termination complex containing e. coli rf1 0.9156 99 348
5o2r-assembly1.cif.gz_v cryo-em structure of the proline-rich antimicrobial peptide api137 bound to the terminating ribosome 0.9106 110 348
ID Description Score Start End Superfamily
af_Q54RE7_180_291_3.30.70.1660 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9729 106 216 3.30.70.1660
af_A0A1D6IEG8_11_112_3.30.70.1660 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9697 107 206 3.30.70.1660
af_P30775_152_262_3.30.70.1660 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9679 107 210 3.30.70.1660
1gqeA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9662 107 346 3.30.70.1660
2b3tB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9573 106 348 3.30.70.1660
ID Description Score Start End GO Terms
AF-X1A613-F1-model_v4 Peptide chain release factor domain-containing protein 0.9739 102 201 GO:0006415
AF-A0A350VIL7-F1-model_v4 deleted 0.9696 115 213
AF-A0A350VIL7-F1-model_v4 deleted 0.9601 115 213
AF-A0A3M4DMZ3-F1-model_v4 Peptide chain release factor 1 0.9517 117 356 GO:0005737
GO:0016149
AF-A0A3M4DMZ3-F1-model_v4 Peptide chain release factor 1 0.9441 117 356 GO:0005737
GO:0016149

Feature Viewer

pLDDT pTM Quality
86.29 0.69 Medium
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Predicted Structure (AlphaFold2)

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