F402692

General Info

Members Datasets Scaffolds Average Seq Length
314 208 628 317

Family's Representative Sequence

Representative Sequence 3300014969|Ga0157376_10148359|Ga0157376_101483592
Length 317
Sequence MSEVLVLVDHVDGKVRKPTFELLTIAKRLGEPSAVFIGGSDKADGVVDAVKKYGAEKVYVVDDAEIKGYLVAPKAEALQQIAEKADPAAILIPSNAEGKEIAGRLAIKLNSGLITDAVDVSASEGGEGPVTTQSVFAGSYTVQAKVTTGTPIITVKPNSAAPEESEGAFAATVSDSAKKAKIVAAQPRKASGRPELNEAAIVVSGGRGTGGDFSEVEGLADSLGAAVGASRAAVDSGWIPHAFQIGQTGKVVSPQLYIANGISGAIQHRAGMQTSKTIVAVNKDEEAPIFELVDFGVVGDLHTVLPAATEEITKRKG

Samples

Sample ID Description Type Environment
1 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
30 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
81 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
82 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
83 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
84 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
85 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
86 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
87 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
88 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
89 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
96 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
97 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
98 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
99 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
100 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
101 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
102 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
103 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
104 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
105 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
106 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
107 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
110 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
111 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
112 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
113 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
116 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
126 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
136 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
150 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
153 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
154 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
155 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
156 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
157 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
158 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
159 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
162 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
165 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
166 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
167 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
168 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
169 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
170 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
173 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
174 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
175 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
176 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
177 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
178 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
179 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
180 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
181 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
184 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
185 2643221561 Nocardioides sp. Root151 Isolate Unclassified
186 2643221576 Nocardioides sp. Root614 Isolate Unclassified
187 2643221590 Nocardioides sp. Root682 Isolate Unclassified
188 2643221604 Nocardioides sp. Root190 Isolate Unclassified
189 2643221615 Nocardioides sp. Root224 Isolate Unclassified
190 2643221617 Nocardioides sp. Root79 Isolate Unclassified
191 2643221620 Nocardioides sp. Root240 Isolate Unclassified
192 2643221641 Nocardioides sp. Root122 Isolate Unclassified
193 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
194 2643221679 Angustibacter sp. Root456 Isolate Unclassified
195 2643221696 Nocardioides sp. Root140 Isolate Unclassified
196 2738541305 Nocardioides sp. CF167 Isolate Unclassified
197 2739367898 Nocardioides sp. CF479 Isolate Unclassified
198 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
199 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
200 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
201 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
202 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
203 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
204 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
205 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
206 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
207 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
208 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.13
Metatranscriptomes 1.91
Isolates 7.96

Biome Distribution

Category Percentage (%)
Aerial Root 0.96
Bulb 0
Endosphere 10.83
Nodule 0.64
Rhizoplane 8.28
Rhizosphere 71.02
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157376_10148359 3300014969 Bacteria 2112
2 JGI24739J22299_10006660 3300001989 Bacteria 4348
3 JGI24737J22298_10039382 3300001990 Bacteria 1453
4 JGI24737J22298_10060131 3300001990 Bacteria 1144
5 Ga0070658_10073234 3300005327 Bacteria 2809
6 Ga0070658_10095304 3300005327 Bacteria 2457
7 Ga0070658_10141114 3300005327 Bacteria 2013
8 Ga0070683_100009866 3300005329 Bacteria 8181
9 Ga0070683_100155155 3300005329 Bacteria 2171
10 Ga0070660_100045789 3300005339 Bacteria 3350
11 Ga0070692_10000949 3300005345 Bacteria 9852
12 Ga0070674_100047623 3300005356 Bacteria 2939
13 Ga0070659_100107217 3300005366 Bacteria 2252
14 Ga0070667_100123214 3300005367 Bacteria 2257
15 Ga0070701_10014104 3300005438 Bacteria 3655
16 Ga0070663_100427287 3300005455 Bacteria 1088
17 Ga0070662_100020029 3300005457 Bacteria 4552
18 Ga0068867_100009302 3300005459 Bacteria 6931
19 Ga0070698_100002148 3300005471 Bacteria 21859
20 Ga0070679_100145287 3300005530 Bacteria 2350
21 Ga0070679_100313720 3300005530 Bacteria 1518
22 Ga0070684_100022809 3300005535 Bacteria 5226
23 Ga0070684_100033872 3300005535 Bacteria 4364
24 Ga0070684_100067392 3300005535 Bacteria 3144
25 Ga0068853_100087469 3300005539 Bacteria 2734
26 Ga0068853_100253093 3300005539 Bacteria 1617
27 Ga0070672_100010075 3300005543 Bacteria 6543
28 Ga0070665_100423536 3300005548 Bacteria 1340
29 Ga0070664_100003085 3300005564 Bacteria 13467
30 Ga0068857_100017173 3300005577 Bacteria 6339
31 Ga0068857_100164901 3300005577 Bacteria 2012
32 Ga0070702_100009147 3300005615 Bacteria 4835
33 Ga0070702_100069231 3300005615 Bacteria 2079
34 Ga0070702_100071828 3300005615 Bacteria 2047
35 Ga0068861_100005937 3300005719 Bacteria 8296
36 Ga0068870_10015852 3300005840 Bacteria 3586
37 Ga0068860_100489495 3300005843 Bacteria 1227
38 Ga0081455_10000782 3300005937 Bacteria 40906
39 Ga0081455_10228371 3300005937 Bacteria 1375
40 Ga0075365_10008585 3300006038 Bacteria 5815
41 Ga0075365_10013005 3300006038 Bacteria 4963
42 Ga0075365_10121574 3300006038 Bacteria 1801
43 Ga0075365_10183193 3300006038 Bacteria 1464
44 Ga0075365_10202261 3300006038 Bacteria 1391
45 Ga0075368_10004514 3300006042 Bacteria 4727
46 Ga0075363_100002213 3300006048 Bacteria 7851
47 Ga0075363_100010506 3300006048 Bacteria 4401
48 Ga0075364_10014517 3300006051 Bacteria 4869
49 Ga0075364_10081582 3300006051 Bacteria 2138
50 Ga0075362_10050942 3300006177 Bacteria 1852
51 Ga0075367_10006242 3300006178 Bacteria 6004
52 Ga0075367_10075648 3300006178 Bacteria 2031
53 Ga0075370_10011051 3300006353 Bacteria 4734
54 Ga0075370_10015540 3300006353 Bacteria 4077
55 Ga0075370_10016075 3300006353 Bacteria 4021
56 Ga0068865_100001007 3300006881 Bacteria 16180
57 Ga0068865_100329983 3300006881 Bacteria 1230
58 Ga0111539_10065650 3300009094 Bacteria 4287
59 Ga0105245_10039389 3300009098 Bacteria 4206
60 Ga0105247_10276397 3300009101 Bacteria 1157
61 Ga0105243_10028457 3300009148 Bacteria 4290
62 Ga0105248_10014374 3300009177 Bacteria 8712
63 Ga0105237_10182895 3300009545 Bacteria 2096
64 Ga0105249_10235885 3300009553 Bacteria 1806
65 Ga0105239_10017822 3300010375 Bacteria 7855
66 Ga0105246_10271798 3300011119 Bacteria 1355
67 Ga0105246_10328197 3300011119 Bacteria 1246
68 Ga0157319_1000998 3300012497 Bacteria 1377
69 Ga0157371_10117543 3300013102 Bacteria 1890
70 Ga0163162_10061807 3300013306 Bacteria 3784
71 Ga0157372_10026382 3300013307 Bacteria 6322
72 Ga0157372_10551029 3300013307 Bacteria 1344
73 Ga0157375_10185882 3300013308 Bacteria 2231
74 Ga0157375_10837781 3300013308 Bacteria 1067
75 Ga0157380_10045917 3300014326 Bacteria 3430
76 Ga0157377_10154905 3300014745 Bacteria 1420
77 Ga0157379_10033725 3300014968 Bacteria 4566
78 Ga0206349_1245650 3300020075 Bacteria 1588
79 Ga0206350_11501952 3300020080 Bacteria 1458
80 Ga0207647_10005284 3300025904 Bacteria 9498
81 Ga0207647_10023362 3300025904 Bacteria 4089
82 Ga0207647_10054909 3300025904 Bacteria 2449
83 Ga0207643_10007206 3300025908 Bacteria 5970
84 Ga0207643_10125231 3300025908 Bacteria 1525
85 Ga0207705_10031747 3300025909 Bacteria 3772
86 Ga0207705_10124516 3300025909 Bacteria 1915
87 Ga0207705_10250012 3300025909 Bacteria 1352
88 Ga0207671_10166699 3300025914 Bacteria 1708
89 Ga0207657_10043612 3300025919 Bacteria 3949
90 Ga0207652_10119922 3300025921 Bacteria 2339
91 Ga0207687_10022429 3300025927 Bacteria 4202
92 Ga0207690_10006121 3300025932 Bacteria 7132
93 Ga0207706_10002746 3300025933 Bacteria 17108
94 Ga0207706_10047160 3300025933 Bacteria 3813
95 Ga0207709_10017193 3300025935 Bacteria 4032
96 Ga0207669_10003700 3300025937 Bacteria 6652
97 Ga0207704_10180269 3300025938 Bacteria 1526
98 Ga0207689_10397203 3300025942 Bacteria 1149
99 Ga0207661_10066438 3300025944 Bacteria 2930
100 Ga0207661_10070149 3300025944 Bacteria 2860
101 Ga0207712_10371595 3300025961 Bacteria 1194
102 Ga0207703_10213372 3300026035 Bacteria 1722
103 Ga0207639_10421152 3300026041 Bacteria 1207
104 Ga0207678_10063199 3300026067 Bacteria 3181
105 Ga0207708_10000180 3300026075 Bacteria 49555
106 Ga0207708_10013277 3300026075 Bacteria 6150
107 Ga0207676_10244680 3300026095 Bacteria 1611
108 Ga0207674_10024262 3300026116 Bacteria 6483
109 Ga0207674_10052266 3300026116 Bacteria 4167
110 Ga0207675_100004600 3300026118 Bacteria 13296
111 Ga0207683_10159636 3300026121 Bacteria 2037
112 Ga0209813_10020225 3300027866 Bacteria 1860
113 Ga0268264_10009136 3300028381 Bacteria 8217
114 Ga0268264_10151716 3300028381 Bacteria 2078
115 Ga0307515_10248148 3300028794 Bacteria 1538
116 Ga0316176_1211760 3300030732 Bacteria 1109
117 Ga0316183_1098420 3300030742 Bacteria 1753
118 Ga0316181_1057618 3300030744 Bacteria 2403
119 Ga0316182_1440866 3300030745 Bacteria 11079
120 Ga0307513_10198506 3300031456 Bacteria 1850
121 Ga0307413_10053241 3300031824 Bacteria 2449
122 Ga0307410_10135852 3300031852 Bacteria 1813
123 Ga0307412_10041198 3300031911 Bacteria 2992
124 Ga0307409_100230251 3300031995 Bacteria 1679
125 Ga0307414_10039639 3300032004 Bacteria 3175
126 Ga0307414_10197857 3300032004 Bacteria 1632
127 Ga0307411_10538803 3300032005 Bacteria 994
128 Ga0307415_100000288 3300032126 Bacteria 21803
129 Ga0307415_100170695 3300032126 Bacteria 1696
130 Ga0395900_0039420 3300037418 Bacteria 4867
131 Ga0395900_0206259 3300037418 Bacteria 1987
132 Ga0395900_0452875 3300037418 Bacteria 1239
133 Ga0395901_0040527 3300038443 Bacteria 4824
134 Ga0395901_0220158 3300038443 Bacteria 1984
135 Ga0436365_0308681 3300039437 Bacteria 1194
136 Ga0436362_0534277 3300039453 Bacteria 1018
137 Ga0439461_0025586 3300041410 Bacteria 1199
138 Ga0451807_2407474 3300041486 Bacteria 1080
139 Ga0451837_0249285 3300041494 Bacteria 3102
140 Ga0451837_0256370 3300041494 Bacteria 1133
141 Ga0451839_0207057 3300041496 Bacteria 2502
142 Ga0451853_2090886 3300041512 Bacteria 3897
143 Ga0439431_0004810 3300041997 Bacteria 2974
144 Ga0439445_0024887 3300042004 Bacteria 1525
145 Ga0439446_0032767 3300042156 Bacteria 1508
146 Ga0439434_0008870 3300042435 Bacteria 2955
147 Ga0439434_0012233 3300042435 Bacteria 2540
148 Ga0466972_0027003 3300044658 Bacteria 2843
149 Ga0466965_0006574 3300044683 Bacteria 5294
150 Ga0466965_0072081 3300044683 Bacteria 1738
151 Ga0466965_0108635 3300044683 Bacteria 1424
152 Ga0466966_0120792 3300044684 Bacteria 1609
153 Ga0466966_0147706 3300044684 Bacteria 1435
154 Ga0466961_0002371 3300044693 Bacteria 11705
155 Ga0466961_0074968 3300044693 Bacteria 2145
156 Ga0466961_0088566 3300044693 Bacteria 1955
157 Ga0466961_0158610 3300044693 Bacteria 1410
158 Ga0466963_0006003 3300044694 Bacteria 7158
159 Ga0466964_0015130 3300044706 Bacteria 2938
160 Ga0466971_0047953 3300044719 Bacteria 1920
161 Ga0466971_0123723 3300044719 Bacteria 1198
162 Ga0466970_0003738 3300044765 Bacteria 7439
163 Ga0466970_0007957 3300044765 Bacteria 5322
164 Ga0466970_0017279 3300044765 Bacteria 3726
165 Ga0466970_0042789 3300044765 Bacteria 2409
166 Ga0466970_0133355 3300044765 Bacteria 1365
167 Ga0466957_0026158 3300044842 Bacteria 3461
168 Ga0466960_0006542 3300044901 Bacteria 4678
169 Ga0466960_0022775 3300044901 Bacteria 2804
170 Ga0466959_0054859 3300045049 Bacteria 2910
171 Ga0451576_0283300 3300045051 Bacteria 1733
172 Ga0466958_0008909 3300045836 Bacteria 5575
173 Ga0466967_0012586 3300045976 Bacteria 6483
174 Ga0466967_0016897 3300045976 Bacteria 5770
175 Ga0466967_0083544 3300045976 Bacteria 2888
176 Ga0466967_0287883 3300045976 Bacteria 1578
177 Ga0466967_0383278 3300045976 Bacteria 1365
178 Ga0495627_055760 3300046453 Bacteria 1179
179 Ga0496100_0322125 3300048903 Bacteria 1161
180 Ga0496101_0031922 3300048904 Bacteria 3705
181 Ga0496102_0006083 3300048905 Bacteria 10292
182 Ga0496102_0042938 3300048905 Bacteria 4098
183 Ga0496102_0066198 3300048905 Bacteria 3311
184 Ga0496105_0058461 3300048908 Bacteria 3183
185 Ga0496105_0212418 3300048908 Bacteria 1577
186 Ga0496106_0041421 3300048909 Bacteria 3451
187 Ga0496107_0038480 3300048910 Bacteria 3431
188 Ga0496108_0291393 3300048911 Bacteria 1421
189 Ga0496109_0119213 3300048912 Bacteria 2457
190 Ga0496110_0004928 3300048913 Bacteria 10427
191 Ga0496110_0112572 3300048913 Bacteria 2447
192 Ga0496110_0261987 3300048913 Bacteria 1573
193 Ga0496111_0008583 3300048914 Bacteria 6770
194 Ga0496111_0076335 3300048914 Bacteria 2442
195 Ga0496111_0339429 3300048914 Bacteria 1112
196 Ga0496112_0241250 3300048915 Bacteria 1760
197 Ga0496112_0340264 3300048915 Bacteria 1444
198 Ga0496113_0134510 3300048916 Bacteria 1942
199 Ga0496114_0007513 3300048917 Bacteria 8620
200 Ga0496114_0014283 3300048917 Bacteria 6370
201 Ga0496114_0083621 3300048917 Bacteria 2701
202 Ga0496114_0119130 3300048917 Bacteria 2269
203 Ga0496115_0153597 3300048918 Bacteria 1901
204 Ga0501317_002446 3300049533 Bacteria 1757
205 Ga0501031_0025465 3300049568 Bacteria 3857
206 Ga0501032_0076051 3300049569 Bacteria 2236
207 Ga0501033_0057597 3300049570 Bacteria 2871
208 Ga0501034_0111414 3300049571 Bacteria 2727
209 Ga0501038_0006027 3300049574 Bacteria 11218
210 Ga0501038_0096428 3300049574 Bacteria 2469
211 Ga0501038_0210012 3300049574 Bacteria 1558
212 Ga0501039_0036812 3300049575 Bacteria 3775
213 Ga0501039_0089534 3300049575 Bacteria 2398
214 Ga0501039_0266909 3300049575 Bacteria 1345
215 Ga0501040_0021806 3300049576 Bacteria 4282
216 Ga0501041_0012144 3300049577 Bacteria 5100
217 Ga0501041_0303946 3300049577 Bacteria 1005
218 Ga0501042_0053960 3300049578 Bacteria 2867
219 Ga0501042_0135892 3300049578 Bacteria 1773
220 Ga0501043_0028595 3300049579 Bacteria 4376
221 Ga0501043_0074830 3300049579 Bacteria 2661
222 Ga0501043_0242863 3300049579 Bacteria 1389
223 Ga0501046_0001938 3300049580 Bacteria 19639
224 Ga0501046_0012206 3300049580 Bacteria 7320
225 Ga0501046_0017662 3300049580 Bacteria 5949
226 Ga0501047_0137443 3300049581 Bacteria 2323
227 Ga0501048_0071163 3300049582 Bacteria 2455
228 Ga0501048_0150324 3300049582 Bacteria 1647
229 Ga0501048_0183877 3300049582 Bacteria 1482
230 Ga0501067_0006392 3300049583 Bacteria 6527
231 Ga0501068_0015446 3300049584 Bacteria 4386
232 Ga0501068_0054455 3300049584 Bacteria 2423
233 Ga0501070_0009842 3300049586 Bacteria 8084
234 Ga0501070_0030630 3300049586 Bacteria 4508
235 Ga0501070_0185608 3300049586 Bacteria 1710
236 Ga0501071_0044238 3300049587 Bacteria 3193
237 Ga0501071_0084790 3300049587 Bacteria 2323
238 Ga0501071_0127016 3300049587 Bacteria 1893
239 Ga0501072_0015028 3300049588 Bacteria 5934
240 Ga0501072_0085438 3300049588 Bacteria 2503
241 Ga0501073_0258256 3300049589 Bacteria 1202
242 Ga0501074_0075711 3300049590 Bacteria 2416
243 Ga0501075_0012095 3300049591 Bacteria 6126
244 Ga0501076_0141276 3300049592 Bacteria 1956
245 Ga0501076_0170703 3300049592 Bacteria 1773
246 Ga0501077_0069440 3300049593 Bacteria 2233
247 Ga0501079_0038902 3300049741 Bacteria 3668
248 Ga0501079_0052566 3300049741 Bacteria 3144
249 Ga0501079_0224099 3300049741 Bacteria 1469
250 Ga0501080_0102481 3300049742 Bacteria 2655
251 Ga0501080_0128920 3300049742 Bacteria 2342
252 Ga0501080_0198214 3300049742 Bacteria 1844
253 Ga0501080_0404554 3300049742 Bacteria 1228
254 Ga0501080_0515042 3300049742 Bacteria 1068
255 Ga0501083_0299578 3300049744 Bacteria 1046
256 Ga0501035_0043772 3300049822 Bacteria 4034
257 Ga0501035_0046941 3300049822 Bacteria 3881
258 Ga0501044_0016208 3300049823 Bacteria 8011
259 Ga0501045_0052089 3300049824 Bacteria 2987
260 Ga0501045_0058252 3300049824 Bacteria 2828
261 nmdc:mga03n38_4213_c1 3300050490 Bacteria 4730
262 nmdc:mga00v17_38354_c1 3300050491 Bacteria 2865
263 nmdc:mga00v17_70682_c1 3300050491 Bacteria 2162
264 nmdc:mga0yw44_3559_c1 3300050492 Bacteria 6944
265 nmdc:mga0yw44_387_c1 3300050492 Bacteria 15325
266 nmdc:mga0yw44_58775_c1 3300050492 Bacteria 2350
267 nmdc:mga0yw44_81652_c1 3300050492 Bacteria 2027
268 nmdc:mga06z11_45775_c1 3300050494 Bacteria 2214
269 nmdc:mga06z11_80792_c1 3300050494 Bacteria 1744
270 nmdc:mga04h51_1509_c1 3300050495 Bacteria 5393
271 nmdc:mga07m45_212292_c1 3300050496 Bacteria 1126
272 nmdc:mga07m45_61940_c1 3300050496 Bacteria 2120
273 nmdc:mga08y16_49090_c1 3300050511 Bacteria 4417
274 Ga0495601_0035386 3300053077 Bacteria 3117
275 Ga0500644_0000729 3300053088 Bacteria 11562
276 Ga0500554_017833 3300053102 Bacteria 1905
277 Ga0500556_0001671 3300053104 Bacteria 8599
278 Ga0500593_001696 3300053117 Bacteria 7948
279 Ga0500573_0001348 3300053140 Bacteria 11657
280 Ga0501084_0094575 3300054114 Bacteria 2509
281 Ga0587083_0012712 3300059505 Bacteria 1420
282 Ga0587076_018998 3300059645 Bacteria 1113
283 Ga0587111_0038183 3300060346 Bacteria 1013
284 Ga0501082_0103632 3300060353 Bacteria 2461
285 Ga0501082_0277313 3300060353 Bacteria 1459
286 Ga0501082_0396084 3300060353 Bacteria 1205
287 Ga0466962_0028033 3300061719 Bacteria 2699
288 Ga0530510_0008532 3300061734 Bacteria 7152
289 Ga0530510_0046477 3300061734 Bacteria 3136
290 2643828376 2643221561 Bacteria 4984412
291 2643893041 2643221576 Bacteria 5214352
292 2643961900 2643221590 Bacteria 5214697
293 2644034192 2643221604 Bacteria 5014917
294 2644090307 2643221615 Bacteria 5487866
295 2644102434 2643221617 Bacteria 5139111
296 2644118096 2643221620 Bacteria 5134593
297 2644230648 2643221641 Bacteria 4490190
298 2644320153 2643221657 Bacteria 5490246
299 2644444028 2643221679 Bacteria 3839507
300 2644535190 2643221696 Bacteria 5431823
301 2738871417 2738541305 Bacteria 4910150
302 2740167714 2739367898 Bacteria 4367674
303 2774396889 2773857762 Bacteria 5971770
304 2809198528 2808606439 Bacteria 5952208
305 2812333677 2811994874 Bacteria 5367947
306 2812352892 2811994878 Bacteria 5992952
307 2816427397 2816332119 Bacteria 8120218
308 2855389782 2855386786 Bacteria 4752232
309 2891969590 2891968417 Bacteria 5821697
310 2984576784 2984576629 Bacteria 4248407
311 2984595230 2984592036 Bacteria 3670284
312 2990258534 2990256926 Bacteria 4252839
313 8054610885 8054609563 Bacteria 5170090
314 8054613284 8054609563 Bacteria 5170090
315 Ga0157376_10148359
316 JGI24739J22299_10006660
317 JGI24737J22298_10039382
318 JGI24737J22298_10060131
319 Ga0070658_10073234
320 Ga0070658_10095304
321 Ga0070658_10141114
322 Ga0070683_100009866
323 Ga0070683_100155155
324 Ga0070660_100045789
325 Ga0070692_10000949
326 Ga0070674_100047623
327 Ga0070659_100107217
328 Ga0070667_100123214
329 Ga0070701_10014104
330 Ga0070663_100427287
331 Ga0070662_100020029
332 Ga0068867_100009302
333 Ga0070698_100002148
334 Ga0070679_100145287
335 Ga0070679_100313720
336 Ga0070684_100022809
337 Ga0070684_100033872
338 Ga0070684_100067392
339 Ga0068853_100087469
340 Ga0068853_100253093
341 Ga0070672_100010075
342 Ga0070665_100423536
343 Ga0070664_100003085
344 Ga0068857_100017173
345 Ga0068857_100164901
346 Ga0070702_100009147
347 Ga0070702_100069231
348 Ga0070702_100071828
349 Ga0068861_100005937
350 Ga0068870_10015852
351 Ga0068860_100489495
352 Ga0081455_10000782
353 Ga0081455_10228371
354 Ga0075365_10008585
355 Ga0075365_10013005
356 Ga0075365_10121574
357 Ga0075365_10183193
358 Ga0075365_10202261
359 Ga0075368_10004514
360 Ga0075363_100002213
361 Ga0075363_100010506
362 Ga0075364_10014517
363 Ga0075364_10081582
364 Ga0075362_10050942
365 Ga0075367_10006242
366 Ga0075367_10075648
367 Ga0075370_10011051
368 Ga0075370_10015540
369 Ga0075370_10016075
370 Ga0068865_100001007
371 Ga0068865_100329983
372 Ga0111539_10065650
373 Ga0105245_10039389
374 Ga0105247_10276397
375 Ga0105243_10028457
376 Ga0105248_10014374
377 Ga0105237_10182895
378 Ga0105249_10235885
379 Ga0105239_10017822
380 Ga0105246_10271798
381 Ga0105246_10328197
382 Ga0157319_1000998
383 Ga0157371_10117543
384 Ga0163162_10061807
385 Ga0157372_10026382
386 Ga0157372_10551029
387 Ga0157375_10185882
388 Ga0157375_10837781
389 Ga0157380_10045917
390 Ga0157377_10154905
391 Ga0157379_10033725
392 Ga0206349_1245650
393 Ga0206350_11501952
394 Ga0207647_10005284
395 Ga0207647_10023362
396 Ga0207647_10054909
397 Ga0207643_10007206
398 Ga0207643_10125231
399 Ga0207705_10031747
400 Ga0207705_10124516
401 Ga0207705_10250012
402 Ga0207671_10166699
403 Ga0207657_10043612
404 Ga0207652_10119922
405 Ga0207687_10022429
406 Ga0207690_10006121
407 Ga0207706_10002746
408 Ga0207706_10047160
409 Ga0207709_10017193
410 Ga0207669_10003700
411 Ga0207704_10180269
412 Ga0207689_10397203
413 Ga0207661_10066438
414 Ga0207661_10070149
415 Ga0207712_10371595
416 Ga0207703_10213372
417 Ga0207639_10421152
418 Ga0207678_10063199
419 Ga0207708_10000180
420 Ga0207708_10013277
421 Ga0207676_10244680
422 Ga0207674_10024262
423 Ga0207674_10052266
424 Ga0207675_100004600
425 Ga0207683_10159636
426 Ga0209813_10020225
427 Ga0268264_10009136
428 Ga0268264_10151716
429 Ga0307515_10248148
430 Ga0316176_1211760
431 Ga0316183_1098420
432 Ga0316181_1057618
433 Ga0316182_1440866
434 Ga0307513_10198506
435 Ga0307413_10053241
436 Ga0307410_10135852
437 Ga0307412_10041198
438 Ga0307409_100230251
439 Ga0307414_10039639
440 Ga0307414_10197857
441 Ga0307411_10538803
442 Ga0307415_100000288
443 Ga0307415_100170695
444 Ga0395900_0039420
445 Ga0395900_0206259
446 Ga0395900_0452875
447 Ga0395901_0040527
448 Ga0395901_0220158
449 Ga0436365_0308681
450 Ga0436362_0534277
451 Ga0439461_0025586
452 Ga0451807_2407474
453 Ga0451837_0249285
454 Ga0451837_0256370
455 Ga0451839_0207057
456 Ga0451853_2090886
457 Ga0439431_0004810
458 Ga0439445_0024887
459 Ga0439446_0032767
460 Ga0439434_0008870
461 Ga0439434_0012233
462 Ga0466972_0027003
463 Ga0466965_0006574
464 Ga0466965_0072081
465 Ga0466965_0108635
466 Ga0466966_0120792
467 Ga0466966_0147706
468 Ga0466961_0002371
469 Ga0466961_0074968
470 Ga0466961_0088566
471 Ga0466961_0158610
472 Ga0466963_0006003
473 Ga0466964_0015130
474 Ga0466971_0047953
475 Ga0466971_0123723
476 Ga0466970_0003738
477 Ga0466970_0007957
478 Ga0466970_0017279
479 Ga0466970_0042789
480 Ga0466970_0133355
481 Ga0466957_0026158
482 Ga0466960_0006542
483 Ga0466960_0022775
484 Ga0466959_0054859
485 Ga0451576_0283300
486 Ga0466958_0008909
487 Ga0466967_0012586
488 Ga0466967_0016897
489 Ga0466967_0083544
490 Ga0466967_0287883
491 Ga0466967_0383278
492 Ga0495627_055760
493 Ga0496100_0322125
494 Ga0496101_0031922
495 Ga0496102_0006083
496 Ga0496102_0042938
497 Ga0496102_0066198
498 Ga0496105_0058461
499 Ga0496105_0212418
500 Ga0496106_0041421
501 Ga0496107_0038480
502 Ga0496108_0291393
503 Ga0496109_0119213
504 Ga0496110_0004928
505 Ga0496110_0112572
506 Ga0496110_0261987
507 Ga0496111_0008583
508 Ga0496111_0076335
509 Ga0496111_0339429
510 Ga0496112_0241250
511 Ga0496112_0340264
512 Ga0496113_0134510
513 Ga0496114_0007513
514 Ga0496114_0014283
515 Ga0496114_0083621
516 Ga0496114_0119130
517 Ga0496115_0153597
518 Ga0501317_002446
519 Ga0501031_0025465
520 Ga0501032_0076051
521 Ga0501033_0057597
522 Ga0501034_0111414
523 Ga0501038_0006027
524 Ga0501038_0096428
525 Ga0501038_0210012
526 Ga0501039_0036812
527 Ga0501039_0089534
528 Ga0501039_0266909
529 Ga0501040_0021806
530 Ga0501041_0012144
531 Ga0501041_0303946
532 Ga0501042_0053960
533 Ga0501042_0135892
534 Ga0501043_0028595
535 Ga0501043_0074830
536 Ga0501043_0242863
537 Ga0501046_0001938
538 Ga0501046_0012206
539 Ga0501046_0017662
540 Ga0501047_0137443
541 Ga0501048_0071163
542 Ga0501048_0150324
543 Ga0501048_0183877
544 Ga0501067_0006392
545 Ga0501068_0015446
546 Ga0501068_0054455
547 Ga0501070_0009842
548 Ga0501070_0030630
549 Ga0501070_0185608
550 Ga0501071_0044238
551 Ga0501071_0084790
552 Ga0501071_0127016
553 Ga0501072_0015028
554 Ga0501072_0085438
555 Ga0501073_0258256
556 Ga0501074_0075711
557 Ga0501075_0012095
558 Ga0501076_0141276
559 Ga0501076_0170703
560 Ga0501077_0069440
561 Ga0501079_0038902
562 Ga0501079_0052566
563 Ga0501079_0224099
564 Ga0501080_0102481
565 Ga0501080_0128920
566 Ga0501080_0198214
567 Ga0501080_0404554
568 Ga0501080_0515042
569 Ga0501083_0299578
570 Ga0501035_0043772
571 Ga0501035_0046941
572 Ga0501044_0016208
573 Ga0501045_0052089
574 Ga0501045_0058252
575 nmdc:mga03n38_4213_c1
576 nmdc:mga00v17_38354_c1
577 nmdc:mga00v17_70682_c1
578 nmdc:mga0yw44_3559_c1
579 nmdc:mga0yw44_387_c1
580 nmdc:mga0yw44_58775_c1
581 nmdc:mga0yw44_81652_c1
582 nmdc:mga06z11_45775_c1
583 nmdc:mga06z11_80792_c1
584 nmdc:mga04h51_1509_c1
585 nmdc:mga07m45_212292_c1
586 nmdc:mga07m45_61940_c1
587 nmdc:mga08y16_49090_c1
588 Ga0495601_0035386
589 Ga0500644_0000729
590 Ga0500554_017833
591 Ga0500556_0001671
592 Ga0500593_001696
593 Ga0500573_0001348
594 Ga0501084_0094575
595 Ga0587083_0012712
596 Ga0587076_018998
597 Ga0587111_0038183
598 Ga0501082_0103632
599 Ga0501082_0277313
600 Ga0501082_0396084
601 Ga0466962_0028033
602 Ga0530510_0008532
603 Ga0530510_0046477
604 2643828376
605 2643893041
606 2643961900
607 2644034192
608 2644090307
609 2644102434
610 2644118096
611 2644230648
612 2644320153
613 2644444028
614 2644535190
615 2738871417
616 2740167714
617 2774396889
618 2809198528
619 2812333677
620 2812352892
621 2816427397
622 2855389782
623 2891969590
624 2984576784
625 2984595230
626 2990258534
627 8054610885
628 8054613284

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00766

ETF_alpha

Electron transfer flavoprotein FAD-binding domain

195

273

0.98

PF01012

ETF

Electron transfer flavoprotein domain

4

186

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1o95-assembly1.cif.gz_F ternary complex between trimethylamine dehydrogenase and electron transferring flavoprotein 0.8589 2 187
1t9g-assembly1.cif.gz_R structure of the human mcad:etf complex 0.8527 3 187
1t9g-assembly1.cif.gz_R structure of the human mcad:etf complex 0.8446 3 187
1o95-assembly1.cif.gz_F ternary complex between trimethylamine dehydrogenase and electron transferring flavoprotein 0.8422 2 187
3c6h-assembly2.cif.gz_B crystal structure of the rb49 gp17 nuclease domain 0.8329 72 108
ID Description Score Start End Superfamily
af_P9WNG9_2_185_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9475 2 187 3.40.50.620
af_P9WNG9_2_185_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9425 2 187 3.40.50.620
af_B4F8E3_32_223_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8911 5 187 3.40.50.620
1efpC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8765 4 187 3.40.50.620
af_A0A1D8PQF9_17_202_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8745 3 188 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A0F5VLG4-F1-model_v4 Electron transfer flavoprotein subunit alpha 0.9727 1 135 GO:0009055
GO:0033539
GO:0050660
AF-A0A5N5EB42-F1-model_v4 Electron transfer flavoprotein subunit alpha/FixB family protein 0.9703 1 174 GO:0009055
GO:0033539
GO:0050660
AF-A0A7K3RNU3-F1-model_v4 Electron transfer flavoprotein subunit alpha/FixB family protein 0.9699 1 105 GO:0009055
GO:0033539
GO:0050660
AF-A0A6B3HSB3-F1-model_v4 Electron transfer flavoprotein subunit alpha/FixB family protein 0.9678 15 145 GO:0009055
GO:0033539
GO:0050660
AF-A0A1C5BS54-F1-model_v4 Electron transfer flavoprotein alpha subunit 0.9677 1 195 GO:0009055
GO:0033539
GO:0050660

Map