F402428

General Info

Members Datasets Scaffolds Average Seq Length
313 212 305 309

Family's Representative Sequence

Representative Sequence 3300050508|nmdc:mga09592_1109_c1|nmdc:mga09592_1109_c1_19806_20885
Length 359
Sequence VRRIVVSFGKALGTFWPANFNKSNRFINGFPHGRRPRDAACSRPIGNGAMAMFVVCGEALMDVFGNGDTPTGMALDARVGGSPFNVALGLARLGQPVSFLGGVSSGFVGERLVQAMRAEGVGVGSVMRLDAPATLSLVGLDAQGVPSYAFYGDGCADRLLPVAALARVPPAARAFHVGSYAMVVQPVAQTLRALVERERARSLVAYDPNVRLNVEPDVARWRDVLHWMLPRAGLVKVSAEDLALLAPGATPADVAAHWIAQGVALVVVTHGAHGASAWTAARRVDAPAAPCTMVDTVGAGDTFQAALLAWLAEEQALSAAALRALDATQLERALRFAAGAAAITCSRRGADLPRRAELG

Samples

Sample ID Description Type Environment
1 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
2 2600255389 Pseudomonas sp. NFPP33 Isolate Rhizoplane
3 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
4 2738543013 Variovorax sp. BT01 Isolate Unclassified
5 2919501602 Pseudomonas alcaliphila 3512 Isolate Unclassified
6 2926063275 Pseudomonas sp. 3400 Isolate Unclassified
7 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
8 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
9 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
10 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
11 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
12 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
13 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
14 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
15 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
16 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
17 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
18 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
19 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
20 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
21 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
22 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
23 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
24 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
25 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
26 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
27 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
28 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
29 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
30 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
31 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
32 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
33 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
34 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
35 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
36 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
37 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
38 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
39 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
40 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
41 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
42 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
43 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
44 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
45 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
46 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
49 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
50 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
51 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
52 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
53 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
54 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
55 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
56 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
70 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
71 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
72 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
73 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
76 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
78 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
79 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
80 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
83 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
84 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
88 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
91 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
93 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
95 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
96 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
116 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
118 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
119 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
120 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
121 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
122 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
123 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
124 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
125 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
126 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
127 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
128 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
129 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
133 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
134 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
135 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
136 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
137 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
138 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
139 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
140 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
141 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
142 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
143 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
144 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
145 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
146 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
147 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
148 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
149 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
150 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
151 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
152 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
153 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
154 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
155 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
156 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
157 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
158 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
159 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
160 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
161 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
162 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
163 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
164 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
165 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
166 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
167 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
168 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
169 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
170 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
171 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
172 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
173 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
174 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
175 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
176 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
177 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
178 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
179 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
180 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
181 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
182 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
183 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
184 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
185 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
186 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
187 3300049128 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
188 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
189 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
190 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
191 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
192 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
193 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
194 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
195 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
196 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
197 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
198 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
199 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
200 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
201 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
202 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
203 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
204 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
205 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
206 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
207 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
208 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
209 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
210 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
211 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
212 8034962539 Pseudomonas sediminis PI11 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.12
Metatranscriptomes 0.32
Isolates 2.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 31.63
Nodule 0.64
Rhizoplane 8.31
Rhizosphere 50.16
Stem 0
Stem Tuber 0
Unclassified 9.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000297 3300002705 Bacteria 33397
2 JGI25156J39149_1009943 3300002705 Bacteria 2272
3 JGI25154J39366_1002297 3300002738 Bacteria 5146
4 JGI25157J39369_1000026 3300002741 Bacteria 148982
5 JGI25150J39212_1008552 3300002774 Bacteria 1996
6 JGI25159J45721_1001014 3300002987 Bacteria 12109
7 JGI25151J46595_10005783 3300003187 Bacteria 6330
8 JGI25153J46596_10009235 3300003215 Bacteria 4613
9 JGI25153J46596_10009509 3300003215 Bacteria 4505
10 rootH1_10080506 3300003316 Bacteria 3499
11 rootH2_10047845 3300003320 Bacteria 7179
12 rootH2_10065421 3300003320 Bacteria 1085
13 rootL2_10222739 3300003322 Bacteria 2777
14 rootH1_10090035 3300003323 Bacteria 4468
15 Ga0055539_1000316 3300003752 Bacteria 25144
16 Ga0055539_1000403 3300003752 Bacteria 16740
17 Ga0055533_1000048 3300003756 Bacteria 212106
18 Ga0055525_1000978 3300003759 Bacteria 7736
19 Ga0055535_1000508 3300003761 Bacteria 34490
20 Ga0055529_1000461 3300003763 Bacteria 39448
21 Ga0055526_1000867 3300003771 Bacteria 22551
22 Ga0055526_1002960 3300003771 Bacteria 11129
23 Ga0055537_1000992 3300003773 Bacteria 12855
24 Ga0055524_1000097 3300003775 Bacteria 108145
25 Ga0055524_1001346 3300003775 Bacteria 14318
26 Ga0055536_1006982 3300003781 Bacteria 5139
27 Ga0055534_1001103 3300003784 Bacteria 11481
28 Ga0055528_1000573 3300003790 Bacteria 27790
29 Ga0055530_10001788 3300003791 Bacteria 14935
30 Ga0055530_10002253 3300003791 Bacteria 12707
31 Ga0055540_1000023 3300003792 Bacteria 201131
32 Ga0055540_1000037 3300003792 Bacteria 162957
33 Ga0055531_10001254 3300003794 Bacteria 19241
34 Ga0055531_10012543 3300003794 Bacteria 3977
35 Ga0065165_1003246 3300005262 Bacteria 11779
36 Ga0070658_10016650 3300005327 Bacteria 5883
37 Ga0070658_10136540 3300005327 Bacteria 2046
38 Ga0070690_100012580 3300005330 Bacteria 4980
39 Ga0070666_10076411 3300005335 Bacteria 2285
40 Ga0070674_100104159 3300005356 Bacteria 2073
41 Ga0070673_100169294 3300005364 Bacteria 1864
42 Ga0070673_100261291 3300005364 Bacteria 1512
43 Ga0070659_100009750 3300005366 Bacteria 7058
44 Ga0070667_100027302 3300005367 Bacteria 4750
45 Ga0070662_100004183 3300005457 Bacteria 9093
46 Ga0070698_100022759 3300005471 Bacteria 6553
47 Ga0070699_100082422 3300005518 Bacteria 2804
48 Ga0070684_100084611 3300005535 Bacteria 2812
49 Ga0068853_100097884 3300005539 Bacteria 2591
50 Ga0070686_100150221 3300005544 Bacteria 1631
51 Ga0070665_100191587 3300005548 Bacteria 2045
52 Ga0070665_100260329 3300005548 Bacteria 1736
53 Ga0068855_100021228 3300005563 Bacteria 7786
54 Ga0068855_100130100 3300005563 Bacteria 2875
55 Ga0068857_100015514 3300005577 Bacteria 6657
56 Ga0068857_100284006 3300005577 Bacteria 1523
57 Ga0068854_100020344 3300005578 Bacteria 4489
58 Ga0068856_100023406 3300005614 Bacteria 6005
59 Ga0075363_100011594 3300006048 Bacteria 4226
60 Ga0075363_100062973 3300006048 Bacteria 2001
61 Ga0075366_10010317 3300006195 Bacteria 5242
62 Ga0075366_10017672 3300006195 Bacteria 4108
63 Ga0075366_10017921 3300006195 Bacteria 4085
64 Ga0075366_10019093 3300006195 Bacteria 3962
65 Ga0075370_10001133 3300006353 Bacteria 11185
66 Ga0075370_10011438 3300006353 Bacteria 4663
67 Ga0075370_10016893 3300006353 Bacteria 3935
68 Ga0075370_10064030 3300006353 Bacteria 2096
69 Ga0075370_10183363 3300006353 Bacteria 1232
70 Ga0075370_10201048 3300006353 Bacteria 1175
71 Ga0075370_10218935 3300006353 Unclassified 1125
72 Ga0075430_100229473 3300006846 Bacteria 1539
73 Ga0075431_100044193 3300006847 Bacteria 4595
74 Ga0075429_100037125 3300006880 Bacteria 4241
75 Ga0079104_1000019 3300006946 Bacteria 269313
76 Ga0105240_10061132 3300009093 Bacteria 4695
77 Ga0105240_10115391 3300009093 Bacteria 3242
78 Ga0105240_10140805 3300009093 Bacteria 2884
79 Ga0114129_10019439 3300009147 Bacteria 9671
80 Ga0114129_10022354 3300009147 Bacteria 8977
81 Ga0105242_10003098 3300009176 Bacteria 12972
82 Ga0105238_10092469 3300009551 Bacteria 3013
83 Ga0157369_10049024 3300013105 Bacteria 4580
84 Ga0163162_10043476 3300013306 Bacteria 4498
85 Ga0157372_10028600 3300013307 Bacteria 6085
86 Ga0157375_10401646 3300013308 Bacteria 1537
87 Ga0182008_10038869 3300014497 Bacteria 2379
88 Ga0157376_10351079 3300014969 Bacteria 1411
89 Ga0182006_1044811 3300015261 Bacteria 1724
90 Ga0182006_1051377 3300015261 Bacteria 1586
91 Ga0182007_10019654 3300015262 Bacteria 2425
92 Ga0183362_10001 3300015683 Bacteria 2046624
93 Ga0163161_10104592 3300017792 Bacteria 2110
94 Ga0163161_10153262 3300017792 Bacteria 1753
95 Ga0209674_100024 3300025226 Bacteria 535481
96 Ga0209563_100121 3300025230 Bacteria 130625
97 Ga0207427_100901 3300025231 Bacteria 12863
98 Ga0209258_100180 3300025242 Bacteria 137306
99 Ga0209258_100561 3300025242 Bacteria 32317
100 Ga0207425_1000454 3300025245 Bacteria 26617
101 Ga0209646_1000012 3300025246 Bacteria 573300
102 Ga0209026_1000004 3300025250 Bacteria 949012
103 Ga0209677_100139 3300025253 Bacteria 67508
104 Ga0209677_100181 3300025253 Bacteria 53044
105 Ga0209677_101758 3300025253 Bacteria 8979
106 Ga0209148_1002975 3300025254 Bacteria 5090
107 Ga0209759_1000003 3300025256 Bacteria 792130
108 Ga0209759_1000612 3300025256 Bacteria 34434
109 Ga0209129_1000119 3300025258 Bacteria 138904
110 Ga0209565_1000128 3300025263 Bacteria 108959
111 Ga0209455_1000144 3300025272 Bacteria 137313
112 Ga0209673_1000008 3300025273 Bacteria 626013
113 Ga0209673_1013477 3300025273 Bacteria 3222
114 Ga0209673_1017762 3300025273 Bacteria 2612
115 Ga0209130_1001248 3300025284 Bacteria 17775
116 Ga0209675_1000099 3300025291 Bacteria 128911
117 Ga0209676_1000023 3300025292 Bacteria 589732
118 Ga0209025_1004318 3300025294 Bacteria 12435
119 Ga0209564_1000024 3300025295 Bacteria 535041
120 Ga0209564_1000543 3300025295 Bacteria 60959
121 Ga0209758_1000194 3300025297 Bacteria 134196
122 Ga0209758_1000572 3300025297 Bacteria 57723
123 Ga0209050_1000022 3300025298 Bacteria 565239
124 Ga0209050_1000378 3300025298 Bacteria 83974
125 Ga0209050_1000489 3300025298 Bacteria 68506
126 Ga0209256_1000001 3300025299 Bacteria 2166974
127 Ga0209256_1000051 3300025299 Bacteria 307241
128 Ga0209256_1011400 3300025299 Bacteria 3560
129 Ga0207426_1001899 3300025302 Bacteria 15143
130 Ga0209051_1000013 3300025303 Bacteria 565239
131 Ga0209051_1000079 3300025303 Bacteria 201183
132 Ga0209257_1000042 3300025304 Bacteria 537149
133 Ga0209257_1000183 3300025304 Bacteria 156618
134 Ga0207680_10151993 3300025903 Bacteria 1544
135 Ga0207705_10019028 3300025909 Bacteria 4912
136 Ga0207705_10185805 3300025909 Bacteria 1570
137 Ga0207695_10005986 3300025913 Bacteria 15905
138 Ga0207695_10084616 3300025913 Bacteria 3202
139 Ga0207695_10353164 3300025913 Bacteria 1357
140 Ga0207649_10342704 3300025920 Bacteria 1104
141 Ga0207687_10303844 3300025927 Bacteria 1286
142 Ga0207690_10011696 3300025932 Bacteria 5248
143 Ga0207706_10092007 3300025933 Bacteria 2666
144 Ga0207686_10067016 3300025934 Bacteria 2295
145 Ga0207691_10246151 3300025940 Bacteria 1544
146 Ga0207667_10004415 3300025949 Bacteria 17214
147 Ga0207667_10029118 3300025949 Bacteria 5991
148 Ga0207651_10009657 3300025960 Bacteria 5300
149 Ga0207651_10196183 3300025960 Bacteria 1614
150 Ga0207640_10068758 3300025981 Bacteria 2375
151 Ga0207658_10026764 3300025986 Bacteria 4047
152 Ga0207639_10132537 3300026041 Bacteria 2065
153 Ga0207702_10000033 3300026078 Bacteria 166621
154 Ga0207702_10000039 3300026078 Bacteria 152825
155 Ga0207702_10000058 3300026078 Bacteria 130860
156 Ga0207674_10037935 3300026116 Bacteria 5006
157 Ga0207674_10267201 3300026116 Bacteria 1658
158 Ga0207683_10152891 3300026121 Bacteria 2083
159 Ga0209281_1000160 3300027111 Bacteria 161071
160 Ga0268266_10010326 3300028379 Bacteria 8169
161 Ga0268266_10211738 3300028379 Bacteria 1778
162 Ga0265336_10000122 3300028666 Bacteria 58047
163 Ga0307515_10000080 3300028794 Bacteria 224941
164 Ga0307515_10000137 3300028794 Bacteria 173516
165 Ga0307515_10000180 3300028794 Bacteria 156173
166 Ga0307515_10047411 3300028794 Bacteria 6532
167 Ga0265324_10002951 3300029957 Bacteria 8331
168 Ga0307511_10020618 3300030521 Bacteria 6236
169 Ga0265327_10008281 3300031251 Bacteria 7786
170 Ga0265327_10020855 3300031251 Bacteria 3976
171 Ga0307513_10020823 3300031456 Bacteria 7764
172 Ga0307513_10123807 3300031456 Bacteria 2546
173 Ga0307513_10207813 3300031456 Bacteria 1792
174 Ga0307516_10000973 3300031730 Bacteria 39600
175 Ga0307516_10001897 3300031730 Bacteria 28628
176 Ga0307516_10256003 3300031730 Bacteria 1443
177 Ga0307405_10045145 3300031731 Bacteria 2698
178 Ga0307405_10392438 3300031731 Bacteria 1084
179 Ga0307416_100520701 3300032002 Bacteria 1257
180 Ga0307414_10060680 3300032004 Bacteria 2676
181 Ga0307411_10194192 3300032005 Bacteria 1553
182 Ga0373934_0016849 3300035086 Bacteria 2782
183 Ga0395898_0326947 3300037466 Bacteria 1462
184 Ga0395905_0050280 3300037471 Bacteria 3905
185 Ga0395905_0200285 3300037471 Bacteria 1872
186 Ga0395905_0524686 3300037471 Bacteria 1085
187 Ga0395901_0010765 3300038443 Bacteria 9273
188 Ga0439436_0014720 3300041404 Bacteria 2356
189 Ga0439439_0001544 3300041406 Bacteria 4624
190 Ga0439465_0022976 3300041413 Bacteria 1960
191 Ga0451800_0013398 3300041459 Bacteria 3545
192 Ga0439433_0004201 3300041999 Bacteria 3093
193 Ga0439445_0000144 3300042004 Bacteria 12650
194 Ga0439445_0051310 3300042004 Bacteria 1114
195 Ga0439432_005525 3300042006 Bacteria 4548
196 Ga0439432_041107 3300042006 Bacteria 1465
197 Ga0439449_0002365 3300042007 Bacteria 7384
198 Ga0439449_0003669 3300042007 Bacteria 5958
199 Ga0439452_002617 3300042010 Bacteria 6578
200 Ga0439452_011186 3300042010 Bacteria 2587
201 Ga0439457_012887 3300042014 Bacteria 1882
202 Ga0439462_0035242 3300042015 Bacteria 1330
203 Ga0450923_016852 3300042125 Bacteria 1381
204 Ga0439446_0005840 3300042156 Bacteria 3182
205 Ga0439434_0005521 3300042435 Bacteria 3695
206 Ga0450918_000247 3300042531 Bacteria 12331
207 Ga0451577_0003152 3300042876 Bacteria 18570
208 Ga0451577_0015851 3300042876 Bacteria 6993
209 Ga0466969_0043781 3300044656 Bacteria 2229
210 Ga0466969_0050694 3300044656 Bacteria 2045
211 Ga0466965_0000144 3300044683 Bacteria 20908
212 Ga0466965_0039471 3300044683 Bacteria 2321
213 Ga0466965_0094003 3300044683 Bacteria 1527
214 Ga0466966_0002933 3300044684 Bacteria 11238
215 Ga0466966_0018864 3300044684 Bacteria 4544
216 Ga0466966_0236190 3300044684 Bacteria 1102
217 Ga0466961_0002198 3300044693 Bacteria 12138
218 Ga0466961_0006616 3300044693 Bacteria 7369
219 Ga0466961_0017217 3300044693 Bacteria 4642
220 Ga0466964_0015246 3300044706 Bacteria 2925
221 Ga0466964_0037801 3300044706 Bacteria 1940
222 Ga0466971_0005999 3300044719 Bacteria 5286
223 Ga0466971_0144013 3300044719 Bacteria 1110
224 Ga0466970_0004101 3300044765 Bacteria 7164
225 Ga0466957_0005762 3300044842 Bacteria 6959
226 Ga0466957_0060162 3300044842 Bacteria 2329
227 Ga0466959_0000054 3300045049 Bacteria 79861
228 Ga0466959_0087665 3300045049 Bacteria 2238
229 Ga0466958_0070523 3300045836 Bacteria 2138
230 Ga0466967_0133890 3300045976 Bacteria 2303
231 Ga0495638_0038601 3300046460 Bacteria 3033
232 Ga0495639_0005995 3300046475 Bacteria 5227
233 Ga0495639_0024639 3300046475 Bacteria 2649
234 Ga0495639_0061161 3300046475 Bacteria 1726
235 Ga0495583_0000090 3300046506 Bacteria 158988
236 Ga0495606_0002518 3300046507 Bacteria 21091
237 Ga0495632_0005966 3300046519 Bacteria 7935
238 Ga0495663_0004845 3300046525 Bacteria 3760
239 Ga0495621_0020265 3300046539 Bacteria 2180
240 Ga0495656_0000060 3300046615 Bacteria 52471
241 Ga0495668_0067771 3300046616 Bacteria 1963
242 Ga0495625_0003097 3300046660 Bacteria 16989
243 Ga0495588_0128762 3300046674 Bacteria 1335
244 Ga0495669_0008961 3300046684 Bacteria 4216
245 Ga0495649_0000724 3300046694 Bacteria 26823
246 Ga0495686_0003255 3300047472 Bacteria 14241
247 Ga0496100_0012954 3300048903 Bacteria 4796
248 Ga0496100_0057412 3300048903 Bacteria 2549
249 Ga0496101_0006344 3300048904 Bacteria 7612
250 Ga0496101_0079057 3300048904 Bacteria 2427
251 Ga0496102_0021838 3300048905 Bacteria 5665
252 Ga0496102_0077389 3300048905 Bacteria 3061
253 Ga0496102_0220612 3300048905 Bacteria 1787
254 Ga0496104_0252706 3300048907 Bacteria 1675
255 Ga0496105_0074323 3300048908 Bacteria 2807
256 Ga0496105_0134811 3300048908 Bacteria 2034
257 Ga0496106_0080006 3300048909 Bacteria 2509
258 Ga0496106_0105045 3300048909 Bacteria 2194
259 Ga0496107_0205258 3300048910 Bacteria 1465
260 Ga0496108_0212357 3300048911 Bacteria 1680
261 Ga0496108_0347559 3300048911 Bacteria 1294
262 Ga0496109_0077494 3300048912 Bacteria 3059
263 Ga0496110_0039416 3300048913 Bacteria 4113
264 Ga0496110_0058428 3300048913 Bacteria 3397
265 Ga0496110_0363538 3300048913 Bacteria 1318
266 Ga0496111_0124372 3300048914 Bacteria 1906
267 Ga0496113_0205084 3300048916 Bacteria 1568
268 Ga0496114_0026911 3300048917 Bacteria 4711
269 Ga0496114_0364317 3300048917 Bacteria 1279
270 Ga0496126_0323604 3300048929 Bacteria 1267
271 Ga0501308_003624 3300049128 Bacteria 1441
272 Ga0501079_0300013 3300049741 Bacteria 1257
273 Ga0501241_026687 3300049758 Bacteria 1078
274 Ga0501265_002165 3300049762 Bacteria 2233
275 nmdc:mga03n38_105246_c1 3300050490 Bacteria 1366
276 nmdc:mga03n38_91656_c1 3300050490 Bacteria 1448
277 nmdc:mga0yw44_143509_c1 3300050492 Bacteria 1553
278 nmdc:mga0k408_34762_c1 3300050493 Bacteria 2887
279 nmdc:mga0k408_36113_c1 3300050493 Bacteria 2836
280 nmdc:mga0k408_9518_c1 3300050493 Bacteria 5241
281 nmdc:mga07m45_1453_c1 3300050496 Bacteria 10865
282 nmdc:mga07m45_18090_c1 3300050496 Bacteria 3797
283 nmdc:mga07m45_22024_c1 3300050496 Bacteria 3477
284 nmdc:mga07m45_46704_c1 3300050496 Bacteria 2433
285 nmdc:mga09592_1109_c1 3300050508 Bacteria 21409
286 nmdc:mga09592_32070_c1 3300050508 Bacteria 4379
287 nmdc:mga0qj67_25415_c1 3300050509 Bacteria 4575
288 nmdc:mga06r32_85760_c1 3300050510 Bacteria 3070
289 Ga0500635_0000018 3300053080 Bacteria 112805
290 Ga0500578_0000057 3300053086 Bacteria 120178
291 Ga0500644_0050018 3300053088 Bacteria 1429
292 Ga0500651_0052399 3300053093 Bacteria 2558
293 Ga0500650_0026014 3300053098 Bacteria 2622
294 Ga0500569_028612 3300053109 Bacteria 1546
295 Ga0500628_002130 3300053129 Bacteria 3304
296 Ga0500642_0001435 3300053130 Bacteria 6831
297 Ga0500642_0089009 3300053130 Bacteria 1425
298 Ga0500652_000112 3300053131 Bacteria 31738
299 Ga0500559_0007681 3300053136 Bacteria 4761
300 Ga0500589_136969 3300053147 Bacteria 1014
301 Ga0500604_0016839 3300053151 Bacteria 2016
302 Ga0500604_0054433 3300053151 Bacteria 1242
303 Ga0500622_0000187 3300053156 Bacteria 65366
304 Ga0466962_0077141 3300061719 Bacteria 1592
305 Ga0466962_0078720 3300061719 Bacteria 1575

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049741 Ga0501079_0300013 Ga0501079_0300013_17_916 288
2 3300046475 Ga0495639_0024639 Ga0495639_0024639_338_1264 298
3 3300005471 Ga0070698_100022759 Ga0070698_1000227592 299
4 3300005518 Ga0070699_100082422 Ga0070699_1000824222 299
5 3300006846 Ga0075430_100229473 Ga0075430_1002294732 299
6 3300006847 Ga0075431_100044193 Ga0075431_1000441932 299
7 3300049758 Ga0501241_026687 Ga0501241_026687_158_1060 300
8 iso_pu_bacteria 2643221654 2644303664 304
9 iso_pu_bacteria 2738543013 2739247934 304
10 iso_pu_bacteria 2600254954 2600446271 306
11 iso_pu_bacteria 2600255389 2602012701 306
12 iso_pu_bacteria 2919501602 2919503050 306
13 iso_pu_bacteria 2926063275 2926064723 306
14 iso_pu_bacteria 8034962539 8034964477 306
15 3300005262 Ga0065165_1003246 Ga0065165_10032467 307
16 3300025273 Ga0209673_1017762 Ga0209673_10177622 307
17 3300025298 Ga0209050_1000489 Ga0209050_100048918 307
18 3300002774 JGI25150J39212_1008552 JGI25150J39212_10085521 308
19 3300002987 JGI25159J45721_1001014 JGI25159J45721_10010144 308
20 3300003187 JGI25151J46595_10005783 JGI25151J46595_100057833 308
21 3300003215 JGI25153J46596_10009235 JGI25153J46596_100092353 308
22 3300003215 JGI25153J46596_10009509 JGI25153J46596_100095094 308
23 3300003320 rootH2_10065421 rootH2_100654211 308
24 3300003771 Ga0055526_1000867 Ga0055526_100086715 308
25 3300003771 Ga0055526_1002960 Ga0055526_10029605 308
26 3300003773 Ga0055537_1000992 Ga0055537_10009924 308
27 3300003775 Ga0055524_1000097 Ga0055524_100009732 308
28 3300003775 Ga0055524_1001346 Ga0055524_10013469 308
29 3300003781 Ga0055536_1006982 Ga0055536_10069823 308
30 3300003784 Ga0055534_1001103 Ga0055534_10011038 308
31 3300003790 Ga0055528_1000573 Ga0055528_100057324 308
32 3300003791 Ga0055530_10001788 Ga0055530_100017887 308
33 3300003791 Ga0055530_10002253 Ga0055530_100022539 308
34 3300003792 Ga0055540_1000023 Ga0055540_1000023119 308
35 3300003792 Ga0055540_1000037 Ga0055540_10000376 308
36 3300003794 Ga0055531_10001254 Ga0055531_1000125418 308
37 3300003794 Ga0055531_10012543 Ga0055531_100125434 308
38 3300005327 Ga0070658_10136540 Ga0070658_101365401 308
39 3300005335 Ga0070666_10076411 Ga0070666_100764112 308
40 3300005364 Ga0070673_100261291 Ga0070673_1002612912 308
41 3300005367 Ga0070667_100027302 Ga0070667_1000273023 308
42 3300005548 Ga0070665_100260329 Ga0070665_1002603292 308
43 3300006048 Ga0075363_100062973 Ga0075363_1000629732 308
44 3300006195 Ga0075366_10017672 Ga0075366_100176723 308
45 3300006195 Ga0075366_10017921 Ga0075366_100179216 308
46 3300006353 Ga0075370_10016893 Ga0075370_100168932 308
47 3300006353 Ga0075370_10064030 Ga0075370_100640302 308
48 3300006353 Ga0075370_10201048 Ga0075370_102010482 308
49 3300006880 Ga0075429_100037125 Ga0075429_1000371254 308
50 3300006946 Ga0079104_1000019 Ga0079104_100001964 308
51 3300009147 Ga0114129_10019439 Ga0114129_100194394 308
52 3300009147 Ga0114129_10022354 Ga0114129_100223545 308
53 3300009176 Ga0105242_10003098 Ga0105242_100030984 308
54 3300013306 Ga0163162_10043476 Ga0163162_100434761 308
55 3300013308 Ga0157375_10401646 Ga0157375_104016461 308
56 3300014497 Ga0182008_10038869 Ga0182008_100388694 308
57 3300014969 Ga0157376_10351079 Ga0157376_103510791 308
58 3300015261 Ga0182006_1044811 Ga0182006_10448111 308
59 3300015261 Ga0182006_1051377 Ga0182006_10513772 308
60 3300015262 Ga0182007_10019654 Ga0182007_100196544 308
61 3300015683 Ga0183362_10001 Ga0183362_100011976 308
62 3300017792 Ga0163161_10104592 Ga0163161_101045922 308
63 3300017792 Ga0163161_10153262 Ga0163161_101532621 308
64 3300025245 Ga0207425_1000454 Ga0207425_100045424 308
65 3300025258 Ga0209129_1000119 Ga0209129_100011946 308
66 3300025263 Ga0209565_1000128 Ga0209565_10001285 308
67 3300025273 Ga0209673_1000008 Ga0209673_100000828 308
68 3300025273 Ga0209673_1013477 Ga0209673_10134772 308
69 3300025284 Ga0209130_1001248 Ga0209130_100124810 308
70 3300025291 Ga0209675_1000099 Ga0209675_100009968 308
71 3300025292 Ga0209676_1000023 Ga0209676_1000023406 308
72 3300025294 Ga0209025_1004318 Ga0209025_10043186 308
73 3300025295 Ga0209564_1000024 Ga0209564_100002446 308
74 3300025295 Ga0209564_1000543 Ga0209564_100054316 308
75 3300025297 Ga0209758_1000194 Ga0209758_1000194121 308
76 3300025297 Ga0209758_1000572 Ga0209758_100057247 308
77 3300025298 Ga0209050_1000022 Ga0209050_1000022388 308
78 3300025298 Ga0209050_1000378 Ga0209050_10003789 308
79 3300025299 Ga0209256_1000001 Ga0209256_10000011874 308
80 3300025299 Ga0209256_1000051 Ga0209256_100005167 308
81 3300025299 Ga0209256_1011400 Ga0209256_10114002 308
82 3300025302 Ga0207426_1001899 Ga0207426_10018999 308
83 3300025303 Ga0209051_1000013 Ga0209051_1000013388 308
84 3300025303 Ga0209051_1000079 Ga0209051_100007968 308
85 3300025304 Ga0209257_1000042 Ga0209257_100004299 308
86 3300025304 Ga0209257_1000183 Ga0209257_100018326 308
87 3300025903 Ga0207680_10151993 Ga0207680_101519932 308
88 3300025909 Ga0207705_10185805 Ga0207705_101858051 308
89 3300025934 Ga0207686_10067016 Ga0207686_100670162 308
90 3300025960 Ga0207651_10196183 Ga0207651_101961832 308
91 3300025986 Ga0207658_10026764 Ga0207658_100267644 308
92 3300026121 Ga0207683_10152891 Ga0207683_101528913 308
93 3300027111 Ga0209281_1000160 Ga0209281_100016064 308
94 3300028379 Ga0268266_10211738 Ga0268266_102117382 308
95 3300028794 Ga0307515_10000080 Ga0307515_10000080148 308
96 3300028794 Ga0307515_10000180 Ga0307515_1000018083 308
97 3300028794 Ga0307515_10047411 Ga0307515_100474115 308
98 3300031251 Ga0265327_10008281 Ga0265327_100082817 308
99 3300031251 Ga0265327_10020855 Ga0265327_100208552 308
100 3300031456 Ga0307513_10020823 Ga0307513_100208235 308
101 3300031456 Ga0307513_10123807 Ga0307513_101238072 308
102 3300031730 Ga0307516_10000973 Ga0307516_1000097318 308
103 3300031730 Ga0307516_10256003 Ga0307516_102560032 308
104 3300031731 Ga0307405_10045145 Ga0307405_100451451 308
105 3300037471 Ga0395905_0050280 Ga0395905_0050280_2644_3570 308
106 3300041404 Ga0439436_0014720 Ga0439436_0014720_425_1357 308
107 3300041406 Ga0439439_0001544 Ga0439439_0001544_3174_4106 308
108 3300041413 Ga0439465_0022976 Ga0439465_0022976_821_1747 308
109 3300041459 Ga0451800_0013398 Ga0451800_0013398_2426_3352 308
110 3300041999 Ga0439433_0004201 Ga0439433_0004201_618_1544 308
111 3300042004 Ga0439445_0000144 Ga0439445_0000144_466_1392 308
112 3300042004 Ga0439445_0051310 Ga0439445_0051310_177_1103 308
113 3300042006 Ga0439432_005525 Ga0439432_005525_2597_3523 308
114 3300042006 Ga0439432_041107 Ga0439432_041107_355_1287 308
115 3300042007 Ga0439449_0002365 Ga0439449_0002365_4840_5766 308
116 3300042007 Ga0439449_0003669 Ga0439449_0003669_4740_5666 308
117 3300042010 Ga0439452_002617 Ga0439452_002617_3234_4160 308
118 3300042010 Ga0439452_011186 Ga0439452_011186_510_1442 308
119 3300042014 Ga0439457_012887 Ga0439457_012887_100_1026 308
120 3300042015 Ga0439462_0035242 Ga0439462_0035242_312_1244 308
121 3300042125 Ga0450923_016852 Ga0450923_016852_279_1211 308
122 3300042156 Ga0439446_0005840 Ga0439446_0005840_288_1214 308
123 3300042435 Ga0439434_0005521 Ga0439434_0005521_2753_3685 308
124 3300042531 Ga0450918_000247 Ga0450918_000247_7034_7960 308
125 3300042876 Ga0451577_0003152 Ga0451577_0003152_13783_14709 308
126 3300042876 Ga0451577_0015851 Ga0451577_0015851_2553_3479 308
127 3300044656 Ga0466969_0043781 Ga0466969_0043781_1041_1967 308
128 3300044683 Ga0466965_0094003 Ga0466965_0094003_302_1228 308
129 3300044684 Ga0466966_0018864 Ga0466966_0018864_2387_3313 308
130 3300044684 Ga0466966_0236190 Ga0466966_0236190_136_1062 308
131 3300044693 Ga0466961_0002198 Ga0466961_0002198_9090_10016 308
132 3300044693 Ga0466961_0006616 Ga0466961_0006616_482_1408 308
133 3300044706 Ga0466964_0015246 Ga0466964_0015246_1725_2651 308
134 3300044719 Ga0466971_0005999 Ga0466971_0005999_4284_5210 308
135 3300044765 Ga0466970_0004101 Ga0466970_0004101_220_1146 308
136 3300045049 Ga0466959_0000054 Ga0466959_0000054_39823_40749 308
137 3300045836 Ga0466958_0070523 Ga0466958_0070523_815_1741 308
138 3300045976 Ga0466967_0133890 Ga0466967_0133890_211_1137 308
139 3300046460 Ga0495638_0038601 Ga0495638_0038601_334_1260 308
140 3300046475 Ga0495639_0061161 Ga0495639_0061161_164_1090 308
141 3300046519 Ga0495632_0005966 Ga0495632_0005966_4644_5570 308
142 3300046525 Ga0495663_0004845 Ga0495663_0004845_2035_2961 308
143 3300046539 Ga0495621_0020265 Ga0495621_0020265_417_1343 308
144 3300046615 Ga0495656_0000060 Ga0495656_0000060_36817_37743 308
145 3300046674 Ga0495588_0128762 Ga0495588_0128762_312_1238 308
146 3300048903 Ga0496100_0012954 Ga0496100_0012954_3605_4531 308
147 3300048903 Ga0496100_0057412 Ga0496100_0057412_133_1059 308
148 3300048904 Ga0496101_0006344 Ga0496101_0006344_1921_2847 308
149 3300048904 Ga0496101_0079057 Ga0496101_0079057_854_1780 308
150 3300048905 Ga0496102_0077389 Ga0496102_0077389_1544_2470 308
151 3300048905 Ga0496102_0220612 Ga0496102_0220612_614_1540 308
152 3300048907 Ga0496104_0252706 Ga0496104_0252706_36_962 308
153 3300048908 Ga0496105_0074323 Ga0496105_0074323_494_1420 308
154 3300048908 Ga0496105_0134811 Ga0496105_0134811_644_1570 308
155 3300048909 Ga0496106_0080006 Ga0496106_0080006_1548_2474 308
156 3300048909 Ga0496106_0105045 Ga0496106_0105045_703_1629 308
157 3300048910 Ga0496107_0205258 Ga0496107_0205258_287_1213 308
158 3300048911 Ga0496108_0212357 Ga0496108_0212357_642_1568 308
159 3300048911 Ga0496108_0347559 Ga0496108_0347559_29_955 308
160 3300048912 Ga0496109_0077494 Ga0496109_0077494_756_1682 308
161 3300048913 Ga0496110_0039416 Ga0496110_0039416_2889_3815 308
162 3300048913 Ga0496110_0058428 Ga0496110_0058428_1980_2906 308
163 3300048913 Ga0496110_0363538 Ga0496110_0363538_219_1145 308
164 3300048914 Ga0496111_0124372 Ga0496111_0124372_207_1133 308
165 3300048916 Ga0496113_0205084 Ga0496113_0205084_469_1395 308
166 3300048917 Ga0496114_0026911 Ga0496114_0026911_2552_3478 308
167 3300048917 Ga0496114_0364317 Ga0496114_0364317_127_1053 308
168 3300049128 Ga0501308_003624 Ga0501308_003624_483_1409 308
169 3300050490 nmdc:mga03n38_91656_c1 nmdc:mga03n38_91656_c1_453_1379 308
170 3300050493 nmdc:mga0k408_34762_c1 nmdc:mga0k408_34762_c1_1515_2441 308
171 3300050493 nmdc:mga0k408_36113_c1 nmdc:mga0k408_36113_c1_399_1325 308
172 3300050496 nmdc:mga07m45_18090_c1 nmdc:mga07m45_18090_c1_279_1205 308
173 3300050496 nmdc:mga07m45_22024_c1 nmdc:mga07m45_22024_c1_1898_2824 308
174 3300050508 nmdc:mga09592_1109_c1 nmdc:mga09592_1109_c1_19806_20885 308
175 3300050508 nmdc:mga09592_32070_c1 nmdc:mga09592_32070_c1_986_1975 308
176 3300050509 nmdc:mga0qj67_25415_c1 nmdc:mga0qj67_25415_c1_764_1753 308
177 3300050510 nmdc:mga06r32_85760_c1 nmdc:mga06r32_85760_c1_275_1264 308
178 3300053093 Ga0500651_0052399 Ga0500651_0052399_1096_2022 308
179 3300053098 Ga0500650_0026014 Ga0500650_0026014_430_1356 308
180 3300053109 Ga0500569_028612 Ga0500569_028612_422_1348 308
181 3300053129 Ga0500628_002130 Ga0500628_002130_2093_3019 308
182 3300053130 Ga0500642_0001435 Ga0500642_0001435_2512_3438 308
183 3300053130 Ga0500642_0089009 Ga0500642_0089009_360_1286 308
184 3300053131 Ga0500652_000112 Ga0500652_000112_7603_8529 308
185 3300053151 Ga0500604_0016839 Ga0500604_0016839_208_1134 308
186 3300053151 Ga0500604_0054433 Ga0500604_0054433_266_1192 308
187 3300053156 Ga0500622_0000187 Ga0500622_0000187_9400_10326 308
188 3300061719 Ga0466962_0078720 Ga0466962_0078720_608_1534 308
189 3300005356 Ga0070674_100104159 Ga0070674_1001041592 309
190 3300005548 Ga0070665_100191587 Ga0070665_1001915873 309
191 3300006353 Ga0075370_10011438 Ga0075370_100114384 309
192 3300025940 Ga0207691_10246151 Ga0207691_102461512 309
193 3300028379 Ga0268266_10010326 Ga0268266_100103264 309
194 3300028794 Ga0307515_10000137 Ga0307515_10000137171 309
195 3300031456 Ga0307513_10207813 Ga0307513_102078132 309
196 3300031731 Ga0307405_10392438 Ga0307405_103924381 309
197 3300032002 Ga0307416_100520701 Ga0307416_1005207011 309
198 3300032005 Ga0307411_10194192 Ga0307411_101941921 309
199 3300048905 Ga0496102_0021838 Ga0496102_0021838_3073_4002 309
200 3300049762 Ga0501265_002165 Ga0501265_002165_311_1240 309
201 3300053086 Ga0500578_0000057 Ga0500578_0000057_17825_18754 309
202 iso_pu_bacteria 2939669807 2939670513 309
203 3300002705 JGI25156J39149_1000297 JGI25156J39149_100029711 310
204 3300002705 JGI25156J39149_1009943 JGI25156J39149_10099432 310
205 3300002738 JGI25154J39366_1002297 JGI25154J39366_10022975 310
206 3300002741 JGI25157J39369_1000026 JGI25157J39369_100002643 310
207 3300003316 rootH1_10080506 rootH1_100805064 310
208 3300003320 rootH2_10047845 rootH2_100478452 310
209 3300003322 rootL2_10222739 rootL2_102227392 310
210 3300003323 rootH1_10090035 rootH1_100900352 310
211 3300003752 Ga0055539_1000316 Ga0055539_100031617 310
212 3300003752 Ga0055539_1000403 Ga0055539_10004035 310
213 3300003756 Ga0055533_1000048 Ga0055533_1000048129 310
214 3300003759 Ga0055525_1000978 Ga0055525_10009782 310
215 3300003761 Ga0055535_1000508 Ga0055535_100050821 310
216 3300003763 Ga0055529_1000461 Ga0055529_10004615 310
217 3300005327 Ga0070658_10016650 Ga0070658_100166505 310
218 3300005330 Ga0070690_100012580 Ga0070690_1000125806 310
219 3300005364 Ga0070673_100169294 Ga0070673_1001692942 310
220 3300005366 Ga0070659_100009750 Ga0070659_1000097504 310
221 3300005457 Ga0070662_100004183 Ga0070662_1000041832 310
222 3300005535 Ga0070684_100084611 Ga0070684_1000846113 310
223 3300005539 Ga0068853_100097884 Ga0068853_1000978842 310
224 3300005544 Ga0070686_100150221 Ga0070686_1001502212 310
225 3300005563 Ga0068855_100021228 Ga0068855_1000212285 310
226 3300005563 Ga0068855_100130100 Ga0068855_1001301002 310
227 3300005577 Ga0068857_100015514 Ga0068857_1000155143 310
228 3300005577 Ga0068857_100284006 Ga0068857_1002840062 310
229 3300005578 Ga0068854_100020344 Ga0068854_1000203442 310
230 3300005614 Ga0068856_100023406 Ga0068856_1000234063 310
231 3300006048 Ga0075363_100011594 Ga0075363_1000115942 310
232 3300006195 Ga0075366_10010317 Ga0075366_100103174 310
233 3300006195 Ga0075366_10019093 Ga0075366_100190932 310
234 3300006353 Ga0075370_10001133 Ga0075370_100011337 310
235 3300006353 Ga0075370_10183363 Ga0075370_101833632 310
236 3300006353 Ga0075370_10218935 Ga0075370_102189351 310
237 3300009093 Ga0105240_10061132 Ga0105240_100611322 310
238 3300009093 Ga0105240_10115391 Ga0105240_101153912 310
239 3300009093 Ga0105240_10140805 Ga0105240_101408053 310
240 3300009551 Ga0105238_10092469 Ga0105238_100924693 310
241 3300013105 Ga0157369_10049024 Ga0157369_100490243 310
242 3300013307 Ga0157372_10028600 Ga0157372_100286002 310
243 3300025226 Ga0209674_100024 Ga0209674_100024424 310
244 3300025230 Ga0209563_100121 Ga0209563_10012161 310
245 3300025231 Ga0207427_100901 Ga0207427_10090112 310
246 3300025242 Ga0209258_100180 Ga0209258_1001806 310
247 3300025242 Ga0209258_100561 Ga0209258_1005612 310
248 3300025246 Ga0209646_1000012 Ga0209646_100001289 310
249 3300025250 Ga0209026_1000004 Ga0209026_1000004527 310
250 3300025253 Ga0209677_100139 Ga0209677_10013911 310
251 3300025253 Ga0209677_100181 Ga0209677_10018140 310
252 3300025253 Ga0209677_101758 Ga0209677_1017583 310
253 3300025254 Ga0209148_1002975 Ga0209148_10029753 310
254 3300025256 Ga0209759_1000003 Ga0209759_1000003197 310
255 3300025256 Ga0209759_1000612 Ga0209759_10006126 310
256 3300025272 Ga0209455_1000144 Ga0209455_10001446 310
257 3300025909 Ga0207705_10019028 Ga0207705_100190285 310
258 3300025913 Ga0207695_10005986 Ga0207695_100059863 310
259 3300025913 Ga0207695_10084616 Ga0207695_100846162 310
260 3300025913 Ga0207695_10353164 Ga0207695_103531641 310
261 3300025920 Ga0207649_10342704 Ga0207649_103427041 310
262 3300025927 Ga0207687_10303844 Ga0207687_103038442 310
263 3300025932 Ga0207690_10011696 Ga0207690_100116962 310
264 3300025933 Ga0207706_10092007 Ga0207706_100920072 310
265 3300025949 Ga0207667_10004415 Ga0207667_100044155 310
266 3300025949 Ga0207667_10029118 Ga0207667_100291183 310
267 3300025960 Ga0207651_10009657 Ga0207651_100096572 310
268 3300025981 Ga0207640_10068758 Ga0207640_100687582 310
269 3300026041 Ga0207639_10132537 Ga0207639_101325372 310
270 3300026078 Ga0207702_10000033 Ga0207702_1000003354 310
271 3300026078 Ga0207702_10000039 Ga0207702_1000003994 310
272 3300026078 Ga0207702_10000058 Ga0207702_1000005875 310
273 3300026116 Ga0207674_10037935 Ga0207674_100379354 310
274 3300026116 Ga0207674_10267201 Ga0207674_102672012 310
275 3300028666 Ga0265336_10000122 Ga0265336_1000012213 310
276 3300029957 Ga0265324_10002951 Ga0265324_100029515 310
277 3300030521 Ga0307511_10020618 Ga0307511_100206182 310
278 3300031730 Ga0307516_10001897 Ga0307516_100018976 310
279 3300032004 Ga0307414_10060680 Ga0307414_100606802 310
280 3300035086 Ga0373934_0016849 Ga0373934_0016849_1413_2345 310
281 3300037466 Ga0395898_0326947 Ga0395898_0326947_238_1170 310
282 3300037471 Ga0395905_0200285 Ga0395905_0200285_199_1131 310
283 3300037471 Ga0395905_0524686 Ga0395905_0524686_122_1054 310
284 3300038443 Ga0395901_0010765 Ga0395901_0010765_5983_6915 310
285 3300044656 Ga0466969_0050694 Ga0466969_0050694_207_1139 310
286 3300044683 Ga0466965_0000144 Ga0466965_0000144_9311_10243 310
287 3300044683 Ga0466965_0039471 Ga0466965_0039471_551_1483 310
288 3300044684 Ga0466966_0002933 Ga0466966_0002933_3677_4609 310
289 3300044693 Ga0466961_0017217 Ga0466961_0017217_2399_3331 310
290 3300044706 Ga0466964_0037801 Ga0466964_0037801_437_1369 310
291 3300044719 Ga0466971_0144013 Ga0466971_0144013_93_1025 310
292 3300044842 Ga0466957_0005762 Ga0466957_0005762_3690_4622 310
293 3300044842 Ga0466957_0060162 Ga0466957_0060162_173_1105 310
294 3300045049 Ga0466959_0087665 Ga0466959_0087665_1032_1964 310
295 3300046475 Ga0495639_0005995 Ga0495639_0005995_1607_2539 310
296 3300046506 Ga0495583_0000090 Ga0495583_0000090_101623_102555 310
297 3300046507 Ga0495606_0002518 Ga0495606_0002518_2965_3897 310
298 3300046616 Ga0495668_0067771 Ga0495668_0067771_471_1403 310
299 3300046660 Ga0495625_0003097 Ga0495625_0003097_14726_15658 310
300 3300046684 Ga0495669_0008961 Ga0495669_0008961_2341_3273 310
301 3300046694 Ga0495649_0000724 Ga0495649_0000724_15042_15974 310
302 3300047472 Ga0495686_0003255 Ga0495686_0003255_525_1457 310
303 3300048929 Ga0496126_0323604 Ga0496126_0323604_101_1033 310
304 3300050490 nmdc:mga03n38_105246_c1 nmdc:mga03n38_105246_c1_334_1332 310
305 3300050492 nmdc:mga0yw44_143509_c1 nmdc:mga0yw44_143509_c1_57_1055 310
306 3300050493 nmdc:mga0k408_9518_c1 nmdc:mga0k408_9518_c1_1039_1971 310
307 3300050496 nmdc:mga07m45_1453_c1 nmdc:mga07m45_1453_c1_4897_5829 310
308 3300050496 nmdc:mga07m45_46704_c1 nmdc:mga07m45_46704_c1_1367_2308 310
309 3300053080 Ga0500635_0000018 Ga0500635_0000018_96733_97665 310
310 3300053088 Ga0500644_0050018 Ga0500644_0050018_174_1118 310
311 3300053136 Ga0500559_0007681 Ga0500559_0007681_1598_2530 310
312 3300053147 Ga0500589_136969 Ga0500589_136969_29_961 310
313 3300061719 Ga0466962_0077141 Ga0466962_0077141_37_969 310

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00294

PfkB

pfkB family carbohydrate kinase

50

356

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u7x-assembly1.cif.gz_A crystal structure of fructokinase from brucella abortus 2308 0.9459 1 309
4u7x-assembly1.cif.gz_A crystal structure of fructokinase from brucella abortus 2308 0.937 1 309
7fca-assembly1.cif.gz_E pfkb(mycobacterium marinum) 0.9127 2 300
7cf8-assembly1.cif.gz_E pfkb(mycobacterium marinum) 0.912 2 300
7fca-assembly1.cif.gz_C pfkb(mycobacterium marinum) 0.9077 2 300
ID Description Score Start End Superfamily
4u7xA00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9459 1 309 3.40.1190.20
4u7xA00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.937 1 309 3.40.1190.20
af_Q2FWM2_2_319_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9057 1 307 3.40.1190.20
af_C6TGN8_61_381_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8963 2 307 3.40.1190.20
af_Q2FWM2_2_319_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8949 1 307 3.40.1190.20
ID Description Score Start End GO Terms
AF-A0A2G9WP20-F1-model_v4 Carbohydrate kinase 0.9851 215 306 GO:0016301
AF-L8BA29-F1-model_v4 PfkB domain protein (Modular protein) 0.9743 1 308 GO:0016301
AF-A0A651EDN9-F1-model_v4 Carbohydrate kinase 0.9715 1 310 GO:0016301
AF-A0A257Q4A4-F1-model_v4 Carbohydrate kinase PfkB domain-containing protein 0.9689 1 307 GO:0016301
AF-S2F5B9-F1-model_v4 Sugar kinase, ribokinase 0.9686 1 308 GO:0006796
GO:0016301

Feature Viewer

pLDDT pTM Quality
93.41 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map