F401256

General Info

Members Datasets Scaffolds Average Seq Length
311 195 622 231

Family's Representative Sequence

Representative Sequence 3300026041|Ga0207639_10426906|Ga0207639_104269062
Length 266
Sequence VVPRDDRDTRAAAGDPTEEVLTAGVVDAVRRRPARTVVGRLLQPHVHRLALVRETISRHQALGGWGHPVTVVAVTKSHGPDAVRAACTAGLGVVGENRVQEALAKQDQLADVPVEWHLIGTLQRNKARHAVGRFALIHSVDRLDLARELDRRVPEGRRQAILVQVNCSNEPQKGGVEPEGVGTLLDDLRGLGRLEVRGLMTMAALTDDVAEQRRSFRLLRSLRDQATAAGHSLPELSMGMSADYAVAVEEGASMIRLGTILFGERS

Samples

Sample ID Description Type Environment
1 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
101 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
102 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
103 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
106 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
107 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
108 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
109 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
110 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
113 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
114 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
115 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
116 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
117 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
118 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
119 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
123 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
124 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
125 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
126 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
127 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
128 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
129 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
130 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
131 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
134 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
135 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
136 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
137 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
138 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
139 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
140 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
143 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
150 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
151 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
152 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
153 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
154 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
155 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
162 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
163 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
164 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
165 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
166 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
167 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
168 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
169 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
170 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
171 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
172 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
173 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
174 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
175 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
176 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
177 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
178 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
179 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
180 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
181 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
184 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
185 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
186 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
187 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
188 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
189 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
190 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
191 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
192 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
193 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
195 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.68
Metatranscriptomes 0.32
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.4
Rhizosphere 91.64
Stem 0
Stem Tuber 0
Unclassified 18.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207639_10426906 3300026041 Bacteria 1199
2 JGI25405J52794_10006410 3300003911 Bacteria 2150
3 Ga0058859_11381097 3300004798 Bacteria 2525
4 Ga0070676_10001218 3300005328 Bacteria 12913
5 Ga0070683_100100008 3300005329 Bacteria 2730
6 Ga0068869_100020939 3300005334 Bacteria 4493
7 Ga0068869_100142229 3300005334 Bacteria 1853
8 Ga0070660_100203546 3300005339 Unclassified 1606
9 Ga0070668_100512665 3300005347 Bacteria 1040
10 Ga0070675_100090962 3300005354 Bacteria 2556
11 Ga0070674_100000059 3300005356 Bacteria 48494
12 Ga0070673_100116371 3300005364 Unclassified 2224
13 Ga0070667_100107490 3300005367 Bacteria 2416
14 Ga0070701_10203274 3300005438 Bacteria 1172
15 Ga0070711_100000200 3300005439 Bacteria 31665
16 Ga0070711_100061585 3300005439 Unclassified 2613
17 Ga0070705_100003424 3300005440 Bacteria 7779
18 Ga0070705_100177953 3300005440 Unclassified 1438
19 Ga0070694_100071721 3300005444 Unclassified 2388
20 Ga0070694_100224469 3300005444 Bacteria 1410
21 Ga0070708_100423748 3300005445 Unclassified 1255
22 Ga0070678_100001819 3300005456 Bacteria 11499
23 Ga0070662_100001077 3300005457 Bacteria 16629
24 Ga0070662_100197242 3300005457 Unclassified 1595
25 Ga0068867_100044338 3300005459 Unclassified 3258
26 Ga0070706_100518056 3300005467 Unclassified 1109
27 Ga0070707_100167427 3300005468 Bacteria 2142
28 Ga0070698_100003683 3300005471 Bacteria 16819
29 Ga0070699_100001155 3300005518 Bacteria 24501
30 Ga0070699_100455728 3300005518 Bacteria 1160
31 Ga0070679_100632049 3300005530 Bacteria 1013
32 Ga0070695_100001849 3300005545 Bacteria 11944
33 Ga0070695_100356295 3300005545 Bacteria 1097
34 Ga0070696_100010093 3300005546 Bacteria 6320
35 Ga0070696_100129222 3300005546 Unclassified 1837
36 Ga0070693_100013121 3300005547 Bacteria 4213
37 Ga0070704_100708885 3300005549 Unclassified 893
38 Ga0070664_100031884 3300005564 Bacteria 4407
39 Ga0068857_100001519 3300005577 Bacteria 18526
40 Ga0068854_100002110 3300005578 Bacteria 12188
41 Ga0068856_100091177 3300005614 Unclassified 3032
42 Ga0068859_100015768 3300005617 Bacteria 7593
43 Ga0068859_100134363 3300005617 Bacteria 2545
44 Ga0068859_100229254 3300005617 Bacteria 1945
45 Ga0068864_100002344 3300005618 Bacteria 15662
46 Ga0068864_100077743 3300005618 Bacteria 2903
47 Ga0068866_10000191 3300005718 Bacteria 28693
48 Ga0068861_100039112 3300005719 Bacteria 3538
49 Ga0068858_100065288 3300005842 Unclassified 3367
50 Ga0068858_100221710 3300005842 Bacteria 1791
51 Ga0068860_100001544 3300005843 Bacteria 24792
52 Ga0081455_10000767 3300005937 Bacteria 41642
53 Ga0081538_10003981 3300005981 Bacteria 13762
54 Ga0081538_10012082 3300005981 Bacteria 6947
55 Ga0081540_1069342 3300005983 Bacteria 1639
56 Ga0081539_10016495 3300005985 Bacteria 5268
57 Ga0070716_100331481 3300006173 Bacteria 1070
58 Ga0070712_100044329 3300006175 Bacteria 3067
59 Ga0075428_100035253 3300006844 Bacteria 5516
60 Ga0075428_100081602 3300006844 Bacteria 3529
61 Ga0075428_100253162 3300006844 Bacteria 1897
62 Ga0075428_100394723 3300006844 Bacteria 1483
63 Ga0075431_100038304 3300006847 Bacteria 4936
64 Ga0075434_100036619 3300006871 Bacteria 4854
65 Ga0075434_100156883 3300006871 Bacteria 2295
66 Ga0075429_100077708 3300006880 Bacteria 2892
67 Ga0075429_100345058 3300006880 Bacteria 1303
68 Ga0068865_100005025 3300006881 Bacteria 8000
69 Ga0075436_100056727 3300006914 Bacteria 2705
70 Ga0075436_100351205 3300006914 Bacteria 1063
71 Ga0097620_100015771 3300006931 Bacteria 7593
72 Ga0097620_100134357 3300006931 Bacteria 2545
73 Ga0097620_100229260 3300006931 Bacteria 1945
74 Ga0075435_100143279 3300007076 Unclassified 2006
75 Ga0075435_100158912 3300007076 Bacteria 1903
76 Ga0075435_100312997 3300007076 Bacteria 1343
77 Ga0111539_10162207 3300009094 Bacteria 2614
78 Ga0111539_10332350 3300009094 Bacteria 1769
79 Ga0105245_10035284 3300009098 Bacteria 4438
80 Ga0114129_10000109 3300009147 Bacteria 81939
81 Ga0114129_10128159 3300009147 Bacteria 3488
82 Ga0114129_10160680 3300009147 Bacteria 3069
83 Ga0105242_10000288 3300009176 Bacteria 40129
84 Ga0105248_10001971 3300009177 Bacteria 22813
85 Ga0105238_10289688 3300009551 Unclassified 1619
86 Ga0105249_10044904 3300009553 Unclassified 4018
87 Ga0105249_10057199 3300009553 Bacteria 3572
88 Ga0105249_10104799 3300009553 Unclassified 2665
89 Ga0105249_10561236 3300009553 Bacteria 1193
90 Ga0105249_10561245 3300009553 Bacteria 1193
91 Ga0105239_10788723 3300010375 Bacteria 1088
92 Ga0105246_10287105 3300011119 Bacteria 1322
93 Ga0157371_10305176 3300013102 Unclassified 1153
94 Ga0157378_10006364 3300013297 Bacteria 10330
95 Ga0163162_10162991 3300013306 Bacteria 2352
96 Ga0157375_10543949 3300013308 Bacteria 1323
97 Ga0157375_10590851 3300013308 Bacteria 1270
98 Ga0157379_10825715 3300014968 Bacteria 876
99 Ga0163161_10021098 3300017792 Bacteria 4578
100 Ga0207682_10125992 3300025893 Unclassified 1140
101 Ga0207645_10001444 3300025907 Bacteria 19469
102 Ga0207643_10001464 3300025908 Bacteria 13546
103 Ga0207684_10506130 3300025910 Unclassified 1035
104 Ga0207684_10860417 3300025910 Bacteria 764
105 Ga0207646_10135892 3300025922 Bacteria 2214
106 Ga0207659_10102581 3300025926 Unclassified 2160
107 Ga0207659_10141070 3300025926 Unclassified 1871
108 Ga0207706_10000154 3300025933 Bacteria 75674
109 Ga0207686_10000088 3300025934 Bacteria 76743
110 Ga0207709_10009058 3300025935 Bacteria 5489
111 Ga0207704_10180078 3300025938 Unclassified 1526
112 Ga0207691_10107284 3300025940 Bacteria 2486
113 Ga0207711_10009831 3300025941 Bacteria 7955
114 Ga0207689_10001413 3300025942 Bacteria 22922
115 Ga0207661_10176460 3300025944 Bacteria 1863
116 Ga0207712_10008853 3300025961 Bacteria 6364
117 Ga0207712_10339793 3300025961 Bacteria 1245
118 Ga0207712_10670618 3300025961 Bacteria 903
119 Ga0207640_10002925 3300025981 Bacteria 9176
120 Ga0207678_10084771 3300026067 Unclassified 2710
121 Ga0207708_10017748 3300026075 Bacteria 5357
122 Ga0207708_10172783 3300026075 Bacteria 1712
123 Ga0207648_10000096 3300026089 Bacteria 83916
124 Ga0207648_10620306 3300026089 Bacteria 998
125 Ga0207676_10013293 3300026095 Bacteria 5913
126 Ga0207676_10023179 3300026095 Bacteria 4575
127 Ga0207674_10016737 3300026116 Bacteria 8013
128 Ga0207675_100024896 3300026118 Bacteria 5569
129 Ga0207675_100340721 3300026118 Bacteria 1468
130 Ga0207683_10046059 3300026121 Unclassified 3815
131 Ga0209974_10025697 3300027876 Unclassified 1949
132 Ga0207428_10077751 3300027907 Bacteria 2598
133 Ga0268265_10028747 3300028380 Bacteria 3984
134 Ga0268264_10259365 3300028381 Bacteria 1618
135 Ga0307408_100001447 3300031548 Bacteria 17658
136 Ga0307408_100003791 3300031548 Bacteria 10297
137 Ga0307408_100324301 3300031548 Bacteria 1298
138 Ga0307408_100430911 3300031548 Unclassified 1139
139 Ga0307405_10079886 3300031731 Bacteria 2133
140 Ga0307405_10366079 3300031731 Bacteria 1117
141 Ga0307413_10014655 3300031824 Bacteria 3991
142 Ga0307413_10028687 3300031824 Bacteria 3104
143 Ga0307413_10216081 3300031824 Bacteria 1396
144 Ga0307410_10035131 3300031852 Bacteria 3252
145 Ga0307410_10064815 3300031852 Bacteria 2511
146 Ga0307410_10075335 3300031852 Unclassified 2352
147 Ga0307410_10172147 3300031852 Unclassified 1632
148 Ga0307406_10006901 3300031901 Bacteria 6289
149 Ga0307406_10009832 3300031901 Bacteria 5382
150 Ga0307406_10254243 3300031901 Unclassified 1325
151 Ga0307407_10012552 3300031903 Bacteria 4077
152 Ga0307412_10155668 3300031911 Bacteria 1691
153 Ga0307412_10206941 3300031911 Bacteria 1494
154 Ga0307409_100000643 3300031995 Bacteria 15439
155 Ga0307409_100015285 3300031995 Bacteria 5031
156 Ga0307409_100015646 3300031995 Bacteria 4986
157 Ga0307409_100401339 3300031995 Bacteria 1309
158 Ga0307409_101127113 3300031995 Bacteria 806
159 Ga0307416_100000982 3300032002 Bacteria 15092
160 Ga0307416_100002898 3300032002 Bacteria 9994
161 Ga0307416_100041175 3300032002 Bacteria 3595
162 Ga0307416_100116257 3300032002 Bacteria 2371
163 Ga0307416_100120168 3300032002 Unclassified 2339
164 Ga0307416_100352557 3300032002 Bacteria 1490
165 Ga0307416_100534015 3300032002 Bacteria 1243
166 Ga0307414_10014890 3300032004 Bacteria 4680
167 Ga0307414_10239579 3300032004 Bacteria 1501
168 Ga0307414_10427664 3300032004 Bacteria 1156
169 Ga0307411_10015458 3300032005 Bacteria 4287
170 Ga0307411_10035655 3300032005 Bacteria 3109
171 Ga0307411_10248037 3300032005 Unclassified 1398
172 Ga0307415_100000279 3300032126 Bacteria 22082
173 Ga0307415_100012048 3300032126 Bacteria 4983
174 Ga0307415_100066453 3300032126 Bacteria 2516
175 Ga0307415_100203306 3300032126 Bacteria 1574
176 Ga0307415_100978968 3300032126 Bacteria 785
177 Ga0373940_0006393 3300035088 Bacteria 2613
178 Ga0373940_0008401 3300035088 Bacteria 2367
179 Ga0373949_0041589 3300035090 Unclassified 1132
180 Ga0373931_0078655 3300035691 Bacteria 1815
181 Ga0395905_0998424 3300037471 Bacteria 740
182 Ga0242420_004319 3300038996 Bacteria 2143
183 Ga0451849_1144414 3300041505 Bacteria 2216
184 Ga0451853_2572770 3300041512 Bacteria 1273
185 Ga0439433_0061744 3300041999 Bacteria 894
186 Ga0439448_0088498 3300042005 Bacteria 1045
187 Ga0439463_031639 3300042016 Bacteria 1336
188 Ga0450923_004389 3300042125 Unclassified 2215
189 Ga0439444_0006332 3300042437 Bacteria 1786
190 Ga0451577_0048099 3300042876 Bacteria 3812
191 Ga0451576_0172930 3300045051 Bacteria 2254
192 Ga0495603_0153930 3300046455 Bacteria 1335
193 Ga0495582_0008718 3300046473 Bacteria 5592
194 Ga0495662_0059788 3300046476 Unclassified 1840
195 Ga0495594_0000624 3300046499 Bacteria 18228
196 Ga0495594_0096648 3300046499 Bacteria 1660
197 Ga0495608_0384430 3300046511 Bacteria 860
198 Ga0495628_0218400 3300046516 Unclassified 1432
199 Ga0495630_0033311 3300046517 Unclassified 3841
200 Ga0495666_0000517 3300046526 Bacteria 17157
201 Ga0495665_0161165 3300046531 Unclassified 1169
202 Ga0495640_0003911 3300046533 Bacteria 11930
203 Ga0495586_0040935 3300046535 Bacteria 2494
204 Ga0495622_0089790 3300046557 Unclassified 1412
205 Ga0495667_0122484 3300046559 Bacteria 1679
206 Ga0495634_0141924 3300046642 Unclassified 1524
207 Ga0495647_0001854 3300046681 Bacteria 6553
208 Ga0495658_0004094 3300046683 Bacteria 7181
209 Ga0495613_0023059 3300046689 Bacteria 4639
210 Ga0495624_0014959 3300046690 Bacteria 5255
211 Ga0495600_0287655 3300046809 Bacteria 1039
212 Ga0495674_0014122 3300047319 Bacteria 7481
213 Ga0495680_0000557 3300047322 Bacteria 42073
214 Ga0495684_0031381 3300047471 Bacteria 4079
215 Ga0496101_0204348 3300048904 Unclassified 1528
216 Ga0496101_0454163 3300048904 Bacteria 1011
217 Ga0496102_0058339 3300048905 Unclassified 3526
218 Ga0496102_0185427 3300048905 Bacteria 1961
219 Ga0496102_0643162 3300048905 Bacteria 984
220 Ga0496103_0063307 3300048906 Bacteria 2304
221 Ga0496103_0085812 3300048906 Bacteria 1984
222 Ga0496104_0065305 3300048907 Bacteria 3453
223 Ga0496106_0015472 3300048909 Bacteria 5647
224 Ga0496106_0095614 3300048909 Bacteria 2298
225 Ga0496106_0111240 3300048909 Bacteria 2133
226 Ga0496106_0315478 3300048909 Unclassified 1255
227 Ga0496108_0001449 3300048911 Bacteria 18736
228 Ga0496108_0112118 3300048911 Unclassified 2333
229 Ga0496109_0053449 3300048912 Bacteria 3683
230 Ga0496109_0369179 3300048912 Bacteria 1355
231 Ga0496110_0039856 3300048913 Bacteria 4092
232 Ga0496110_0120124 3300048913 Bacteria 2367
233 Ga0496111_0006923 3300048914 Bacteria 7400
234 Ga0496111_0025537 3300048914 Bacteria 4169
235 Ga0496112_0002378 3300048915 Bacteria 15127
236 Ga0496112_0020813 3300048915 Bacteria 6226
237 Ga0496113_0005178 3300048916 Bacteria 8110
238 Ga0501299_021848 3300049522 Bacteria 1177
239 Ga0501034_0013552 3300049571 Bacteria 8391
240 Ga0501039_0107650 3300049575 Bacteria 2178
241 Ga0501040_0013709 3300049576 Bacteria 5332
242 Ga0501040_0179525 3300049576 Bacteria 1501
243 Ga0501040_0376966 3300049576 Unclassified 1018
244 Ga0501042_0020789 3300049578 Bacteria 4570
245 Ga0501048_0461637 3300049582 Bacteria 910
246 Ga0501067_0000738 3300049583 Bacteria 17581
247 Ga0501068_0002800 3300049584 Bacteria 9278
248 Ga0501069_0003595 3300049585 Bacteria 7987
249 Ga0501069_0321404 3300049585 Bacteria 909
250 Ga0501070_0029389 3300049586 Bacteria 4609
251 Ga0501070_0308398 3300049586 Unclassified 1288
252 Ga0501071_0000537 3300049587 Bacteria 19439
253 Ga0501071_0302980 3300049587 Bacteria 1212
254 Ga0501072_0003956 3300049588 Bacteria 11210
255 Ga0501072_0069552 3300049588 Bacteria 2780
256 Ga0501072_0075159 3300049588 Bacteria 2672
257 Ga0501072_0258406 3300049588 Unclassified 1387
258 Ga0501072_0301690 3300049588 Bacteria 1273
259 Ga0501073_0010561 3300049589 Bacteria 6762
260 Ga0501074_0026505 3300049590 Bacteria 4202
261 Ga0501075_0029114 3300049591 Bacteria 4083
262 Ga0501075_0031317 3300049591 Bacteria 3947
263 Ga0501075_0086213 3300049591 Bacteria 2379
264 Ga0501075_0296663 3300049591 Unclassified 1231
265 Ga0501076_0224723 3300049592 Bacteria 1534
266 Ga0501077_0000337 3300049593 Bacteria 27630
267 Ga0501077_0078827 3300049593 Bacteria 2087
268 Ga0501216_056001 3300049660 Bacteria 785
269 Ga0501217_005922 3300049661 Bacteria 2575
270 Ga0501233_129623 3300049668 Bacteria 688
271 Ga0501239_002379 3300049672 Bacteria 1702
272 Ga0501249_005063 3300049679 Unclassified 2693
273 Ga0501079_0010027 3300049741 Bacteria 7192
274 Ga0501080_0428483 3300049742 Unclassified 1187
275 Ga0501081_0016893 3300049743 Bacteria 4823
276 Ga0501081_0321242 3300049743 Bacteria 1138
277 Ga0501083_0006964 3300049744 Bacteria 8019
278 Ga0501083_0414702 3300049744 Bacteria 876
279 Ga0501035_0449584 3300049822 Unclassified 1066
280 Ga0501045_0047837 3300049824 Unclassified 3116
281 Ga0501212_024094 3300049851 Bacteria 957
282 nmdc:mga05p37_1000147_c1 3300050507 Unclassified 888
283 nmdc:mga05p37_581_c1 3300050507 Bacteria 40207
284 nmdc:mga05p37_647691_c1 3300050507 Bacteria 1184
285 nmdc:mga05p37_80719_c1 3300050507 Bacteria 4006
286 nmdc:mga05p37_9405_c1 3300050507 Bacteria 11569
287 nmdc:mga09592_142669_c1 3300050508 Unclassified 2065
288 nmdc:mga09592_39852_c1 3300050508 Bacteria 3946
289 nmdc:mga0qj67_227177_c1 3300050509 Bacteria 1515
290 nmdc:mga0qj67_789466_c1 3300050509 Unclassified 752
291 nmdc:mga06r32_179271_c1 3300050510 Bacteria 2104
292 nmdc:mga08y16_107960_c1 3300050511 Bacteria 2897
293 nmdc:mga08y16_737356_c1 3300050511 Bacteria 982
294 nmdc:mga0n895_22221_c1 3300050512 Bacteria 5947
295 nmdc:mga0n895_347774_c1 3300050512 Bacteria 1501
296 nmdc:mga0n895_48264_c1 3300050512 Bacteria 4166
297 nmdc:mga0rr50_31424_c1 3300050513 Bacteria 3770
298 nmdc:mga0rr50_418000_c1 3300050513 Bacteria 1134
299 nmdc:mga08x19_194118_c1 3300050514 Bacteria 1390
300 nmdc:mga0a205_241069_c1 3300050515 Bacteria 1689
301 nmdc:mga0a205_510078_c1 3300050515 Unclassified 1059
302 Ga0501084_0007097 3300054114 Bacteria 9231
303 Ga0501084_0033514 3300054114 Bacteria 4297
304 Ga0501084_0072375 3300054114 Bacteria 2887
305 Ga0501084_0300760 3300054114 Unclassified 1355
306 Ga0501084_0488728 3300054114 Bacteria 1040
307 Ga0501082_0004455 3300060353 Bacteria 12227
308 Ga0501082_0018928 3300060353 Bacteria 5933
309 Ga0501082_0539620 3300060353 Bacteria 1020
310 Ga0530510_0019206 3300061734 Unclassified 4849
311 Ga0530510_0144362 3300061734 Bacteria 1755
312 Ga0207639_10426906
313 JGI25405J52794_10006410
314 Ga0058859_11381097
315 Ga0070676_10001218
316 Ga0070683_100100008
317 Ga0068869_100020939
318 Ga0068869_100142229
319 Ga0070660_100203546
320 Ga0070668_100512665
321 Ga0070675_100090962
322 Ga0070674_100000059
323 Ga0070673_100116371
324 Ga0070667_100107490
325 Ga0070701_10203274
326 Ga0070711_100000200
327 Ga0070711_100061585
328 Ga0070705_100003424
329 Ga0070705_100177953
330 Ga0070694_100071721
331 Ga0070694_100224469
332 Ga0070708_100423748
333 Ga0070678_100001819
334 Ga0070662_100001077
335 Ga0070662_100197242
336 Ga0068867_100044338
337 Ga0070706_100518056
338 Ga0070707_100167427
339 Ga0070698_100003683
340 Ga0070699_100001155
341 Ga0070699_100455728
342 Ga0070679_100632049
343 Ga0070695_100001849
344 Ga0070695_100356295
345 Ga0070696_100010093
346 Ga0070696_100129222
347 Ga0070693_100013121
348 Ga0070704_100708885
349 Ga0070664_100031884
350 Ga0068857_100001519
351 Ga0068854_100002110
352 Ga0068856_100091177
353 Ga0068859_100015768
354 Ga0068859_100134363
355 Ga0068859_100229254
356 Ga0068864_100002344
357 Ga0068864_100077743
358 Ga0068866_10000191
359 Ga0068861_100039112
360 Ga0068858_100065288
361 Ga0068858_100221710
362 Ga0068860_100001544
363 Ga0081455_10000767
364 Ga0081538_10003981
365 Ga0081538_10012082
366 Ga0081540_1069342
367 Ga0081539_10016495
368 Ga0070716_100331481
369 Ga0070712_100044329
370 Ga0075428_100035253
371 Ga0075428_100081602
372 Ga0075428_100253162
373 Ga0075428_100394723
374 Ga0075431_100038304
375 Ga0075434_100036619
376 Ga0075434_100156883
377 Ga0075429_100077708
378 Ga0075429_100345058
379 Ga0068865_100005025
380 Ga0075436_100056727
381 Ga0075436_100351205
382 Ga0097620_100015771
383 Ga0097620_100134357
384 Ga0097620_100229260
385 Ga0075435_100143279
386 Ga0075435_100158912
387 Ga0075435_100312997
388 Ga0111539_10162207
389 Ga0111539_10332350
390 Ga0105245_10035284
391 Ga0114129_10000109
392 Ga0114129_10128159
393 Ga0114129_10160680
394 Ga0105242_10000288
395 Ga0105248_10001971
396 Ga0105238_10289688
397 Ga0105249_10044904
398 Ga0105249_10057199
399 Ga0105249_10104799
400 Ga0105249_10561236
401 Ga0105249_10561245
402 Ga0105239_10788723
403 Ga0105246_10287105
404 Ga0157371_10305176
405 Ga0157378_10006364
406 Ga0163162_10162991
407 Ga0157375_10543949
408 Ga0157375_10590851
409 Ga0157379_10825715
410 Ga0163161_10021098
411 Ga0207682_10125992
412 Ga0207645_10001444
413 Ga0207643_10001464
414 Ga0207684_10506130
415 Ga0207684_10860417
416 Ga0207646_10135892
417 Ga0207659_10102581
418 Ga0207659_10141070
419 Ga0207706_10000154
420 Ga0207686_10000088
421 Ga0207709_10009058
422 Ga0207704_10180078
423 Ga0207691_10107284
424 Ga0207711_10009831
425 Ga0207689_10001413
426 Ga0207661_10176460
427 Ga0207712_10008853
428 Ga0207712_10339793
429 Ga0207712_10670618
430 Ga0207640_10002925
431 Ga0207678_10084771
432 Ga0207708_10017748
433 Ga0207708_10172783
434 Ga0207648_10000096
435 Ga0207648_10620306
436 Ga0207676_10013293
437 Ga0207676_10023179
438 Ga0207674_10016737
439 Ga0207675_100024896
440 Ga0207675_100340721
441 Ga0207683_10046059
442 Ga0209974_10025697
443 Ga0207428_10077751
444 Ga0268265_10028747
445 Ga0268264_10259365
446 Ga0307408_100001447
447 Ga0307408_100003791
448 Ga0307408_100324301
449 Ga0307408_100430911
450 Ga0307405_10079886
451 Ga0307405_10366079
452 Ga0307413_10014655
453 Ga0307413_10028687
454 Ga0307413_10216081
455 Ga0307410_10035131
456 Ga0307410_10064815
457 Ga0307410_10075335
458 Ga0307410_10172147
459 Ga0307406_10006901
460 Ga0307406_10009832
461 Ga0307406_10254243
462 Ga0307407_10012552
463 Ga0307412_10155668
464 Ga0307412_10206941
465 Ga0307409_100000643
466 Ga0307409_100015285
467 Ga0307409_100015646
468 Ga0307409_100401339
469 Ga0307409_101127113
470 Ga0307416_100000982
471 Ga0307416_100002898
472 Ga0307416_100041175
473 Ga0307416_100116257
474 Ga0307416_100120168
475 Ga0307416_100352557
476 Ga0307416_100534015
477 Ga0307414_10014890
478 Ga0307414_10239579
479 Ga0307414_10427664
480 Ga0307411_10015458
481 Ga0307411_10035655
482 Ga0307411_10248037
483 Ga0307415_100000279
484 Ga0307415_100012048
485 Ga0307415_100066453
486 Ga0307415_100203306
487 Ga0307415_100978968
488 Ga0373940_0006393
489 Ga0373940_0008401
490 Ga0373949_0041589
491 Ga0373931_0078655
492 Ga0395905_0998424
493 Ga0242420_004319
494 Ga0451849_1144414
495 Ga0451853_2572770
496 Ga0439433_0061744
497 Ga0439448_0088498
498 Ga0439463_031639
499 Ga0450923_004389
500 Ga0439444_0006332
501 Ga0451577_0048099
502 Ga0451576_0172930
503 Ga0495603_0153930
504 Ga0495582_0008718
505 Ga0495662_0059788
506 Ga0495594_0000624
507 Ga0495594_0096648
508 Ga0495608_0384430
509 Ga0495628_0218400
510 Ga0495630_0033311
511 Ga0495666_0000517
512 Ga0495665_0161165
513 Ga0495640_0003911
514 Ga0495586_0040935
515 Ga0495622_0089790
516 Ga0495667_0122484
517 Ga0495634_0141924
518 Ga0495647_0001854
519 Ga0495658_0004094
520 Ga0495613_0023059
521 Ga0495624_0014959
522 Ga0495600_0287655
523 Ga0495674_0014122
524 Ga0495680_0000557
525 Ga0495684_0031381
526 Ga0496101_0204348
527 Ga0496101_0454163
528 Ga0496102_0058339
529 Ga0496102_0185427
530 Ga0496102_0643162
531 Ga0496103_0063307
532 Ga0496103_0085812
533 Ga0496104_0065305
534 Ga0496106_0015472
535 Ga0496106_0095614
536 Ga0496106_0111240
537 Ga0496106_0315478
538 Ga0496108_0001449
539 Ga0496108_0112118
540 Ga0496109_0053449
541 Ga0496109_0369179
542 Ga0496110_0039856
543 Ga0496110_0120124
544 Ga0496111_0006923
545 Ga0496111_0025537
546 Ga0496112_0002378
547 Ga0496112_0020813
548 Ga0496113_0005178
549 Ga0501299_021848
550 Ga0501034_0013552
551 Ga0501039_0107650
552 Ga0501040_0013709
553 Ga0501040_0179525
554 Ga0501040_0376966
555 Ga0501042_0020789
556 Ga0501048_0461637
557 Ga0501067_0000738
558 Ga0501068_0002800
559 Ga0501069_0003595
560 Ga0501069_0321404
561 Ga0501070_0029389
562 Ga0501070_0308398
563 Ga0501071_0000537
564 Ga0501071_0302980
565 Ga0501072_0003956
566 Ga0501072_0069552
567 Ga0501072_0075159
568 Ga0501072_0258406
569 Ga0501072_0301690
570 Ga0501073_0010561
571 Ga0501074_0026505
572 Ga0501075_0029114
573 Ga0501075_0031317
574 Ga0501075_0086213
575 Ga0501075_0296663
576 Ga0501076_0224723
577 Ga0501077_0000337
578 Ga0501077_0078827
579 Ga0501216_056001
580 Ga0501217_005922
581 Ga0501233_129623
582 Ga0501239_002379
583 Ga0501249_005063
584 Ga0501079_0010027
585 Ga0501080_0428483
586 Ga0501081_0016893
587 Ga0501081_0321242
588 Ga0501083_0006964
589 Ga0501083_0414702
590 Ga0501035_0449584
591 Ga0501045_0047837
592 Ga0501212_024094
593 nmdc:mga05p37_1000147_c1
594 nmdc:mga05p37_581_c1
595 nmdc:mga05p37_647691_c1
596 nmdc:mga05p37_80719_c1
597 nmdc:mga05p37_9405_c1
598 nmdc:mga09592_142669_c1
599 nmdc:mga09592_39852_c1
600 nmdc:mga0qj67_227177_c1
601 nmdc:mga0qj67_789466_c1
602 nmdc:mga06r32_179271_c1
603 nmdc:mga08y16_107960_c1
604 nmdc:mga08y16_737356_c1
605 nmdc:mga0n895_22221_c1
606 nmdc:mga0n895_347774_c1
607 nmdc:mga0n895_48264_c1
608 nmdc:mga0rr50_31424_c1
609 nmdc:mga0rr50_418000_c1
610 nmdc:mga08x19_194118_c1
611 nmdc:mga0a205_241069_c1
612 nmdc:mga0a205_510078_c1
613 Ga0501084_0007097
614 Ga0501084_0033514
615 Ga0501084_0072375
616 Ga0501084_0300760
617 Ga0501084_0488728
618 Ga0501082_0004455
619 Ga0501082_0018928
620 Ga0501082_0539620
621 Ga0530510_0019206
622 Ga0530510_0144362

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01168

Ala_racemase_N

Alanine racemase, N-terminal domain

49

266

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3r79-assembly3.cif.gz_B crystal structure of an uncharactertized protein from agrobacterium tumefaciens 0.9499 15 239
3r79-assembly3.cif.gz_A-2 crystal structure of an uncharactertized protein from agrobacterium tumefaciens 0.9333 14 240
6kzw-assembly2.cif.gz_B crystal structure of yggs family pyridoxal phosphate-dependent enzyme pipy from fusobacterium nucleatum 0.924 15 237
7f8e-assembly3.cif.gz_C crystal structure of yggs from fusobacterium nucleatum 0.9206 15 237
3cpg-assembly1.cif.gz_A crystal structure of an unknown protein from bifidobacterium adolescentis 0.9203 1 237
ID Description Score Start End Superfamily
af_Q2FZ87_1_222_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9359 16 241 3.20.20.10
3r79B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9321 15 239 3.20.20.10
af_Q2FZ87_1_222_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9278 16 241 3.20.20.10
5nm8B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9121 15 238 3.20.20.10
1w8gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.912 15 239 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A2E6XNF9-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9849 15 240 GO:0030170
AF-A0A1F7RCN0-F1-model_v4 YggS family pyridoxal phosphate enzyme 0.9793 15 221 GO:0030170
AF-A0A495YYJ7-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9788 15 242 GO:0030170
AF-A0A1Q7N2K8-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9786 14 241 GO:0030170
AF-A0A2V5SUX8-F1-model_v4 YggS family pyridoxal phosphate-dependent enzyme 0.9784 16 171 GO:0030170

Map