F400931

General Info

Members Datasets Scaffolds Average Seq Length
310 205 620 225

Family's Representative Sequence

Representative Sequence 3300049744|Ga0501083_0145190|Ga0501083_0145190_431_1189
Length 252
Sequence VTHGDAQTAAREIAAPAARLHRTMSFIHWLFDAQLHMGSQTVLWREVIGNLFGLASALGGMRRKVWAWPVGIVGNALLFTVFLGAVFGTPNPVNLLGQAGRQIMFIVVSIYGWARWAQRSRAAAAGESGAAIAPRWASWPVRLGLVAGLIGGTAVLTPLFRALGSYEPVWSDAWIFVGSLLATYGMAKGWVEFWLIWVAVDVVGVPLLFSAHYYASAAMYVFYGVFTLTGFFVWWRERARITRAAALAAAAA

Samples

Sample ID Description Type Environment
1 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
18 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
24 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
48 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
49 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
50 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
51 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
52 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
53 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
54 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
55 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
56 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
57 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
58 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
59 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
62 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
63 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
64 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
65 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
66 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
67 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
68 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
69 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
70 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
71 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
72 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
75 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
76 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
77 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
80 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
81 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
82 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
83 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
84 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
85 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
86 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
87 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
88 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
89 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
90 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
91 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
92 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
93 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
94 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
95 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
96 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
97 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
98 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
99 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
100 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
104 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
105 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
106 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
107 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
108 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
109 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
110 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
111 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
112 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
113 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
114 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
115 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
116 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
132 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
133 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
138 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
139 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
146 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
147 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
148 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
149 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
150 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
151 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
155 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
156 2643221549 Agromyces sp. Root1464 Isolate Unclassified
157 2643221613 Oerskovia sp. Root22 Isolate Unclassified
158 2643221619 Agromyces sp. Root81 Isolate Unclassified
159 2643221721 Oerskovia sp. Root918 Isolate Unclassified
160 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
161 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
162 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
163 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
164 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
165 2739367653 Kocuria sp. OV113 Isolate Unclassified
166 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
167 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
168 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
169 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
170 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
171 2808606394 Promicromonospora sp. C35 Isolate Unclassified
172 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
173 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
174 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
175 2857727296 Kocuria sp. R-72562 Isolate Unclassified
176 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
177 2858868258 Micromonospora sp. MH33 Isolate Unclassified
178 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
179 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
180 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
181 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
182 2902582711 Micromonospora sp. AP08 Isolate Unclassified
183 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
184 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
185 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
186 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
187 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
188 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
189 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
190 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
191 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
192 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
193 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
194 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
195 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
196 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
197 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
198 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
199 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
200 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
201 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
202 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
203 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
204 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
205 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.58
Metatranscriptomes 1.29
Isolates 16.13

Biome Distribution

Category Percentage (%)
Aerial Root 0.32
Bulb 0
Endosphere 3.23
Nodule 0
Rhizoplane 13.23
Rhizosphere 67.1
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501083_0145190 3300049744 Bacteria 1553
2 rootH1_10263560 3300003323 Bacteria 1586
3 Ga0065714_10010911 3300005288 Bacteria 2030
4 Ga0070676_10024942 3300005328 Bacteria 3374
5 Ga0070677_10030313 3300005333 Bacteria 2058
6 Ga0070666_10181426 3300005335 Bacteria 1477
7 Ga0070682_100350936 3300005337 Bacteria 1100
8 Ga0070669_100062378 3300005353 Bacteria 2740
9 Ga0070675_100011359 3300005354 Bacteria 6970
10 Ga0070675_100644166 3300005354 Bacteria 963
11 Ga0070674_100127333 3300005356 Bacteria 1894
12 Ga0070700_100532669 3300005441 Bacteria 909
13 Ga0070678_100023178 3300005456 Bacteria 4131
14 Ga0070672_100004248 3300005543 Bacteria 9366
15 Ga0070693_100219510 3300005547 Bacteria 1245
16 Ga0068856_100537755 3300005614 Bacteria 1190
17 Ga0068861_100594522 3300005719 Bacteria 1015
18 Ga0068870_10236535 3300005840 Bacteria 1125
19 Ga0075365_10293011 3300006038 Bacteria 1145
20 Ga0075367_10263594 3300006178 Bacteria 1082
21 Ga0105251_10014395 3300009011 Bacteria 4374
22 Ga0105243_10040239 3300009148 Bacteria 3648
23 Ga0105243_10058685 3300009148 Bacteria 3067
24 Ga0105243_10142822 3300009148 Bacteria 2044
25 Ga0105249_10314039 3300009553 Bacteria 1576
26 Ga0105246_10016874 3300011119 Bacteria 4632
27 Ga0105246_10166272 3300011119 Bacteria 1685
28 Ga0105246_10453452 3300011119 Bacteria 1078
29 Ga0157371_10107767 3300013102 Bacteria 1977
30 Ga0157371_10385230 3300013102 Bacteria 1024
31 Ga0157370_10005975 3300013104 Bacteria 13544
32 Ga0157369_10017320 3300013105 Bacteria 8099
33 Ga0157369_10045079 3300013105 Bacteria 4798
34 Ga0157369_10766523 3300013105 Bacteria 992
35 Ga0163162_10018502 3300013306 Bacteria 6826
36 Ga0157372_10207188 3300013307 Bacteria 2272
37 Ga0157372_10751667 3300013307 Bacteria 1134
38 Ga0157375_10020012 3300013308 Bacteria 6104
39 Ga0157375_11423533 3300013308 Bacteria 817
40 Ga0209051_1005645 3300025303 Bacteria 7245
41 Ga0207697_10009236 3300025315 Bacteria 4266
42 Ga0207713_1069999 3300025735 Bacteria 1298
43 Ga0207680_10038783 3300025903 Bacteria 2759
44 Ga0207645_10023480 3300025907 Bacteria 4008
45 Ga0207643_10040049 3300025908 Bacteria 2637
46 Ga0207659_10130691 3300025926 Bacteria 1937
47 Ga0207709_10001425 3300025935 Bacteria 16741
48 Ga0207709_10057964 3300025935 Bacteria 2404
49 Ga0207709_10080424 3300025935 Bacteria 2098
50 Ga0207709_10306091 3300025935 Bacteria 1184
51 Ga0207670_10658775 3300025936 Bacteria 864
52 Ga0207669_10115318 3300025937 Bacteria 1810
53 Ga0207691_10005961 3300025940 Bacteria 11770
54 Ga0207651_10096087 3300025960 Bacteria 2184
55 Ga0207712_10125046 3300025961 Bacteria 1951
56 Ga0207702_10518387 3300026078 Bacteria 1164
57 Ga0207676_10529827 3300026095 Bacteria 1123
58 Ga0207675_100091867 3300026118 Bacteria 2854
59 Ga0207683_10055607 3300026121 Bacteria 3470
60 Ga0316176_1108314 3300030732 Bacteria 1113
61 Ga0316179_1068983 3300030734 Bacteria 1617
62 Ga0316181_1042126 3300030744 Bacteria 1652
63 Ga0316182_1434484 3300030745 Bacteria 1117
64 Ga0307405_10102530 3300031731 Bacteria 1922
65 Ga0307405_10476868 3300031731 Bacteria 995
66 Ga0307413_10183126 3300031824 Bacteria 1496
67 Ga0307413_10736440 3300031824 Bacteria 823
68 Ga0307406_10373338 3300031901 Bacteria 1122
69 Ga0307412_10009501 3300031911 Bacteria 5583
70 Ga0307412_10198257 3300031911 Bacteria 1523
71 Ga0307409_100039765 3300031995 Bacteria 3494
72 Ga0307409_100634684 3300031995 Bacteria 1060
73 Ga0307416_100030570 3300032002 Bacteria 4043
74 Ga0307416_100359976 3300032002 Bacteria 1477
75 Ga0307414_10745532 3300032004 Bacteria 890
76 Ga0395899_0086268 3300037312 Bacteria 2280
77 Ga0395898_0020682 3300037466 Bacteria 6681
78 Ga0395898_0043213 3300037466 Bacteria 4441
79 Ga0395901_0004838 3300038443 Bacteria 13588
80 Ga0395901_0392629 3300038443 Bacteria 1426
81 Ga0439466_0063977 3300041411 Bacteria 1180
82 Ga0451791_0626464 3300041451 Bacteria 1479
83 Ga0451793_1024537 3300041452 Bacteria 1547
84 Ga0451806_390352 3300041462 Bacteria 954
85 Ga0451853_0545423 3300041512 Bacteria 6584
86 Ga0466969_0032945 3300044656 Bacteria 2633
87 Ga0466965_0018976 3300044683 Bacteria 3300
88 Ga0466961_0023079 3300044693 Bacteria 4000
89 Ga0466968_0068236 3300044735 Bacteria 1543
90 Ga0466970_0007987 3300044765 Bacteria 5314
91 Ga0466970_0023029 3300044765 Bacteria 3250
92 Ga0466970_0368425 3300044765 Bacteria 817
93 Ga0466960_0003039 3300044901 Bacteria 6408
94 Ga0466959_0015725 3300045049 Bacteria 5518
95 Ga0466967_0006279 3300045976 Bacteria 8383
96 Ga0495641_0084538 3300046461 Bacteria 1421
97 Ga0495639_0202089 3300046475 Bacteria 973
98 Ga0495608_0337491 3300046511 Bacteria 929
99 Ga0495628_0317660 3300046516 Bacteria 1150
100 Ga0495667_0134969 3300046559 Bacteria 1591
101 Ga0495656_0009424 3300046615 Bacteria 3510
102 Ga0495659_0023236 3300046664 Bacteria 2105
103 Ga0495588_0040704 3300046674 Bacteria 2371
104 Ga0495588_0060130 3300046674 Bacteria 1966
105 Ga0495670_0104511 3300046691 Bacteria 1461
106 Ga0495581_0114408 3300047315 Bacteria 1569
107 Ga0495636_0025338 3300047318 Bacteria 2408
108 Ga0495674_0589258 3300047319 Bacteria 882
109 Ga0495684_0425625 3300047471 Bacteria 927
110 Ga0495626_0017598 3300048091 Bacteria 3606
111 Ga0496100_0060192 3300048903 Bacteria 2498
112 Ga0496100_0071276 3300048903 Bacteria 2320
113 Ga0496100_0235031 3300048903 Bacteria 1350
114 Ga0496100_0316557 3300048903 Bacteria 1171
115 Ga0496101_0192015 3300048904 Bacteria 1576
116 Ga0496102_0002716 3300048905 Bacteria 15056
117 Ga0496102_0033842 3300048905 Bacteria 4594
118 Ga0496102_0326105 3300048905 Bacteria 1446
119 Ga0496102_0346700 3300048905 Bacteria 1398
120 Ga0496102_1236612 3300048905 Bacteria 666
121 Ga0496103_0019235 3300048906 Bacteria 4100
122 Ga0496103_0255966 3300048906 Bacteria 1126
123 Ga0496104_0460287 3300048907 Bacteria 1183
124 Ga0496105_0100495 3300048908 Bacteria 2388
125 Ga0496106_0017524 3300048909 Bacteria 5300
126 Ga0496106_0165185 3300048909 Bacteria 1752
127 Ga0496106_0193356 3300048909 Bacteria 1618
128 Ga0496107_0009113 3300048910 Bacteria 6881
129 Ga0496107_0070061 3300048910 Bacteria 2546
130 Ga0496107_0270531 3300048910 Bacteria 1264
131 Ga0496107_0274144 3300048910 Bacteria 1256
132 Ga0496107_0354592 3300048910 Bacteria 1091
133 Ga0496108_0076602 3300048911 Bacteria 2827
134 Ga0496108_0308835 3300048911 Bacteria 1378
135 Ga0496108_0474011 3300048911 Bacteria 1094
136 Ga0496109_0220710 3300048912 Bacteria 1782
137 Ga0496109_0461655 3300048912 Bacteria 1199
138 Ga0496109_0847396 3300048912 Bacteria 852
139 Ga0496110_0061027 3300048913 Bacteria 3326
140 Ga0496111_0016882 3300048914 Bacteria 5038
141 Ga0496113_0180064 3300048916 Bacteria 1675
142 Ga0496114_0008940 3300048917 Bacteria 7940
143 Ga0496114_0086692 3300048917 Bacteria 2654
144 Ga0496114_0137373 3300048917 Bacteria 2114
145 Ga0496114_0228521 3300048917 Bacteria 1634
146 Ga0496114_0233856 3300048917 Bacteria 1615
147 Ga0496114_0309757 3300048917 Bacteria 1394
148 Ga0496115_0118213 3300048918 Bacteria 2180
149 Ga0496117_0001996 3300048920 Bacteria 27057
150 Ga0496117_0122667 3300048920 Bacteria 1593
151 Ga0496118_0000290 3300048921 Bacteria 87438
152 Ga0496118_0187707 3300048921 Bacteria 1240
153 Ga0496119_0076257 3300048922 Bacteria 1945
154 Ga0496119_0096071 3300048922 Bacteria 1673
155 Ga0496119_0103456 3300048922 Bacteria 1595
156 Ga0496119_0132665 3300048922 Bacteria 1355
157 Ga0496120_0045356 3300048923 Bacteria 2547
158 Ga0496120_0196338 3300048923 Bacteria 980
159 Ga0496122_0000403 3300048925 Bacteria 91680
160 Ga0496122_0008173 3300048925 Bacteria 11377
161 Ga0496122_0129713 3300048925 Bacteria 1605
162 Ga0496123_0000510 3300048926 Bacteria 67563
163 Ga0496123_0026616 3300048926 Bacteria 4328
164 Ga0496123_0156543 3300048926 Bacteria 1221
165 Ga0496124_0000040 3300048927 Bacteria 307061
166 Ga0496124_0000205 3300048927 Bacteria 116897
167 Ga0496124_0029445 3300048927 Bacteria 4892
168 Ga0496124_0094826 3300048927 Bacteria 2426
169 Ga0496124_0213363 3300048927 Bacteria 1458
170 Ga0496125_0010212 3300048928 Bacteria 9518
171 Ga0496126_0335175 3300048929 Bacteria 1240
172 Ga0501306_018291 3300049127 Bacteria 957
173 Ga0501316_005921 3300049532 Bacteria 1285
174 Ga0501317_002713 3300049533 Bacteria 1697
175 Ga0501321_000728 3300049537 Bacteria 2292
176 Ga0501031_0006150 3300049568 Bacteria 7837
177 Ga0501031_0013319 3300049568 Bacteria 5367
178 Ga0501031_0552606 3300049568 Bacteria 741
179 Ga0501032_0024577 3300049569 Bacteria 4158
180 Ga0501032_0343122 3300049569 Bacteria 962
181 Ga0501033_0006613 3300049570 Bacteria 9066
182 Ga0501033_0012170 3300049570 Bacteria 6568
183 Ga0501033_0029859 3300049570 Bacteria 4098
184 Ga0501033_0093157 3300049570 Bacteria 2203
185 Ga0501033_0186624 3300049570 Bacteria 1485
186 Ga0501033_0385075 3300049570 Bacteria 979
187 Ga0501033_0483244 3300049570 Bacteria 858
188 Ga0501034_0009485 3300049571 Bacteria 10187
189 Ga0501034_0640937 3300049571 Bacteria 965
190 Ga0501036_0002967 3300049572 Bacteria 13477
191 Ga0501036_0011657 3300049572 Bacteria 7286
192 Ga0501036_0012573 3300049572 Bacteria 7020
193 Ga0501037_0021190 3300049573 Bacteria 4802
194 Ga0501037_0129121 3300049573 Bacteria 1813
195 Ga0501037_0313361 3300049573 Bacteria 1087
196 Ga0501037_0432313 3300049573 Bacteria 900
197 Ga0501038_0008097 3300049574 Bacteria 9672
198 Ga0501038_0011704 3300049574 Bacteria 8004
199 Ga0501039_0002521 3300049575 Bacteria 13656
200 Ga0501039_0028959 3300049575 Bacteria 4265
201 Ga0501039_0042612 3300049575 Bacteria 3506
202 Ga0501039_0282551 3300049575 Bacteria 1305
203 Ga0501040_0007158 3300049576 Bacteria 7226
204 Ga0501040_0076691 3300049576 Bacteria 2311
205 Ga0501041_0010924 3300049577 Bacteria 5359
206 Ga0501042_0001230 3300049578 Bacteria 14900
207 Ga0501042_0010186 3300049578 Bacteria 6292
208 Ga0501042_0116179 3300049578 Bacteria 1926
209 Ga0501043_0016830 3300049579 Bacteria 5731
210 Ga0501046_0014611 3300049580 Bacteria 6616
211 Ga0501046_0050750 3300049580 Bacteria 3276
212 Ga0501046_0133833 3300049580 Bacteria 1879
213 Ga0501047_0031782 3300049581 Bacteria 5092
214 Ga0501047_0183453 3300049581 Bacteria 1959
215 Ga0501047_0261571 3300049581 Bacteria 1578
216 Ga0501048_0006937 3300049582 Bacteria 8607
217 Ga0501048_0068523 3300049582 Bacteria 2506
218 Ga0501048_0074894 3300049582 Bacteria 2388
219 Ga0501067_0130635 3300049583 Bacteria 1398
220 Ga0501068_0078510 3300049584 Bacteria 2023
221 Ga0501069_0236401 3300049585 Bacteria 1064
222 Ga0501070_0228465 3300049586 Bacteria 1525
223 Ga0501071_0000355 3300049587 Bacteria 22415
224 Ga0501071_0010821 3300049587 Bacteria 6119
225 Ga0501074_0022047 3300049590 Bacteria 4627
226 Ga0501074_0088312 3300049590 Bacteria 2220
227 Ga0501075_0006222 3300049591 Bacteria 8207
228 Ga0501075_0009937 3300049591 Bacteria 6670
229 Ga0501075_0142971 3300049591 Bacteria 1824
230 Ga0501076_0000758 3300049592 Bacteria 20827
231 Ga0501076_0001672 3300049592 Bacteria 15001
232 Ga0501076_0189117 3300049592 Bacteria 1680
233 Ga0501077_0027831 3300049593 Bacteria 3590
234 Ga0501080_0276506 3300049742 Bacteria 1527
235 Ga0501080_0683296 3300049742 Bacteria 906
236 Ga0501081_0018730 3300049743 Bacteria 4599
237 Ga0501083_0000123 3300049744 Bacteria 52722
238 Ga0501083_0038707 3300049744 Bacteria 3241
239 Ga0501035_0017073 3300049822 Bacteria 6687
240 Ga0501035_0317550 3300049822 Bacteria 1309
241 Ga0501044_0015803 3300049823 Bacteria 8126
242 Ga0501045_0017998 3300049824 Bacteria 5017
243 Ga0501045_0029332 3300049824 Bacteria 3976
244 Ga0501045_0044163 3300049824 Bacteria 3246
245 Ga0501045_0129742 3300049824 Bacteria 1874
246 Ga0501045_0322139 3300049824 Bacteria 1150
247 nmdc:mga00v17_461801_c1 3300050491 Bacteria 824
248 Ga0495619_0108258 3300053085 Bacteria 1897
249 Ga0500650_0009416 3300053098 Bacteria 3918
250 Ga0500559_0161624 3300053136 Bacteria 1052
251 Ga0500559_0183679 3300053136 Bacteria 985
252 Ga0500568_0113232 3300053139 Bacteria 1013
253 Ga0500573_0207660 3300053140 Bacteria 1035
254 Ga0500577_0003048 3300053142 Bacteria 4324
255 Ga0501084_0005195 3300054114 Bacteria 10653
256 Ga0501084_0009366 3300054114 Bacteria 8103
257 Ga0501082_0058772 3300060353 Bacteria 3313
258 Ga0501082_0311739 3300060353 Bacteria 1370
259 Ga0466962_0117109 3300061719 Bacteria 1284
260 Ga0530510_0102741 3300061734 Bacteria 2090
261 2643769861 2643221549 Bacteria 4042819
262 2644081033 2643221613 Bacteria 4622396
263 2644114509 2643221619 Bacteria 4158469
264 2644663656 2643221721 Bacteria 4486924
265 2723641387 2721755702 Bacteria 4373124
266 2738695002 2738541272 Bacteria 6848551
267 2739204129 2738543005 Bacteria 5278128
268 2739238102 2738543011 Bacteria 5731169
269 2739327289 2738543027 Bacteria 6409078
270 2739602426 2739367653 Bacteria 2780952
271 2739608361 2739367654 Bacteria 6049412
272 2753302939 2751185788 Bacteria 4541048
273 2760305715 2758568522 Bacteria 5953541
274 2760625775 2758568621 Bacteria 5967089
275 2784472363 2784132109 Bacteria 3141763
276 2809030806 2808606394 Bacteria 6248540
277 2817509071 2816332305 Bacteria 2697803
278 2835190634 2835188231 Bacteria 3476928
279 2839987313 2839986021 Bacteria 3685650
280 2857729017 2857727296 Bacteria 2745552
281 2857733050 2857729791 Bacteria 4040535
282 2858875873 2858868258 Bacteria 7683772
283 2862995803 2862993130 Bacteria 3860849
284 2870622360 2870622029 Bacteria 3643329
285 2884995502 2884994152 Bacteria 4492978
286 2893684656 2893684298 Bacteria 2897960
287 2902586674 2902582711 Bacteria 6187705
288 2904431683 2904430863 Bacteria 3486923
289 2904504214 2904501621 Bacteria 3401437
290 2908676405 2908674828 Bacteria 3382763
291 2909076644 2909074476 Bacteria 3436050
292 2919039257 2919039151 Bacteria 3391018
293 2919042634 2919042368 Bacteria 3905917
294 2919446974 2919443155 Bacteria 4072969
295 2928104940 2928104781 Bacteria 3877447
296 2928121753 2928121344 Bacteria 3972376
297 2928145013 2928142448 Bacteria 5288925
298 2928503005 2928500415 Bacteria 3384541
299 2932432479 2932431166 Bacteria 4215299
300 2935410806 2935409751 Bacteria 4179611
301 2935893978 2935890801 Bacteria 4593001
302 2939658171 2939657138 Bacteria 3740283
303 2939663726 2939660829 Bacteria 3784848
304 2966923245 2966921586 Bacteria 3092803
305 2966925067 2966924647 Bacteria 3268643
306 2974303025 2974302888 Bacteria 4369871
307 2984555086 2984551494 Bacteria 3877562
308 8004024429 8004021418 Bacteria 4313954
309 8004026030 8004025490 Bacteria 4327753
310 8056584608 8056579771 Bacteria 5840325
311 Ga0501083_0145190
312 rootH1_10263560
313 Ga0065714_10010911
314 Ga0070676_10024942
315 Ga0070677_10030313
316 Ga0070666_10181426
317 Ga0070682_100350936
318 Ga0070669_100062378
319 Ga0070675_100011359
320 Ga0070675_100644166
321 Ga0070674_100127333
322 Ga0070700_100532669
323 Ga0070678_100023178
324 Ga0070672_100004248
325 Ga0070693_100219510
326 Ga0068856_100537755
327 Ga0068861_100594522
328 Ga0068870_10236535
329 Ga0075365_10293011
330 Ga0075367_10263594
331 Ga0105251_10014395
332 Ga0105243_10040239
333 Ga0105243_10058685
334 Ga0105243_10142822
335 Ga0105249_10314039
336 Ga0105246_10016874
337 Ga0105246_10166272
338 Ga0105246_10453452
339 Ga0157371_10107767
340 Ga0157371_10385230
341 Ga0157370_10005975
342 Ga0157369_10017320
343 Ga0157369_10045079
344 Ga0157369_10766523
345 Ga0163162_10018502
346 Ga0157372_10207188
347 Ga0157372_10751667
348 Ga0157375_10020012
349 Ga0157375_11423533
350 Ga0209051_1005645
351 Ga0207697_10009236
352 Ga0207713_1069999
353 Ga0207680_10038783
354 Ga0207645_10023480
355 Ga0207643_10040049
356 Ga0207659_10130691
357 Ga0207709_10001425
358 Ga0207709_10057964
359 Ga0207709_10080424
360 Ga0207709_10306091
361 Ga0207670_10658775
362 Ga0207669_10115318
363 Ga0207691_10005961
364 Ga0207651_10096087
365 Ga0207712_10125046
366 Ga0207702_10518387
367 Ga0207676_10529827
368 Ga0207675_100091867
369 Ga0207683_10055607
370 Ga0316176_1108314
371 Ga0316179_1068983
372 Ga0316181_1042126
373 Ga0316182_1434484
374 Ga0307405_10102530
375 Ga0307405_10476868
376 Ga0307413_10183126
377 Ga0307413_10736440
378 Ga0307406_10373338
379 Ga0307412_10009501
380 Ga0307412_10198257
381 Ga0307409_100039765
382 Ga0307409_100634684
383 Ga0307416_100030570
384 Ga0307416_100359976
385 Ga0307414_10745532
386 Ga0395899_0086268
387 Ga0395898_0020682
388 Ga0395898_0043213
389 Ga0395901_0004838
390 Ga0395901_0392629
391 Ga0439466_0063977
392 Ga0451791_0626464
393 Ga0451793_1024537
394 Ga0451806_390352
395 Ga0451853_0545423
396 Ga0466969_0032945
397 Ga0466965_0018976
398 Ga0466961_0023079
399 Ga0466968_0068236
400 Ga0466970_0007987
401 Ga0466970_0023029
402 Ga0466970_0368425
403 Ga0466960_0003039
404 Ga0466959_0015725
405 Ga0466967_0006279
406 Ga0495641_0084538
407 Ga0495639_0202089
408 Ga0495608_0337491
409 Ga0495628_0317660
410 Ga0495667_0134969
411 Ga0495656_0009424
412 Ga0495659_0023236
413 Ga0495588_0040704
414 Ga0495588_0060130
415 Ga0495670_0104511
416 Ga0495581_0114408
417 Ga0495636_0025338
418 Ga0495674_0589258
419 Ga0495684_0425625
420 Ga0495626_0017598
421 Ga0496100_0060192
422 Ga0496100_0071276
423 Ga0496100_0235031
424 Ga0496100_0316557
425 Ga0496101_0192015
426 Ga0496102_0002716
427 Ga0496102_0033842
428 Ga0496102_0326105
429 Ga0496102_0346700
430 Ga0496102_1236612
431 Ga0496103_0019235
432 Ga0496103_0255966
433 Ga0496104_0460287
434 Ga0496105_0100495
435 Ga0496106_0017524
436 Ga0496106_0165185
437 Ga0496106_0193356
438 Ga0496107_0009113
439 Ga0496107_0070061
440 Ga0496107_0270531
441 Ga0496107_0274144
442 Ga0496107_0354592
443 Ga0496108_0076602
444 Ga0496108_0308835
445 Ga0496108_0474011
446 Ga0496109_0220710
447 Ga0496109_0461655
448 Ga0496109_0847396
449 Ga0496110_0061027
450 Ga0496111_0016882
451 Ga0496113_0180064
452 Ga0496114_0008940
453 Ga0496114_0086692
454 Ga0496114_0137373
455 Ga0496114_0228521
456 Ga0496114_0233856
457 Ga0496114_0309757
458 Ga0496115_0118213
459 Ga0496117_0001996
460 Ga0496117_0122667
461 Ga0496118_0000290
462 Ga0496118_0187707
463 Ga0496119_0076257
464 Ga0496119_0096071
465 Ga0496119_0103456
466 Ga0496119_0132665
467 Ga0496120_0045356
468 Ga0496120_0196338
469 Ga0496122_0000403
470 Ga0496122_0008173
471 Ga0496122_0129713
472 Ga0496123_0000510
473 Ga0496123_0026616
474 Ga0496123_0156543
475 Ga0496124_0000040
476 Ga0496124_0000205
477 Ga0496124_0029445
478 Ga0496124_0094826
479 Ga0496124_0213363
480 Ga0496125_0010212
481 Ga0496126_0335175
482 Ga0501306_018291
483 Ga0501316_005921
484 Ga0501317_002713
485 Ga0501321_000728
486 Ga0501031_0006150
487 Ga0501031_0013319
488 Ga0501031_0552606
489 Ga0501032_0024577
490 Ga0501032_0343122
491 Ga0501033_0006613
492 Ga0501033_0012170
493 Ga0501033_0029859
494 Ga0501033_0093157
495 Ga0501033_0186624
496 Ga0501033_0385075
497 Ga0501033_0483244
498 Ga0501034_0009485
499 Ga0501034_0640937
500 Ga0501036_0002967
501 Ga0501036_0011657
502 Ga0501036_0012573
503 Ga0501037_0021190
504 Ga0501037_0129121
505 Ga0501037_0313361
506 Ga0501037_0432313
507 Ga0501038_0008097
508 Ga0501038_0011704
509 Ga0501039_0002521
510 Ga0501039_0028959
511 Ga0501039_0042612
512 Ga0501039_0282551
513 Ga0501040_0007158
514 Ga0501040_0076691
515 Ga0501041_0010924
516 Ga0501042_0001230
517 Ga0501042_0010186
518 Ga0501042_0116179
519 Ga0501043_0016830
520 Ga0501046_0014611
521 Ga0501046_0050750
522 Ga0501046_0133833
523 Ga0501047_0031782
524 Ga0501047_0183453
525 Ga0501047_0261571
526 Ga0501048_0006937
527 Ga0501048_0068523
528 Ga0501048_0074894
529 Ga0501067_0130635
530 Ga0501068_0078510
531 Ga0501069_0236401
532 Ga0501070_0228465
533 Ga0501071_0000355
534 Ga0501071_0010821
535 Ga0501074_0022047
536 Ga0501074_0088312
537 Ga0501075_0006222
538 Ga0501075_0009937
539 Ga0501075_0142971
540 Ga0501076_0000758
541 Ga0501076_0001672
542 Ga0501076_0189117
543 Ga0501077_0027831
544 Ga0501080_0276506
545 Ga0501080_0683296
546 Ga0501081_0018730
547 Ga0501083_0000123
548 Ga0501083_0038707
549 Ga0501035_0017073
550 Ga0501035_0317550
551 Ga0501044_0015803
552 Ga0501045_0017998
553 Ga0501045_0029332
554 Ga0501045_0044163
555 Ga0501045_0129742
556 Ga0501045_0322139
557 nmdc:mga00v17_461801_c1
558 Ga0495619_0108258
559 Ga0500650_0009416
560 Ga0500559_0161624
561 Ga0500559_0183679
562 Ga0500568_0113232
563 Ga0500573_0207660
564 Ga0500577_0003048
565 Ga0501084_0005195
566 Ga0501084_0009366
567 Ga0501082_0058772
568 Ga0501082_0311739
569 Ga0466962_0117109
570 Ga0530510_0102741
571 2643769861
572 2644081033
573 2644114509
574 2644663656
575 2723641387
576 2738695002
577 2739204129
578 2739238102
579 2739327289
580 2739602426
581 2739608361
582 2753302939
583 2760305715
584 2760625775
585 2784472363
586 2809030806
587 2817509071
588 2835190634
589 2839987313
590 2857729017
591 2857733050
592 2858875873
593 2862995803
594 2870622360
595 2884995502
596 2893684656
597 2902586674
598 2904431683
599 2904504214
600 2908676405
601 2909076644
602 2919039257
603 2919042634
604 2919446974
605 2928104940
606 2928121753
607 2928145013
608 2928503005
609 2932432479
610 2935410806
611 2935893978
612 2939658171
613 2939663726
614 2966923245
615 2966925067
616 2974303025
617 2984555086
618 8004024429
619 8004026030
620 8056584608

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04973

NMN_transporter

Nicotinamide mononucleotide transporter

43

236

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qtn-assembly1.cif.gz_B crystal structure of the vitamin b3 transporter pnuc 0.7465 21 208
2cpt-assembly1.cif.gz_A solution structure of mit domain from human skd1 0.6453 10 110
2w2u-assembly1.cif.gz_A structural insight into the interaction between archaeal escrt-iii and aaa-atpase 0.6426 22 94
4qtn-assembly1.cif.gz_B crystal structure of the vitamin b3 transporter pnuc 0.6236 21 208
2w2u-assembly1.cif.gz_A structural insight into the interaction between archaeal escrt-iii and aaa-atpase 0.5818 22 94
ID Description Score Start End Superfamily
2cptA01 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.745 15 99 1.20.58.80
2cptA01 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.7376 15 99 1.20.58.80
2w2uA00 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.6426 22 94 1.20.58.80
2v6yA00 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.6421 22 92 1.20.58.80
2w2uA00 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.5818 22 94 1.20.58.80
ID Description Score Start End GO Terms
AF-A0A4P6UDM4-F1-model_v4 Nicotinamide riboside transporter PnuC 0.9533 1 212 GO:0003735
GO:0005840
GO:0005886
GO:0006412
GO:0034257
AF-A0A160PQ56-F1-model_v4 Mononucleotide transporter 0.9419 1 211 GO:0005886
GO:0034257
AF-A0A7I8AQF7-F1-model_v4 deleted 0.9413 1 211
AF-A0A4R4ST86-F1-model_v4 Nicotinamide riboside transporter PnuC 0.9363 1 206 GO:0005886
GO:0034257
AF-A0A1S2WWC6-F1-model_v4 Nicotinamide riboside transporter PnuC 0.936 107 212 GO:0005886
GO:0034257

Map