F399792

General Info

Members Datasets Scaffolds Average Seq Length
308 235 616 325

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_1711054|Ga0436365_1711054_126_1316
Length 396
Sequence MDGRFTVQSARRASPFGLIRLQFAHLLRIPGHFGDVSPARVQRDESLGLICGAIAADRPALRRPPQRDYMFMMQHSSPQPLSGMQVPRFGEVATFMRLPVERDPTRLDIALIGVPWDGGTTNRPGARHGPREIRNMSTLMRRVHHVSLVAPYELCRVGDYGDAPVNPIDLQDSLRRIEQHFRVLHDAGTVPLAAGGDHLVTLPILRAIARERPVGVIHFDAHSDTNDSYFGGEKYTHGTPFRRAIEEGLIDPKRMIQIGIRGSIYSTDEKDWAEQAGIRIVHIEEYFRLGPDAVIAEARRIVGDGPVYISFDVDGLDPVYAPGTGTPEIGGYSTAEAQRMIRALEGLDLVGGDVVEVAPPFDPSGNTALVGATMMFELLCVIAPAVHRRKNRLRRL

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
23 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
24 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
25 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
37 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
40 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
41 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
42 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
43 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
44 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
46 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
48 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
70 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
72 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
73 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
78 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
79 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
83 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
84 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
85 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
86 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
87 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
88 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
91 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
92 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
93 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
94 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
100 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
101 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
102 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
103 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
104 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
105 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
106 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
107 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
108 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
112 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
113 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
114 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
115 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
116 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
117 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
118 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
123 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
124 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
125 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
126 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
127 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
128 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
129 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
130 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
131 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
132 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
133 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
134 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
135 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
136 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
137 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
141 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
142 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
143 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
154 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
155 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
156 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
157 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
158 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
162 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
176 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
177 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
178 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
179 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
180 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
181 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
182 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
183 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
184 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
185 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
186 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
189 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
190 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
191 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
192 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
193 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
194 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
195 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
196 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
197 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
198 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
199 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
200 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
201 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
202 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
203 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
204 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
205 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
206 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
207 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
208 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
209 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
210 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
211 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
212 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
213 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
214 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
215 2842805378 Pseudomonas sp. R-72599 Isolate Unclassified
216 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
217 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
218 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
219 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
220 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
221 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
222 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
223 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
224 2906354277 Mesorhizobium sp. M2A.F.Ca.ET.040.01.1.1 Isolate Nodule
225 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
226 2922130491 Mesorhizobium sp. M00.F.Ca.ET.038.03.1.1 Isolate Nodule
227 2922185730 Mesorhizobium sp. M2A.F.Ca.ET.037.01.1.1 Isolate Nodule
228 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
229 2977971508 Mesorhizobium sp. M2A.F.Ca.ET.039.01.1.1 Isolate Nodule
230 2979742915 Mesorhizobium sp. M2A.F.Ca.ET.046.02.1.1 Isolate Nodule
231 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified
232 646564506 Arcobacter nitrofigilis DSM 7299 Isolate Unclassified
233 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
234 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
235 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.96
Metatranscriptomes 0.32
Isolates 10.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.47
Nodule 1.95
Rhizoplane 4.22
Rhizosphere 75
Stem 0
Stem Tuber 0
Unclassified 0.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_1711054 3300039437 Bacteria 1557
2 JGI25163J39215_1000235 3300002771 Bacteria 20459
3 JGI25164J39214_1000077 3300002772 Bacteria 95293
4 JGI25165J46597_1000182 3300003214 Bacteria 95293
5 JGI25153J46596_10000145 3300003215 Bacteria 72113
6 JGI25153J46596_10000325 3300003215 Bacteria 34505
7 Ga0058692_1007122 3300003856 Bacteria 2997
8 Ga0065704_10083884 3300005289 Bacteria 3405
9 Ga0070713_100089503 3300005436 Bacteria 2644
10 Ga0070708_100183212 3300005445 Bacteria 1958
11 Ga0070681_10064491 3300005458 Bacteria 3633
12 Ga0070681_10185335 3300005458 Bacteria 2002
13 Ga0070706_100127656 3300005467 Bacteria 2372
14 Ga0070699_100054966 3300005518 Bacteria 3448
15 Ga0070679_100174341 3300005530 Bacteria 2123
16 Ga0070695_100057717 3300005545 Bacteria 2508
17 Ga0070693_100178900 3300005547 Bacteria 1364
18 Ga0068859_100086313 3300005617 Bacteria 3185
19 Ga0068862_100031355 3300005844 Bacteria 4486
20 Ga0081538_10001273 3300005981 Bacteria 26199
21 Ga0075429_100028044 3300006880 Bacteria 4886
22 Ga0068865_100137812 3300006881 Bacteria 1836
23 Ga0097620_100086312 3300006931 Bacteria 3185
24 Ga0097620_100499512 3300006931 Bacteria 1311
25 Ga0099795_10002553 3300007788 Bacteria 4312
26 Ga0105251_10000218 3300009011 Bacteria 58480
27 Ga0105251_10000383 3300009011 Bacteria 43319
28 Ga0105244_10000584 3300009036 Bacteria 32752
29 Ga0105250_10000124 3300009092 Bacteria 66678
30 Ga0105240_10186398 3300009093 Bacteria 2444
31 Ga0111539_10000532 3300009094 Bacteria 48316
32 Ga0111539_10011344 3300009094 Bacteria 11191
33 Ga0111539_10713031 3300009094 Bacteria 1168
34 Ga0114129_10008486 3300009147 Bacteria 14641
35 Ga0114129_10010228 3300009147 Bacteria 13382
36 Ga0105243_10000047 3300009148 Bacteria 154272
37 Ga0105243_10013430 3300009148 Bacteria 6193
38 Ga0105249_10051264 3300009553 Bacteria 3764
39 Ga0105239_10611720 3300010375 Bacteria 1243
40 Ga0157371_10000356 3300013102 Bacteria 58315
41 Ga0157370_10000613 3300013104 Bacteria 44330
42 Ga0157370_10076872 3300013104 Bacteria 3144
43 Ga0157374_10007793 3300013296 Bacteria 9139
44 Ga0157378_10005293 3300013297 Bacteria 11332
45 Ga0157380_10013462 3300014326 Bacteria 5964
46 Ga0157380_10109047 3300014326 Bacteria 2322
47 Ga0182008_10000066 3300014497 Bacteria 88047
48 Ga0182008_10130198 3300014497 Bacteria 1254
49 Ga0157379_10306556 3300014968 Bacteria 1448
50 Ga0182006_1000599 3300015261 Bacteria 26287
51 Ga0213875_10000996 3300021388 Bacteria 20184
52 Ga0209760_100059 3300025207 Bacteria 97774
53 Ga0207427_100014 3300025231 Bacteria 561361
54 Ga0209437_100016 3300025233 Bacteria 710118
55 Ga0209148_1001461 3300025254 Bacteria 11957
56 Ga0209233_1000036 3300025261 Bacteria 561361
57 Ga0209455_1000999 3300025272 Bacteria 14262
58 Ga0209758_1000060 3300025297 Bacteria 324326
59 Ga0209051_1039293 3300025303 Bacteria 1711
60 Ga0209257_1000749 3300025304 Bacteria 49070
61 Ga0207696_1000008 3300025711 Bacteria 568181
62 Ga0207696_1000012 3300025711 Bacteria 527363
63 Ga0207655_1014425 3300025728 Bacteria 4465
64 Ga0207713_1000129 3300025735 Bacteria 116027
65 Ga0207713_1000223 3300025735 Bacteria 76591
66 Ga0207684_10072448 3300025910 Bacteria 2926
67 Ga0207707_10119550 3300025912 Bacteria 2303
68 Ga0207693_10201397 3300025915 Bacteria 1566
69 Ga0207652_10443855 3300025921 Bacteria 1170
70 Ga0207646_10003603 3300025922 Bacteria 17364
71 Ga0207687_10057909 3300025927 Bacteria 2724
72 Ga0207700_10002280 3300025928 Bacteria 11009
73 Ga0207709_10000249 3300025935 Bacteria 65683
74 Ga0207669_10011034 3300025937 Bacteria 4377
75 Ga0207665_10017497 3300025939 Bacteria 4711
76 Ga0207712_10027980 3300025961 Bacteria 3767
77 Ga0207675_100344175 3300026118 Bacteria 1460
78 Ga0209371_1000020 3300027312 Bacteria 556282
79 Ga0209371_1000935 3300027312 Bacteria 22868
80 Ga0207428_10000045 3300027907 Bacteria 194471
81 Ga0207428_10014203 3300027907 Bacteria 6929
82 Ga0268265_10033215 3300028380 Bacteria 3749
83 Ga0268265_10134961 3300028380 Bacteria 2057
84 Ga0265338_10192527 3300028800 Bacteria 1545
85 Ga0268256_1010161 3300030500 Bacteria 3065
86 Ga0268256_1028354 3300030500 Bacteria 1383
87 Ga0265760_10007870 3300031090 Bacteria 3044
88 Ga0265332_10102305 3300031238 Bacteria 1208
89 Ga0265340_10061729 3300031247 Bacteria 1792
90 Ga0265331_10011469 3300031250 Bacteria 4850
91 Ga0307513_10031412 3300031456 Bacteria 6015
92 Ga0265313_10000127 3300031595 Bacteria 76864
93 Ga0265314_10021148 3300031711 Bacteria 5010
94 Ga0316578_10048210 3300031728 Bacteria 2487
95 Ga0307516_10253070 3300031730 Bacteria 1455
96 Ga0316577_10136840 3300031733 Bacteria 1379
97 Ga0307410_10057342 3300031852 Bacteria 2652
98 Ga0307407_10046986 3300031903 Bacteria 2447
99 Ga0316583_10041928 3300032133 Bacteria 1619
100 Ga0373926_0046276 3300035083 Bacteria 1561
101 Ga0373932_0046057 3300035112 Bacteria 1278
102 Ga0373945_0064279 3300035116 Bacteria 1376
103 Ga0373943_0031177 3300035170 Bacteria 2528
104 Ga0316574_0246912 3300035398 Bacteria 1141
105 Ga0373947_0040624 3300035725 Bacteria 2771
106 Ga0373947_0053584 3300035725 Bacteria 2433
107 Ga0373947_0121690 3300035725 Bacteria 1658
108 Ga0373937_0058306 3300036401 Bacteria 3547
109 Ga0373937_0500414 3300036401 Bacteria 1155
110 Ga0316582_0283459 3300036647 Bacteria 1137
111 Ga0316584_0017575 3300036712 Bacteria 5146
112 Ga0436364_0730168 3300037853 Bacteria 28599
113 Ga0436365_0587417 3300039437 Bacteria 17179
114 Ga0436365_1735761 3300039437 Bacteria 2399
115 Ga0436365_1861111 3300039437 Bacteria 1906
116 Ga0439456_002825 3300042013 Bacteria 3499
117 Ga0439463_000124 3300042016 Bacteria 19185
118 Ga0453684_0064627 3300044712 Bacteria 4673
119 Ga0451576_0003729 3300045051 Bacteria 20607
120 Ga0495592_0054644 3300046454 Bacteria 2958
121 Ga0495629_0003663 3300046459 Bacteria 11619
122 Ga0495653_0004272 3300046463 Bacteria 11573
123 Ga0495650_0055218 3300046471 Bacteria 1617
124 Ga0495580_0009007 3300046472 Bacteria 7879
125 Ga0495582_0008183 3300046473 Bacteria 5772
126 Ga0495662_0010964 3300046476 Bacteria 4433
127 Ga0495662_0024955 3300046476 Bacteria 2887
128 Ga0495664_0000210 3300046477 Bacteria 28048
129 Ga0495585_0001225 3300046492 Bacteria 20783
130 Ga0495596_0025307 3300046500 Bacteria 2400
131 Ga0495606_0013243 3300046507 Bacteria 6539
132 Ga0495618_0089932 3300046514 Bacteria 1963
133 Ga0495628_0022632 3300046516 Bacteria 5161
134 Ga0495630_0000796 3300046517 Bacteria 22215
135 Ga0495630_0002071 3300046517 Bacteria 13944
136 Ga0495643_0006953 3300046522 Bacteria 7357
137 Ga0495648_0001554 3300046524 Bacteria 22421
138 Ga0495666_0001480 3300046526 Bacteria 11475
139 Ga0495652_0020518 3300046529 Bacteria 5874
140 Ga0495665_0002978 3300046531 Bacteria 9155
141 Ga0495640_0002992 3300046533 Bacteria 13606
142 Ga0495586_0002543 3300046535 Bacteria 9870
143 Ga0495586_0035987 3300046535 Unclassified 2659
144 Ga0495587_0036165 3300046536 Bacteria 2971
145 Ga0495645_0001174 3300046543 Bacteria 17838
146 Ga0495622_0037772 3300046557 Bacteria 2249
147 Ga0495634_0001225 3300046642 Bacteria 23670
148 Ga0495634_0012610 3300046642 Bacteria 6119
149 Ga0495635_0015683 3300046663 Bacteria 5293
150 Ga0495661_0000011 3300046665 Bacteria 277997
151 Ga0495661_0007482 3300046665 Bacteria 7615
152 Ga0495588_0007067 3300046674 Bacteria 5088
153 Ga0495599_0003532 3300046678 Bacteria 9153
154 Ga0495623_0003848 3300046679 Bacteria 9895
155 Ga0495623_0024179 3300046679 Bacteria 3918
156 Ga0495646_0000653 3300046680 Bacteria 18982
157 Ga0495613_0044251 3300046689 Bacteria 3294
158 Ga0495624_0004883 3300046690 Bacteria 9742
159 Ga0495649_0000027 3300046694 Bacteria 164157
160 Ga0495581_0011070 3300047315 Bacteria 5212
161 Ga0495604_0002364 3300047317 Bacteria 15127
162 Ga0495604_0004265 3300047317 Bacteria 11320
163 Ga0495604_0095748 3300047317 Bacteria 2192
164 Ga0495674_0006402 3300047319 Bacteria 11290
165 Ga0495676_0010913 3300047321 Bacteria 8212
166 Ga0495676_0017133 3300047321 Bacteria 6412
167 Ga0495680_0010581 3300047322 Bacteria 8229
168 Ga0495680_0029924 3300047322 Bacteria 4453
169 Ga0495680_0056071 3300047322 Bacteria 3052
170 Ga0495675_0003759 3300047444 Bacteria 9182
171 Ga0495675_0040706 3300047444 Bacteria 2961
172 Ga0495679_002599 3300047446 Bacteria 9071
173 Ga0495684_0015020 3300047471 Bacteria 5963
174 Ga0495686_0156210 3300047472 Bacteria 1336
175 Ga0495593_0001580 3300047673 Bacteria 13429
176 Ga0495602_0027229 3300048088 Bacteria 5497
177 Ga0495602_0036766 3300048088 Bacteria 4552
178 Ga0495614_0017827 3300048089 Bacteria 3080
179 Ga0495626_0003035 3300048091 Bacteria 11048
180 Ga0496105_0373419 3300048908 Bacteria 1136
181 Ga0496106_0112963 3300048909 Bacteria 2117
182 Ga0496109_0301174 3300048912 Bacteria 1512
183 Ga0496111_0028108 3300048914 Bacteria 3984
184 Ga0496111_0153802 3300048914 Bacteria 1707
185 Ga0496112_0068344 3300048915 Bacteria 3508
186 Ga0496112_0184178 3300048915 Bacteria 2052
187 Ga0496113_0012780 3300048916 Bacteria 5657
188 Ga0496116_0000239 3300048919 Bacteria 100609
189 Ga0496117_0000553 3300048920 Bacteria 61439
190 Ga0496118_0022083 3300048921 Bacteria 5577
191 Ga0496119_0012497 3300048922 Bacteria 6888
192 Ga0496120_0009494 3300048923 Bacteria 6891
193 Ga0496121_0000262 3300048924 Bacteria 109686
194 Ga0496122_0035237 3300048925 Bacteria 4076
195 Ga0496123_0027568 3300048926 Bacteria 4227
196 Ga0496123_0036103 3300048926 Bacteria 3511
197 Ga0496124_0003561 3300048927 Bacteria 18931
198 Ga0496124_0064101 3300048927 Bacteria 3068
199 Ga0496124_0142907 3300048927 Bacteria 1886
200 Ga0496125_0047528 3300048928 Bacteria 3587
201 Ga0496125_0171733 3300048928 Bacteria 1456
202 Ga0496126_0049384 3300048929 Bacteria 3841
203 Ga0496126_0275198 3300048929 Bacteria 1396
204 Ga0495678_012077 3300049459 Bacteria 4105
205 Ga0501031_0150301 3300049568 Bacteria 1522
206 Ga0501032_0002250 3300049569 Bacteria 15181
207 Ga0501033_0003633 3300049570 Bacteria 12579
208 Ga0501033_0092633 3300049570 Bacteria 2210
209 Ga0501034_0043917 3300049571 Bacteria 4520
210 Ga0501034_0120297 3300049571 Bacteria 2612
211 Ga0501034_0140173 3300049571 Bacteria 2398
212 Ga0501034_0301183 3300049571 Bacteria 1540
213 Ga0501036_0007276 3300049572 Bacteria 9014
214 Ga0501036_0017138 3300049572 Bacteria 6054
215 Ga0501037_0003692 3300049573 Bacteria 11109
216 Ga0501037_0206099 3300049573 Bacteria 1388
217 Ga0501038_0004415 3300049574 Bacteria 13085
218 Ga0501038_0044502 3300049574 Bacteria 3856
219 Ga0501039_0002374 3300049575 Bacteria 14024
220 Ga0501039_0081775 3300049575 Bacteria 2515
221 Ga0501040_0094817 3300049576 Bacteria 2077
222 Ga0501043_0004636 3300049579 Bacteria 11141
223 Ga0501046_0003222 3300049580 Bacteria 14997
224 Ga0501046_0314526 3300049580 Bacteria 1142
225 Ga0501047_0010056 3300049581 Bacteria 8942
226 Ga0501047_0021511 3300049581 Bacteria 6194
227 Ga0501047_0163769 3300049581 Bacteria 2095
228 Ga0501048_0054291 3300049582 Bacteria 2846
229 Ga0501067_0002167 3300049583 Bacteria 10827
230 Ga0501067_0029266 3300049583 Bacteria 3053
231 Ga0501068_0010116 3300049584 Bacteria 5292
232 Ga0501068_0011204 3300049584 Bacteria 5055
233 Ga0501069_0008672 3300049585 Bacteria 5353
234 Ga0501070_0003437 3300049586 Bacteria 13730
235 Ga0501070_0130344 3300049586 Bacteria 2077
236 Ga0501070_0136614 3300049586 Bacteria 2024
237 Ga0501072_0027244 3300049588 Bacteria 4459
238 Ga0501073_0024011 3300049589 Bacteria 4378
239 Ga0501074_0005168 3300049590 Bacteria 9385
240 Ga0501075_0050552 3300049591 Bacteria 3125
241 Ga0501076_0151887 3300049592 Bacteria 1884
242 Ga0501080_0006275 3300049742 Bacteria 10669
243 Ga0501080_0053732 3300049742 Bacteria 3751
244 Ga0501080_0080556 3300049742 Bacteria 3026
245 Ga0501080_0139073 3300049742 Bacteria 2246
246 Ga0501080_0344049 3300049742 Bacteria 1347
247 Ga0501080_0355182 3300049742 Bacteria 1323
248 Ga0501083_0013588 3300049744 Bacteria 5692
249 Ga0501083_0022035 3300049744 Bacteria 4423
250 Ga0501083_0039345 3300049744 Bacteria 3212
251 Ga0501035_0008761 3300049822 Bacteria 9418
252 Ga0501044_0021200 3300049823 Bacteria 6937
253 Ga0501044_0039721 3300049823 Bacteria 4907
254 Ga0501044_0050883 3300049823 Bacteria 4274
255 Ga0501044_0090134 3300049823 Bacteria 3094
256 Ga0501044_0455788 3300049823 Bacteria 1185
257 nmdc:mga0k408_39310_c1 3300050493 Bacteria 2717
258 nmdc:mga08y16_392756_c1 3300050511 Bacteria 1421
259 nmdc:mga08y16_93_c1 3300050511 Bacteria 75288
260 nmdc:mga0rr50_191454_c1 3300050513 Bacteria 1676
261 nmdc:mga08x19_40894_c1 3300050514 Bacteria 2952
262 Ga0500595_007892 3300053119 Bacteria 4380
263 Ga0500618_001889 3300053125 Bacteria 8668
264 Ga0500642_0000581 3300053130 Bacteria 10976
265 Ga0500568_0003959 3300053139 Bacteria 8056
266 Ga0500588_0003180 3300053146 Bacteria 3438
267 Ga0500590_000056 3300053148 Bacteria 27364
268 Ga0500616_0001435 3300053153 Bacteria 22882
269 Ga0500609_002842 3300053731 Bacteria 2468
270 Ga0501084_0014519 3300054114 Bacteria 6530
271 Ga0501084_0203078 3300054114 Bacteria 1672
272 Ga0590071_006027 3300059421 Bacteria 2897
273 Ga0501082_0018020 3300060353 Bacteria 6081
274 Ga0501082_0026909 3300060353 Bacteria 4955
275 Ga0501082_0314870 3300060353 Bacteria 1363
276 2547370967 2547132103 Bacteria 5115736
277 2555258242 2554235234 Bacteria 5762085
278 2601533291 2600255256 Bacteria 5597742
279 2601538655 2600255257 Bacteria 5597196
280 2601757004 2600255310 Bacteria 5600903
281 2601761541 2600255311 Bacteria 5598766
282 2603641159 2602042046 Bacteria 5483348
283 2723876017 2721755763 Bacteria 4464185
284 2791924448 2791354903 Bacteria 4937680
285 2813727498 2811995292 Bacteria 5303342
286 2814695027 2814123068 Bacteria 5687681
287 2817262853 2816332253 Bacteria 6764532
288 2842807232 2842805378 Bacteria 5385175
289 2843694454 2843690924 Bacteria 5169057
290 2883294679 2883291878 Bacteria 5894118
291 2883356831 2883354860 Bacteria 5865246
292 2888352450 2888350351 Bacteria 7372807
293 2904534031 2904530477 Bacteria 5876334
294 2904589129 2904584206 Bacteria 6028872
295 2904590389 2904589729 Bacteria 6113573
296 2904603752 2904601388 Bacteria 5884906
297 2906356621 2906354277 Bacteria 6991324
298 2919080253 2919079590 Bacteria 5946433
299 2922134537 2922130491 Bacteria 7173936
300 2922188211 2922185730 Bacteria 7113964
301 2971822200 2971820967 Bacteria 5823634
302 2977978510 2977971508 Bacteria 7472917
303 2979747967 2979742915 Bacteria 7301278
304 642617411 642555113 Bacteria 8214658
305 646812515 646564506 Bacteria 3192235
306 8005250118 8005246636 Bacteria 4933972
307 8020809611 8020807995 Bacteria 6801506
308 8040178398 8040173305 Bacteria 6827067
309 Ga0436365_1711054
310 JGI25163J39215_1000235
311 JGI25164J39214_1000077
312 JGI25165J46597_1000182
313 JGI25153J46596_10000145
314 JGI25153J46596_10000325
315 Ga0058692_1007122
316 Ga0065704_10083884
317 Ga0070713_100089503
318 Ga0070708_100183212
319 Ga0070681_10064491
320 Ga0070681_10185335
321 Ga0070706_100127656
322 Ga0070699_100054966
323 Ga0070679_100174341
324 Ga0070695_100057717
325 Ga0070693_100178900
326 Ga0068859_100086313
327 Ga0068862_100031355
328 Ga0081538_10001273
329 Ga0075429_100028044
330 Ga0068865_100137812
331 Ga0097620_100086312
332 Ga0097620_100499512
333 Ga0099795_10002553
334 Ga0105251_10000218
335 Ga0105251_10000383
336 Ga0105244_10000584
337 Ga0105250_10000124
338 Ga0105240_10186398
339 Ga0111539_10000532
340 Ga0111539_10011344
341 Ga0111539_10713031
342 Ga0114129_10008486
343 Ga0114129_10010228
344 Ga0105243_10000047
345 Ga0105243_10013430
346 Ga0105249_10051264
347 Ga0105239_10611720
348 Ga0157371_10000356
349 Ga0157370_10000613
350 Ga0157370_10076872
351 Ga0157374_10007793
352 Ga0157378_10005293
353 Ga0157380_10013462
354 Ga0157380_10109047
355 Ga0182008_10000066
356 Ga0182008_10130198
357 Ga0157379_10306556
358 Ga0182006_1000599
359 Ga0213875_10000996
360 Ga0209760_100059
361 Ga0207427_100014
362 Ga0209437_100016
363 Ga0209148_1001461
364 Ga0209233_1000036
365 Ga0209455_1000999
366 Ga0209758_1000060
367 Ga0209051_1039293
368 Ga0209257_1000749
369 Ga0207696_1000008
370 Ga0207696_1000012
371 Ga0207655_1014425
372 Ga0207713_1000129
373 Ga0207713_1000223
374 Ga0207684_10072448
375 Ga0207707_10119550
376 Ga0207693_10201397
377 Ga0207652_10443855
378 Ga0207646_10003603
379 Ga0207687_10057909
380 Ga0207700_10002280
381 Ga0207709_10000249
382 Ga0207669_10011034
383 Ga0207665_10017497
384 Ga0207712_10027980
385 Ga0207675_100344175
386 Ga0209371_1000020
387 Ga0209371_1000935
388 Ga0207428_10000045
389 Ga0207428_10014203
390 Ga0268265_10033215
391 Ga0268265_10134961
392 Ga0265338_10192527
393 Ga0268256_1010161
394 Ga0268256_1028354
395 Ga0265760_10007870
396 Ga0265332_10102305
397 Ga0265340_10061729
398 Ga0265331_10011469
399 Ga0307513_10031412
400 Ga0265313_10000127
401 Ga0265314_10021148
402 Ga0316578_10048210
403 Ga0307516_10253070
404 Ga0316577_10136840
405 Ga0307410_10057342
406 Ga0307407_10046986
407 Ga0316583_10041928
408 Ga0373926_0046276
409 Ga0373932_0046057
410 Ga0373945_0064279
411 Ga0373943_0031177
412 Ga0316574_0246912
413 Ga0373947_0040624
414 Ga0373947_0053584
415 Ga0373947_0121690
416 Ga0373937_0058306
417 Ga0373937_0500414
418 Ga0316582_0283459
419 Ga0316584_0017575
420 Ga0436364_0730168
421 Ga0436365_0587417
422 Ga0436365_1735761
423 Ga0436365_1861111
424 Ga0439456_002825
425 Ga0439463_000124
426 Ga0453684_0064627
427 Ga0451576_0003729
428 Ga0495592_0054644
429 Ga0495629_0003663
430 Ga0495653_0004272
431 Ga0495650_0055218
432 Ga0495580_0009007
433 Ga0495582_0008183
434 Ga0495662_0010964
435 Ga0495662_0024955
436 Ga0495664_0000210
437 Ga0495585_0001225
438 Ga0495596_0025307
439 Ga0495606_0013243
440 Ga0495618_0089932
441 Ga0495628_0022632
442 Ga0495630_0000796
443 Ga0495630_0002071
444 Ga0495643_0006953
445 Ga0495648_0001554
446 Ga0495666_0001480
447 Ga0495652_0020518
448 Ga0495665_0002978
449 Ga0495640_0002992
450 Ga0495586_0002543
451 Ga0495586_0035987
452 Ga0495587_0036165
453 Ga0495645_0001174
454 Ga0495622_0037772
455 Ga0495634_0001225
456 Ga0495634_0012610
457 Ga0495635_0015683
458 Ga0495661_0000011
459 Ga0495661_0007482
460 Ga0495588_0007067
461 Ga0495599_0003532
462 Ga0495623_0003848
463 Ga0495623_0024179
464 Ga0495646_0000653
465 Ga0495613_0044251
466 Ga0495624_0004883
467 Ga0495649_0000027
468 Ga0495581_0011070
469 Ga0495604_0002364
470 Ga0495604_0004265
471 Ga0495604_0095748
472 Ga0495674_0006402
473 Ga0495676_0010913
474 Ga0495676_0017133
475 Ga0495680_0010581
476 Ga0495680_0029924
477 Ga0495680_0056071
478 Ga0495675_0003759
479 Ga0495675_0040706
480 Ga0495679_002599
481 Ga0495684_0015020
482 Ga0495686_0156210
483 Ga0495593_0001580
484 Ga0495602_0027229
485 Ga0495602_0036766
486 Ga0495614_0017827
487 Ga0495626_0003035
488 Ga0496105_0373419
489 Ga0496106_0112963
490 Ga0496109_0301174
491 Ga0496111_0028108
492 Ga0496111_0153802
493 Ga0496112_0068344
494 Ga0496112_0184178
495 Ga0496113_0012780
496 Ga0496116_0000239
497 Ga0496117_0000553
498 Ga0496118_0022083
499 Ga0496119_0012497
500 Ga0496120_0009494
501 Ga0496121_0000262
502 Ga0496122_0035237
503 Ga0496123_0027568
504 Ga0496123_0036103
505 Ga0496124_0003561
506 Ga0496124_0064101
507 Ga0496124_0142907
508 Ga0496125_0047528
509 Ga0496125_0171733
510 Ga0496126_0049384
511 Ga0496126_0275198
512 Ga0495678_012077
513 Ga0501031_0150301
514 Ga0501032_0002250
515 Ga0501033_0003633
516 Ga0501033_0092633
517 Ga0501034_0043917
518 Ga0501034_0120297
519 Ga0501034_0140173
520 Ga0501034_0301183
521 Ga0501036_0007276
522 Ga0501036_0017138
523 Ga0501037_0003692
524 Ga0501037_0206099
525 Ga0501038_0004415
526 Ga0501038_0044502
527 Ga0501039_0002374
528 Ga0501039_0081775
529 Ga0501040_0094817
530 Ga0501043_0004636
531 Ga0501046_0003222
532 Ga0501046_0314526
533 Ga0501047_0010056
534 Ga0501047_0021511
535 Ga0501047_0163769
536 Ga0501048_0054291
537 Ga0501067_0002167
538 Ga0501067_0029266
539 Ga0501068_0010116
540 Ga0501068_0011204
541 Ga0501069_0008672
542 Ga0501070_0003437
543 Ga0501070_0130344
544 Ga0501070_0136614
545 Ga0501072_0027244
546 Ga0501073_0024011
547 Ga0501074_0005168
548 Ga0501075_0050552
549 Ga0501076_0151887
550 Ga0501080_0006275
551 Ga0501080_0053732
552 Ga0501080_0080556
553 Ga0501080_0139073
554 Ga0501080_0344049
555 Ga0501080_0355182
556 Ga0501083_0013588
557 Ga0501083_0022035
558 Ga0501083_0039345
559 Ga0501035_0008761
560 Ga0501044_0021200
561 Ga0501044_0039721
562 Ga0501044_0050883
563 Ga0501044_0090134
564 Ga0501044_0455788
565 nmdc:mga0k408_39310_c1
566 nmdc:mga08y16_392756_c1
567 nmdc:mga08y16_93_c1
568 nmdc:mga0rr50_191454_c1
569 nmdc:mga08x19_40894_c1
570 Ga0500595_007892
571 Ga0500618_001889
572 Ga0500642_0000581
573 Ga0500568_0003959
574 Ga0500588_0003180
575 Ga0500590_000056
576 Ga0500616_0001435
577 Ga0500609_002842
578 Ga0501084_0014519
579 Ga0501084_0203078
580 Ga0590071_006027
581 Ga0501082_0018020
582 Ga0501082_0026909
583 Ga0501082_0314870
584 2547370967
585 2555258242
586 2601533291
587 2601538655
588 2601757004
589 2601761541
590 2603641159
591 2723876017
592 2791924448
593 2813727498
594 2814695027
595 2817262853
596 2842807232
597 2843694454
598 2883294679
599 2883356831
600 2888352450
601 2904534031
602 2904589129
603 2904590389
604 2904603752
605 2906356621
606 2919080253
607 2922134537
608 2922188211
609 2971822200
610 2977978510
611 2979747967
612 642617411
613 646812515
614 8005250118
615 8020809611
616 8040178398

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00491

Arginase

Arginase family

107

380

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nip-assembly1.cif.gz_D crystal structure of pseudomonas aeruginosa guanidinopropionase complexed with 1,6-diaminohexane 0.9833 4 318
3nip-assembly1.cif.gz_D crystal structure of pseudomonas aeruginosa guanidinopropionase complexed with 1,6-diaminohexane 0.9772 4 318
1gq6-assembly1.cif.gz_C-2 proclavaminate amidino hydrolase from streptomyces clavuligerus 0.9579 15 313
1gq6-assembly1.cif.gz_A-2 proclavaminate amidino hydrolase from streptomyces clavuligerus 0.9576 15 313
1gq6-assembly1.cif.gz_B proclavaminate amidino hydrolase from streptomyces clavuligerus 0.9562 15 313
ID Description Score Start End Superfamily
3niqB00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.9858 5 315 3.40.800.10
3niqB00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.9765 5 315 3.40.800.10
1gq7A00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.9633 15 313 3.40.800.10
1gq7A00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.954 15 313 3.40.800.10
3nioD00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.9391 5 309 3.40.800.10
ID Description Score Start End GO Terms
AF-A0A3D5Y6S3-F1-model_v4 Agmatinase 0.9912 145 317 GO:0008783
GO:0033389
GO:0046872
AF-A0A485BZ65-F1-model_v4 Guanidinobutyrase (EC 3.5.3.7) 0.9906 144 317 GO:0008783
GO:0033389
GO:0046872
GO:0047971
AF-A0A176F771-F1-model_v4 Agmatinase 0.9885 53 290 GO:0008783
GO:0033389
GO:0046872
AF-A0A838MFW6-F1-model_v4 deleted 0.9878 126 314
AF-A0A4Y8I1I4-F1-model_v4 Agmatinase 0.9876 98 317 GO:0008783
GO:0033389
GO:0046872

Map