F399705

General Info

Members Datasets Scaffolds Average Seq Length
308 199 616 221

Family's Representative Sequence

Representative Sequence 3300021361|Ga0213872_10005328|Ga0213872_100053283
Length 250
Sequence MGPADFAINFFVALFALIDPIGNVPLFAAATAGTTRSGRRLTAIYISIFAFAFLTFFFVTGLALLRFFGISMPAFRIAGGILLLLLGLDMARGDLLHSVADSEREAAELSTQARALAQFERLIVPFGMPLLIGPGAISSAVIFAEEARQFGPTGFAIGVAVIAAICLIIVAAFWFTDLISRALGRVGAAVVIRVLGLILCAMAVQFMLIGLRDSTVNLVRRETAAPYQNDRHHTAAELLGPAPGARPATR

Samples

Sample ID Description Type Environment
1 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
5 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
6 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
18 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
19 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
20 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
21 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
22 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
23 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
24 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
25 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
26 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
27 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
28 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
29 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
30 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
32 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
33 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
50 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
51 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
54 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
55 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
56 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
57 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
58 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
59 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
60 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
61 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
62 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
63 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
64 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
65 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
66 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
67 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
68 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
69 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
70 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
71 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
72 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
73 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
74 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
75 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
76 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
77 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
78 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
79 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
81 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
82 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
83 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
84 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
92 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
93 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
94 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
95 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
96 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
99 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
100 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
101 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
102 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
103 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
104 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
105 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
106 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
107 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
108 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
109 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
113 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
114 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
117 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
118 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
119 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
120 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
121 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
122 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
123 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
124 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
125 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
126 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
127 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
128 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
129 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
130 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
131 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
138 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
139 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
140 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
141 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
144 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
149 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
150 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
151 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
152 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
153 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
154 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
155 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
156 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
157 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
158 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
159 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
160 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
161 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
162 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
163 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
164 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
165 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
166 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
167 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
168 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
169 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
170 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
171 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
172 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
173 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
174 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
175 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
176 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
177 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
178 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
179 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
180 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
181 2643221583 Caulobacter sp. Root655 Isolate Unclassified
182 2643221584 Caulobacter sp. Root656 Isolate Unclassified
183 2643221640 Caulobacter sp. Root342 Isolate Unclassified
184 2643221642 Caulobacter sp. Root343 Isolate Unclassified
185 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
186 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
187 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
188 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
189 2818991435 Caulobacter henricii 536 Isolate Unclassified
190 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
191 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
192 2849560528 Caulobacter zeae 410 Isolate Unclassified
193 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
194 2851153111 Caulobacter radicis 736 Isolate Unclassified
195 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
196 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
197 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
198 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
199 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.36
Metatranscriptomes 4.87
Isolates 8.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.45
Nodule 0
Rhizoplane 3.25
Rhizosphere 63.96
Stem 0
Stem Tuber 0
Unclassified 0.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213872_10005328 3300021361 Bacteria 6639
2 JGI25153J46596_10070603 3300003215 Bacteria 906
3 rootL2_10036287 3300003322 Bacteria 3356
4 Ga0055524_1004422 3300003775 Bacteria 6485
5 Ga0055524_1015331 3300003775 Bacteria 2798
6 Ga0055536_1007572 3300003781 Bacteria 4830
7 Ga0055530_10008227 3300003791 Bacteria 4216
8 Ga0055531_10000918 3300003794 Bacteria 23893
9 Ga0065165_1033609 3300005262 Bacteria 1595
10 Ga0070658_10139294 3300005327 Bacteria 2026
11 Ga0070673_100040482 3300005364 Bacteria 3576
12 Ga0068853_100239644 3300005539 Bacteria 1662
13 Ga0070672_100278347 3300005543 Bacteria 1414
14 Ga0070664_100071036 3300005564 Bacteria 2983
15 Ga0068864_100003306 3300005618 Bacteria 13316
16 Ga0068861_100205625 3300005719 Bacteria 1655
17 Ga0068862_100042260 3300005844 Bacteria 3883
18 Ga0075370_10144747 3300006353 Bacteria 1391
19 Ga0075370_10159204 3300006353 Bacteria 1325
20 Ga0105248_10829389 3300009177 Bacteria 1044
21 Ga0105238_10596633 3300009551 Bacteria 1112
22 Ga0105238_10978738 3300009551 Bacteria 866
23 Ga0157373_10000445 3300013100 Bacteria 32823
24 Ga0157373_10026816 3300013100 Bacteria 4158
25 Ga0163162_10356236 3300013306 Bacteria 1596
26 Ga0157375_10010457 3300013308 Bacteria 8166
27 Ga0157375_10856224 3300013308 Bacteria 1055
28 Ga0163163_10090895 3300014325 Bacteria 3066
29 Ga0182008_10258617 3300014497 Bacteria 900
30 Ga0163161_10536278 3300017792 Bacteria 957
31 Ga0213872_10034679 3300021361 Bacteria 2309
32 Ga0213872_10127662 3300021361 Bacteria 1122
33 Ga0213876_10008711 3300021384 Bacteria 5483
34 Ga0209565_1000513 3300025263 Bacteria 27885
35 Ga0209673_1001161 3300025273 Bacteria 28708
36 Ga0209675_1002872 3300025291 Bacteria 8547
37 Ga0209675_1008956 3300025291 Bacteria 3598
38 Ga0209676_1000115 3300025292 Bacteria 205183
39 Ga0209676_1003719 3300025292 Bacteria 9084
40 Ga0209676_1004579 3300025292 Bacteria 7640
41 Ga0209564_1002745 3300025295 Bacteria 13240
42 Ga0209564_1018593 3300025295 Bacteria 2640
43 Ga0209758_1000238 3300025297 Bacteria 115807
44 Ga0209758_1005294 3300025297 Bacteria 10075
45 Ga0209050_1002131 3300025298 Bacteria 18032
46 Ga0209050_1003359 3300025298 Bacteria 11921
47 Ga0209256_1003029 3300025299 Bacteria 12416
48 Ga0209256_1006940 3300025299 Bacteria 5784
49 Ga0209257_1000090 3300025304 Bacteria 274746
50 Ga0209257_1000272 3300025304 Bacteria 118294
51 Ga0207705_10035457 3300025909 Bacteria 3569
52 Ga0207650_10269312 3300025925 Bacteria 1384
53 Ga0207691_10342929 3300025940 Bacteria 1279
54 Ga0207711_10227688 3300025941 Bacteria 1707
55 Ga0207651_10039260 3300025960 Bacteria 3120
56 Ga0207677_10608212 3300026023 Bacteria 960
57 Ga0207639_10041481 3300026041 Bacteria 3444
58 Ga0207639_10067492 3300026041 Bacteria 2783
59 Ga0207641_10366128 3300026088 Bacteria 1377
60 Ga0207648_11077285 3300026089 Bacteria 753
61 Ga0207676_10001283 3300026095 Bacteria 18682
62 Ga0207675_100151808 3300026118 Bacteria 2205
63 Ga0207683_10054640 3300026121 Bacteria 3501
64 Ga0268265_10013896 3300028380 Bacteria 5480
65 Ga0265318_10082398 3300028577 Unclassified 1187
66 Ga0307517_10006083 3300028786 Bacteria 17981
67 Ga0307515_10008637 3300028794 Bacteria 19826
68 Ga0307515_10028035 3300028794 Bacteria 9590
69 Ga0307515_10151617 3300028794 Bacteria 2419
70 Ga0265338_10042563 3300028800 Bacteria 4227
71 Ga0265338_10049438 3300028800 Bacteria 3812
72 Ga0265338_10252863 3300028800 Bacteria 1299
73 Ga0265340_10100525 3300031247 Bacteria 1344
74 Ga0265331_10089600 3300031250 Bacteria 1423
75 Ga0265327_10000548 3300031251 Bacteria 64199
76 Ga0265327_10001355 3300031251 Bacteria 31646
77 Ga0265327_10149553 3300031251 Bacteria 1085
78 Ga0265316_10480034 3300031344 Bacteria 890
79 Ga0307513_10000127 3300031456 Bacteria 107100
80 Ga0307508_10140925 3300031616 Bacteria 2015
81 Ga0316575_10007082 3300031665 Bacteria 4057
82 Ga0316575_10048971 3300031665 Bacteria 1681
83 Ga0316575_10053651 3300031665 Bacteria 1605
84 Ga0316579_10001419 3300031691 Bacteria 8694
85 Ga0316579_10008270 3300031691 Bacteria 4333
86 Ga0316579_10011032 3300031691 Bacteria 3832
87 Ga0265314_10017809 3300031711 Bacteria 5566
88 Ga0316576_10002993 3300031727 Bacteria 9803
89 Ga0316576_10014890 3300031727 Bacteria 5202
90 Ga0316576_10066907 3300031727 Bacteria 2644
91 Ga0316576_10071075 3300031727 Bacteria 2566
92 Ga0316576_10274625 3300031727 Bacteria 1263
93 Ga0316576_10458273 3300031727 Bacteria 941
94 Ga0316576_10505932 3300031727 Unclassified 888
95 Ga0316578_10001670 3300031728 Bacteria 9249
96 Ga0316578_10150023 3300031728 Bacteria 1404
97 Ga0316577_10031008 3300031733 Bacteria 2986
98 Ga0316577_10106446 3300031733 Bacteria 1573
99 Ga0316577_10146267 3300031733 Bacteria 1331
100 Ga0307413_10063851 3300031824 Bacteria 2285
101 Ga0307413_10138940 3300031824 Bacteria 1675
102 Ga0307410_10057038 3300031852 Bacteria 2658
103 Ga0307410_10241593 3300031852 Bacteria 1400
104 Ga0307406_10000600 3300031901 Bacteria 20591
105 Ga0307412_10001265 3300031911 Bacteria 14177
106 Ga0307412_10510936 3300031911 Bacteria 1002
107 Ga0307409_100545144 3300031995 Bacteria 1138
108 Ga0307414_10086832 3300032004 Bacteria 2309
109 Ga0307414_10393980 3300032004 Bacteria 1201
110 Ga0307414_10402986 3300032004 Bacteria 1188
111 Ga0307414_10543437 3300032004 Bacteria 1034
112 Ga0307411_10047629 3300032005 Bacteria 2773
113 Ga0307411_10513351 3300032005 Bacteria 1016
114 Ga0316583_10005064 3300032133 Bacteria 4718
115 Ga0316585_10000476 3300032137 Bacteria 9452
116 Ga0316585_10024938 3300032137 Bacteria 1852
117 Ga0316580_10018539 3300032139 Bacteria 2141
118 Ga0316593_10003343 3300032168 Bacteria 3966
119 Ga0316593_10005058 3300032168 Bacteria 3444
120 Ga0316593_10031713 3300032168 Bacteria 1723
121 Ga0307510_10119722 3300033180 Bacteria 2342
122 Ga0316592_1000340 3300033524 Bacteria 6089
123 Ga0316592_1000970 3300033524 Bacteria 4412
124 Ga0316588_1000180 3300033528 Bacteria 7196
125 Ga0316588_1000398 3300033528 Bacteria 5761
126 Ga0316588_1000804 3300033528 Bacteria 4708
127 Ga0316588_1014352 3300033528 Bacteria 1732
128 Ga0316587_1002403 3300033529 Bacteria 2493
129 Ga0316587_1002871 3300033529 Bacteria 2352
130 Ga0316596_1000796 3300033541 Bacteria 5828
131 Ga0316596_1005164 3300033541 Bacteria 2970
132 Ga0316596_1009681 3300033541 Bacteria 2314
133 Ga0316596_1076578 3300033541 Bacteria 897
134 Ga0316574_0000732 3300035398 Bacteria 14065
135 Ga0316574_0027126 3300035398 Bacteria 3449
136 Ga0316582_0003263 3300036647 Bacteria 7911
137 Ga0316582_0007233 3300036647 Bacteria 5902
138 Ga0316582_0077402 3300036647 Bacteria 2164
139 Ga0316582_0611600 3300036647 Unclassified 750
140 Ga0316582_0613002 3300036647 Bacteria 749
141 Ga0316584_0004964 3300036712 Bacteria 8859
142 Ga0316584_0011526 3300036712 Bacteria 6214
143 Ga0316584_0194806 3300036712 Bacteria 1497
144 Ga0316584_0622950 3300036712 Bacteria 746
145 Ga0395899_0499443 3300037312 Bacteria 789
146 Ga0395900_0132001 3300037418 Bacteria 2559
147 Ga0395898_0077192 3300037466 Bacteria 3216
148 Ga0395905_0359656 3300037471 Bacteria 1348
149 Ga0395905_0417411 3300037471 Bacteria 1238
150 Ga0316581_0004569 3300037588 Bacteria 3537
151 Ga0316581_0092572 3300037588 Bacteria 930
152 Ga0395901_0024898 3300038443 Bacteria 6144
153 Ga0395901_0159719 3300038443 Bacteria 2367
154 Ga0436365_0231040 3300039437 Bacteria 1538
155 Ga0436365_0839870 3300039437 Bacteria 5913
156 Ga0436361_0098249 3300039447 Bacteria 9337
157 Ga0436361_0114601 3300039447 Bacteria 2694
158 Ga0436361_0559282 3300039447 Bacteria 911
159 Ga0436361_0934563 3300039447 Bacteria 10987
160 Ga0436361_1033608 3300039447 Bacteria 1361
161 Ga0436363_0089936 3300039450 Bacteria 1063
162 Ga0439459_0004940 3300042438 Bacteria 2170
163 Ga0450901_001754 3300042533 Bacteria 2437
164 Ga0495627_000377 3300046453 Bacteria 41082
165 Ga0495590_0002555 3300046457 Bacteria 7526
166 Ga0495629_0054152 3300046459 Bacteria 2806
167 Ga0495629_0412375 3300046459 Bacteria 917
168 Ga0495638_0000442 3300046460 Bacteria 49958
169 Ga0495638_0001642 3300046460 Bacteria 19845
170 Ga0495638_0004832 3300046460 Bacteria 10153
171 Ga0495650_0000046 3300046471 Bacteria 342987
172 Ga0495650_0009359 3300046471 Bacteria 5581
173 Ga0495584_0337180 3300046491 Bacteria 766
174 Ga0495585_0142957 3300046492 Bacteria 1252
175 Ga0495583_0000003 3300046506 Bacteria 709273
176 Ga0495606_0004507 3300046507 Bacteria 13870
177 Ga0495610_0000633 3300046512 Bacteria 34507
178 Ga0495610_0002990 3300046512 Bacteria 13624
179 Ga0495610_0006053 3300046512 Bacteria 8444
180 Ga0495616_0000383 3300046513 Bacteria 34656
181 Ga0495616_0152324 3300046513 Bacteria 1045
182 Ga0495620_0086030 3300046515 Bacteria 1266
183 Ga0495631_0002709 3300046518 Bacteria 9829
184 Ga0495631_0077154 3300046518 Bacteria 1438
185 Ga0495632_0002328 3300046519 Bacteria 14620
186 Ga0495637_0016375 3300046520 Bacteria 3466
187 Ga0495643_0022889 3300046522 Bacteria 3558
188 Ga0495648_0000039 3300046524 Bacteria 185430
189 Ga0495648_0081779 3300046524 Bacteria 1836
190 Ga0495642_0015201 3300046528 Bacteria 2988
191 Ga0495654_0000039 3300046530 Bacteria 185363
192 Ga0495622_0010730 3300046557 Bacteria 4227
193 Ga0495668_0000040 3300046616 Bacteria 230681
194 Ga0495668_0002186 3300046616 Bacteria 16724
195 Ga0495668_0005894 3300046616 Bacteria 8160
196 Ga0495668_0126270 3300046616 Bacteria 1400
197 Ga0495668_0272709 3300046616 Bacteria 927
198 Ga0495611_0009392 3300046648 Bacteria 4135
199 Ga0495625_0000069 3300046660 Bacteria 168800
200 Ga0495625_0001580 3300046660 Bacteria 27097
201 Ga0495625_0044569 3300046660 Bacteria 3210
202 Ga0495625_0045008 3300046660 Bacteria 3192
203 Ga0495625_0193350 3300046660 Bacteria 1346
204 Ga0495669_0000006 3300046684 Bacteria 190838
205 Ga0495669_0026572 3300046684 Bacteria 2530
206 Ga0495613_0002703 3300046689 Bacteria 13312
207 Ga0495649_0000171 3300046694 Bacteria 56672
208 Ga0495589_0015181 3300046794 Bacteria 3965
209 Ga0495672_0004217 3300047320 Bacteria 11890
210 Ga0495672_0082609 3300047320 Bacteria 1786
211 Ga0495672_0086172 3300047320 Bacteria 1738
212 Ga0495677_0038459 3300047445 Bacteria 1748
213 Ga0495679_022583 3300047446 Bacteria 2150
214 Ga0495673_0001020 3300047469 Bacteria 24700
215 Ga0495673_0001343 3300047469 Bacteria 19989
216 Ga0495686_0002348 3300047472 Bacteria 18058
217 Ga0495686_0019017 3300047472 Bacteria 4595
218 Ga0495593_0118952 3300047673 Bacteria 1345
219 Ga0496100_0087949 3300048903 Bacteria 2114
220 Ga0496101_0114744 3300048904 Bacteria 2031
221 Ga0496102_0025142 3300048905 Bacteria 5297
222 Ga0496105_0190001 3300048908 Bacteria 1680
223 Ga0496106_0062135 3300048909 Bacteria 2835
224 Ga0496106_0485822 3300048909 Bacteria 992
225 Ga0496107_0154764 3300048910 Bacteria 1697
226 Ga0496109_0029492 3300048912 Bacteria 4914
227 Ga0496112_0038911 3300048915 Bacteria 4646
228 Ga0496115_0222076 3300048918 Bacteria 1559
229 Ga0496116_0031629 3300048919 Bacteria 3784
230 Ga0496121_0009788 3300048924 Bacteria 10954
231 Ga0496121_0101310 3300048924 Bacteria 2221
232 Ga0496123_0079156 3300048926 Bacteria 2010
233 Ga0496123_0175367 3300048926 Bacteria 1126
234 Ga0496124_0019539 3300048927 Bacteria 6299
235 Ga0496124_0337914 3300048927 Bacteria 1071
236 Ga0496124_0469927 3300048927 Bacteria 852
237 Ga0496125_0011112 3300048928 Bacteria 9031
238 Ga0496126_0011392 3300048929 Bacteria 9212
239 Ga0495678_001042 3300049459 Bacteria 23497
240 Ga0501033_0482430 3300049570 Bacteria 859
241 Ga0501047_0035183 3300049581 Bacteria 4838
242 Ga0501238_003081 3300049671 Bacteria 2036
243 Ga0501044_0443785 3300049823 Bacteria 1205
244 Ga0501044_0486372 3300049823 Bacteria 1137
245 nmdc:mga07m45_124522_c1 3300050496 Bacteria 1490
246 nmdc:mga07m45_219184_c1 3300050496 Bacteria 1107
247 Ga0500578_0000041 3300053086 Bacteria 129580
248 Ga0500644_0000511 3300053088 Bacteria 16595
249 Ga0500651_0003660 3300053093 Bacteria 8457
250 Ga0500651_0272910 3300053093 Bacteria 977
251 Ga0500566_0045903 3300053094 Bacteria 2513
252 Ga0500566_0081849 3300053094 Bacteria 1795
253 Ga0500641_0044683 3300053096 Bacteria 1802
254 Ga0500554_020780 3300053102 Bacteria 1810
255 Ga0500556_0009645 3300053104 Bacteria 2812
256 Ga0500562_000994 3300053108 Bacteria 6920
257 Ga0500594_0007302 3300053118 Bacteria 2499
258 Ga0500595_005608 3300053119 Bacteria 5461
259 Ga0500595_006155 3300053119 Bacteria 5134
260 Ga0500595_089989 3300053119 Bacteria 889
261 Ga0500608_000487 3300053122 Bacteria 14877
262 Ga0500608_009212 3300053122 Bacteria 4184
263 Ga0500618_000014 3300053125 Bacteria 177186
264 Ga0500652_002690 3300053131 Bacteria 5366
265 Ga0500658_0021451 3300053134 Bacteria 2447
266 Ga0500658_0201136 3300053134 Bacteria 911
267 Ga0500559_0000001 3300053136 Bacteria 325464
268 Ga0500559_0000090 3300053136 Bacteria 72588
269 Ga0500559_0002213 3300053136 Bacteria 10270
270 Ga0500559_0068124 3300053136 Bacteria 1598
271 Ga0500564_000911 3300053138 Bacteria 9561
272 Ga0500573_0056049 3300053140 Bacteria 2262
273 Ga0500573_0085531 3300053140 Bacteria 1788
274 Ga0500577_0001550 3300053142 Bacteria 5860
275 Ga0500590_082159 3300053148 Bacteria 1580
276 Ga0500616_0088224 3300053153 Bacteria 1542
277 Ga0500622_0003933 3300053156 Bacteria 9606
278 Ga0500627_0009892 3300053158 Bacteria 3455
279 Ga0500625_039731 3300053729 Bacteria 2216
280 Ga0500645_001922 3300053730 Bacteria 9876
281 Ga0500596_007361 3300053735 Bacteria 1807
282 2511124446 2510917020 Bacteria 5657507
283 2585150191 2582581279 Bacteria 4980720
284 2585153457 2582581280 Bacteria 5994497
285 2585196830 2582581293 Bacteria 5907401
286 2587919846 2585428106 Bacteria 5179711
287 2643783072 2643221552 Bacteria 5708754
288 2643884575 2643221574 Bacteria 2789653
289 2643922648 2643221583 Bacteria 5218014
290 2643930326 2643221584 Bacteria 5511711
291 2644223527 2643221640 Bacteria 5258820
292 2644236384 2643221642 Bacteria 5357871
293 2644351410 2643221663 Bacteria 3425771
294 2644509361 2643221691 Bacteria 5093099
295 2644549041 2643221699 Bacteria 5731501
296 2644553229 2643221699 Bacteria 5731501
297 2792463120 2791355048 Bacteria 5832535
298 2819537715 2818991435 Bacteria 5433759
299 2819647492 2818991454 Bacteria 5563326
300 2843745395 2843744320 Bacteria 5659202
301 2849561004 2849560528 Bacteria 5393480
302 2849576250 2849573788 Bacteria 5421256
303 2851157044 2851153111 Bacteria 5542585
304 2857505904 2857504554 Bacteria 5369913
305 2884963736 2884960567 Bacteria 5437054
306 2898332695 2898329390 Bacteria 5168154
307 2928531987 2928531327 Bacteria 5101314
308 2941488159 2941485952 Bacteria 3591484
309 Ga0213872_10005328
310 JGI25153J46596_10070603
311 rootL2_10036287
312 Ga0055524_1004422
313 Ga0055524_1015331
314 Ga0055536_1007572
315 Ga0055530_10008227
316 Ga0055531_10000918
317 Ga0065165_1033609
318 Ga0070658_10139294
319 Ga0070673_100040482
320 Ga0068853_100239644
321 Ga0070672_100278347
322 Ga0070664_100071036
323 Ga0068864_100003306
324 Ga0068861_100205625
325 Ga0068862_100042260
326 Ga0075370_10144747
327 Ga0075370_10159204
328 Ga0105248_10829389
329 Ga0105238_10596633
330 Ga0105238_10978738
331 Ga0157373_10000445
332 Ga0157373_10026816
333 Ga0163162_10356236
334 Ga0157375_10010457
335 Ga0157375_10856224
336 Ga0163163_10090895
337 Ga0182008_10258617
338 Ga0163161_10536278
339 Ga0213872_10034679
340 Ga0213872_10127662
341 Ga0213876_10008711
342 Ga0209565_1000513
343 Ga0209673_1001161
344 Ga0209675_1002872
345 Ga0209675_1008956
346 Ga0209676_1000115
347 Ga0209676_1003719
348 Ga0209676_1004579
349 Ga0209564_1002745
350 Ga0209564_1018593
351 Ga0209758_1000238
352 Ga0209758_1005294
353 Ga0209050_1002131
354 Ga0209050_1003359
355 Ga0209256_1003029
356 Ga0209256_1006940
357 Ga0209257_1000090
358 Ga0209257_1000272
359 Ga0207705_10035457
360 Ga0207650_10269312
361 Ga0207691_10342929
362 Ga0207711_10227688
363 Ga0207651_10039260
364 Ga0207677_10608212
365 Ga0207639_10041481
366 Ga0207639_10067492
367 Ga0207641_10366128
368 Ga0207648_11077285
369 Ga0207676_10001283
370 Ga0207675_100151808
371 Ga0207683_10054640
372 Ga0268265_10013896
373 Ga0265318_10082398
374 Ga0307517_10006083
375 Ga0307515_10008637
376 Ga0307515_10028035
377 Ga0307515_10151617
378 Ga0265338_10042563
379 Ga0265338_10049438
380 Ga0265338_10252863
381 Ga0265340_10100525
382 Ga0265331_10089600
383 Ga0265327_10000548
384 Ga0265327_10001355
385 Ga0265327_10149553
386 Ga0265316_10480034
387 Ga0307513_10000127
388 Ga0307508_10140925
389 Ga0316575_10007082
390 Ga0316575_10048971
391 Ga0316575_10053651
392 Ga0316579_10001419
393 Ga0316579_10008270
394 Ga0316579_10011032
395 Ga0265314_10017809
396 Ga0316576_10002993
397 Ga0316576_10014890
398 Ga0316576_10066907
399 Ga0316576_10071075
400 Ga0316576_10274625
401 Ga0316576_10458273
402 Ga0316576_10505932
403 Ga0316578_10001670
404 Ga0316578_10150023
405 Ga0316577_10031008
406 Ga0316577_10106446
407 Ga0316577_10146267
408 Ga0307413_10063851
409 Ga0307413_10138940
410 Ga0307410_10057038
411 Ga0307410_10241593
412 Ga0307406_10000600
413 Ga0307412_10001265
414 Ga0307412_10510936
415 Ga0307409_100545144
416 Ga0307414_10086832
417 Ga0307414_10393980
418 Ga0307414_10402986
419 Ga0307414_10543437
420 Ga0307411_10047629
421 Ga0307411_10513351
422 Ga0316583_10005064
423 Ga0316585_10000476
424 Ga0316585_10024938
425 Ga0316580_10018539
426 Ga0316593_10003343
427 Ga0316593_10005058
428 Ga0316593_10031713
429 Ga0307510_10119722
430 Ga0316592_1000340
431 Ga0316592_1000970
432 Ga0316588_1000180
433 Ga0316588_1000398
434 Ga0316588_1000804
435 Ga0316588_1014352
436 Ga0316587_1002403
437 Ga0316587_1002871
438 Ga0316596_1000796
439 Ga0316596_1005164
440 Ga0316596_1009681
441 Ga0316596_1076578
442 Ga0316574_0000732
443 Ga0316574_0027126
444 Ga0316582_0003263
445 Ga0316582_0007233
446 Ga0316582_0077402
447 Ga0316582_0611600
448 Ga0316582_0613002
449 Ga0316584_0004964
450 Ga0316584_0011526
451 Ga0316584_0194806
452 Ga0316584_0622950
453 Ga0395899_0499443
454 Ga0395900_0132001
455 Ga0395898_0077192
456 Ga0395905_0359656
457 Ga0395905_0417411
458 Ga0316581_0004569
459 Ga0316581_0092572
460 Ga0395901_0024898
461 Ga0395901_0159719
462 Ga0436365_0231040
463 Ga0436365_0839870
464 Ga0436361_0098249
465 Ga0436361_0114601
466 Ga0436361_0559282
467 Ga0436361_0934563
468 Ga0436361_1033608
469 Ga0436363_0089936
470 Ga0439459_0004940
471 Ga0450901_001754
472 Ga0495627_000377
473 Ga0495590_0002555
474 Ga0495629_0054152
475 Ga0495629_0412375
476 Ga0495638_0000442
477 Ga0495638_0001642
478 Ga0495638_0004832
479 Ga0495650_0000046
480 Ga0495650_0009359
481 Ga0495584_0337180
482 Ga0495585_0142957
483 Ga0495583_0000003
484 Ga0495606_0004507
485 Ga0495610_0000633
486 Ga0495610_0002990
487 Ga0495610_0006053
488 Ga0495616_0000383
489 Ga0495616_0152324
490 Ga0495620_0086030
491 Ga0495631_0002709
492 Ga0495631_0077154
493 Ga0495632_0002328
494 Ga0495637_0016375
495 Ga0495643_0022889
496 Ga0495648_0000039
497 Ga0495648_0081779
498 Ga0495642_0015201
499 Ga0495654_0000039
500 Ga0495622_0010730
501 Ga0495668_0000040
502 Ga0495668_0002186
503 Ga0495668_0005894
504 Ga0495668_0126270
505 Ga0495668_0272709
506 Ga0495611_0009392
507 Ga0495625_0000069
508 Ga0495625_0001580
509 Ga0495625_0044569
510 Ga0495625_0045008
511 Ga0495625_0193350
512 Ga0495669_0000006
513 Ga0495669_0026572
514 Ga0495613_0002703
515 Ga0495649_0000171
516 Ga0495589_0015181
517 Ga0495672_0004217
518 Ga0495672_0082609
519 Ga0495672_0086172
520 Ga0495677_0038459
521 Ga0495679_022583
522 Ga0495673_0001020
523 Ga0495673_0001343
524 Ga0495686_0002348
525 Ga0495686_0019017
526 Ga0495593_0118952
527 Ga0496100_0087949
528 Ga0496101_0114744
529 Ga0496102_0025142
530 Ga0496105_0190001
531 Ga0496106_0062135
532 Ga0496106_0485822
533 Ga0496107_0154764
534 Ga0496109_0029492
535 Ga0496112_0038911
536 Ga0496115_0222076
537 Ga0496116_0031629
538 Ga0496121_0009788
539 Ga0496121_0101310
540 Ga0496123_0079156
541 Ga0496123_0175367
542 Ga0496124_0019539
543 Ga0496124_0337914
544 Ga0496124_0469927
545 Ga0496125_0011112
546 Ga0496126_0011392
547 Ga0495678_001042
548 Ga0501033_0482430
549 Ga0501047_0035183
550 Ga0501238_003081
551 Ga0501044_0443785
552 Ga0501044_0486372
553 nmdc:mga07m45_124522_c1
554 nmdc:mga07m45_219184_c1
555 Ga0500578_0000041
556 Ga0500644_0000511
557 Ga0500651_0003660
558 Ga0500651_0272910
559 Ga0500566_0045903
560 Ga0500566_0081849
561 Ga0500641_0044683
562 Ga0500554_020780
563 Ga0500556_0009645
564 Ga0500562_000994
565 Ga0500594_0007302
566 Ga0500595_005608
567 Ga0500595_006155
568 Ga0500595_089989
569 Ga0500608_000487
570 Ga0500608_009212
571 Ga0500618_000014
572 Ga0500652_002690
573 Ga0500658_0021451
574 Ga0500658_0201136
575 Ga0500559_0000001
576 Ga0500559_0000090
577 Ga0500559_0002213
578 Ga0500559_0068124
579 Ga0500564_000911
580 Ga0500573_0056049
581 Ga0500573_0085531
582 Ga0500577_0001550
583 Ga0500590_082159
584 Ga0500616_0088224
585 Ga0500622_0003933
586 Ga0500627_0009892
587 Ga0500625_039731
588 Ga0500645_001922
589 Ga0500596_007361
590 2511124446
591 2585150191
592 2585153457
593 2585196830
594 2587919846
595 2643783072
596 2643884575
597 2643922648
598 2643930326
599 2644223527
600 2644236384
601 2644351410
602 2644509361
603 2644549041
604 2644553229
605 2792463120
606 2819537715
607 2819647492
608 2843745395
609 2849561004
610 2849576250
611 2851157044
612 2857505904
613 2884963736
614 2898332695
615 2928531987
616 2941488159

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01914

MarC

MarC family integral membrane protein

4

215

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bp3-assembly1.cif.gz_B cryo-em structure of the human mct2 0.4788 6 203
7dl9-assembly2.cif.gz_B crystal structure of nucleoside transporter nupg 0.4602 6 204
6ob6-assembly2.cif.gz_B human equilibrative nucleoside transporter-1, s-(4-nitrobenzyl)-6-thioinosine bound, merohedrally twinned 0.4464 1 207
7da5-assembly1.cif.gz_A cryo-em structure of the human mct1 d309n mutant in complex with basigin-2 in the inward-open conformation. 0.4451 3 203
7dla-assembly1.cif.gz_A crystal structure of nucleoside transporter nupg (d323a mutant) 0.4413 6 203
ID Description Score Start End Superfamily
af_Q8IBB7_55_248_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5022 10 206 1.20.1250.20
af_P40445_276_542_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4976 3 211 1.20.1250.20
af_P67127_16_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4894 5 204 1.20.1250.20
af_Q2R4J1_1_279_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4877 10 203 1.20.1250.20
af_A0A1D8PRS0_319_528_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.487 1 211 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A2H6JWQ5-F1-model_v4 UPF0056 membrane protein 0.8739 3 211 GO:0005886
AF-Q31NH4-F1-model_v4 UPF0056 inner membrane protein 0.8518 7 222 GO:0005886
AF-V7FSA4-F1-model_v4 UPF0056 membrane protein 0.8506 1 211 GO:0005886
AF-A0A840SX34-F1-model_v4 UPF0056 membrane protein 0.8484 5 214 GO:0005886
AF-A0A3M1PFE9-F1-model_v4 UPF0056 membrane protein 0.8459 1 210 GO:0005886

Map