F398932

General Info

Members Datasets Scaffolds Average Seq Length
306 239 289 466

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221660|2644341008
Length 505
Sequence RTEMSRSPWRARSWVWVTAMSIAGASTLGGVLMSPHASHAQPAVAAARGLPDFTDLVEQVGPAVVNIRTTERARGGQRGGGGAGPEMDEEMQEFFRRFFGVPPGQLPGQRQDPRRQAPDEEQQRGVGSGFIFTTDGYVMTNAHVVDGADEVYVTLTDKREFKAKLIGADKRTDVAVVKIEATGLPSVKIGDVSKLKVGEWVMAIGSPFGLENTVTAGIVSAKARDTGEFVPFIQTDVAINPGNSGGPLINLRGEVVGINSQILSRSGGFMGISFAIPMDEATRVADQLRAGGRVVRGRIGVQIGEVTKDVAESLGLGKAAGALVRSVEAGGPADKAGVEAGDIITRFDGKPVEKSSDLPRLVGGTKPGSKASLQVFRRGNSRDLGVTVAELEPEPGRRAAVPESKQTPTPSVVTGALGLTLANLSEEQKRELKLRGGVRVEATEGAAARAGLREGDVILSVGNVEIVDVKQFESVIAKLDKSKPINVLFRRGEWAQYALIRTAAR

Samples

Sample ID Description Type Environment
1 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
2 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
3 2643221660 Methylibium sp. Root1272 Isolate Unclassified
4 2818991436 Collimonas arenae 515 Isolate Unclassified
5 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
6 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
7 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
8 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
9 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
10 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
11 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
12 2904456579 Variovorax sp. 2002 Isolate Unclassified
13 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
14 2929520902 Variovorax beijingensis 502 Isolate Unclassified
15 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
16 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
17 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
18 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
19 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
20 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
21 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
22 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
23 3300003347 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM Metagenome Rhizosphere
24 3300003544 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
25 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
26 3300003577 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
27 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
28 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
29 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
30 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
31 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
32 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
33 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
34 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
35 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
36 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
37 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
38 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
39 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
40 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
41 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
42 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
43 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
44 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
45 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
46 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
47 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
48 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
49 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
50 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
51 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
52 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
53 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
54 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
55 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
56 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
57 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
58 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
59 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
60 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
61 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
62 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
63 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
64 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
65 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
66 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
67 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
68 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
69 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
70 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
71 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
72 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
73 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
74 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
75 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
76 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
77 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
78 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
79 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
80 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
81 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
82 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
83 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
84 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
85 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
86 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
87 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
88 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
89 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
90 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
91 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
92 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
93 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
94 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
95 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
96 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
97 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
98 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
99 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
105 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
106 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
108 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
109 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
111 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
112 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
113 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
115 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
149 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
150 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
151 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
154 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
155 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
156 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
157 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
158 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
159 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
160 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
161 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
162 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
163 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
164 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
165 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
166 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
167 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
168 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
169 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
170 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
171 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
172 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
173 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
174 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
175 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
176 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
177 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
178 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
179 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
180 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
181 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
182 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
183 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
184 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
185 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
186 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
187 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
188 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
189 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
190 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
191 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
192 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
193 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
194 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
195 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
196 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
197 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
198 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
199 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
200 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
201 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
202 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
203 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
204 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
205 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
206 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
207 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
208 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
209 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
210 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
211 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
212 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
213 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
214 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
215 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
216 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
217 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
218 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
219 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
220 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
221 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
222 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
223 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
224 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
225 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
226 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
227 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
228 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
229 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
230 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
231 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
232 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
233 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
234 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
235 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
236 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
237 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
238 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
239 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.81
Metatranscriptomes 1.63
Isolates 5.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.3
Nodule 0.65
Rhizoplane 3.59
Rhizosphere 68.3
Stem 0
Stem Tuber 0
Unclassified 9.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000281 3300002704 Bacteria 18474
2 JGI25155J39150_1000292 3300002704 Bacteria 17439
3 JGI25162J39368_1000036 3300002737 Bacteria 180433
4 JGI25154J39366_1000256 3300002738 Bacteria 33932
5 JGI25154J39366_1000594 3300002738 Bacteria 17446
6 JGI25157J39369_1000233 3300002741 Bacteria 43165
7 JGI25151J46595_10004745 3300003187 Bacteria 7136
8 JGI25165J46597_1000022 3300003214 Bacteria 357959
9 JGI26128J50194_1001123 3300003347 Bacteria 1653
10 Ga0007417J51691_1026024 3300003544 Bacteria 4417
11 Ga0007409J51694_1006362 3300003575 Bacteria 11752
12 Ga0007416J51690_1012585 3300003577 Bacteria 9861
13 Ga0006562J51391_1008722 3300003578 Bacteria 5447
14 Ga0032354_1023937 3300003693 Bacteria 8937
15 Ga0055538_1000011 3300003751 Bacteria 357959
16 Ga0055539_1000016 3300003752 Bacteria 358248
17 Ga0055533_1000019 3300003756 Bacteria 357959
18 Ga0055532_1000016 3300003758 Bacteria 327509
19 Ga0055525_1000042 3300003759 Bacteria 279804
20 Ga0055541_1000017 3300003841 Bacteria 286811
21 Ga0070676_10031456 3300005328 Bacteria 3033
22 Ga0070676_10045488 3300005328 Bacteria 2557
23 Ga0070683_100121450 3300005329 Bacteria 2468
24 Ga0068869_100040929 3300005334 Bacteria 3315
25 Ga0068869_100091354 3300005334 Bacteria 2290
26 Ga0068868_100010482 3300005338 Bacteria 6715
27 Ga0068868_100025578 3300005338 Bacteria 4493
28 Ga0070660_100010793 3300005339 Bacteria 6466
29 Ga0070660_100160125 3300005339 Bacteria 1813
30 Ga0070687_100027852 3300005343 Bacteria 2735
31 Ga0070661_100048366 3300005344 Bacteria 3113
32 Ga0070669_100013287 3300005353 Bacteria 5851
33 Ga0070675_100022460 3300005354 Bacteria 5042
34 Ga0070673_100075375 3300005364 Bacteria 2721
35 Ga0070659_100018068 3300005366 Bacteria 5318
36 Ga0070659_100034576 3300005366 Bacteria 3931
37 Ga0070659_100068687 3300005366 Bacteria 2811
38 Ga0070667_100110737 3300005367 Bacteria 2381
39 Ga0070700_100009304 3300005441 Bacteria 5386
40 Ga0070663_100023464 3300005455 Bacteria 4136
41 Ga0070681_10053501 3300005458 Bacteria 4023
42 Ga0068867_100000860 3300005459 Bacteria 20460
43 Ga0070679_100117842 3300005530 Bacteria 2640
44 Ga0070672_100034460 3300005543 Bacteria 3841
45 Ga0070672_100108424 3300005543 Bacteria 2261
46 Ga0070693_100006191 3300005547 Bacteria 5799
47 Ga0070665_100013868 3300005548 Bacteria 8106
48 Ga0070665_100098615 3300005548 Bacteria 2927
49 Ga0068855_100013899 3300005563 Bacteria 9708
50 Ga0068855_100057182 3300005563 Bacteria 4573
51 Ga0070664_100026754 3300005564 Bacteria 4789
52 Ga0068857_100106951 3300005577 Bacteria 2512
53 Ga0068857_100234980 3300005577 Bacteria 1677
54 Ga0068854_100026398 3300005578 Bacteria 3992
55 Ga0068856_100083727 3300005614 Bacteria 3168
56 Ga0070702_100010254 3300005615 Bacteria 4610
57 Ga0068852_100044771 3300005616 Bacteria 3762
58 Ga0068852_100052327 3300005616 Bacteria 3509
59 Ga0068852_100062718 3300005616 Bacteria 3234
60 Ga0068864_100009307 3300005618 Bacteria 8102
61 Ga0068866_10003468 3300005718 Bacteria 6455
62 Ga0068861_100005959 3300005719 Bacteria 8279
63 Ga0068851_10014133 3300005834 Bacteria 3786
64 Ga0068851_10034199 3300005834 Bacteria 2536
65 Ga0068858_100029993 3300005842 Bacteria 5050
66 Ga0068858_100070480 3300005842 Bacteria 3240
67 Ga0068858_100105658 3300005842 Bacteria 2628
68 Ga0068860_100037343 3300005843 Bacteria 4650
69 Ga0068860_100046096 3300005843 Bacteria 4157
70 Ga0068862_100032593 3300005844 Bacteria 4402
71 Ga0068862_100105190 3300005844 Bacteria 2474
72 Ga0068862_100113593 3300005844 Bacteria 2380
73 Ga0075363_100006576 3300006048 Bacteria 5294
74 Ga0075362_10003474 3300006177 Bacteria 5518
75 Ga0075366_10000297 3300006195 Bacteria 22376
76 Ga0075366_10004434 3300006195 Bacteria 7533
77 Ga0075366_10004646 3300006195 Bacteria 7378
78 Ga0075366_10013042 3300006195 Bacteria 4726
79 Ga0075366_10058128 3300006195 Bacteria 2297
80 Ga0097621_100018364 3300006237 Bacteria 5339
81 Ga0075370_10007135 3300006353 Bacteria 5672
82 Ga0075370_10010031 3300006353 Bacteria 4940
83 Ga0068871_100011880 3300006358 Bacteria 6406
84 Ga0075430_100037904 3300006846 Bacteria 4087
85 Ga0075434_100148731 3300006871 Bacteria 2362
86 Ga0105240_10010634 3300009093 Bacteria 12922
87 Ga0105243_10024963 3300009148 Bacteria 4564
88 Ga0105248_10000563 3300009177 Bacteria 42070
89 Ga0105248_10069447 3300009177 Bacteria 3955
90 Ga0105238_10025649 3300009551 Bacteria 6008
91 Ga0105249_10090868 3300009553 Bacteria 2855
92 Ga0105239_10145976 3300010375 Bacteria 2638
93 Ga0157373_10012697 3300013100 Bacteria 6191
94 Ga0157373_10042265 3300013100 Bacteria 3257
95 Ga0157370_10050335 3300013104 Bacteria 3982
96 Ga0157369_10104962 3300013105 Bacteria 3008
97 Ga0157374_10132131 3300013296 Bacteria 2416
98 Ga0157378_10011412 3300013297 Bacteria 7778
99 Ga0163162_10009022 3300013306 Bacteria 9694
100 Ga0157375_10065289 3300013308 Bacteria 3628
101 Ga0157380_10037532 3300014326 Bacteria 3754
102 Ga0182008_10010917 3300014497 Bacteria 4845
103 Ga0182008_10016324 3300014497 Bacteria 3859
104 Ga0157377_10001941 3300014745 Bacteria 9047
105 Ga0157379_10013752 3300014968 Bacteria 7094
106 Ga0157379_10017500 3300014968 Bacteria 6310
107 Ga0157376_10015559 3300014969 Bacteria 5751
108 Ga0157376_10041143 3300014969 Bacteria 3782
109 Ga0182007_10008751 3300015262 Bacteria 4129
110 Ga0182005_1001336 3300015265 Bacteria 10073
111 Ga0163161_10014761 3300017792 Bacteria 5441
112 Ga0163161_10021977 3300017792 Bacteria 4487
113 Ga0209435_100070 3300025206 Bacteria 63829
114 Ga0209784_100019 3300025224 Bacteria 453558
115 Ga0209566_100017 3300025225 Bacteria 453558
116 Ga0209674_100031 3300025226 Bacteria 453558
117 Ga0209147_100023 3300025229 Bacteria 437803
118 Ga0209563_100035 3300025230 Bacteria 453558
119 Ga0207427_100255 3300025231 Bacteria 41856
120 Ga0209437_100038 3300025233 Bacteria 453558
121 Ga0209258_100179 3300025242 Bacteria 137687
122 Ga0209646_1000033 3300025246 Bacteria 369507
123 Ga0209026_1000150 3300025250 Bacteria 111025
124 Ga0209677_100020 3300025253 Bacteria 453558
125 Ga0209759_1000359 3300025256 Bacteria 58766
126 Ga0209759_1000408 3300025256 Bacteria 52948
127 Ga0209129_1003787 3300025258 Bacteria 6351
128 Ga0209233_1000049 3300025261 Bacteria 453558
129 Ga0209675_1003070 3300025291 Bacteria 8186
130 Ga0209025_1001282 3300025294 Bacteria 34517
131 Ga0209050_1006781 3300025298 Bacteria 6677
132 Ga0209051_1000939 3300025303 Bacteria 28775
133 Ga0207697_10013004 3300025315 Bacteria 3477
134 Ga0207656_10005115 3300025321 Bacteria 4612
135 Ga0207656_10057936 3300025321 Bacteria 1691
136 Ga0207688_10027998 3300025901 Bacteria 3100
137 Ga0207645_10017939 3300025907 Bacteria 4667
138 Ga0207695_10051653 3300025913 Bacteria 4313
139 Ga0207660_10008905 3300025917 Bacteria 6490
140 Ga0207657_10029254 3300025919 Bacteria 5016
141 Ga0207652_10008692 3300025921 Bacteria 8178
142 Ga0207681_10017416 3300025923 Bacteria 4511
143 Ga0207681_10018167 3300025923 Bacteria 4428
144 Ga0207659_10012462 3300025926 Bacteria 5412
145 Ga0207690_10029830 3300025932 Bacteria 3472
146 Ga0207706_10006738 3300025933 Bacteria 10621
147 Ga0207709_10031814 3300025935 Bacteria 3085
148 Ga0207691_10044923 3300025940 Bacteria 4064
149 Ga0207711_10039523 3300025941 Bacteria 4014
150 Ga0207689_10021544 3300025942 Bacteria 5419
151 Ga0207689_10100574 3300025942 Bacteria 2375
152 Ga0207679_10011260 3300025945 Bacteria 5782
153 Ga0207679_10016624 3300025945 Bacteria 4888
154 Ga0207667_10035336 3300025949 Bacteria 5361
155 Ga0207667_10121516 3300025949 Bacteria 2691
156 Ga0207651_10061044 3300025960 Bacteria 2620
157 Ga0207668_10032359 3300025972 Bacteria 3455
158 Ga0207640_10015613 3300025981 Bacteria 4401
159 Ga0207640_10057543 3300025981 Bacteria 2558
160 Ga0207677_10078770 3300026023 Bacteria 2354
161 Ga0207703_10040739 3300026035 Bacteria 3719
162 Ga0207703_10049768 3300026035 Bacteria 3388
163 Ga0207703_10158112 3300026035 Bacteria 1983
164 Ga0207639_10011871 3300026041 Bacteria 6059
165 Ga0207639_10042561 3300026041 Bacteria 3404
166 Ga0207678_10038163 3300026067 Bacteria 4175
167 Ga0207678_10152512 3300026067 Bacteria 1973
168 Ga0207708_10027111 3300026075 Bacteria 4338
169 Ga0207702_10035001 3300026078 Bacteria 4200
170 Ga0207702_10142484 3300026078 Bacteria 2171
171 Ga0207648_10000823 3300026089 Bacteria 35061
172 Ga0207674_10135865 3300026116 Bacteria 2421
173 Ga0207675_100002092 3300026118 Bacteria 19820
174 Ga0207675_100007218 3300026118 Bacteria 10496
175 Ga0207698_10004559 3300026142 Bacteria 8457
176 Ga0207698_10019599 3300026142 Bacteria 4635
177 Ga0207698_10049779 3300026142 Bacteria 3192
178 Ga0209971_1000709 3300027682 Bacteria 8579
179 Ga0209966_1000009 3300027695 Bacteria 86456
180 Ga0209974_10015705 3300027876 Bacteria 2514
181 Ga0268265_10098692 3300028380 Bacteria 2353
182 Ga0268264_10003786 3300028381 Bacteria 12976
183 Ga0268264_10070617 3300028381 Bacteria 2956
184 Ga0307515_10000084 3300028794 Bacteria 221434
185 Ga0265330_10000022 3300031235 Bacteria 154198
186 Ga0265332_10000001 3300031238 Bacteria 863783
187 Ga0265325_10010752 3300031241 Bacteria 5282
188 Ga0265340_10016603 3300031247 Bacteria 3811
189 Ga0307513_10000020 3300031456 Bacteria 228745
190 Ga0307513_10076718 3300031456 Bacteria 3464
191 Ga0307408_100000663 3300031548 Bacteria 28685
192 Ga0307408_100071286 3300031548 Bacteria 2569
193 Ga0307514_10000319 3300031649 Bacteria 115327
194 Ga0265314_10000013 3300031711 Bacteria 403405
195 Ga0307405_10029107 3300031731 Bacteria 3225
196 Ga0307405_10090463 3300031731 Bacteria 2025
197 Ga0307410_10128905 3300031852 Bacteria 1856
198 Ga0307406_10000930 3300031901 Bacteria 16340
199 Ga0307406_10005377 3300031901 Bacteria 7011
200 Ga0307416_100043839 3300032002 Bacteria 3507
201 Ga0307414_10058575 3300032004 Bacteria 2715
202 Ga0307411_10051826 3300032005 Bacteria 2680
203 Ga0373931_0005600 3300035691 Bacteria 5824
204 Ga0373931_0036574 3300035691 Bacteria 2560
205 Ga0395900_0021408 3300037418 Bacteria 6610
206 Ga0395905_0005402 3300037471 Bacteria 13057
207 Ga0395905_0061076 3300037471 Bacteria 3524
208 Ga0395905_0092336 3300037471 Bacteria 2839
209 Ga0439437_001666 3300042000 Bacteria 2353
210 Ga0439432_018784 3300042006 Bacteria 2306
211 Ga0439449_0000371 3300042007 Bacteria 16522
212 Ga0439449_0003457 3300042007 Bacteria 6146
213 Ga0450890_002208 3300042127 Bacteria 2706
214 Ga0439460_0004560 3300042461 Bacteria 3381
215 Ga0451577_0062151 3300042876 Bacteria 3330
216 Ga0451577_0157335 3300042876 Bacteria 2045
217 Ga0453683_0001628 3300044673 Bacteria 18851
218 Ga0453684_0001396 3300044712 Bacteria 69884
219 Ga0453684_0107133 3300044712 Bacteria 3404
220 Ga0466970_0001713 3300044765 Bacteria 10550
221 Ga0466959_0010305 3300045049 Bacteria 6676
222 Ga0451576_0007448 3300045051 Bacteria 13076
223 Ga0451576_0180073 3300045051 Bacteria 2207
224 Ga0466967_0252308 3300045976 Bacteria 1686
225 Ga0495627_001931 3300046453 Bacteria 10817
226 Ga0495638_0007113 3300046460 Bacteria 8071
227 Ga0495651_0065697 3300046462 Bacteria 2769
228 Ga0495653_0021576 3300046463 Bacteria 5217
229 Ga0495616_0004574 3300046513 Bacteria 8705
230 Ga0495628_0023448 3300046516 Bacteria 5066
231 Ga0495631_0000387 3300046518 Bacteria 30358
232 Ga0495637_0002246 3300046520 Bacteria 10732
233 Ga0495652_0025459 3300046529 Bacteria 5234
234 Ga0495652_0057441 3300046529 Bacteria 3299
235 Ga0495621_0001335 3300046539 Bacteria 6378
236 Ga0495621_0004895 3300046539 Bacteria 3804
237 Ga0495621_0026393 3300046539 Bacteria 1959
238 Ga0495645_0012984 3300046543 Bacteria 5879
239 Ga0495625_0040696 3300046660 Bacteria 3386
240 Ga0495646_0004212 3300046680 Bacteria 9044
241 Ga0495646_0006628 3300046680 Bacteria 7344
242 Ga0495624_0025633 3300046690 Bacteria 3871
243 Ga0495600_0006362 3300046809 Bacteria 7184
244 Ga0495604_0037635 3300047317 Bacteria 3809
245 Ga0495593_0009677 3300047673 Bacteria 5593
246 Ga0495602_0023047 3300048088 Bacteria 6076
247 Ga0495614_0004375 3300048089 Bacteria 6368
248 Ga0496101_0006091 3300048904 Bacteria 7746
249 Ga0496104_0018696 3300048907 Bacteria 6326
250 Ga0496106_0075392 3300048909 Bacteria 2583
251 Ga0496107_0006693 3300048910 Bacteria 7935
252 Ga0496108_0014485 3300048911 Bacteria 6438
253 Ga0496109_0169972 3300048912 Bacteria 2045
254 Ga0496110_0017986 3300048913 Bacteria 5920
255 Ga0496111_0015156 3300048914 Bacteria 5284
256 Ga0496112_0233363 3300048915 Bacteria 1794
257 Ga0496113_0181105 3300048916 Bacteria 1670
258 Ga0496115_0060893 3300048918 Bacteria 3042
259 Ga0496121_0016764 3300048924 Bacteria 7537
260 Ga0496123_0059932 3300048926 Bacteria 2457
261 Ga0496125_0001069 3300048928 Bacteria 42296
262 Ga0501034_0040629 3300049571 Bacteria 4708
263 Ga0501198_000001 3300049649 Bacteria 234552
264 Ga0501222_000004 3300049662 Bacteria 136139
265 Ga0501266_000343 3300049763 Bacteria 6188
266 Ga0501045_0010310 3300049824 Bacteria 6547
267 nmdc:mga03n38_89899_c1 3300050490 Bacteria 1459
268 nmdc:mga0k408_940_c1 3300050493 Bacteria 15979
269 nmdc:mga07m45_1408_c1 3300050496 Bacteria 11009
270 nmdc:mga07m45_4244_c1 3300050496 Bacteria 7015
271 nmdc:mga07m45_83230_c1 3300050496 Bacteria 1828
272 Ga0500610_0084738 3300053079 Bacteria 1650
273 Ga0500643_008144 3300053087 Bacteria 4148
274 Ga0500651_0000069 3300053093 Bacteria 67505
275 Ga0500571_000059 3300053110 Bacteria 33280
276 Ga0500594_0002701 3300053118 Bacteria 3860
277 Ga0500595_011702 3300053119 Bacteria 3419
278 Ga0500607_001787 3300053121 Bacteria 18576
279 Ga0500618_000710 3300053125 Bacteria 19287
280 Ga0500618_001314 3300053125 Bacteria 11376
281 Ga0500658_0009048 3300053134 Bacteria 3676
282 Ga0500658_0009077 3300053134 Bacteria 3670
283 Ga0500559_0024285 3300053136 Bacteria 2578
284 Ga0500568_0004350 3300053139 Bacteria 7586
285 Ga0500574_002556 3300053141 Bacteria 3023
286 Ga0500619_000722 3300053154 Bacteria 5665
287 Ga0500634_0004520 3300053161 Bacteria 6451
288 Ga0500645_006964 3300053730 Bacteria 3981
289 Ga0500645_014457 3300053730 Bacteria 2513

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053079 Ga0500610_0084738 Ga0500610_0084738_410_1627 304
2 3300050490 nmdc:mga03n38_89899_c1 nmdc:mga03n38_89899_c1_14_1279 328
3 3300005543 Ga0070672_100108424 Ga0070672_1001084241 336
4 3300025923 Ga0207681_10017416 Ga0207681_100174163 336
5 3300046529 Ga0495652_0057441 Ga0495652_0057441_48_1298 336
6 3300046539 Ga0495621_0004895 Ga0495621_0004895_1379_2920 336
7 3300005548 Ga0070665_100013868 Ga0070665_1000138683 353
8 3300005364 Ga0070673_100075375 Ga0070673_1000753751 354
9 3300025960 Ga0207651_10061044 Ga0207651_100610442 354
10 3300046539 Ga0495621_0026393 Ga0495621_0026393_365_1897 361
11 3300003347 JGI26128J50194_1001123 JGI26128J50194_10011231 365
12 3300006048 Ga0075363_100006576 Ga0075363_1000065762 365
13 3300006195 Ga0075366_10004434 Ga0075366_100044343 365
14 3300013104 Ga0157370_10050335 Ga0157370_100503352 365
15 3300014497 Ga0182008_10016324 Ga0182008_100163243 365
16 3300027695 Ga0209966_1000009 Ga0209966_100000967 365
17 3300050496 nmdc:mga07m45_4244_c1 nmdc:mga07m45_4244_c1_3317_4804 365
18 3300042876 Ga0451577_0062151 Ga0451577_0062151_776_2224 366
19 3300006195 Ga0075366_10000297 Ga0075366_100002973 367
20 3300035691 Ga0373931_0036574 Ga0373931_0036574_555_2030 367
21 3300044712 Ga0453684_0107133 Ga0453684_0107133_1148_2599 367
22 3300050493 nmdc:mga0k408_940_c1 nmdc:mga0k408_940_c1_4405_5880 367
23 3300005578 Ga0068854_100026398 Ga0068854_1000263984 368
24 3300014969 Ga0157376_10041143 Ga0157376_100411432 368
25 3300025321 Ga0207656_10057936 Ga0207656_100579361 368
26 3300025945 Ga0207679_10011260 Ga0207679_100112601 368
27 3300025981 Ga0207640_10015613 Ga0207640_100156131 368
28 3300026116 Ga0207674_10135865 Ga0207674_101358652 368
29 3300042007 Ga0439449_0000371 Ga0439449_0000371_544_2043 368
30 3300005338 Ga0068868_100025578 Ga0068868_1000255786 369
31 3300005614 Ga0068856_100083727 Ga0068856_1000837271 369
32 3300031548 Ga0307408_100071286 Ga0307408_1000712861 370
33 3300005564 Ga0070664_100026754 Ga0070664_1000267546 371
34 3300006177 Ga0075362_10003474 Ga0075362_100034741 371
35 3300025303 Ga0209051_1000939 Ga0209051_100093913 371
36 3300025945 Ga0207679_10016624 Ga0207679_100166241 371
37 3300044712 Ga0453684_0001396 Ga0453684_0001396_58586_60115 371
38 3300049824 Ga0501045_0010310 Ga0501045_0010310_4054_5499 371
39 3300006195 Ga0075366_10013042 Ga0075366_100130421 373
40 3300042127 Ga0450890_002208 Ga0450890_002208_1020_2513 373
41 3300048928 Ga0496125_0001069 Ga0496125_0001069_10912_12393 375
42 3300003578 Ga0006562J51391_1008722 Ga0006562J51391_10087226 376
43 3300005328 Ga0070676_10031456 Ga0070676_100314562 376
44 3300005334 Ga0068869_100040929 Ga0068869_1000409292 376
45 3300005338 Ga0068868_100010482 Ga0068868_1000104822 376
46 3300005353 Ga0070669_100013287 Ga0070669_1000132872 376
47 3300005354 Ga0070675_100022460 Ga0070675_1000224602 376
48 3300005366 Ga0070659_100018068 Ga0070659_1000180681 376
49 3300005455 Ga0070663_100023464 Ga0070663_1000234642 376
50 3300005547 Ga0070693_100006191 Ga0070693_1000061911 376
51 3300005615 Ga0070702_100010254 Ga0070702_1000102543 376
52 3300005616 Ga0068852_100052327 Ga0068852_1000523271 376
53 3300005618 Ga0068864_100009307 Ga0068864_1000093072 376
54 3300005719 Ga0068861_100005959 Ga0068861_1000059598 376
55 3300005834 Ga0068851_10014133 Ga0068851_100141334 376
56 3300005842 Ga0068858_100070480 Ga0068858_1000704803 376
57 3300005844 Ga0068862_100113593 Ga0068862_1001135932 376
58 3300006237 Ga0097621_100018364 Ga0097621_1000183642 376
59 3300006353 Ga0075370_10007135 Ga0075370_100071356 376
60 3300006358 Ga0068871_100011880 Ga0068871_1000118806 376
61 3300006871 Ga0075434_100148731 Ga0075434_1001487312 376
62 3300009177 Ga0105248_10069447 Ga0105248_100694472 376
63 3300010375 Ga0105239_10145976 Ga0105239_101459762 376
64 3300013100 Ga0157373_10012697 Ga0157373_100126976 376
65 3300013296 Ga0157374_10132131 Ga0157374_101321312 376
66 3300014745 Ga0157377_10001941 Ga0157377_1000194110 376
67 3300014968 Ga0157379_10013752 Ga0157379_100137522 376
68 3300017792 Ga0163161_10014761 Ga0163161_100147612 376
69 3300025315 Ga0207697_10013004 Ga0207697_100130042 376
70 3300025321 Ga0207656_10005115 Ga0207656_100051156 376
71 3300025901 Ga0207688_10027998 Ga0207688_100279982 376
72 3300025907 Ga0207645_10017939 Ga0207645_100179392 376
73 3300025923 Ga0207681_10018167 Ga0207681_100181672 376
74 3300025926 Ga0207659_10012462 Ga0207659_100124626 376
75 3300025932 Ga0207690_10029830 Ga0207690_100298302 376
76 3300025933 Ga0207706_10006738 Ga0207706_100067382 376
77 3300025941 Ga0207711_10039523 Ga0207711_100395232 376
78 3300025942 Ga0207689_10021544 Ga0207689_100215444 376
79 3300025949 Ga0207667_10121516 Ga0207667_101215162 376
80 3300025972 Ga0207668_10032359 Ga0207668_100323592 376
81 3300025981 Ga0207640_10057543 Ga0207640_100575431 376
82 3300026023 Ga0207677_10078770 Ga0207677_100787701 376
83 3300026035 Ga0207703_10049768 Ga0207703_100497681 376
84 3300026041 Ga0207639_10011871 Ga0207639_100118712 376
85 3300026067 Ga0207678_10038163 Ga0207678_100381632 376
86 3300026078 Ga0207702_10142484 Ga0207702_101424841 376
87 3300026118 Ga0207675_100007218 Ga0207675_1000072182 376
88 3300026142 Ga0207698_10004559 Ga0207698_100045593 376
89 3300028380 Ga0268265_10098692 Ga0268265_100986922 376
90 3300028381 Ga0268264_10070617 Ga0268264_100706172 376
91 3300035691 Ga0373931_0005600 Ga0373931_0005600_4382_5785 376
92 3300050496 nmdc:mga07m45_83230_c1 nmdc:mga07m45_83230_c1_80_1570 376
93 3300003544 Ga0007417J51691_1026024 Ga0007417J51691_10260245 378
94 3300003575 Ga0007409J51694_1006362 Ga0007409J51694_100636213 378
95 3300003577 Ga0007416J51690_1012585 Ga0007416J51690_101258511 378
96 3300003693 Ga0032354_1023937 Ga0032354_10239379 378
97 3300042461 Ga0439460_0004560 Ga0439460_0004560_492_2021 379
98 3300005718 Ga0068866_10003468 Ga0068866_100034685 380
99 3300032004 Ga0307414_10058575 Ga0307414_100585752 381
100 3300006846 Ga0075430_100037904 Ga0075430_1000379045 382
101 3300014497 Ga0182008_10010917 Ga0182008_100109174 382
102 3300025291 Ga0209675_1003070 Ga0209675_10030705 382
103 3300025298 Ga0209050_1006781 Ga0209050_10067812 382
104 3300048926 Ga0496123_0059932 Ga0496123_0059932_557_2038 382
105 3300053121 Ga0500607_001787 Ga0500607_001787_4125_5609 382
106 3300003187 JGI25151J46595_10004745 JGI25151J46595_100047452 383
107 3300005844 Ga0068862_100105190 Ga0068862_1001051902 383
108 3300006195 Ga0075366_10058128 Ga0075366_100581281 383
109 3300006353 Ga0075370_10010031 Ga0075370_100100315 383
110 3300009148 Ga0105243_10024963 Ga0105243_100249635 383
111 3300025258 Ga0209129_1003787 Ga0209129_10037872 383
112 3300025294 Ga0209025_1001282 Ga0209025_100128221 383
113 3300046453 Ga0495627_001931 Ga0495627_001931_4347_5834 383
114 3300046520 Ga0495637_0002246 Ga0495637_0002246_4572_6053 383
115 3300050496 nmdc:mga07m45_1408_c1 nmdc:mga07m45_1408_c1_474_1961 383
116 3300053161 Ga0500634_0004520 Ga0500634_0004520_834_2333 383
117 3300005328 Ga0070676_10045488 Ga0070676_100454881 384
118 3300005334 Ga0068869_100091354 Ga0068869_1000913541 384
119 3300005459 Ga0068867_100000860 Ga0068867_10000086018 384
120 3300005842 Ga0068858_100105658 Ga0068858_1001056582 384
121 3300005843 Ga0068860_100037343 Ga0068860_1000373431 384
122 3300005844 Ga0068862_100032593 Ga0068862_1000325933 384
123 3300013297 Ga0157378_10011412 Ga0157378_100114122 384
124 3300017792 Ga0163161_10021977 Ga0163161_100219772 384
125 3300025935 Ga0207709_10031814 Ga0207709_100318142 384
126 3300025942 Ga0207689_10100574 Ga0207689_101005741 384
127 3300026035 Ga0207703_10158112 Ga0207703_101581121 384
128 3300026089 Ga0207648_10000823 Ga0207648_1000082315 384
129 3300028381 Ga0268264_10003786 Ga0268264_100037865 384
130 3300031852 Ga0307410_10128905 Ga0307410_101289051 384
131 3300042000 Ga0439437_001666 Ga0439437_001666_680_2149 384
132 3300049649 Ga0501198_000001 Ga0501198_000001_142989_144470 384
133 3300049662 Ga0501222_000004 Ga0501222_000004_131965_133446 384
134 3300006195 Ga0075366_10004646 Ga0075366_100046466 385
135 3300053125 Ga0500618_000710 Ga0500618_000710_9656_11140 385
136 3300053730 Ga0500645_006964 Ga0500645_006964_494_1984 385
137 3300053730 Ga0500645_014457 Ga0500645_014457_533_2023 385
138 3300005339 Ga0070660_100010793 Ga0070660_1000107936 386
139 3300005563 Ga0068855_100013899 Ga0068855_1000138995 386
140 3300025913 Ga0207695_10051653 Ga0207695_100516534 386
141 3300025919 Ga0207657_10029254 Ga0207657_100292542 386
142 3300031456 Ga0307513_10000020 Ga0307513_100000202 386
143 3300048912 Ga0496109_0169972 Ga0496109_0169972_195_1724 386
144 3300005329 Ga0070683_100121450 Ga0070683_1001214501 387
145 3300005339 Ga0070660_100160125 Ga0070660_1001601251 387
146 3300005344 Ga0070661_100048366 Ga0070661_1000483663 387
147 3300005366 Ga0070659_100068687 Ga0070659_1000686871 387
148 3300005577 Ga0068857_100106951 Ga0068857_1001069511 387
149 3300005834 Ga0068851_10034199 Ga0068851_100341992 387
150 3300013100 Ga0157373_10042265 Ga0157373_100422653 387
151 3300013105 Ga0157369_10104962 Ga0157369_101049621 387
152 3300026041 Ga0207639_10042561 Ga0207639_100425613 387
153 3300042006 Ga0439432_018784 Ga0439432_018784_367_1848 387
154 3300042007 Ga0439449_0003457 Ga0439449_0003457_2959_4440 387
155 3300042876 Ga0451577_0157335 Ga0451577_0157335_137_1624 387
156 3300047673 Ga0495593_0009677 Ga0495593_0009677_3260_4741 387
157 3300048089 Ga0495614_0004375 Ga0495614_0004375_1853_3334 387
158 3300053087 Ga0500643_008144 Ga0500643_008144_18_1499 387
159 3300053093 Ga0500651_0000069 Ga0500651_0000069_17333_18814 387
160 3300053110 Ga0500571_000059 Ga0500571_000059_16689_18170 387
161 3300053134 Ga0500658_0009077 Ga0500658_0009077_274_1755 387
162 3300009553 Ga0105249_10090868 Ga0105249_100908682 388
163 3300013306 Ga0163162_10009022 Ga0163162_100090222 388
164 3300014969 Ga0157376_10015559 Ga0157376_100155592 388
165 3300027682 Ga0209971_1000709 Ga0209971_10007099 388
166 3300027876 Ga0209974_10015705 Ga0209974_100157051 388
167 3300046460 Ga0495638_0007113 Ga0495638_0007113_1718_3199 388
168 3300046513 Ga0495616_0004574 Ga0495616_0004574_5202_6683 388
169 3300046518 Ga0495631_0000387 Ga0495631_0000387_12735_14216 388
170 3300046539 Ga0495621_0001335 Ga0495621_0001335_1703_3184 388
171 3300046660 Ga0495625_0040696 Ga0495625_0040696_1731_3212 388
172 3300048904 Ga0496101_0006091 Ga0496101_0006091_1541_3001 388
173 3300048907 Ga0496104_0018696 Ga0496104_0018696_3057_4517 388
174 3300048909 Ga0496106_0075392 Ga0496106_0075392_225_1685 388
175 3300048910 Ga0496107_0006693 Ga0496107_0006693_3919_5379 388
176 3300048911 Ga0496108_0014485 Ga0496108_0014485_19_1479 388
177 3300048913 Ga0496110_0017986 Ga0496110_0017986_817_2277 388
178 3300048914 Ga0496111_0015156 Ga0496111_0015156_2259_3719 388
179 3300048915 Ga0496112_0233363 Ga0496112_0233363_27_1487 388
180 3300048916 Ga0496113_0181105 Ga0496113_0181105_176_1636 388
181 3300048918 Ga0496115_0060893 Ga0496115_0060893_747_2207 388
182 3300053118 Ga0500594_0002701 Ga0500594_0002701_1893_3374 388
183 3300053134 Ga0500658_0009048 Ga0500658_0009048_274_1755 388
184 3300053136 Ga0500559_0024285 Ga0500559_0024285_457_1938 388
185 3300053139 Ga0500568_0004350 Ga0500568_0004350_2913_4394 388
186 3300003214 JGI25165J46597_1000022 JGI25165J46597_1000022257 389
187 3300003751 Ga0055538_1000011 Ga0055538_1000011100 389
188 3300003752 Ga0055539_1000016 Ga0055539_1000016257 389
189 3300003756 Ga0055533_1000019 Ga0055533_1000019257 389
190 3300003759 Ga0055525_1000042 Ga0055525_1000042101 389
191 3300003841 Ga0055541_1000017 Ga0055541_1000017192 389
192 3300005441 Ga0070700_100009304 Ga0070700_1000093042 389
193 3300025224 Ga0209784_100019 Ga0209784_100019334 389
194 3300025225 Ga0209566_100017 Ga0209566_100017334 389
195 3300025226 Ga0209674_100031 Ga0209674_100031334 389
196 3300025230 Ga0209563_100035 Ga0209563_100035334 389
197 3300025233 Ga0209437_100038 Ga0209437_100038334 389
198 3300025253 Ga0209677_100020 Ga0209677_100020334 389
199 3300025261 Ga0209233_1000049 Ga0209233_1000049334 389
200 3300026067 Ga0207678_10152512 Ga0207678_101525122 389
201 3300026075 Ga0207708_10027111 Ga0207708_100271112 389
202 3300026078 Ga0207702_10035001 Ga0207702_100350013 389
203 3300026118 Ga0207675_100002092 Ga0207675_10000209214 389
204 3300045051 Ga0451576_0007448 Ga0451576_0007448_6211_7707 389
205 3300005548 Ga0070665_100098615 Ga0070665_1000986151 390
206 3300031548 Ga0307408_100000663 Ga0307408_10000066312 390
207 3300031901 Ga0307406_10000930 Ga0307406_1000093012 390
208 3300032005 Ga0307411_10051826 Ga0307411_100518261 390
209 3300045976 Ga0466967_0252308 Ga0466967_0252308_134_1660 390
210 3300049571 Ga0501034_0040629 Ga0501034_0040629_2368_3891 390
211 3300049763 Ga0501266_000343 Ga0501266_000343_4323_5789 391
212 3300005343 Ga0070687_100027852 Ga0070687_1000278522 392
213 3300005366 Ga0070659_100034576 Ga0070659_1000345764 392
214 3300005367 Ga0070667_100110737 Ga0070667_1001107372 392
215 3300005458 Ga0070681_10053501 Ga0070681_100535011 392
216 3300005530 Ga0070679_100117842 Ga0070679_1001178422 392
217 3300005543 Ga0070672_100034460 Ga0070672_1000344602 392
218 3300005616 Ga0068852_100044771 Ga0068852_1000447712 392
219 3300005842 Ga0068858_100029993 Ga0068858_1000299936 392
220 3300005843 Ga0068860_100046096 Ga0068860_1000460962 392
221 3300013308 Ga0157375_10065289 Ga0157375_100652892 392
222 3300014326 Ga0157380_10037532 Ga0157380_100375322 392
223 3300014968 Ga0157379_10017500 Ga0157379_100175002 392
224 3300025917 Ga0207660_10008905 Ga0207660_100089054 392
225 3300025921 Ga0207652_10008692 Ga0207652_100086921 392
226 3300025940 Ga0207691_10044923 Ga0207691_100449232 392
227 3300026035 Ga0207703_10040739 Ga0207703_100407392 392
228 3300026142 Ga0207698_10019599 Ga0207698_100195996 392
229 3300031731 Ga0307405_10029107 Ga0307405_100291072 392
230 3300031901 Ga0307406_10005377 Ga0307406_100053772 392
231 3300032002 Ga0307416_100043839 Ga0307416_1000438392 392
232 3300045051 Ga0451576_0180073 Ga0451576_0180073_392_1849 392
233 3300028794 Ga0307515_10000084 Ga0307515_10000084113 393
234 3300031456 Ga0307513_10076718 Ga0307513_100767183 393
235 3300031649 Ga0307514_10000319 Ga0307514_1000031949 393
236 iso_pu_bacteria 2904449895 2904450521 394
237 iso_pu_bacteria 2904456579 2904456655 394
238 iso_pu_bacteria 2928115317 2928115659 394
239 iso_pu_bacteria 8055225921 8055227938 394
240 3300031731 Ga0307405_10090463 Ga0307405_100904632 395
241 3300005577 Ga0068857_100234980 Ga0068857_1002349801 396
242 3300031235 Ga0265330_10000022 Ga0265330_1000002290 396
243 3300031238 Ga0265332_10000001 Ga0265332_10000001599 396
244 3300031241 Ga0265325_10010752 Ga0265325_100107526 396
245 3300031247 Ga0265340_10016603 Ga0265340_100166032 396
246 3300031711 Ga0265314_10000013 Ga0265314_10000013218 396
247 iso_pu_bacteria 2974320154 2974322555 396
248 3300009093 Ga0105240_10010634 Ga0105240_100106346 397
249 3300009551 Ga0105238_10025649 Ga0105238_100256496 397
250 3300037418 Ga0395900_0021408 Ga0395900_0021408_3947_5500 397
251 iso_pu_bacteria 2881101125 2881105467 397
252 iso_pu_bacteria 2929520902 2929521236 397
253 3300005563 Ga0068855_100057182 Ga0068855_1000571822 398
254 3300009177 Ga0105248_10000563 Ga0105248_1000056337 398
255 3300025949 Ga0207667_10035336 Ga0207667_100353363 398
256 iso_pu_bacteria 2954767861 2954768621 399
257 3300002737 JGI25162J39368_1000036 JGI25162J39368_1000036101 400
258 3300025231 Ga0207427_100255 Ga0207427_10025528 400
259 3300037471 Ga0395905_0092336 Ga0395905_0092336_821_2308 401
260 3300044673 Ga0453683_0001628 Ga0453683_0001628_5189_6676 401
261 3300046462 Ga0495651_0065697 Ga0495651_0065697_461_1915 401
262 3300053154 Ga0500619_000722 Ga0500619_000722_643_2097 401
263 iso_pu_bacteria 2643221660 2644341008 401
264 3300048924 Ga0496121_0016764 Ga0496121_0016764_3517_5016 404
265 iso_pu_bacteria 2643221603 2644030678 407
266 iso_pu_bacteria 2818991436 2819542536 408
267 3300037471 Ga0395905_0005402 Ga0395905_0005402_10857_12341 410
268 3300037471 Ga0395905_0061076 Ga0395905_0061076_1784_3256 410
269 3300044765 Ga0466970_0001713 Ga0466970_0001713_8856_10331 410
270 3300045049 Ga0466959_0010305 Ga0466959_0010305_3762_5237 410
271 3300015262 Ga0182007_10008751 Ga0182007_100087513 411
272 3300015265 Ga0182005_1001336 Ga0182005_10013363 411
273 iso_pu_bacteria 2548876994 2550693938 411
274 iso_pu_bacteria 2818991445 2819591185 411
275 iso_pu_bacteria 2884811622 2884812303 411
276 iso_pu_bacteria 2884836552 2884836910 411
277 iso_pu_bacteria 2884852848 2884853201 411
278 iso_pu_bacteria 2896154374 2896155681 411
279 3300046463 Ga0495653_0021576 Ga0495653_0021576_3713_5200 412
280 3300046516 Ga0495628_0023448 Ga0495628_0023448_2250_3737 412
281 3300046529 Ga0495652_0025459 Ga0495652_0025459_1135_2625 412
282 3300046543 Ga0495645_0012984 Ga0495645_0012984_3533_5023 412
283 3300046680 Ga0495646_0004212 Ga0495646_0004212_4484_5974 412
284 3300046680 Ga0495646_0006628 Ga0495646_0006628_3278_4765 412
285 3300046690 Ga0495624_0025633 Ga0495624_0025633_494_1981 412
286 3300046809 Ga0495600_0006362 Ga0495600_0006362_4899_6386 412
287 3300047317 Ga0495604_0037635 Ga0495604_0037635_1808_3295 412
288 3300048088 Ga0495602_0023047 Ga0495602_0023047_2251_3738 412
289 3300053119 Ga0500595_011702 Ga0500595_011702_976_2463 412
290 3300053141 Ga0500574_002556 Ga0500574_002556_172_1659 412
291 3300053125 Ga0500618_001314 Ga0500618_001314_5891_7384 413
292 3300002704 JGI25155J39150_1000281 JGI25155J39150_100028114 415
293 3300002704 JGI25155J39150_1000292 JGI25155J39150_10002926 415
294 3300002738 JGI25154J39366_1000256 JGI25154J39366_100025635 415
295 3300002738 JGI25154J39366_1000594 JGI25154J39366_10005946 415
296 3300002741 JGI25157J39369_1000233 JGI25157J39369_100023342 415
297 3300003758 Ga0055532_1000016 Ga0055532_100001659 415
298 3300005616 Ga0068852_100062718 Ga0068852_1000627183 415
299 3300025206 Ga0209435_100070 Ga0209435_10007059 415
300 3300025229 Ga0209147_100023 Ga0209147_100023385 415
301 3300025242 Ga0209258_100179 Ga0209258_10017979 415
302 3300025246 Ga0209646_1000033 Ga0209646_1000033366 415
303 3300025250 Ga0209026_1000150 Ga0209026_100015059 415
304 3300025256 Ga0209759_1000359 Ga0209759_100035911 415
305 3300025256 Ga0209759_1000408 Ga0209759_100040848 415
306 3300026142 Ga0207698_10049779 Ga0207698_100497793 415

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13365

Trypsin_2

Trypsin-like peptidase domain

127

258

0.98

PF13180

PDZ_2

PDZ domain

297

388

0.96

PF00595

PDZ

PDZ domain

287

376

0.9

PF17820

PDZ_6

PDZ domain

323

376

0.82

PF17820

PDZ_6

PDZ domain

437

491

0.79

PF00595

PDZ

PDZ domain

411

489

0.78

PF00089

Trypsin

Trypsin

109

285

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nwu-assembly1.cif.gz_A substrate induced remodeling of the active site regulates htra1 activity 0.9444 41 265
3num-assembly1.cif.gz_A substrate induced remodeling of the active site regulates htra1 activity 0.9383 41 270
3tjn-assembly3.cif.gz_D htra1 catalytic domain, apo form 0.9358 41 269
6z0y-assembly1.cif.gz_A htra1 inactive protease domain s328a with carasil mutations d174r r274q 0.9325 41 273
3nwu-assembly1.cif.gz_B substrate induced remodeling of the active site regulates htra1 activity 0.9318 41 265
ID Description Score Start End Superfamily
af_P0C0V0_287_387_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9313 278 370 2.30.42.10
3gdvC03 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9298 278 372 2.30.42.10
2r3yB01 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9296 40 172 2.40.10.10
1ky9A01 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.919 106 161 2.40.10.10
2z9iA03 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9175 278 370 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A1V5E998-F1-model_v4 Putative periplasmic serine endoprotease DegP-like (EC 3.4.21.107) 0.9672 277 371 GO:0004197
GO:0006508
GO:0030313
GO:0042597
AF-A0A2P6W8M2-F1-model_v4 Trypsin 0.9554 41 206 GO:0004252
GO:0006508
AF-A0A7Y6PUX6-F1-model_v4 PDZ domain-containing protein 0.948 278 370
AF-A3SHR8-F1-model_v4 Protease DegQ 0.9375 276 372 GO:0006508
GO:0008233
GO:0016020
AF-A0A534NAI2-F1-model_v4 PDZ domain-containing protein 0.927 269 373 GO:0030313
GO:0042597

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pLDDT pTM Quality
74.42 0.65 Medium
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Predicted Structure (AlphaFold2)

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