F398454

General Info

Members Datasets Scaffolds Average Seq Length
306 205 612 323

Family's Representative Sequence

Representative Sequence 3300003792|Ga0055540_1012484|Ga0055540_10124842
Length 355
Sequence MLRRATVPRHRKSDVDVSPSRNGYADAMTVIGFHCSHEQISPAQLLRDVQHAERAGFTAGMSSDHLSPWSTRQNESGFAWSFLGAALATTELPFGVVNAPGQRYHPAIIAQAIATLAQMFPGRFWAALGSGEASNERVTGQEWPRKEVRDRRLVECVDVIRRLLKGEEVSHDGLVQVNRAQLWTLPDRVPDLVGPAVTEATAARHAAWADGLITVNQPAETLRRVLDAYRGAGGRGPARLQIHLSWAPTDEEAISVACDQWRTNVFGPPVAWDLESVEAFDVIGRHVTPEQVRSSVRVSSELGQHAQWLAEYVEQGWDELYLHFVGQQQSAFIDAFGEHVLPQLSPTAPATAVMA

Samples

Sample ID Description Type Environment
1 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
39 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
49 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
76 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
77 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
78 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
79 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
80 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
81 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
82 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
85 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
86 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
87 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
94 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
95 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
100 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
101 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
102 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
103 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
104 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
105 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
106 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
107 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
108 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
109 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
110 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
111 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
112 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
113 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
114 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
115 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
116 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
117 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
124 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
125 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
126 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
154 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
163 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
166 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
169 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
170 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
171 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
172 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
173 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
174 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
175 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
179 2643221546 Microbacterium sp. Root53 Isolate Unclassified
180 2643221641 Nocardioides sp. Root122 Isolate Unclassified
181 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
182 2643221711 Terrabacter sp. Root85 Isolate Unclassified
183 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
184 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
185 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
186 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
187 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
188 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
189 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
190 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
191 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
192 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
193 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
194 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
195 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
196 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
197 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
198 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
199 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
200 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
201 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
202 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
203 8002775197 Frankia nepalensis CN7 Isolate Nodule
204 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
205 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.18
Metatranscriptomes 0
Isolates 8.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.52
Nodule 0.98
Rhizoplane 11.44
Rhizosphere 72.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055540_1012484 3300003792 Bacteria 2663
2 rootL2_10076769 3300003322 Bacteria 1368
3 rootL2_10085567 3300003322 Bacteria 10845
4 JGI25407J50210_10007697 3300003373 Bacteria 2703
5 Ga0070683_100054848 3300005329 Bacteria 3696
6 Ga0068868_100080127 3300005338 Bacteria 2616
7 Ga0070671_100009334 3300005355 Bacteria 7877
8 Ga0070659_100182059 3300005366 Bacteria 1725
9 Ga0070667_100105132 3300005367 Bacteria 2443
10 Ga0070710_10001017 3300005437 Bacteria 13296
11 Ga0070663_100034181 3300005455 Bacteria 3519
12 Ga0070663_100058302 3300005455 Bacteria 2772
13 Ga0070663_100212741 3300005455 Bacteria 1514
14 Ga0070678_100190637 3300005456 Bacteria 1685
15 Ga0070678_100222239 3300005456 Bacteria 1570
16 Ga0070684_100365025 3300005535 Bacteria 1329
17 Ga0068853_100017988 3300005539 Bacteria 5842
18 Ga0068853_100388836 3300005539 Bacteria 1304
19 Ga0070665_100135653 3300005548 Bacteria 2463
20 Ga0068864_100080415 3300005618 Bacteria 2855
21 Ga0068866_10255029 3300005718 Bacteria 1075
22 Ga0068861_100155635 3300005719 Bacteria 1880
23 Ga0068863_100178782 3300005841 Bacteria 2037
24 Ga0068860_100016209 3300005843 Bacteria 7268
25 Ga0068860_100310969 3300005843 Bacteria 1545
26 Ga0081455_10010445 3300005937 Bacteria 9422
27 Ga0081455_10023854 3300005937 Bacteria 5682
28 Ga0081455_10060543 3300005937 Bacteria 3191
29 Ga0081539_10037211 3300005985 Bacteria 2901
30 Ga0075365_10003040 3300006038 Bacteria 8510
31 Ga0075368_10041834 3300006042 Bacteria 1801
32 Ga0075363_100039881 3300006048 Bacteria 2474
33 Ga0075363_100046510 3300006048 Bacteria 2302
34 Ga0075364_10036687 3300006051 Bacteria 3170
35 Ga0075364_10052306 3300006051 Bacteria 2669
36 Ga0075364_10154145 3300006051 Bacteria 1549
37 Ga0075432_10030384 3300006058 Bacteria 1867
38 Ga0070716_100284531 3300006173 Bacteria 1142
39 Ga0075369_10001854 3300006186 Bacteria 7379
40 Ga0075369_10025319 3300006186 Bacteria 2466
41 Ga0075428_100011287 3300006844 Bacteria 9937
42 Ga0075428_100148876 3300006844 Bacteria 2543
43 Ga0075428_100341491 3300006844 Bacteria 1608
44 Ga0075430_100005407 3300006846 Bacteria 10788
45 Ga0068865_100069484 3300006881 Bacteria 2492
46 Ga0097620_100193452 3300006931 Bacteria 2118
47 Ga0105245_10224022 3300009098 Bacteria 1816
48 Ga0105247_10036682 3300009101 Bacteria 2988
49 Ga0105247_10213246 3300009101 Bacteria 1303
50 Ga0114129_10039072 3300009147 Bacteria 6691
51 Ga0114129_10338781 3300009147 Bacteria 1995
52 Ga0105243_10083001 3300009148 Bacteria 2620
53 Ga0105249_10094590 3300009553 Bacteria 2801
54 Ga0105030_101000 3300009987 Bacteria 2516
55 Ga0105028_102671 3300009993 Bacteria 1871
56 Ga0157370_10248951 3300013104 Bacteria 1644
57 Ga0157369_10609923 3300013105 Bacteria 1126
58 Ga0171462_1004 3300013250 Bacteria 678877
59 Ga0163162_10147664 3300013306 Bacteria 2468
60 Ga0163162_10590870 3300013306 Bacteria 1237
61 Ga0157375_10131640 3300013308 Bacteria 2621
62 Ga0157375_10417727 3300013308 Bacteria 1507
63 Ga0157380_10007750 3300014326 Bacteria 7643
64 Ga0157380_10023224 3300014326 Bacteria 4676
65 Ga0157380_10251621 3300014326 Bacteria 1599
66 Ga0157376_10689154 3300014969 Bacteria 1026
67 Ga0163161_10046466 3300017792 Bacteria 3132
68 Ga0163161_10250816 3300017792 Bacteria 1380
69 Ga0209646_1000167 3300025246 Bacteria 87036
70 Ga0209051_1004261 3300025303 Bacteria 8900
71 Ga0207692_10001493 3300025898 Bacteria 8774
72 Ga0207710_10036212 3300025900 Bacteria 2174
73 Ga0207688_10051411 3300025901 Bacteria 2308
74 Ga0207680_10058331 3300025903 Bacteria 2339
75 Ga0207645_10047081 3300025907 Bacteria 2754
76 Ga0207643_10007297 3300025908 Bacteria 5931
77 Ga0207654_10100878 3300025911 Bacteria 1778
78 Ga0207644_10001495 3300025931 Bacteria 15053
79 Ga0207669_10115631 3300025937 Bacteria 1809
80 Ga0207711_10032446 3300025941 Bacteria 4415
81 Ga0207689_10384079 3300025942 Bacteria 1169
82 Ga0207689_10397680 3300025942 Bacteria 1148
83 Ga0207668_10423724 3300025972 Bacteria 1130
84 Ga0207658_10122018 3300025986 Bacteria 2079
85 Ga0207677_10400541 3300026023 Bacteria 1164
86 Ga0207639_10033296 3300026041 Bacteria 3801
87 Ga0207639_10048654 3300026041 Bacteria 3211
88 Ga0207678_10010331 3300026067 Bacteria 8193
89 Ga0207678_10032509 3300026067 Bacteria 4546
90 Ga0207678_10093999 3300026067 Bacteria 2561
91 Ga0207678_10259280 3300026067 Bacteria 1490
92 Ga0207702_10130310 3300026078 Bacteria 2262
93 Ga0207641_10174844 3300026088 Bacteria 1963
94 Ga0207648_10070231 3300026089 Bacteria 3053
95 Ga0207676_10076841 3300026095 Bacteria 2699
96 Ga0207675_100088909 3300026118 Bacteria 2902
97 Ga0207675_100122103 3300026118 Bacteria 2465
98 Ga0207675_100199208 3300026118 Bacteria 1923
99 Ga0207683_10062432 3300026121 Bacteria 3281
100 Ga0207683_10075620 3300026121 Bacteria 2981
101 Ga0207683_10106302 3300026121 Bacteria 2510
102 Ga0207683_10134409 3300026121 Bacteria 2226
103 Ga0268266_10009116 3300028379 Bacteria 8758
104 Ga0268266_10042497 3300028379 Bacteria 3882
105 Ga0268264_10007529 3300028381 Bacteria 9083
106 Ga0307515_10000227 3300028794 Bacteria 139393
107 Ga0316177_1184132 3300030731 Bacteria 2432
108 Ga0314311_1088219 3300030733 Bacteria 7739
109 Ga0316575_10007582 3300031665 Bacteria 3929
110 Ga0316576_10023375 3300031727 Bacteria 4304
111 Ga0316578_10005887 3300031728 Bacteria 5997
112 Ga0307516_10000441 3300031730 Bacteria 54683
113 Ga0307405_10028778 3300031731 Bacteria 3240
114 Ga0307405_10138079 3300031731 Bacteria 1695
115 Ga0307405_10302870 3300031731 Bacteria 1213
116 Ga0307405_10382894 3300031731 Bacteria 1096
117 Ga0316577_10133523 3300031733 Bacteria 1397
118 Ga0307413_10020330 3300031824 Bacteria 3529
119 Ga0307413_10037481 3300031824 Bacteria 2801
120 Ga0307413_10144128 3300031824 Bacteria 1650
121 Ga0307410_10036781 3300031852 Bacteria 3191
122 Ga0307410_10053880 3300031852 Bacteria 2724
123 Ga0307410_10409290 3300031852 Bacteria 1098
124 Ga0326468_10001013 3300031889 Bacteria 2678
125 Ga0307406_10015150 3300031901 Bacteria 4455
126 Ga0307406_10049533 3300031901 Bacteria 2658
127 Ga0307406_10059053 3300031901 Bacteria 2467
128 Ga0307406_10251762 3300031901 Bacteria 1331
129 Ga0307407_10019932 3300031903 Bacteria 3423
130 Ga0307407_10056519 3300031903 Bacteria 2273
131 Ga0307407_10153849 3300031903 Bacteria 1498
132 Ga0307409_100025380 3300031995 Bacteria 4156
133 Ga0307409_100167140 3300031995 Bacteria 1932
134 Ga0307409_100207645 3300031995 Bacteria 1757
135 Ga0307409_100425590 3300031995 Bacteria 1275
136 Ga0307409_100503226 3300031995 Bacteria 1180
137 Ga0307416_100074948 3300032002 Bacteria 2829
138 Ga0307416_100212734 3300032002 Bacteria 1846
139 Ga0307416_100338997 3300032002 Bacteria 1515
140 Ga0307416_100526197 3300032002 Bacteria 1251
141 Ga0307414_10012086 3300032004 Bacteria 5094
142 Ga0307414_10050909 3300032004 Bacteria 2872
143 Ga0307414_10063936 3300032004 Bacteria 2617
144 Ga0307414_10164884 3300032004 Bacteria 1765
145 Ga0307414_10196430 3300032004 Bacteria 1637
146 Ga0307411_10018062 3300032005 Bacteria 4037
147 Ga0307411_10120588 3300032005 Bacteria 1896
148 Ga0307415_100090130 3300032126 Bacteria 2217
149 Ga0373931_0239725 3300035691 Bacteria 1099
150 Ga0316582_0008109 3300036647 Bacteria 5625
151 Ga0316584_0029359 3300036712 Bacteria 4058
152 Ga0395900_0396090 3300037418 Bacteria 1346
153 Ga0395898_0137431 3300037466 Bacteria 2340
154 Ga0395901_0190576 3300038443 Bacteria 2150
155 Ga0439461_0002830 3300041410 Bacteria 2808
156 Ga0439466_0011924 3300041411 Bacteria 3210
157 Ga0439465_0002677 3300041413 Bacteria 5825
158 Ga0439465_0003094 3300041413 Bacteria 5440
159 Ga0439431_0002148 3300041997 Bacteria 4349
160 Ga0439431_0003523 3300041997 Bacteria 3451
161 Ga0439433_0009467 3300041999 Bacteria 2123
162 Ga0439442_007477 3300042002 Bacteria 2196
163 Ga0439432_029164 3300042006 Bacteria 1795
164 Ga0439454_019221 3300042011 Bacteria 992
165 Ga0439455_0002831 3300042012 Bacteria 3224
166 Ga0439463_039313 3300042016 Bacteria 1201
167 Ga0450903_009485 3300042138 Bacteria 1585
168 Ga0439434_0006422 3300042435 Bacteria 3433
169 Ga0439434_0008409 3300042435 Bacteria 3024
170 Ga0466972_0038591 3300044658 Bacteria 2332
171 Ga0466965_0003919 3300044683 Bacteria 6585
172 Ga0466966_0116908 3300044684 Bacteria 1641
173 Ga0466968_0001806 3300044735 Bacteria 7727
174 Ga0466960_0014305 3300044901 Bacteria 3393
175 Ga0495582_0153007 3300046473 Bacteria 1310
176 Ga0495686_0001229 3300047472 Bacteria 29267
177 Ga0496100_0003571 3300048903 Bacteria 8128
178 Ga0496100_0010598 3300048903 Bacteria 5222
179 Ga0496101_0001714 3300048904 Bacteria 13127
180 Ga0496101_0009299 3300048904 Bacteria 6454
181 Ga0496102_0002641 3300048905 Bacteria 15224
182 Ga0496102_0059372 3300048905 Bacteria 3498
183 Ga0496103_0000847 3300048906 Bacteria 22384
184 Ga0496104_0000702 3300048907 Bacteria 28778
185 Ga0496104_0051539 3300048907 Bacteria 3884
186 Ga0496104_0055396 3300048907 Bacteria 3749
187 Ga0496104_0079980 3300048907 Bacteria 3115
188 Ga0496105_0008663 3300048908 Bacteria 7911
189 Ga0496105_0008693 3300048908 Bacteria 7901
190 Ga0496105_0105505 3300048908 Bacteria 2326
191 Ga0496105_0131252 3300048908 Bacteria 2065
192 Ga0496105_0241970 3300048908 Bacteria 1464
193 Ga0496106_0296807 3300048909 Bacteria 1295
194 Ga0496107_0043736 3300048910 Bacteria 3218
195 Ga0496108_0000008 3300048911 Bacteria 294619
196 Ga0496108_0039594 3300048911 Bacteria 3928
197 Ga0496108_0168007 3300048911 Bacteria 1897
198 Ga0496108_0246869 3300048911 Bacteria 1553
199 Ga0496109_0018642 3300048912 Bacteria 6099
200 Ga0496109_0030286 3300048912 Bacteria 4851
201 Ga0496109_0106368 3300048912 Bacteria 2606
202 Ga0496109_0209511 3300048912 Bacteria 1833
203 Ga0496110_0002091 3300048913 Bacteria 14889
204 Ga0496110_0026284 3300048913 Bacteria 4979
205 Ga0496110_0175646 3300048913 Bacteria 1944
206 Ga0496112_0002704 3300048915 Bacteria 14341
207 Ga0496113_0119098 3300048916 Bacteria 2063
208 Ga0496113_0163776 3300048916 Bacteria 1759
209 Ga0496114_0008413 3300048917 Bacteria 8172
210 Ga0496114_0054828 3300048917 Bacteria 3324
211 Ga0496115_0016692 3300048918 Bacteria 5596
212 Ga0496119_0000367 3300048922 Bacteria 63280
213 Ga0501031_0005194 3300049568 Bacteria 8489
214 Ga0501031_0088997 3300049568 Bacteria 2013
215 Ga0501033_0010434 3300049570 Bacteria 7125
216 Ga0501033_0165776 3300049570 Bacteria 1588
217 Ga0501034_0311162 3300049571 Bacteria 1509
218 Ga0501036_0005865 3300049572 Bacteria 9949
219 Ga0501036_0033435 3300049572 Bacteria 4350
220 Ga0501036_0142511 3300049572 Bacteria 2022
221 Ga0501036_0169500 3300049572 Bacteria 1839
222 Ga0501037_0033678 3300049573 Bacteria 3783
223 Ga0501038_0018263 3300049574 Bacteria 6331
224 Ga0501038_0258776 3300049574 Bacteria 1376
225 Ga0501039_0000329 3300049575 Bacteria 33853
226 Ga0501040_0022395 3300049576 Bacteria 4227
227 Ga0501040_0145314 3300049576 Bacteria 1672
228 Ga0501041_0004767 3300049577 Bacteria 7873
229 Ga0501042_0003282 3300049578 Bacteria 10123
230 Ga0501042_0102071 3300049578 Bacteria 2063
231 Ga0501042_0179152 3300049578 Bacteria 1529
232 Ga0501043_0147708 3300049579 Bacteria 1840
233 Ga0501043_0393696 3300049579 Bacteria 1047
234 Ga0501046_0004598 3300049580 Bacteria 12462
235 Ga0501047_0187421 3300049581 Bacteria 1933
236 Ga0501048_0019287 3300049582 Bacteria 5006
237 Ga0501048_0134868 3300049582 Bacteria 1745
238 Ga0501068_0143964 3300049584 Bacteria 1495
239 Ga0501068_0203589 3300049584 Bacteria 1255
240 Ga0501069_0065907 3300049585 Bacteria 2025
241 Ga0501070_0003615 3300049586 Bacteria 13345
242 Ga0501070_0168393 3300049586 Bacteria 1805
243 Ga0501071_0016148 3300049587 Bacteria 5132
244 Ga0501071_0114637 3300049587 Bacteria 1994
245 Ga0501072_0176577 3300049588 Bacteria 1704
246 Ga0501075_0001105 3300049591 Bacteria 17380
247 Ga0501077_0053860 3300049593 Bacteria 2554
248 Ga0501079_0014303 3300049741 Bacteria 6050
249 Ga0501081_0000955 3300049743 Bacteria 17196
250 Ga0501081_0257869 3300049743 Bacteria 1274
251 Ga0501083_0021537 3300049744 Bacteria 4477
252 Ga0501035_0196448 3300049822 Bacteria 1733
253 Ga0501045_0101759 3300049824 Bacteria 2127
254 nmdc:mga03n38_24556_c1 3300050490 Bacteria 2465
255 nmdc:mga00v17_24793_c1 3300050491 Bacteria 3481
256 nmdc:mga00v17_84907_c1 3300050491 Bacteria 1982
257 nmdc:mga06z11_11152_c1 3300050494 Bacteria 3862
258 nmdc:mga04h51_9202_c2 3300050495 Bacteria 1933
259 nmdc:mga05p37_153203_c1 3300050507 Bacteria 2818
260 nmdc:mga05p37_29515_c1 3300050507 Bacteria 6691
261 nmdc:mga09592_215825_c1 3300050508 Bacteria 1662
262 nmdc:mga0qj67_154888_c1 3300050509 Bacteria 1859
263 nmdc:mga0qj67_227022_c1 3300050509 Bacteria 1515
264 nmdc:mga0qj67_27145_c1 3300050509 Bacteria 4435
265 nmdc:mga08y16_242369_c1 3300050511 Bacteria 1863
266 nmdc:mga08y16_84772_c1 3300050511 Bacteria 3303
267 nmdc:mga0n895_448584_c1 3300050512 Bacteria 1303
268 nmdc:mga08x19_293483_c1 3300050514 Bacteria 1128
269 nmdc:mga0sz30_15010_c1 3300050516 Bacteria 3057
270 Ga0495655_0002305 3300053083 Bacteria 3016
271 Ga0500644_0047212 3300053088 Bacteria 1459
272 Ga0500556_0000891 3300053104 Bacteria 16711
273 Ga0500562_000683 3300053108 Bacteria 8254
274 Ga0500559_0000548 3300053136 Bacteria 26016
275 Ga0500616_0011375 3300053153 Bacteria 5260
276 Ga0500616_0125695 3300053153 Bacteria 1218
277 Ga0501082_0001658 3300060353 Bacteria 19598
278 Ga0530510_0001257 3300061734 Bacteria 16920
279 Ga0530510_0346468 3300061734 Bacteria 1116
280 2643754297 2643221546 Bacteria 2910897
281 2644229296 2643221641 Bacteria 4490190
282 2644490169 2643221687 Bacteria 6500351
283 2644607607 2643221711 Bacteria 4865335
284 2644639185 2643221715 Bacteria 6671032
285 2753073192 2751185734 Bacteria 8863695
286 2786673503 2786546132 Bacteria 10419719
287 2809228452 2808606447 Bacteria 3572005
288 2812321980 2811994872 Bacteria 4121241
289 2821268830 2821268502 Bacteria 3750023
290 2832005935 2832004796 Bacteria 6538017
291 2842140340 2842134933 Bacteria 5847019
292 2852634162 2852632344 Bacteria 3463163
293 2866067775 2866065130 Bacteria 6518152
294 2895881766 2895880812 Bacteria 11255272
295 2897561907 2897561785 Bacteria 3256946
296 2902839019 2902837492 Bacteria 6697721
297 2915359486 2915358134 Bacteria 6050864
298 2929217954 2929212328 Bacteria 7708288
299 2939658744 2939657138 Bacteria 3740283
300 2939661465 2939660829 Bacteria 3784848
301 2954679809 2954673503 Bacteria 9685905
302 2954684344 2954682443 Bacteria 9862841
303 3001891339 3001889506 Bacteria 2975194
304 8002782948 8002775197 Bacteria 10728764
305 8047715928 8047710418 Bacteria 11023148
306 8054612827 8054609563 Bacteria 5170090
307 Ga0055540_1012484
308 rootL2_10076769
309 rootL2_10085567
310 JGI25407J50210_10007697
311 Ga0070683_100054848
312 Ga0068868_100080127
313 Ga0070671_100009334
314 Ga0070659_100182059
315 Ga0070667_100105132
316 Ga0070710_10001017
317 Ga0070663_100034181
318 Ga0070663_100058302
319 Ga0070663_100212741
320 Ga0070678_100190637
321 Ga0070678_100222239
322 Ga0070684_100365025
323 Ga0068853_100017988
324 Ga0068853_100388836
325 Ga0070665_100135653
326 Ga0068864_100080415
327 Ga0068866_10255029
328 Ga0068861_100155635
329 Ga0068863_100178782
330 Ga0068860_100016209
331 Ga0068860_100310969
332 Ga0081455_10010445
333 Ga0081455_10023854
334 Ga0081455_10060543
335 Ga0081539_10037211
336 Ga0075365_10003040
337 Ga0075368_10041834
338 Ga0075363_100039881
339 Ga0075363_100046510
340 Ga0075364_10036687
341 Ga0075364_10052306
342 Ga0075364_10154145
343 Ga0075432_10030384
344 Ga0070716_100284531
345 Ga0075369_10001854
346 Ga0075369_10025319
347 Ga0075428_100011287
348 Ga0075428_100148876
349 Ga0075428_100341491
350 Ga0075430_100005407
351 Ga0068865_100069484
352 Ga0097620_100193452
353 Ga0105245_10224022
354 Ga0105247_10036682
355 Ga0105247_10213246
356 Ga0114129_10039072
357 Ga0114129_10338781
358 Ga0105243_10083001
359 Ga0105249_10094590
360 Ga0105030_101000
361 Ga0105028_102671
362 Ga0157370_10248951
363 Ga0157369_10609923
364 Ga0171462_1004
365 Ga0163162_10147664
366 Ga0163162_10590870
367 Ga0157375_10131640
368 Ga0157375_10417727
369 Ga0157380_10007750
370 Ga0157380_10023224
371 Ga0157380_10251621
372 Ga0157376_10689154
373 Ga0163161_10046466
374 Ga0163161_10250816
375 Ga0209646_1000167
376 Ga0209051_1004261
377 Ga0207692_10001493
378 Ga0207710_10036212
379 Ga0207688_10051411
380 Ga0207680_10058331
381 Ga0207645_10047081
382 Ga0207643_10007297
383 Ga0207654_10100878
384 Ga0207644_10001495
385 Ga0207669_10115631
386 Ga0207711_10032446
387 Ga0207689_10384079
388 Ga0207689_10397680
389 Ga0207668_10423724
390 Ga0207658_10122018
391 Ga0207677_10400541
392 Ga0207639_10033296
393 Ga0207639_10048654
394 Ga0207678_10010331
395 Ga0207678_10032509
396 Ga0207678_10093999
397 Ga0207678_10259280
398 Ga0207702_10130310
399 Ga0207641_10174844
400 Ga0207648_10070231
401 Ga0207676_10076841
402 Ga0207675_100088909
403 Ga0207675_100122103
404 Ga0207675_100199208
405 Ga0207683_10062432
406 Ga0207683_10075620
407 Ga0207683_10106302
408 Ga0207683_10134409
409 Ga0268266_10009116
410 Ga0268266_10042497
411 Ga0268264_10007529
412 Ga0307515_10000227
413 Ga0316177_1184132
414 Ga0314311_1088219
415 Ga0316575_10007582
416 Ga0316576_10023375
417 Ga0316578_10005887
418 Ga0307516_10000441
419 Ga0307405_10028778
420 Ga0307405_10138079
421 Ga0307405_10302870
422 Ga0307405_10382894
423 Ga0316577_10133523
424 Ga0307413_10020330
425 Ga0307413_10037481
426 Ga0307413_10144128
427 Ga0307410_10036781
428 Ga0307410_10053880
429 Ga0307410_10409290
430 Ga0326468_10001013
431 Ga0307406_10015150
432 Ga0307406_10049533
433 Ga0307406_10059053
434 Ga0307406_10251762
435 Ga0307407_10019932
436 Ga0307407_10056519
437 Ga0307407_10153849
438 Ga0307409_100025380
439 Ga0307409_100167140
440 Ga0307409_100207645
441 Ga0307409_100425590
442 Ga0307409_100503226
443 Ga0307416_100074948
444 Ga0307416_100212734
445 Ga0307416_100338997
446 Ga0307416_100526197
447 Ga0307414_10012086
448 Ga0307414_10050909
449 Ga0307414_10063936
450 Ga0307414_10164884
451 Ga0307414_10196430
452 Ga0307411_10018062
453 Ga0307411_10120588
454 Ga0307415_100090130
455 Ga0373931_0239725
456 Ga0316582_0008109
457 Ga0316584_0029359
458 Ga0395900_0396090
459 Ga0395898_0137431
460 Ga0395901_0190576
461 Ga0439461_0002830
462 Ga0439466_0011924
463 Ga0439465_0002677
464 Ga0439465_0003094
465 Ga0439431_0002148
466 Ga0439431_0003523
467 Ga0439433_0009467
468 Ga0439442_007477
469 Ga0439432_029164
470 Ga0439454_019221
471 Ga0439455_0002831
472 Ga0439463_039313
473 Ga0450903_009485
474 Ga0439434_0006422
475 Ga0439434_0008409
476 Ga0466972_0038591
477 Ga0466965_0003919
478 Ga0466966_0116908
479 Ga0466968_0001806
480 Ga0466960_0014305
481 Ga0495582_0153007
482 Ga0495686_0001229
483 Ga0496100_0003571
484 Ga0496100_0010598
485 Ga0496101_0001714
486 Ga0496101_0009299
487 Ga0496102_0002641
488 Ga0496102_0059372
489 Ga0496103_0000847
490 Ga0496104_0000702
491 Ga0496104_0051539
492 Ga0496104_0055396
493 Ga0496104_0079980
494 Ga0496105_0008663
495 Ga0496105_0008693
496 Ga0496105_0105505
497 Ga0496105_0131252
498 Ga0496105_0241970
499 Ga0496106_0296807
500 Ga0496107_0043736
501 Ga0496108_0000008
502 Ga0496108_0039594
503 Ga0496108_0168007
504 Ga0496108_0246869
505 Ga0496109_0018642
506 Ga0496109_0030286
507 Ga0496109_0106368
508 Ga0496109_0209511
509 Ga0496110_0002091
510 Ga0496110_0026284
511 Ga0496110_0175646
512 Ga0496112_0002704
513 Ga0496113_0119098
514 Ga0496113_0163776
515 Ga0496114_0008413
516 Ga0496114_0054828
517 Ga0496115_0016692
518 Ga0496119_0000367
519 Ga0501031_0005194
520 Ga0501031_0088997
521 Ga0501033_0010434
522 Ga0501033_0165776
523 Ga0501034_0311162
524 Ga0501036_0005865
525 Ga0501036_0033435
526 Ga0501036_0142511
527 Ga0501036_0169500
528 Ga0501037_0033678
529 Ga0501038_0018263
530 Ga0501038_0258776
531 Ga0501039_0000329
532 Ga0501040_0022395
533 Ga0501040_0145314
534 Ga0501041_0004767
535 Ga0501042_0003282
536 Ga0501042_0102071
537 Ga0501042_0179152
538 Ga0501043_0147708
539 Ga0501043_0393696
540 Ga0501046_0004598
541 Ga0501047_0187421
542 Ga0501048_0019287
543 Ga0501048_0134868
544 Ga0501068_0143964
545 Ga0501068_0203589
546 Ga0501069_0065907
547 Ga0501070_0003615
548 Ga0501070_0168393
549 Ga0501071_0016148
550 Ga0501071_0114637
551 Ga0501072_0176577
552 Ga0501075_0001105
553 Ga0501077_0053860
554 Ga0501079_0014303
555 Ga0501081_0000955
556 Ga0501081_0257869
557 Ga0501083_0021537
558 Ga0501035_0196448
559 Ga0501045_0101759
560 nmdc:mga03n38_24556_c1
561 nmdc:mga00v17_24793_c1
562 nmdc:mga00v17_84907_c1
563 nmdc:mga06z11_11152_c1
564 nmdc:mga04h51_9202_c2
565 nmdc:mga05p37_153203_c1
566 nmdc:mga05p37_29515_c1
567 nmdc:mga09592_215825_c1
568 nmdc:mga0qj67_154888_c1
569 nmdc:mga0qj67_227022_c1
570 nmdc:mga0qj67_27145_c1
571 nmdc:mga08y16_242369_c1
572 nmdc:mga08y16_84772_c1
573 nmdc:mga0n895_448584_c1
574 nmdc:mga08x19_293483_c1
575 nmdc:mga0sz30_15010_c1
576 Ga0495655_0002305
577 Ga0500644_0047212
578 Ga0500556_0000891
579 Ga0500562_000683
580 Ga0500559_0000548
581 Ga0500616_0011375
582 Ga0500616_0125695
583 Ga0501082_0001658
584 Ga0530510_0001257
585 Ga0530510_0346468
586 2643754297
587 2644229296
588 2644490169
589 2644607607
590 2644639185
591 2753073192
592 2786673503
593 2809228452
594 2812321980
595 2821268830
596 2832005935
597 2842140340
598 2852634162
599 2866067775
600 2895881766
601 2897561907
602 2902839019
603 2915359486
604 2929217954
605 2939658744
606 2939661465
607 2954679809
608 2954684344
609 3001891339
610 8002782948
611 8047715928
612 8054612827

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

26

319

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3c8n-assembly2.cif.gz_C crystal structure of apo-fgd1 from mycobacterium tuberculosis 0.9555 1 318
3c8n-assembly2.cif.gz_C crystal structure of apo-fgd1 from mycobacterium tuberculosis 0.9411 1 318
3c8n-assembly1.cif.gz_A crystal structure of apo-fgd1 from mycobacterium tuberculosis 0.9204 2 318
3c8n-assembly2.cif.gz_D crystal structure of apo-fgd1 from mycobacterium tuberculosis 0.9181 1 318
3c8n-assembly1.cif.gz_B crystal structure of apo-fgd1 from mycobacterium tuberculosis 0.9156 2 318
ID Description Score Start End Superfamily
1rhcA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9053 2 322 3.20.20.30
af_P96809_35_360_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9033 1 316 3.20.20.30
1rhcA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8999 2 322 3.20.20.30
3b4yB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.898 1 318 3.20.20.30
3b4yB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8846 1 318 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A2W2CA36-F1-model_v4 LLM class F420-dependent oxidoreductase 0.999 1 156 GO:0016705
AF-A0A7W0LSN9-F1-model_v4 TIGR03557 family F420-dependent LLM class oxidoreductase (EC 1.-.-.-) 0.9977 1 234 GO:0016705
AF-A0A3D2NJI0-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9962 1 140 GO:0016705
AF-A0A7C6IBK2-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9961 1 153 GO:0016705
AF-A0A7W4YB62-F1-model_v4 Putative non-F420 flavinoid oxidoreductase 0.996 1 318 GO:0016705

Map