F398219

General Info

Members Datasets Scaffolds Average Seq Length
305 217 290 301

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0009054|Ga0395905_0009054_7843_8907
Length 354
Sequence LVLLLTVLSSRRCASQENEQIHIDPRAHAEASNGTLCLWDNQASNSNSVPFTRTIEIEMDRLDAMRLFTRVVERRSFTQAARDLAIPRSTATQVIKQLEKRLGVGLLQRTTRLVTPTLDGEVFYSRCLAILDDVEDAEGAFRETAPKGTLRIEVQGTLARHFLVPALPEFLSKYPEMKLAMSEGERWVDVIQEGVDCVLRYGGLKDSELIARKVATLERITVAAPSYLERFGEPQTPDDLELHNAVGLRSITAGTLIPFEFETANGVRKLELDGPLSVTGTESFHAAILLGLGLAQMPTFHIANELASGRAVRILSNYRVPSVPVSVLYPRNRQLSPRVRVFIEWVARQFAGAT

Samples

Sample ID Description Type Environment
1 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
2 2506520008 Serratia plymuthica AS12 Isolate Unclassified
3 2508501050 Microvirga lupini Lut6 Isolate Nodule
4 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
5 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
6 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
7 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
8 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
9 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
10 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
11 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
12 2957443900 Sinorhizobium meliloti USDA1734 Isolate Nodule
13 2960660292 Sinorhizobium meliloti USDA1883 Isolate Nodule
14 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
15 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
16 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
17 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
18 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
19 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
20 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
21 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
22 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
23 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
24 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
25 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
29 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
30 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
31 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
32 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
33 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
39 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
49 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
50 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
51 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
54 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
59 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
60 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
76 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
80 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
82 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
113 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
118 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
119 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
120 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
121 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
122 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
123 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
124 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
125 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
126 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
127 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
128 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
129 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
133 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
134 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
135 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
136 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
137 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
138 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
139 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
140 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
141 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
142 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
143 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
144 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
145 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
146 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
147 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
148 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
149 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
150 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
151 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
152 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
153 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
154 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
155 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
156 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
157 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
158 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
159 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
160 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
161 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
162 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
163 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
164 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
165 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
166 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
167 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
168 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
169 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
170 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
171 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
172 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
173 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
174 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
175 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
176 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
177 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
178 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
179 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
180 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
181 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
182 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
183 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
184 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
185 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
186 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
188 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
189 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
192 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
194 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
195 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
196 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
198 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
199 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
200 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
201 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
202 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
203 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
204 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
206 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
207 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
208 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
209 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
210 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
211 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
212 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
213 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
214 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
215 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
216 640753048 Serratia proteamaculans 568 Isolate Endosphere
217 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.08
Metatranscriptomes 0
Isolates 4.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.49
Nodule 2.62
Rhizoplane 1.97
Rhizosphere 76.72
Stem 0
Stem Tuber 0
Unclassified 8.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1001723 3300001904 Bacteria 3942
2 JGI24739J22299_10065940 3300001989 Unclassified 1134
3 JGI24737J22298_10020793 3300001990 Bacteria 2094
4 JGI24737J22298_10026820 3300001990 Bacteria 1819
5 rootH2_10180370 3300003320 Bacteria 1902
6 Ga0055525_1000043 3300003759 Bacteria 268656
7 Ga0055542_1000053 3300003762 Bacteria 172877
8 Ga0055542_1000220 3300003762 Bacteria 69389
9 Ga0055537_1005839 3300003773 Bacteria 3223
10 Ga0055524_1001195 3300003775 Bacteria 15425
11 Ga0055534_1000100 3300003784 Bacteria 66813
12 Ga0055530_10049021 3300003791 Bacteria 989
13 Ga0055540_1000927 3300003792 Bacteria 19158
14 Ga0070670_100245445 3300005331 Bacteria 1559
15 Ga0068868_100168882 3300005338 Bacteria 1810
16 Ga0070660_100122043 3300005339 Bacteria 2080
17 Ga0070668_100032185 3300005347 Bacteria 3991
18 Ga0070671_100000522 3300005355 Bacteria 27001
19 Ga0070673_100138624 3300005364 Bacteria 2050
20 Ga0070688_100295459 3300005365 Bacteria 1169
21 Ga0070667_100191535 3300005367 Bacteria 1812
22 Ga0070678_100004717 3300005456 Bacteria 7766
23 Ga0070678_100405960 3300005456 Bacteria 1184
24 Ga0070662_100086826 3300005457 Bacteria 2340
25 Ga0068867_100218556 3300005459 Bacteria 1534
26 Ga0070699_100343664 3300005518 Bacteria 1343
27 Ga0070672_100124891 3300005543 Bacteria 2110
28 Ga0070686_100097207 3300005544 Bacteria 1982
29 Ga0070693_100082770 3300005547 Bacteria 1917
30 Ga0070665_100054650 3300005548 Bacteria 4005
31 Ga0070664_100353517 3300005564 Bacteria 1337
32 Ga0068857_100001542 3300005577 Bacteria 18443
33 Ga0068857_100326404 3300005577 Unclassified 1418
34 Ga0068854_100288596 3300005578 Bacteria 1323
35 Ga0068856_100000184 3300005614 Bacteria 65002
36 Ga0070702_100115987 3300005615 Bacteria 1669
37 Ga0068852_100001983 3300005616 Bacteria 13963
38 Ga0068859_100034152 3300005617 Bacteria 5105
39 Ga0068866_10075744 3300005718 Bacteria 1792
40 Ga0068870_10131175 3300005840 Bacteria 1456
41 Ga0068863_100006008 3300005841 Bacteria 11903
42 Ga0068863_100015613 3300005841 Bacteria 7295
43 Ga0068863_100117293 3300005841 Bacteria 2537
44 Ga0068858_100007828 3300005842 Bacteria 10312
45 Ga0068860_100012867 3300005843 Bacteria 8224
46 Ga0081540_1001644 3300005983 Bacteria 19034
47 Ga0081540_1042999 3300005983 Bacteria 2323
48 Ga0081540_1080689 3300005983 Bacteria 1465
49 Ga0070716_100220117 3300006173 Bacteria 1275
50 Ga0097621_100037320 3300006237 Bacteria 3893
51 Ga0068865_100093029 3300006881 Bacteria 2191
52 Ga0097620_100034153 3300006931 Bacteria 5105
53 Ga0079104_1001521 3300006946 Bacteria 15327
54 Ga0105251_10000263 3300009011 Bacteria 52344
55 Ga0105244_10019817 3300009036 Bacteria 3745
56 Ga0105240_10133231 3300009093 Bacteria 2978
57 Ga0105245_10055477 3300009098 Bacteria 3559
58 Ga0105241_10000103 3300009174 Bacteria 60683
59 Ga0105241_10053538 3300009174 Bacteria 3087
60 Ga0105249_10328749 3300009553 Bacteria 1542
61 Ga0105246_10049733 3300011119 Bacteria 2872
62 Ga0157373_10005266 3300013100 Bacteria 9713
63 Ga0157369_10205622 3300013105 Bacteria 2065
64 Ga0157378_10184416 3300013297 Bacteria 1964
65 Ga0157372_10160716 3300013307 Bacteria 2596
66 Ga0157375_10084861 3300013308 Bacteria 3216
67 Ga0157375_10457504 3300013308 Bacteria 1442
68 Ga0163163_10033176 3300014325 Bacteria 4992
69 Ga0163163_10162226 3300014325 Bacteria 2281
70 Ga0182008_10002651 3300014497 Bacteria 11111
71 Ga0157376_10133298 3300014969 Bacteria 2220
72 Ga0163161_10000005 3300017792 Bacteria 327860
73 Ga0213872_10000563 3300021361 Bacteria 28670
74 Ga0213872_10006989 3300021361 Bacteria 5598
75 Ga0213872_10010508 3300021361 Bacteria 4403
76 Ga0209565_1000076 3300025263 Bacteria 161760
77 Ga0209565_1001030 3300025263 Bacteria 14160
78 Ga0209673_1008027 3300025273 Bacteria 4754
79 Ga0209675_1000047 3300025291 Bacteria 221683
80 Ga0209025_1001684 3300025294 Bacteria 27021
81 Ga0209025_1068130 3300025294 Bacteria 1281
82 Ga0209564_1000756 3300025295 Bacteria 45734
83 Ga0209564_1004350 3300025295 Bacteria 8720
84 Ga0209758_1020342 3300025297 Bacteria 3145
85 Ga0209050_1000005 3300025298 Bacteria 1557793
86 Ga0209050_1007570 3300025298 Bacteria 6046
87 Ga0209256_1000453 3300025299 Bacteria 62097
88 Ga0209051_1000212 3300025303 Bacteria 100189
89 Ga0209257_1000458 3300025304 Bacteria 75709
90 Ga0209257_1001151 3300025304 Bacteria 33659
91 Ga0207655_1018137 3300025728 Bacteria 3753
92 Ga0207713_1000333 3300025735 Bacteria 52661
93 Ga0207710_10000167 3300025900 Bacteria 69349
94 Ga0207647_10001170 3300025904 Bacteria 20218
95 Ga0207654_10000091 3300025911 Bacteria 60737
96 Ga0207654_10009644 3300025911 Bacteria 4910
97 Ga0207657_10082490 3300025919 Bacteria 2699
98 Ga0207649_10072790 3300025920 Bacteria 2200
99 Ga0207650_10014944 3300025925 Bacteria 5401
100 Ga0207687_10004939 3300025927 Bacteria 8851
101 Ga0207644_10001950 3300025931 Bacteria 13364
102 Ga0207690_10051669 3300025932 Bacteria 2750
103 Ga0207706_10010393 3300025933 Bacteria 8502
104 Ga0207706_10097082 3300025933 Bacteria 2591
105 Ga0207706_10198537 3300025933 Bacteria 1759
106 Ga0207670_10122925 3300025936 Bacteria 1890
107 Ga0207691_10023808 3300025940 Bacteria 5764
108 Ga0207711_10063479 3300025941 Bacteria 3188
109 Ga0207711_10121567 3300025941 Bacteria 2332
110 Ga0207651_10101252 3300025960 Bacteria 2138
111 Ga0207668_10109866 3300025972 Bacteria 2066
112 Ga0207668_10222884 3300025972 Bacteria 1515
113 Ga0207658_10027353 3300025986 Bacteria 4006
114 Ga0207658_10105614 3300025986 Bacteria 2215
115 Ga0207658_10159938 3300025986 Bacteria 1845
116 Ga0207703_10003573 3300026035 Bacteria 12995
117 Ga0207708_10015147 3300026075 Bacteria 5777
118 Ga0207641_10004036 3300026088 Bacteria 12803
119 Ga0207641_10370074 3300026088 Bacteria 1370
120 Ga0207648_10015330 3300026089 Bacteria 7052
121 Ga0207674_10000065 3300026116 Bacteria 109485
122 Ga0207674_10027896 3300026116 Bacteria 5965
123 Ga0207674_10134630 3300026116 Bacteria 2433
124 Ga0207675_100011683 3300026118 Bacteria 8210
125 Ga0207683_10027572 3300026121 Bacteria 4908
126 Ga0207683_10031210 3300026121 Bacteria 4623
127 Ga0207698_10002302 3300026142 Bacteria 11313
128 Ga0209281_1000413 3300027111 Bacteria 64492
129 Ga0209282_1000010 3300027666 Bacteria 231627
130 Ga0268266_10275951 3300028379 Bacteria 1562
131 Ga0268265_10030862 3300028380 Bacteria 3865
132 Ga0268265_10038907 3300028380 Bacteria 3502
133 Ga0268264_10025218 3300028381 Bacteria 4857
134 Ga0307517_10030515 3300028786 Bacteria 6313
135 Ga0307513_10074427 3300031456 Bacteria 3532
136 Ga0307513_10103234 3300031456 Bacteria 2868
137 Ga0307413_10094268 3300031824 Bacteria 1959
138 Ga0307410_10315476 3300031852 Bacteria 1239
139 Ga0307407_10035038 3300031903 Bacteria 2754
140 Ga0307409_100148292 3300031995 Bacteria 2032
141 Ga0307414_10295069 3300032004 Unclassified 1368
142 Ga0307411_10142428 3300032005 Bacteria 1769
143 Ga0307415_100332454 3300032126 Bacteria 1272
144 Ga0307510_10014102 3300033180 Bacteria 9464
145 Ga0307510_10181345 3300033180 Bacteria 1667
146 Ga0395899_0002227 3300037312 Bacteria 15895
147 Ga0395899_0242297 3300037312 Bacteria 1240
148 Ga0395900_0013290 3300037418 Bacteria 8416
149 Ga0395900_0053923 3300037418 Bacteria 4139
150 Ga0395900_0280718 3300037418 Bacteria 1657
151 Ga0395898_0020493 3300037466 Bacteria 6715
152 Ga0395905_0009054 3300037471 Bacteria 9765
153 Ga0395905_0010646 3300037471 Bacteria 8922
154 Ga0395905_0032912 3300037471 Bacteria 4874
155 Ga0395905_0260025 3300037471 Bacteria 1621
156 Ga0395905_0275692 3300037471 Bacteria 1567
157 Ga0395901_0001383 3300038443 Bacteria 25376
158 Ga0395901_0005992 3300038443 Bacteria 12310
159 Ga0395901_0033540 3300038443 Bacteria 5300
160 Ga0395901_0294169 3300038443 Bacteria 1684
161 Ga0436365_0020968 3300039437 Bacteria 2351
162 Ga0436361_0052328 3300039447 Bacteria 4973
163 Ga0436361_0163153 3300039447 Bacteria 3347
164 Ga0436361_0222948 3300039447 Bacteria 9032
165 Ga0436361_1009911 3300039447 Bacteria 15478
166 Ga0439448_0035315 3300042005 Bacteria 1600
167 Ga0439432_005430 3300042006 Bacteria 4590
168 Ga0439455_0002240 3300042012 Bacteria 3470
169 Ga0439458_0002756 3300042157 Bacteria 4235
170 Ga0439458_0041421 3300042157 Bacteria 1118
171 Ga0466966_0048433 3300044684 Bacteria 2707
172 Ga0466968_0004603 3300044735 Bacteria 5162
173 Ga0466957_0001826 3300044842 Bacteria 11228
174 Ga0466957_0110922 3300044842 Bacteria 1739
175 Ga0466959_0094809 3300045049 Bacteria 2140
176 Ga0466967_0037040 3300045976 Bacteria 4170
177 Ga0495627_000128 3300046453 Bacteria 92036
178 Ga0495638_0000261 3300046460 Bacteria 70934
179 Ga0495650_0000116 3300046471 Bacteria 189814
180 Ga0495650_0067533 3300046471 Bacteria 1412
181 Ga0495605_0015784 3300046474 Bacteria 4103
182 Ga0495639_0053098 3300046475 Bacteria 1846
183 Ga0495584_0000315 3300046491 Bacteria 33829
184 Ga0495584_0120317 3300046491 Bacteria 1329
185 Ga0495596_0000019 3300046500 Bacteria 114118
186 Ga0495607_0004318 3300046501 Bacteria 10488
187 Ga0495583_0002562 3300046506 Bacteria 15318
188 Ga0495610_0000164 3300046512 Bacteria 73583
189 Ga0495616_0003376 3300046513 Bacteria 10239
190 Ga0495644_0024468 3300046523 Bacteria 2297
191 Ga0495663_0004549 3300046525 Bacteria 3890
192 Ga0495654_0000343 3300046530 Bacteria 40318
193 Ga0495654_0081472 3300046530 Bacteria 1517
194 Ga0495609_0000768 3300046538 Bacteria 24052
195 Ga0495597_0005385 3300046542 Bacteria 6783
196 Ga0495622_0008098 3300046557 Bacteria 4871
197 Ga0495633_0023473 3300046558 Bacteria 3056
198 Ga0495668_0003641 3300046616 Bacteria 11394
199 Ga0495625_0000828 3300046660 Bacteria 42577
200 Ga0495625_0002100 3300046660 Bacteria 22251
201 Ga0495625_0037565 3300046660 Bacteria 3553
202 Ga0495625_0230471 3300046660 Bacteria 1210
203 Ga0495661_0050509 3300046665 Bacteria 2517
204 Ga0495661_0116630 3300046665 Bacteria 1481
205 Ga0495669_0002409 3300046684 Bacteria 7668
206 Ga0495670_0000050 3300046691 Bacteria 64116
207 Ga0495649_0023043 3300046694 Bacteria 3479
208 Ga0495589_0000040 3300046794 Bacteria 140801
209 Ga0495600_0019601 3300046809 Bacteria 4321
210 Ga0495660_0038975 3300046810 Bacteria 2640
211 Ga0495672_0000198 3300047320 Bacteria 85895
212 Ga0495672_0009628 3300047320 Bacteria 6974
213 Ga0495677_0001943 3300047445 Bacteria 8259
214 Ga0495677_0108670 3300047445 Bacteria 1053
215 Ga0495686_0000055 3300047472 Bacteria 255566
216 Ga0495686_0000132 3300047472 Bacteria 151609
217 Ga0495686_0077122 3300047472 Bacteria 2041
218 Ga0496102_0012799 3300048905 Bacteria 7264
219 Ga0496106_0298773 3300048909 Bacteria 1291
220 Ga0496107_0049532 3300048910 Bacteria 3027
221 Ga0496110_0203125 3300048913 Bacteria 1801
222 Ga0496112_0359341 3300048915 Bacteria 1398
223 Ga0496113_0442532 3300048916 Bacteria 1044
224 Ga0496116_0006926 3300048919 Bacteria 10164
225 Ga0496118_0186977 3300048921 Bacteria 1244
226 Ga0496119_0156352 3300048922 Bacteria 1217
227 Ga0496121_0000083 3300048924 Bacteria 226816
228 Ga0496121_0000797 3300048924 Bacteria 57614
229 Ga0496121_0001021 3300048924 Bacteria 49886
230 Ga0496121_0002825 3300048924 Bacteria 25670
231 Ga0496121_0049752 3300048924 Bacteria 3549
232 Ga0496121_0171695 3300048924 Bacteria 1574
233 Ga0496122_0001894 3300048925 Bacteria 31683
234 Ga0496123_0002508 3300048926 Bacteria 22584
235 Ga0496125_0023133 3300048928 Bacteria 5747
236 Ga0496125_0063356 3300048928 Bacteria 2949
237 Ga0496125_0198890 3300048928 Bacteria 1314
238 Ga0496125_0305033 3300048928 Bacteria 973
239 Ga0501031_0054236 3300049568 Bacteria 2612
240 Ga0501031_0244242 3300049568 Unclassified 1167
241 Ga0501032_0001932 3300049569 Bacteria 16328
242 Ga0501033_0062474 3300049570 Bacteria 2742
243 Ga0501033_0150523 3300049570 Bacteria 1679
244 Ga0501034_0001874 3300049571 Bacteria 26681
245 Ga0501034_0017080 3300049571 Bacteria 7442
246 Ga0501034_0071665 3300049571 Bacteria 3475
247 Ga0501036_0055206 3300049572 Bacteria 3365
248 Ga0501037_0001836 3300049573 Bacteria 15423
249 Ga0501037_0169145 3300049573 Bacteria 1554
250 Ga0501038_0016910 3300049574 Bacteria 6601
251 Ga0501038_0091799 3300049574 Bacteria 2543
252 Ga0501039_0001164 3300049575 Bacteria 19327
253 Ga0501043_0027530 3300049579 Bacteria 4462
254 Ga0501043_0168536 3300049579 Unclassified 1709
255 Ga0501043_0185324 3300049579 Bacteria 1620
256 Ga0501046_0003034 3300049580 Bacteria 15518
257 Ga0501047_0005642 3300049581 Bacteria 11792
258 Ga0501047_0018172 3300049581 Bacteria 6737
259 Ga0501047_0024618 3300049581 Bacteria 5778
260 Ga0501047_0061905 3300049581 Bacteria 3611
261 Ga0501047_0081993 3300049581 Bacteria 3100
262 Ga0501047_0185745 3300049581 Bacteria 1944
263 Ga0501048_0105141 3300049582 Bacteria 1992
264 Ga0501067_0000831 3300049583 Bacteria 16661
265 Ga0501067_0030292 3300049583 Bacteria 3001
266 Ga0501070_0010898 3300049586 Bacteria 7679
267 Ga0501070_0156323 3300049586 Bacteria 1880
268 Ga0501073_0006486 3300049589 Bacteria 8706
269 Ga0501249_000477 3300049679 Bacteria 9977
270 Ga0501080_0000002 3300049742 Bacteria 218492
271 Ga0501035_0000089 3300049822 Bacteria 112536
272 Ga0501035_0053757 3300049822 Bacteria 3600
273 Ga0501035_0069233 3300049822 Bacteria 3128
274 Ga0501035_0103968 3300049822 Bacteria 2491
275 Ga0501044_0000249 3300049823 Bacteria 68464
276 Ga0501044_0015711 3300049823 Bacteria 8153
277 Ga0501044_0047000 3300049823 Bacteria 4466
278 Ga0501044_0373067 3300049823 Bacteria 1343
279 Ga0501045_0140971 3300049824 Unclassified 1792
280 Ga0501045_0250896 3300049824 Bacteria 1317
281 nmdc:mga00v17_6399_c1 3300050491 Bacteria 6245
282 nmdc:mga0n895_271182_c1 3300050512 Bacteria 1721
283 Ga0500643_000676 3300053087 Bacteria 22828
284 Ga0500595_001361 3300053119 Bacteria 13155
285 Ga0500658_0014899 3300053134 Bacteria 2881
286 Ga0500568_0058301 3300053139 Bacteria 1500
287 Ga0500619_001287 3300053154 Bacteria 4392
288 Ga0500634_0102020 3300053161 Bacteria 1434
289 Ga0500596_002776 3300053735 Bacteria 3426
290 Ga0501082_0026413 3300060353 Bacteria 5004

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025294 Ga0209025_1068130 Ga0209025_10681302 288
2 3300025304 Ga0209257_1000458 Ga0209257_100045838 288
3 3300049579 Ga0501043_0027530 Ga0501043_0027530_296_1198 288
4 3300049581 Ga0501047_0018172 Ga0501047_0018172_4904_5806 288
5 3300044735 Ga0466968_0004603 Ga0466968_0004603_4265_5143 289
6 iso_pu_bacteria 2791355092 2792630329 289
7 iso_pu_bacteria 2957443900 2957448255 289
8 iso_pu_bacteria 2960660292 2960664470 289
9 iso_pu_bacteria 8056689827 8056692421 289
10 3300048924 Ga0496121_0171695 Ga0496121_0171695_12_890 290
11 3300049571 Ga0501034_0017080 Ga0501034_0017080_5418_6293 291
12 iso_pu_bacteria 2643221550 2643772582 291
13 iso_pu_bacteria 2898329390 2898331541 291
14 3300005364 Ga0070673_100138624 Ga0070673_1001386242 292
15 3300025933 Ga0207706_10198537 Ga0207706_101985372 292
16 3300037471 Ga0395905_0275692 Ga0395905_0275692_41_937 293
17 iso_pu_bacteria 2506520007 2506580009 293
18 iso_pu_bacteria 2506520008 2506585148 293
19 iso_pu_bacteria 2508501071 2508853809 293
20 iso_pu_bacteria 2654587920 2656277056 293
21 iso_pu_bacteria 2806310673 2807177378 293
22 iso_pu_bacteria 2869551831 2869555903 293
23 iso_pu_bacteria 640753048 640939280 293
24 3300021361 Ga0213872_10000563 Ga0213872_1000056319 294
25 3300021361 Ga0213872_10006989 Ga0213872_100069894 294
26 3300039447 Ga0436361_0052328 Ga0436361_0052328_3168_4052 294
27 3300039447 Ga0436361_0163153 Ga0436361_0163153_1842_2726 294
28 3300039447 Ga0436361_1009911 Ga0436361_1009911_3754_4638 294
29 3300044842 Ga0466957_0001826 Ga0466957_0001826_2623_3507 294
30 3300005718 Ga0068866_10075744 Ga0068866_100757442 295
31 3300005841 Ga0068863_100117293 Ga0068863_1001172933 295
32 3300005983 Ga0081540_1042999 Ga0081540_10429991 295
33 3300006237 Ga0097621_100037320 Ga0097621_1000373202 295
34 3300009036 Ga0105244_10019817 Ga0105244_100198174 295
35 3300021361 Ga0213872_10010508 Ga0213872_100105082 295
36 3300025728 Ga0207655_1018137 Ga0207655_10181372 295
37 3300025911 Ga0207654_10009644 Ga0207654_100096444 295
38 3300025920 Ga0207649_10072790 Ga0207649_100727902 295
39 3300025927 Ga0207687_10004939 Ga0207687_100049396 295
40 3300026116 Ga0207674_10027896 Ga0207674_100278964 295
41 3300026121 Ga0207683_10027572 Ga0207683_100275723 295
42 3300028380 Ga0268265_10030862 Ga0268265_100308623 295
43 3300039447 Ga0436361_0222948 Ga0436361_0222948_1041_1928 295
44 3300046491 Ga0495584_0000315 Ga0495584_0000315_21513_22400 295
45 3300047472 Ga0495686_0000132 Ga0495686_0000132_140892_141779 295
46 3300048924 Ga0496121_0000083 Ga0496121_0000083_26300_27187 295
47 3300053161 Ga0500634_0102020 Ga0500634_0102020_122_1009 295
48 iso_pu_bacteria 2508501050 2508735184 295
49 iso_pu_bacteria 2687453601 2689446552 295
50 3300005614 Ga0068856_100000184 Ga0068856_10000018415 296
51 3300037471 Ga0395905_0009054 Ga0395905_0009054_7843_8907 296
52 3300038443 Ga0395901_0001383 Ga0395901_0001383_18170_19234 296
53 3300039437 Ga0436365_0020968 Ga0436365_0020968_1337_2227 296
54 3300048924 Ga0496121_0000797 Ga0496121_0000797_24015_24905 296
55 3300049822 Ga0501035_0053757 Ga0501035_0053757_273_1175 296
56 3300049823 Ga0501044_0015711 Ga0501044_0015711_1797_2699 296
57 3300049823 Ga0501044_0373067 Ga0501044_0373067_72_974 296
58 3300003773 Ga0055537_1005839 Ga0055537_10058392 297
59 3300003791 Ga0055530_10049021 Ga0055530_100490211 297
60 3300003792 Ga0055540_1000927 Ga0055540_10009275 297
61 3300006946 Ga0079104_1001521 Ga0079104_10015219 297
62 3300009011 Ga0105251_10000263 Ga0105251_1000026325 297
63 3300009174 Ga0105241_10000103 Ga0105241_1000010325 297
64 3300013100 Ga0157373_10005266 Ga0157373_100052664 297
65 3300014497 Ga0182008_10002651 Ga0182008_100026515 297
66 3300017792 Ga0163161_10000005 Ga0163161_10000005265 297
67 3300025263 Ga0209565_1001030 Ga0209565_10010304 297
68 3300025273 Ga0209673_1008027 Ga0209673_10080272 297
69 3300025295 Ga0209564_1004350 Ga0209564_10043508 297
70 3300025298 Ga0209050_1000005 Ga0209050_1000005219 297
71 3300025298 Ga0209050_1007570 Ga0209050_10075703 297
72 3300025303 Ga0209051_1000212 Ga0209051_1000212105 297
73 3300025304 Ga0209257_1001151 Ga0209257_10011512 297
74 3300025735 Ga0207713_1000333 Ga0207713_100033325 297
75 3300025911 Ga0207654_10000091 Ga0207654_1000009141 297
76 3300027111 Ga0209281_1000413 Ga0209281_100041325 297
77 3300037418 Ga0395900_0053923 Ga0395900_0053923_100_1005 297
78 3300037471 Ga0395905_0032912 Ga0395905_0032912_663_1568 297
79 3300038443 Ga0395901_0033540 Ga0395901_0033540_3934_4839 297
80 3300042006 Ga0439432_005430 Ga0439432_005430_2588_3481 297
81 3300046453 Ga0495627_000128 Ga0495627_000128_64262_65161 297
82 3300046491 Ga0495584_0120317 Ga0495584_0120317_279_1172 297
83 3300046500 Ga0495596_0000019 Ga0495596_0000019_69476_70369 297
84 3300046501 Ga0495607_0004318 Ga0495607_0004318_6096_6989 297
85 3300046512 Ga0495610_0000164 Ga0495610_0000164_51697_52590 297
86 3300046513 Ga0495616_0003376 Ga0495616_0003376_7778_8671 297
87 3300046530 Ga0495654_0000343 Ga0495654_0000343_15635_16528 297
88 3300046530 Ga0495654_0081472 Ga0495654_0081472_422_1315 297
89 3300046538 Ga0495609_0000768 Ga0495609_0000768_7580_8473 297
90 3300046542 Ga0495597_0005385 Ga0495597_0005385_712_1605 297
91 3300046665 Ga0495661_0050509 Ga0495661_0050509_1394_2287 297
92 3300046794 Ga0495589_0000040 Ga0495589_0000040_112554_113447 297
93 3300047320 Ga0495672_0009628 Ga0495672_0009628_4050_4943 297
94 3300048919 Ga0496116_0006926 Ga0496116_0006926_4407_5300 297
95 3300048924 Ga0496121_0002825 Ga0496121_0002825_24069_24962 297
96 3300048925 Ga0496122_0001894 Ga0496122_0001894_24117_25010 297
97 3300048926 Ga0496123_0002508 Ga0496123_0002508_6104_6997 297
98 3300048928 Ga0496125_0305033 Ga0496125_0305033_22_915 297
99 3300049570 Ga0501033_0150523 Ga0501033_0150523_488_1381 297
100 3300049581 Ga0501047_0024618 Ga0501047_0024618_3593_4486 297
101 3300049581 Ga0501047_0185745 Ga0501047_0185745_443_1336 297
102 3300049822 Ga0501035_0103968 Ga0501035_0103968_145_1038 297
103 3300005578 Ga0068854_100288596 Ga0068854_1002885961 298
104 3300028786 Ga0307517_10030515 Ga0307517_100305158 298
105 3300031456 Ga0307513_10103234 Ga0307513_101032344 298
106 3300033180 Ga0307510_10181345 Ga0307510_101813452 298
107 3300046471 Ga0495650_0000116 Ga0495650_0000116_16990_17886 298
108 3300046475 Ga0495639_0053098 Ga0495639_0053098_547_1443 298
109 3300046506 Ga0495583_0002562 Ga0495583_0002562_3891_4787 298
110 3300046557 Ga0495622_0008098 Ga0495622_0008098_1940_2836 298
111 3300046558 Ga0495633_0023473 Ga0495633_0023473_2040_2936 298
112 3300046665 Ga0495661_0116630 Ga0495661_0116630_424_1320 298
113 3300046809 Ga0495600_0019601 Ga0495600_0019601_1259_2155 298
114 3300047472 Ga0495686_0000055 Ga0495686_0000055_137766_138662 298
115 3300048928 Ga0496125_0063356 Ga0496125_0063356_1063_1959 298
116 3300049583 Ga0501067_0030292 Ga0501067_0030292_1953_2849 298
117 3300049823 Ga0501044_0047000 Ga0501044_0047000_3492_4388 298
118 3300053119 Ga0500595_001361 Ga0500595_001361_8985_9881 298
119 3300053154 Ga0500619_001287 Ga0500619_001287_1255_2151 298
120 3300053735 Ga0500596_002776 Ga0500596_002776_1200_2096 298
121 3300031456 Ga0307513_10074427 Ga0307513_100744272 299
122 3300033180 Ga0307510_10014102 Ga0307510_100141029 299
123 3300046460 Ga0495638_0000261 Ga0495638_0000261_27411_28310 299
124 3300046525 Ga0495663_0004549 Ga0495663_0004549_2702_3601 299
125 3300046616 Ga0495668_0003641 Ga0495668_0003641_3988_4887 299
126 3300046660 Ga0495625_0037565 Ga0495625_0037565_175_1074 299
127 3300047445 Ga0495677_0001943 Ga0495677_0001943_3424_4323 299
128 3300048924 Ga0496121_0049752 Ga0496121_0049752_898_1797 299
129 3300049568 Ga0501031_0244242 Ga0501031_0244242_70_969 299
130 3300049569 Ga0501032_0001932 Ga0501032_0001932_9978_10877 299
131 3300049571 Ga0501034_0001874 Ga0501034_0001874_14479_15378 299
132 3300049572 Ga0501036_0055206 Ga0501036_0055206_2379_3278 299
133 3300049573 Ga0501037_0001836 Ga0501037_0001836_6435_7334 299
134 3300049574 Ga0501038_0016910 Ga0501038_0016910_1887_2786 299
135 3300049575 Ga0501039_0001164 Ga0501039_0001164_7799_8698 299
136 3300049579 Ga0501043_0168536 Ga0501043_0168536_402_1301 299
137 3300049580 Ga0501046_0003034 Ga0501046_0003034_3795_4694 299
138 3300049581 Ga0501047_0005642 Ga0501047_0005642_1999_2898 299
139 3300049583 Ga0501067_0000831 Ga0501067_0000831_8721_9620 299
140 3300049586 Ga0501070_0010898 Ga0501070_0010898_1226_2125 299
141 3300049589 Ga0501073_0006486 Ga0501073_0006486_7036_7935 299
142 3300049742 Ga0501080_0000002 Ga0501080_0000002_56052_56951 299
143 3300049822 Ga0501035_0000089 Ga0501035_0000089_102189_103088 299
144 3300049823 Ga0501044_0000249 Ga0501044_0000249_36400_37299 299
145 3300049824 Ga0501045_0140971 Ga0501045_0140971_773_1672 299
146 3300050491 nmdc:mga00v17_6399_c1 nmdc:mga00v17_6399_c1_1074_1973 299
147 3300053087 Ga0500643_000676 Ga0500643_000676_17863_18762 299
148 3300053134 Ga0500658_0014899 Ga0500658_0014899_418_1317 299
149 3300060353 Ga0501082_0026413 Ga0501082_0026413_2878_3777 299
150 3300001990 JGI24737J22298_10020793 JGI24737J22298_100207932 300
151 3300003762 Ga0055542_1000220 Ga0055542_100022015 300
152 3300003775 Ga0055524_1001195 Ga0055524_10011952 300
153 3300003784 Ga0055534_1000100 Ga0055534_100010054 300
154 3300005339 Ga0070660_100122043 Ga0070660_1001220432 300
155 3300005577 Ga0068857_100001542 Ga0068857_10000154218 300
156 3300005841 Ga0068863_100006008 Ga0068863_10000600813 300
157 3300005983 Ga0081540_1001644 Ga0081540_100164414 300
158 3300005983 Ga0081540_1080689 Ga0081540_10806891 300
159 3300011119 Ga0105246_10049733 Ga0105246_100497331 300
160 3300014325 Ga0163163_10033176 Ga0163163_100331766 300
161 3300025263 Ga0209565_1000076 Ga0209565_100007683 300
162 3300025291 Ga0209675_1000047 Ga0209675_100004783 300
163 3300025294 Ga0209025_1001684 Ga0209025_100168417 300
164 3300025295 Ga0209564_1000756 Ga0209564_100075624 300
165 3300025297 Ga0209758_1020342 Ga0209758_10203423 300
166 3300025925 Ga0207650_10014944 Ga0207650_100149443 300
167 3300026116 Ga0207674_10000065 Ga0207674_1000006539 300
168 3300049568 Ga0501031_0054236 Ga0501031_0054236_812_1714 300
169 3300049570 Ga0501033_0062474 Ga0501033_0062474_632_1534 300
170 3300049571 Ga0501034_0071665 Ga0501034_0071665_869_1771 300
171 3300049573 Ga0501037_0169145 Ga0501037_0169145_554_1456 300
172 3300049574 Ga0501038_0091799 Ga0501038_0091799_1010_1912 300
173 3300049579 Ga0501043_0185324 Ga0501043_0185324_87_989 300
174 3300049581 Ga0501047_0081993 Ga0501047_0081993_1591_2493 300
175 3300049582 Ga0501048_0105141 Ga0501048_0105141_850_1752 300
176 3300049586 Ga0501070_0156323 Ga0501070_0156323_47_949 300
177 3300049679 Ga0501249_000477 Ga0501249_000477_219_1121 300
178 3300049822 Ga0501035_0069233 Ga0501035_0069233_965_1867 300
179 3300049824 Ga0501045_0250896 Ga0501045_0250896_348_1250 300
180 3300053139 Ga0500568_0058301 Ga0500568_0058301_282_1184 300
181 3300005338 Ga0068868_100168882 Ga0068868_1001688822 301
182 3300005347 Ga0070668_100032185 Ga0070668_1000321853 301
183 3300005365 Ga0070688_100295459 Ga0070688_1002954591 301
184 3300005367 Ga0070667_100191535 Ga0070667_1001915352 301
185 3300005456 Ga0070678_100405960 Ga0070678_1004059601 301
186 3300005518 Ga0070699_100343664 Ga0070699_1003436641 301
187 3300005547 Ga0070693_100082770 Ga0070693_1000827702 301
188 3300005840 Ga0068870_10131175 Ga0068870_101311752 301
189 3300006173 Ga0070716_100220117 Ga0070716_1002201172 301
190 3300009093 Ga0105240_10133231 Ga0105240_101332313 301
191 3300009098 Ga0105245_10055477 Ga0105245_100554771 301
192 3300009174 Ga0105241_10053538 Ga0105241_100535382 301
193 3300013297 Ga0157378_10184416 Ga0157378_101844162 301
194 3300013308 Ga0157375_10457504 Ga0157375_104575042 301
195 3300014969 Ga0157376_10133298 Ga0157376_101332982 301
196 3300025941 Ga0207711_10121567 Ga0207711_101215672 301
197 3300025972 Ga0207668_10222884 Ga0207668_102228842 301
198 3300025986 Ga0207658_10159938 Ga0207658_101599382 301
199 3300026088 Ga0207641_10370074 Ga0207641_103700741 301
200 3300028379 Ga0268266_10275951 Ga0268266_102759512 301
201 3300046471 Ga0495650_0067533 Ga0495650_0067533_240_1145 301
202 3300046660 Ga0495625_0000828 Ga0495625_0000828_17235_18140 301
203 3300046660 Ga0495625_0002100 Ga0495625_0002100_8402_9307 301
204 3300048913 Ga0496110_0203125 Ga0496110_0203125_188_1093 301
205 3300048915 Ga0496112_0359341 Ga0496112_0359341_431_1336 301
206 3300048916 Ga0496113_0442532 Ga0496113_0442532_15_920 301
207 3300048921 Ga0496118_0186977 Ga0496118_0186977_164_1069 301
208 3300048928 Ga0496125_0198890 Ga0496125_0198890_125_1030 301
209 3300050512 nmdc:mga0n895_271182_c1 nmdc:mga0n895_271182_c1_553_1458 301
210 3300013307 Ga0157372_10160716 Ga0157372_101607162 302
211 3300025986 Ga0207658_10027353 Ga0207658_100273533 302
212 3300046660 Ga0495625_0230471 Ga0495625_0230471_118_1026 302
213 3300046691 Ga0495670_0000050 Ga0495670_0000050_47579_48487 302
214 3300046694 Ga0495649_0023043 Ga0495649_0023043_1407_2315 302
215 3300001989 JGI24739J22299_10065940 JGI24739J22299_100659401 303
216 3300005331 Ga0070670_100245445 Ga0070670_1002454452 303
217 3300005355 Ga0070671_100000522 Ga0070671_10000052218 303
218 3300005456 Ga0070678_100004717 Ga0070678_1000047179 303
219 3300005459 Ga0068867_100218556 Ga0068867_1002185562 303
220 3300005543 Ga0070672_100124891 Ga0070672_1001248914 303
221 3300005544 Ga0070686_100097207 Ga0070686_1000972072 303
222 3300005548 Ga0070665_100054650 Ga0070665_1000546504 303
223 3300005564 Ga0070664_100353517 Ga0070664_1003535172 303
224 3300005577 Ga0068857_100326404 Ga0068857_1003264042 303
225 3300005615 Ga0070702_100115987 Ga0070702_1001159873 303
226 3300005617 Ga0068859_100034152 Ga0068859_1000341525 303
227 3300005841 Ga0068863_100015613 Ga0068863_1000156135 303
228 3300005842 Ga0068858_100007828 Ga0068858_10000782810 303
229 3300005843 Ga0068860_100012867 Ga0068860_1000128676 303
230 3300006881 Ga0068865_100093029 Ga0068865_1000930292 303
231 3300006931 Ga0097620_100034153 Ga0097620_1000341535 303
232 3300009553 Ga0105249_10328749 Ga0105249_103287492 303
233 3300013308 Ga0157375_10084861 Ga0157375_100848612 303
234 3300014325 Ga0163163_10162226 Ga0163163_101622262 303
235 3300025900 Ga0207710_10000167 Ga0207710_1000016723 303
236 3300025919 Ga0207657_10082490 Ga0207657_100824903 303
237 3300025931 Ga0207644_10001950 Ga0207644_100019504 303
238 3300025933 Ga0207706_10010393 Ga0207706_100103933 303
239 3300025936 Ga0207670_10122925 Ga0207670_101229252 303
240 3300025940 Ga0207691_10023808 Ga0207691_100238086 303
241 3300025941 Ga0207711_10063479 Ga0207711_100634792 303
242 3300025960 Ga0207651_10101252 Ga0207651_101012521 303
243 3300025972 Ga0207668_10109866 Ga0207668_101098663 303
244 3300025986 Ga0207658_10105614 Ga0207658_101056142 303
245 3300026035 Ga0207703_10003573 Ga0207703_1000357313 303
246 3300026075 Ga0207708_10015147 Ga0207708_100151474 303
247 3300026088 Ga0207641_10004036 Ga0207641_1000403613 303
248 3300026089 Ga0207648_10015330 Ga0207648_100153307 303
249 3300026116 Ga0207674_10134630 Ga0207674_101346302 303
250 3300026118 Ga0207675_100011683 Ga0207675_1000116838 303
251 3300026121 Ga0207683_10031210 Ga0207683_100312103 303
252 3300027666 Ga0209282_1000010 Ga0209282_100001059 303
253 3300028380 Ga0268265_10038907 Ga0268265_100389073 303
254 3300028381 Ga0268264_10025218 Ga0268264_100252183 303
255 3300031824 Ga0307413_10094268 Ga0307413_100942682 303
256 3300031852 Ga0307410_10315476 Ga0307410_103154762 303
257 3300031903 Ga0307407_10035038 Ga0307407_100350381 303
258 3300031995 Ga0307409_100148292 Ga0307409_1001482921 303
259 3300032004 Ga0307414_10295069 Ga0307414_102950691 303
260 3300032005 Ga0307411_10142428 Ga0307411_101424281 303
261 3300032126 Ga0307415_100332454 Ga0307415_1003324542 303
262 3300037471 Ga0395905_0260025 Ga0395905_0260025_397_1308 303
263 3300046523 Ga0495644_0024468 Ga0495644_0024468_960_1871 303
264 3300046684 Ga0495669_0002409 Ga0495669_0002409_5483_6394 303
265 3300047445 Ga0495677_0108670 Ga0495677_0108670_68_979 303
266 3300048905 Ga0496102_0012799 Ga0496102_0012799_5407_6447 303
267 3300048909 Ga0496106_0298773 Ga0496106_0298773_275_1186 303
268 3300048910 Ga0496107_0049532 Ga0496107_0049532_11_922 303
269 3300048922 Ga0496119_0156352 Ga0496119_0156352_78_1118 303
270 3300048924 Ga0496121_0001021 Ga0496121_0001021_45386_46426 303
271 3300048928 Ga0496125_0023133 Ga0496125_0023133_4082_5122 303
272 3300049581 Ga0501047_0061905 Ga0501047_0061905_1674_2594 303
273 3300003759 Ga0055525_1000043 Ga0055525_1000043176 304
274 3300003762 Ga0055542_1000053 Ga0055542_100005361 304
275 3300005616 Ga0068852_100001983 Ga0068852_1000019832 304
276 3300025299 Ga0209256_1000453 Ga0209256_100045336 304
277 3300026142 Ga0207698_10002302 Ga0207698_100023022 304
278 3300037312 Ga0395899_0002227 Ga0395899_0002227_8862_9776 304
279 3300037312 Ga0395899_0242297 Ga0395899_0242297_49_963 304
280 3300037418 Ga0395900_0013290 Ga0395900_0013290_6569_7483 304
281 3300037418 Ga0395900_0280718 Ga0395900_0280718_267_1256 304
282 3300037466 Ga0395898_0020493 Ga0395898_0020493_5309_6223 304
283 3300037471 Ga0395905_0010646 Ga0395905_0010646_6176_7090 304
284 3300038443 Ga0395901_0005992 Ga0395901_0005992_6176_7090 304
285 3300038443 Ga0395901_0294169 Ga0395901_0294169_280_1269 304
286 3300044684 Ga0466966_0048433 Ga0466966_0048433_1525_2448 304
287 3300044842 Ga0466957_0110922 Ga0466957_0110922_547_1470 304
288 3300045049 Ga0466959_0094809 Ga0466959_0094809_964_1887 304
289 3300045976 Ga0466967_0037040 Ga0466967_0037040_2354_3283 304
290 3300046474 Ga0495605_0015784 Ga0495605_0015784_2411_3346 304
291 3300046810 Ga0495660_0038975 Ga0495660_0038975_63_983 304
292 3300047320 Ga0495672_0000198 Ga0495672_0000198_28875_29795 304
293 3300047472 Ga0495686_0077122 Ga0495686_0077122_980_1900 304
294 3300001904 JGI24736J21556_1001723 JGI24736J21556_10017232 305
295 3300001990 JGI24737J22298_10026820 JGI24737J22298_100268202 305
296 3300003320 rootH2_10180370 rootH2_101803702 305
297 3300005457 Ga0070662_100086826 Ga0070662_1000868262 305
298 3300013105 Ga0157369_10205622 Ga0157369_102056221 305
299 3300025904 Ga0207647_10001170 Ga0207647_1000117019 305
300 3300025932 Ga0207690_10051669 Ga0207690_100516694 305
301 3300025933 Ga0207706_10097082 Ga0207706_100970823 305
302 3300042005 Ga0439448_0035315 Ga0439448_0035315_297_1214 305
303 3300042012 Ga0439455_0002240 Ga0439455_0002240_1912_2829 305
304 3300042157 Ga0439458_0002756 Ga0439458_0002756_441_1358 305
305 3300042157 Ga0439458_0041421 Ga0439458_0041421_31_948 305

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

62

121

0.97

PF03466

LysR_substrate

LysR substrate binding domain

143

351

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ihs-assembly1.cif.gz_A crystal structure of benm_dbd/catb site 1 dna complex 0.9572 1 82
4iht-assembly2.cif.gz_C crystal structure of benm_dbd/bena site 1 dna complex 0.9485 1 82
4iht-assembly1.cif.gz_A crystal structure of benm_dbd/bena site 1 dna complex 0.9484 1 82
5z4y-assembly1.cif.gz_B crystal structure of pacysb ntd domain with space group p4 0.9341 3 80
4ihs-assembly1.cif.gz_B crystal structure of benm_dbd/catb site 1 dna complex 0.9194 1 84
ID Description Score Start End Superfamily
af_P30864_1_87_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9821 4 82 1.10.10.10
af_P0ACR7_1_84_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9815 5 80 1.10.10.10
af_P77700_7_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9795 5 85 1.10.10.10
af_P37641_3_87_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9745 3 85 1.10.10.10
af_P67662_3_85_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.974 3 80 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A242M2C6-F1-model_v4 Putative transcription regulator protein of MDR efflux pump cluster 0.9809 162 264 GO:0003700
GO:0006351
GO:0043565
AF-A0A258CPL3-F1-model_v4 LysR family transcriptional regulator 0.974 1 80 GO:0003700
GO:0006351
GO:0043565
AF-A0A242M2C6-F1-model_v4 Putative transcription regulator protein of MDR efflux pump cluster 0.9536 162 264 GO:0003700
GO:0006351
GO:0043565
AF-A0A7H0HCT6-F1-model_v4 LysR family transcriptional regulator 0.9509 1 293 GO:0003700
GO:0006351
GO:0043565
AF-A0A4Q5XXI8-F1-model_v4 deleted 0.9446 105 293

Feature Viewer

pLDDT pTM Quality
87.96 0.72 High
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Predicted Structure (AlphaFold2)

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Map