F398047

General Info

Members Datasets Scaffolds Average Seq Length
305 207 610 162

Family's Representative Sequence

Representative Sequence 3300006038|Ga0075365_10096333|Ga0075365_100963332
Length 157
Sequence MTSPDDLSHRFEVESVERTLALVGERWTFVVLREIFLGVRRFGQIARNLNIPRPTLAARLRSLVENGLLVRVPYGQSAERFEYRLTESGRDLFPAVVTLMQWGDKHLPVPQGPPLVLRHKSCGHIAEARLVCSQCDEELTARNVTPEPGPGFGGAQE

Samples

Sample ID Description Type Environment
1 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
67 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
105 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
106 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
107 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
108 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
109 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
110 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
117 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
118 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
119 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
120 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
123 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
124 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
127 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
128 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
129 3300042118 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_082316_2156 Metagenome Rhizosphere
130 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
131 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
132 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
133 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
134 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
135 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
136 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
137 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
138 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
139 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
140 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
141 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
142 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
143 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
144 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
145 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
146 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
147 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
148 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
149 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
150 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
151 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
152 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
153 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
154 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
155 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
156 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
157 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
158 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
161 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
162 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
163 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
164 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
165 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
166 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
172 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
173 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
174 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
175 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
176 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
177 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
178 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
179 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
180 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
181 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
182 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
184 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
185 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
186 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
187 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
188 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
189 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
190 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
191 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
192 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
193 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
194 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
195 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
196 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
197 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
198 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
199 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
200 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
201 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
202 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
203 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
204 2643221604 Nocardioides sp. Root190 Isolate Unclassified
205 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
206 2739367898 Nocardioides sp. CF479 Isolate Unclassified
207 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.69
Metatranscriptomes 0
Isolates 1.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.84
Nodule 0.33
Rhizoplane 15.41
Rhizosphere 71.48
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075365_10096333 3300006038 Bacteria 2022
2 JGI24740J21852_10016215 3300001979 Bacteria 2697
3 JGI24735J21928_10006055 3300002067 Bacteria 3996
4 Ga0070658_10005815 3300005327 Bacteria 9994
5 Ga0070683_100001861 3300005329 Bacteria 16469
6 Ga0070683_100632103 3300005329 Bacteria 1025
7 Ga0068869_101301248 3300005334 Bacteria 641
8 Ga0070680_100419834 3300005336 Bacteria 1141
9 Ga0070682_100019351 3300005337 Bacteria 3994
10 Ga0070682_100373012 3300005337 Bacteria 1071
11 Ga0070660_100031849 3300005339 Bacteria 3964
12 Ga0070660_100052917 3300005339 Bacteria 3131
13 Ga0070668_100072217 3300005347 Bacteria 2689
14 Ga0070675_100388525 3300005354 Bacteria 1243
15 Ga0070675_100513112 3300005354 Bacteria 1081
16 Ga0070671_100617683 3300005355 Bacteria 937
17 Ga0070688_101374849 3300005365 Bacteria 572
18 Ga0070659_100016730 3300005366 Bacteria 5510
19 Ga0070667_100116269 3300005367 Bacteria 2323
20 Ga0070709_11503631 3300005434 Bacteria 547
21 Ga0070705_100502972 3300005440 Bacteria 920
22 Ga0070708_100490569 3300005445 Bacteria 1159
23 Ga0070678_100220850 3300005456 Bacteria 1575
24 Ga0068867_100654364 3300005459 Bacteria 922
25 Ga0070698_100006759 3300005471 Bacteria 12435
26 Ga0070679_100003198 3300005530 Bacteria 14961
27 Ga0070684_100030883 3300005535 Bacteria 4556
28 Ga0070684_101588200 3300005535 Bacteria 617
29 Ga0068853_100221254 3300005539 Bacteria 1729
30 Ga0070686_100055298 3300005544 Bacteria 2542
31 Ga0070665_100001068 3300005548 Bacteria 34157
32 Ga0070665_101168094 3300005548 Bacteria 781
33 Ga0068857_100003902 3300005577 Bacteria 12553
34 Ga0068857_100056412 3300005577 Bacteria 3486
35 Ga0068857_100183572 3300005577 Bacteria 1904
36 Ga0070702_100008036 3300005615 Bacteria 5090
37 Ga0070702_100797148 3300005615 Bacteria 730
38 Ga0068864_100025089 3300005618 Bacteria 5018
39 Ga0068864_100123546 3300005618 Bacteria 2317
40 Ga0068861_101971000 3300005719 Bacteria 582
41 Ga0068851_10141631 3300005834 Bacteria 1308
42 Ga0068863_100226414 3300005841 Bacteria 1803
43 Ga0068858_100189658 3300005842 Bacteria 1942
44 Ga0068858_100351616 3300005842 Bacteria 1411
45 Ga0075365_10072851 3300006038 Bacteria 2314
46 Ga0075365_10228001 3300006038 Bacteria 1307
47 Ga0075365_10769847 3300006038 Bacteria 680
48 Ga0075368_10174481 3300006042 Bacteria 904
49 Ga0075363_100156061 3300006048 Bacteria 1290
50 Ga0075363_100212297 3300006048 Bacteria 1108
51 Ga0075363_100228048 3300006048 Bacteria 1069
52 Ga0075364_10092907 3300006051 Bacteria 2003
53 Ga0075364_10186947 3300006051 Bacteria 1403
54 Ga0075364_10210734 3300006051 Bacteria 1318
55 Ga0075364_10293485 3300006051 Bacteria 1107
56 Ga0070716_100040322 3300006173 Bacteria 2597
57 Ga0070712_100188516 3300006175 Bacteria 1612
58 Ga0075367_10046935 3300006178 Bacteria 2539
59 Ga0075369_10033351 3300006186 Bacteria 2182
60 Ga0097621_100614943 3300006237 Bacteria 994
61 Ga0075370_10335983 3300006353 Bacteria 901
62 Ga0075428_100000138 3300006844 Bacteria 64487
63 Ga0075429_100073364 3300006880 Bacteria 2981
64 Ga0097620_101963511 3300006931 Bacteria 646
65 Ga0111539_12815723 3300009094 Bacteria 563
66 Ga0105245_10006642 3300009098 Bacteria 10156
67 Ga0105247_10141184 3300009101 Bacteria 1579
68 Ga0114129_10000031 3300009147 Bacteria 111827
69 Ga0114129_12132466 3300009147 Bacteria 675
70 Ga0114129_12862159 3300009147 Bacteria 572
71 Ga0105243_10108760 3300009148 Bacteria 2315
72 Ga0105242_10036806 3300009176 Bacteria 3928
73 Ga0105248_10062589 3300009177 Bacteria 4178
74 Ga0105248_10081472 3300009177 Bacteria 3638
75 Ga0105237_10251835 3300009545 Bacteria 1768
76 Ga0105238_11253033 3300009551 Bacteria 767
77 Ga0105249_10150886 3300009553 Bacteria 2237
78 Ga0105249_11282413 3300009553 Bacteria 804
79 Ga0105249_12008033 3300009553 Bacteria 651
80 Ga0105239_10003376 3300010375 Bacteria 19591
81 Ga0105239_10866403 3300010375 Bacteria 1036
82 Ga0105246_10002128 3300011119 Bacteria 11936
83 Ga0105246_10060945 3300011119 Bacteria 2623
84 Ga0157373_10223513 3300013100 Bacteria 1329
85 Ga0157370_10594847 3300013104 Bacteria 1013
86 Ga0157369_10018372 3300013105 Bacteria 7840
87 Ga0163162_10004012 3300013306 Bacteria 14126
88 Ga0163162_10516766 3300013306 Bacteria 1324
89 Ga0163162_12732876 3300013306 Bacteria 568
90 Ga0157372_10003758 3300013307 Bacteria 16307
91 Ga0157372_10708462 3300013307 Bacteria 1171
92 Ga0157372_10735672 3300013307 Bacteria 1147
93 Ga0157375_10082368 3300013308 Bacteria 3259
94 Ga0157375_10124951 3300013308 Bacteria 2686
95 Ga0157375_10680887 3300013308 Bacteria 1183
96 Ga0163163_10009407 3300014325 Bacteria 8724
97 Ga0163163_10013759 3300014325 Bacteria 7416
98 Ga0157380_10113951 3300014326 Bacteria 2278
99 Ga0182008_10070111 3300014497 Bacteria 1724
100 Ga0182008_10089102 3300014497 Bacteria 1520
101 Ga0157377_10178614 3300014745 Bacteria 1333
102 Ga0157379_10014796 3300014968 Bacteria 6841
103 Ga0157379_10084618 3300014968 Bacteria 2842
104 Ga0157376_10190711 3300014969 Bacteria 1879
105 Ga0157376_12111533 3300014969 Bacteria 602
106 Ga0182007_10139398 3300015262 Bacteria 819
107 Ga0163161_10290728 3300017792 Bacteria 1284
108 Ga0207656_10124304 3300025321 Bacteria 1204
109 Ga0207647_10069840 3300025904 Bacteria 2123
110 Ga0207699_10679209 3300025906 Bacteria 753
111 Ga0207705_10063658 3300025909 Bacteria 2665
112 Ga0207705_10091377 3300025909 Bacteria 2229
113 Ga0207654_10803213 3300025911 Bacteria 679
114 Ga0207671_10162631 3300025914 Bacteria 1729
115 Ga0207693_10464347 3300025915 Bacteria 989
116 Ga0207660_10404527 3300025917 Bacteria 1100
117 Ga0207662_10075809 3300025918 Bacteria 2044
118 Ga0207657_10048895 3300025919 Bacteria 3689
119 Ga0207657_10064283 3300025919 Bacteria 3132
120 Ga0207652_10056106 3300025921 Bacteria 3390
121 Ga0207659_10601224 3300025926 Bacteria 938
122 Ga0207687_10006654 3300025927 Bacteria 7624
123 Ga0207687_11017050 3300025927 Bacteria 711
124 Ga0207664_11307733 3300025929 Bacteria 645
125 Ga0207690_10127333 3300025932 Bacteria 1859
126 Ga0207706_11299632 3300025933 Bacteria 601
127 Ga0207686_10309596 3300025934 Bacteria 1176
128 Ga0207686_10342745 3300025934 Bacteria 1123
129 Ga0207709_10061499 3300025935 Bacteria 2347
130 Ga0207704_10139715 3300025938 Bacteria 1692
131 Ga0207704_10340783 3300025938 Bacteria 1164
132 Ga0207704_10909270 3300025938 Bacteria 740
133 Ga0207711_10103456 3300025941 Bacteria 2522
134 Ga0207711_10273586 3300025941 Bacteria 1554
135 Ga0207661_10038863 3300025944 Bacteria 3732
136 Ga0207668_10169939 3300025972 Bacteria 1709
137 Ga0207703_10035706 3300026035 Bacteria 3951
138 Ga0207639_10271066 3300026041 Bacteria 1489
139 Ga0207678_10938818 3300026067 Bacteria 765
140 Ga0207702_10438940 3300026078 Bacteria 1265
141 Ga0207641_10417977 3300026088 Bacteria 1290
142 Ga0207676_10128584 3300026095 Bacteria 2150
143 Ga0207676_10342066 3300026095 Bacteria 1381
144 Ga0207676_10352957 3300026095 Bacteria 1360
145 Ga0207676_11315765 3300026095 Bacteria 718
146 Ga0207674_10024834 3300026116 Bacteria 6397
147 Ga0207674_10045378 3300026116 Bacteria 4521
148 Ga0207674_10104910 3300026116 Bacteria 2804
149 Ga0207698_11624791 3300026142 Bacteria 662
150 Ga0268266_10001656 3300028379 Bacteria 25750
151 Ga0307515_10013838 3300028794 Bacteria 15030
152 Ga0307512_10006568 3300030522 Bacteria 11752
153 Ga0307512_10028662 3300030522 Bacteria 4877
154 Ga0314311_1172421 3300030733 Bacteria 617
155 Ga0307513_10036859 3300031456 Bacteria 5447
156 Ga0307508_10008441 3300031616 Bacteria 9514
157 Ga0307514_10234716 3300031649 Bacteria 1107
158 Ga0307410_10035661 3300031852 Bacteria 3233
159 Ga0326468_10000283 3300031889 Bacteria 5393
160 Ga0307406_11505169 3300031901 Bacteria 592
161 Ga0307407_10190992 3300031903 Bacteria 1365
162 Ga0307412_10283508 3300031911 Bacteria 1302
163 Ga0307409_100075554 3300031995 Bacteria 2698
164 Ga0307416_100398225 3300032002 Bacteria 1413
165 Ga0307414_11206073 3300032004 Bacteria 701
166 Ga0307414_11529220 3300032004 Bacteria 621
167 Ga0307415_100162992 3300032126 Bacteria 1730
168 Ga0307510_10459058 3300033180 Bacteria 715
169 Ga0373943_0199437 3300035170 Bacteria 1107
170 Ga0373962_0001248 3300035242 Bacteria 5964
171 Ga0373925_0593393 3300037068 Bacteria 912
172 Ga0395899_0082824 3300037312 Bacteria 2333
173 Ga0395900_0369966 3300037418 Bacteria 1403
174 Ga0395898_0048179 3300037466 Bacteria 4180
175 Ga0395901_0063941 3300038443 Bacteria 3829
176 Ga0451797_1429244 3300041453 Bacteria 950
177 Ga0451797_1567274 3300041453 Bacteria 1206
178 Ga0439433_0015025 3300041999 Bacteria 1709
179 Ga0439463_010370 3300042016 Bacteria 2291
180 Ga0450914_014937 3300042118 Bacteria 807
181 Ga0450902_043978 3300042137 Bacteria 762
182 Ga0450909_030998 3300042185 Bacteria 812
183 Ga0466969_0189010 3300044656 Bacteria 941
184 Ga0466966_0227154 3300044684 Bacteria 1126
185 Ga0466961_0017462 3300044693 Bacteria 4610
186 Ga0466963_0348435 3300044694 Bacteria 1043
187 Ga0466971_0331317 3300044719 Bacteria 734
188 Ga0466959_0049623 3300045049 Bacteria 3083
189 Ga0451576_1736659 3300045051 Bacteria 646
190 Ga0466958_0016247 3300045836 Bacteria 4282
191 Ga0466967_0042231 3300045976 Bacteria 3938
192 Ga0466967_0214113 3300045976 Bacteria 1828
193 Ga0495629_0043789 3300046459 Bacteria 3143
194 Ga0495641_0119708 3300046461 Bacteria 1175
195 Ga0495582_0409421 3300046473 Bacteria 782
196 Ga0495639_0119359 3300046475 Bacteria 1257
197 Ga0495630_0229519 3300046517 Bacteria 1418
198 Ga0495656_0195334 3300046615 Bacteria 1002
199 Ga0495588_0668870 3300046674 Bacteria 543
200 Ga0495658_0101501 3300046683 Bacteria 1718
201 Ga0495593_0096106 3300047673 Bacteria 1523
202 Ga0496100_0291182 3300048903 Bacteria 1220
203 Ga0496100_0512268 3300048903 Bacteria 925
204 Ga0496100_1135848 3300048903 Bacteria 616
205 Ga0496101_0042045 3300048904 Bacteria 3262
206 Ga0496101_0164935 3300048904 Bacteria 1701
207 Ga0496101_0264019 3300048904 Bacteria 1343
208 Ga0496101_0343667 3300048904 Bacteria 1172
209 Ga0496101_0748458 3300048904 Bacteria 771
210 Ga0496102_0050032 3300048905 Bacteria 3804
211 Ga0496102_0093252 3300048905 Bacteria 2789
212 Ga0496102_0803643 3300048905 Bacteria 863
213 Ga0496103_0129221 3300048906 Bacteria 1613
214 Ga0496103_0130912 3300048906 Bacteria 1602
215 Ga0496104_0062338 3300048907 Bacteria 3535
216 Ga0496105_0003762 3300048908 Bacteria 11305
217 Ga0496105_1260633 3300048908 Bacteria 541
218 Ga0496106_0186027 3300048909 Bacteria 1650
219 Ga0496106_0376055 3300048909 Bacteria 1142
220 Ga0496107_0113307 3300048910 Bacteria 1994
221 Ga0496107_0183944 3300048910 Bacteria 1552
222 Ga0496107_0558393 3300048910 Bacteria 848
223 Ga0496107_0706388 3300048910 Bacteria 741
224 Ga0496107_0752041 3300048910 Bacteria 715
225 Ga0496108_0026998 3300048911 Bacteria 4738
226 Ga0496108_0198869 3300048911 Bacteria 1739
227 Ga0496108_0234106 3300048911 Bacteria 1597
228 Ga0496108_0319796 3300048911 Bacteria 1353
229 Ga0496109_0060108 3300048912 Bacteria 3472
230 Ga0496109_0077999 3300048912 Bacteria 3049
231 Ga0496109_0273939 3300048912 Bacteria 1590
232 Ga0496109_0280400 3300048912 Bacteria 1571
233 Ga0496109_0670316 3300048912 Bacteria 974
234 Ga0496110_0008683 3300048913 Bacteria 8182
235 Ga0496110_0018206 3300048913 Bacteria 5886
236 Ga0496111_0010379 3300048914 Bacteria 6247
237 Ga0496112_0014275 3300048915 Bacteria 7360
238 Ga0496112_0140552 3300048915 Bacteria 2384
239 Ga0496112_0615574 3300048915 Bacteria 1017
240 Ga0496112_1172767 3300048915 Bacteria 685
241 Ga0496113_0450714 3300048916 Bacteria 1034
242 Ga0496113_0557747 3300048916 Bacteria 919
243 Ga0496114_0039229 3300048917 Bacteria 3918
244 Ga0496114_0336048 3300048917 Bacteria 1335
245 Ga0496114_1072026 3300048917 Bacteria 690
246 Ga0496115_0066499 3300048918 Bacteria 2913
247 Ga0501034_0012778 3300049571 Bacteria 8660
248 Ga0501034_0052856 3300049571 Bacteria 4092
249 Ga0501036_0346253 3300049572 Bacteria 1241
250 Ga0501037_0173666 3300049573 Bacteria 1531
251 Ga0501042_0160539 3300049578 Bacteria 1622
252 Ga0501047_0118166 3300049581 Bacteria 2533
253 Ga0501067_0004866 3300049583 Bacteria 7456
254 Ga0501067_0032123 3300049583 Bacteria 2913
255 Ga0501068_0003172 3300049584 Bacteria 8803
256 Ga0501068_0042055 3300049584 Bacteria 2747
257 Ga0501069_0039840 3300049585 Bacteria 2596
258 Ga0501069_0194521 3300049585 Bacteria 1174
259 Ga0501070_0006686 3300049586 Bacteria 9821
260 Ga0501070_0069597 3300049586 Bacteria 2913
261 Ga0501070_0179832 3300049586 Bacteria 1741
262 Ga0501071_0018421 3300049587 Bacteria 4834
263 Ga0501072_0011081 3300049588 Bacteria 6880
264 Ga0501072_0099040 3300049588 Bacteria 2317
265 Ga0501073_0005498 3300049589 Bacteria 9493
266 Ga0501073_0073611 3300049589 Bacteria 2378
267 Ga0501074_0002349 3300049590 Bacteria 13163
268 Ga0501074_0006132 3300049590 Bacteria 8680
269 Ga0501079_0192157 3300049741 Bacteria 1593
270 Ga0501080_0004098 3300049742 Bacteria 12917
271 Ga0501080_0009610 3300049742 Bacteria 8828
272 Ga0501083_0031773 3300049744 Bacteria 3623
273 Ga0501083_0091073 3300049744 Bacteria 2013
274 Ga0501035_0260285 3300049822 Bacteria 1471
275 Ga0501044_1057466 3300049823 Bacteria 682
276 nmdc:mga03683_89801_c1 3300050489 Bacteria 1338
277 nmdc:mga03n38_341518_c1 3300050490 Bacteria 813
278 nmdc:mga00v17_222451_c1 3300050491 Bacteria 1222
279 nmdc:mga00v17_84943_c1 3300050491 Bacteria 1982
280 nmdc:mga0yw44_231613_c1 3300050492 Bacteria 1226
281 nmdc:mga0yw44_44106_c1 3300050492 Bacteria 2666
282 nmdc:mga0yw44_93514_c1 3300050492 Bacteria 1904
283 nmdc:mga05p37_1558876_c1 3300050507 Bacteria 654
284 nmdc:mga06r32_12095_c1 3300050510 Bacteria 7782
285 nmdc:mga06r32_343490_c1 3300050510 Bacteria 1477
286 nmdc:mga0rr50_783832_c1 3300050513 Bacteria 813
287 Ga0495619_0304938 3300053085 Bacteria 1103
288 Ga0495619_0963960 3300053085 Bacteria 572
289 Ga0500651_0095532 3300053093 Bacteria 1827
290 Ga0500641_0051660 3300053096 Bacteria 1692
291 Ga0500650_0109774 3300053098 Bacteria 1288
292 Ga0500569_024913 3300053109 Bacteria 1623
293 Ga0500621_114908 3300053126 Bacteria 1048
294 Ga0500652_303007 3300053131 Bacteria 618
295 Ga0500573_0087786 3300053140 Bacteria 1760
296 Ga0500633_0079592 3300053160 Bacteria 1184
297 Ga0501084_0003775 3300054114 Bacteria 12314
298 Ga0501084_0863335 3300054114 Bacteria 761
299 Ga0501082_0195949 3300060353 Bacteria 1757
300 Ga0466962_0056902 3300061719 Bacteria 1867
301 Ga0530510_0353573 3300061734 Bacteria 1104
302 2644033881 2643221604 Bacteria 5014917
303 2676487297 2675903059 Bacteria 8644972
304 2740166534 2739367898 Bacteria 4367674
305 8054610530 8054609563 Bacteria 5170090
306 Ga0075365_10096333
307 JGI24740J21852_10016215
308 JGI24735J21928_10006055
309 Ga0070658_10005815
310 Ga0070683_100001861
311 Ga0070683_100632103
312 Ga0068869_101301248
313 Ga0070680_100419834
314 Ga0070682_100019351
315 Ga0070682_100373012
316 Ga0070660_100031849
317 Ga0070660_100052917
318 Ga0070668_100072217
319 Ga0070675_100388525
320 Ga0070675_100513112
321 Ga0070671_100617683
322 Ga0070688_101374849
323 Ga0070659_100016730
324 Ga0070667_100116269
325 Ga0070709_11503631
326 Ga0070705_100502972
327 Ga0070708_100490569
328 Ga0070678_100220850
329 Ga0068867_100654364
330 Ga0070698_100006759
331 Ga0070679_100003198
332 Ga0070684_100030883
333 Ga0070684_101588200
334 Ga0068853_100221254
335 Ga0070686_100055298
336 Ga0070665_100001068
337 Ga0070665_101168094
338 Ga0068857_100003902
339 Ga0068857_100056412
340 Ga0068857_100183572
341 Ga0070702_100008036
342 Ga0070702_100797148
343 Ga0068864_100025089
344 Ga0068864_100123546
345 Ga0068861_101971000
346 Ga0068851_10141631
347 Ga0068863_100226414
348 Ga0068858_100189658
349 Ga0068858_100351616
350 Ga0075365_10072851
351 Ga0075365_10228001
352 Ga0075365_10769847
353 Ga0075368_10174481
354 Ga0075363_100156061
355 Ga0075363_100212297
356 Ga0075363_100228048
357 Ga0075364_10092907
358 Ga0075364_10186947
359 Ga0075364_10210734
360 Ga0075364_10293485
361 Ga0070716_100040322
362 Ga0070712_100188516
363 Ga0075367_10046935
364 Ga0075369_10033351
365 Ga0097621_100614943
366 Ga0075370_10335983
367 Ga0075428_100000138
368 Ga0075429_100073364
369 Ga0097620_101963511
370 Ga0111539_12815723
371 Ga0105245_10006642
372 Ga0105247_10141184
373 Ga0114129_10000031
374 Ga0114129_12132466
375 Ga0114129_12862159
376 Ga0105243_10108760
377 Ga0105242_10036806
378 Ga0105248_10062589
379 Ga0105248_10081472
380 Ga0105237_10251835
381 Ga0105238_11253033
382 Ga0105249_10150886
383 Ga0105249_11282413
384 Ga0105249_12008033
385 Ga0105239_10003376
386 Ga0105239_10866403
387 Ga0105246_10002128
388 Ga0105246_10060945
389 Ga0157373_10223513
390 Ga0157370_10594847
391 Ga0157369_10018372
392 Ga0163162_10004012
393 Ga0163162_10516766
394 Ga0163162_12732876
395 Ga0157372_10003758
396 Ga0157372_10708462
397 Ga0157372_10735672
398 Ga0157375_10082368
399 Ga0157375_10124951
400 Ga0157375_10680887
401 Ga0163163_10009407
402 Ga0163163_10013759
403 Ga0157380_10113951
404 Ga0182008_10070111
405 Ga0182008_10089102
406 Ga0157377_10178614
407 Ga0157379_10014796
408 Ga0157379_10084618
409 Ga0157376_10190711
410 Ga0157376_12111533
411 Ga0182007_10139398
412 Ga0163161_10290728
413 Ga0207656_10124304
414 Ga0207647_10069840
415 Ga0207699_10679209
416 Ga0207705_10063658
417 Ga0207705_10091377
418 Ga0207654_10803213
419 Ga0207671_10162631
420 Ga0207693_10464347
421 Ga0207660_10404527
422 Ga0207662_10075809
423 Ga0207657_10048895
424 Ga0207657_10064283
425 Ga0207652_10056106
426 Ga0207659_10601224
427 Ga0207687_10006654
428 Ga0207687_11017050
429 Ga0207664_11307733
430 Ga0207690_10127333
431 Ga0207706_11299632
432 Ga0207686_10309596
433 Ga0207686_10342745
434 Ga0207709_10061499
435 Ga0207704_10139715
436 Ga0207704_10340783
437 Ga0207704_10909270
438 Ga0207711_10103456
439 Ga0207711_10273586
440 Ga0207661_10038863
441 Ga0207668_10169939
442 Ga0207703_10035706
443 Ga0207639_10271066
444 Ga0207678_10938818
445 Ga0207702_10438940
446 Ga0207641_10417977
447 Ga0207676_10128584
448 Ga0207676_10342066
449 Ga0207676_10352957
450 Ga0207676_11315765
451 Ga0207674_10024834
452 Ga0207674_10045378
453 Ga0207674_10104910
454 Ga0207698_11624791
455 Ga0268266_10001656
456 Ga0307515_10013838
457 Ga0307512_10006568
458 Ga0307512_10028662
459 Ga0314311_1172421
460 Ga0307513_10036859
461 Ga0307508_10008441
462 Ga0307514_10234716
463 Ga0307410_10035661
464 Ga0326468_10000283
465 Ga0307406_11505169
466 Ga0307407_10190992
467 Ga0307412_10283508
468 Ga0307409_100075554
469 Ga0307416_100398225
470 Ga0307414_11206073
471 Ga0307414_11529220
472 Ga0307415_100162992
473 Ga0307510_10459058
474 Ga0373943_0199437
475 Ga0373962_0001248
476 Ga0373925_0593393
477 Ga0395899_0082824
478 Ga0395900_0369966
479 Ga0395898_0048179
480 Ga0395901_0063941
481 Ga0451797_1429244
482 Ga0451797_1567274
483 Ga0439433_0015025
484 Ga0439463_010370
485 Ga0450914_014937
486 Ga0450902_043978
487 Ga0450909_030998
488 Ga0466969_0189010
489 Ga0466966_0227154
490 Ga0466961_0017462
491 Ga0466963_0348435
492 Ga0466971_0331317
493 Ga0466959_0049623
494 Ga0451576_1736659
495 Ga0466958_0016247
496 Ga0466967_0042231
497 Ga0466967_0214113
498 Ga0495629_0043789
499 Ga0495641_0119708
500 Ga0495582_0409421
501 Ga0495639_0119359
502 Ga0495630_0229519
503 Ga0495656_0195334
504 Ga0495588_0668870
505 Ga0495658_0101501
506 Ga0495593_0096106
507 Ga0496100_0291182
508 Ga0496100_0512268
509 Ga0496100_1135848
510 Ga0496101_0042045
511 Ga0496101_0164935
512 Ga0496101_0264019
513 Ga0496101_0343667
514 Ga0496101_0748458
515 Ga0496102_0050032
516 Ga0496102_0093252
517 Ga0496102_0803643
518 Ga0496103_0129221
519 Ga0496103_0130912
520 Ga0496104_0062338
521 Ga0496105_0003762
522 Ga0496105_1260633
523 Ga0496106_0186027
524 Ga0496106_0376055
525 Ga0496107_0113307
526 Ga0496107_0183944
527 Ga0496107_0558393
528 Ga0496107_0706388
529 Ga0496107_0752041
530 Ga0496108_0026998
531 Ga0496108_0198869
532 Ga0496108_0234106
533 Ga0496108_0319796
534 Ga0496109_0060108
535 Ga0496109_0077999
536 Ga0496109_0273939
537 Ga0496109_0280400
538 Ga0496109_0670316
539 Ga0496110_0008683
540 Ga0496110_0018206
541 Ga0496111_0010379
542 Ga0496112_0014275
543 Ga0496112_0140552
544 Ga0496112_0615574
545 Ga0496112_1172767
546 Ga0496113_0450714
547 Ga0496113_0557747
548 Ga0496114_0039229
549 Ga0496114_0336048
550 Ga0496114_1072026
551 Ga0496115_0066499
552 Ga0501034_0012778
553 Ga0501034_0052856
554 Ga0501036_0346253
555 Ga0501037_0173666
556 Ga0501042_0160539
557 Ga0501047_0118166
558 Ga0501067_0004866
559 Ga0501067_0032123
560 Ga0501068_0003172
561 Ga0501068_0042055
562 Ga0501069_0039840
563 Ga0501069_0194521
564 Ga0501070_0006686
565 Ga0501070_0069597
566 Ga0501070_0179832
567 Ga0501071_0018421
568 Ga0501072_0011081
569 Ga0501072_0099040
570 Ga0501073_0005498
571 Ga0501073_0073611
572 Ga0501074_0002349
573 Ga0501074_0006132
574 Ga0501079_0192157
575 Ga0501080_0004098
576 Ga0501080_0009610
577 Ga0501083_0031773
578 Ga0501083_0091073
579 Ga0501035_0260285
580 Ga0501044_1057466
581 nmdc:mga03683_89801_c1
582 nmdc:mga03n38_341518_c1
583 nmdc:mga00v17_222451_c1
584 nmdc:mga00v17_84943_c1
585 nmdc:mga0yw44_231613_c1
586 nmdc:mga0yw44_44106_c1
587 nmdc:mga0yw44_93514_c1
588 nmdc:mga05p37_1558876_c1
589 nmdc:mga06r32_12095_c1
590 nmdc:mga06r32_343490_c1
591 nmdc:mga0rr50_783832_c1
592 Ga0495619_0304938
593 Ga0495619_0963960
594 Ga0500651_0095532
595 Ga0500641_0051660
596 Ga0500650_0109774
597 Ga0500569_024913
598 Ga0500621_114908
599 Ga0500652_303007
600 Ga0500573_0087786
601 Ga0500633_0079592
602 Ga0501084_0003775
603 Ga0501084_0863335
604 Ga0501082_0195949
605 Ga0466962_0056902
606 Ga0530510_0353573
607 2644033881
608 2676487297
609 2740166534
610 8054610530

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01638

HxlR

HxlR-like helix-turn-helix

22

111

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7kd3-assembly1.cif.gz_A structure of an hxlr/duf24 family transcription regulator, cdtr_3200 from hypervirulent clostridioides difficile r20291 0.8811 14 109
7bzg-assembly3.cif.gz_J structure of bacillus subtilis hxlr, wild type in complex with formaldehyde and dna 0.8712 13 109
4a5n-assembly2.cif.gz_D redoxregulator hypr in its reduced form 0.8695 16 107
2hzt-assembly1.cif.gz_B crystal structure of a putative hth-type transcriptional regulator ytcd 0.8661 15 109
2hoe-assembly1.cif.gz_A crystal structure of n-acetylglucosamine kinase (tm1224) from thermotoga maritima at 2.46 a resolution 0.8646 41 88
ID Description Score Start End Superfamily
2f2eB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9306 18 109 1.10.10.10
af_P9WMG3_11_158_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9073 15 153 1.10.10.10
2f2eB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9006 18 109 1.10.10.10
af_Q9C106_1_81_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8816 30 88 1.10.10.10
af_A0A0P0Y293_209_294_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8721 53 89 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A0Q8UMM8-F1-model_v4 Transcriptional regulator 0.9658 2 159 GO:0003677
AF-A0A5B8NS31-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9658 14 111 GO:0003677
AF-A0A561VRG0-F1-model_v4 HxlR family transcriptional regulator 0.9591 3 156 GO:0003677
AF-A0A1H0BCG2-F1-model_v4 Transcriptional regulator, HxlR family 0.959 6 156 GO:0003677
AF-A0A6L7F0N4-F1-model_v4 Transcriptional regulator 0.9584 20 155 GO:0003677

Map