F397615

General Info

Members Datasets Scaffolds Average Seq Length
304 178 608 304

Family's Representative Sequence

Representative Sequence 3300025921|Ga0207652_10026899|Ga0207652_100268993
Length 307
Sequence MSWQAAEEPETKTPPPCPALKHVIVPRPRDLGGFEVRRVLPARDLRSVGPFVFFDQMGPADLAPGQGIDVRPHPHIGLATVTYLFDGTIVHRDSLGSVQAIEPGAVNWMTAGRGIVHSERSDTELRNLRRQKLYGIQIWVALPRDREETEPDFTHYPAASLPVSEGEGKTVRIIAGNFGGQTSPVKTLSALFYADAVLRRGSSLVLENAYAERAIYLLEGNVAIRQQVFEPGRLLVFAAGDEIAVRAASDARVLLFGGEPLDGPRHLWWNFVSTSRERIERAKVDWKEKRFAAVPGETEFIPLPENS

Samples

Sample ID Description Type Environment
1 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
3 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
19 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
36 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
37 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
41 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
44 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
60 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
66 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
67 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
68 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
69 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
70 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
78 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
79 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
80 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
81 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
82 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
83 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
84 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
85 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
86 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
87 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
88 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
89 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
90 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
91 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
92 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
93 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
94 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
95 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
96 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
97 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
98 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
99 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
100 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
104 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
105 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
106 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
107 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
108 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
122 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
144 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
145 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
146 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
147 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
148 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
149 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
155 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
156 2643221733 Bosea sp. Root381 Isolate Unclassified
157 2643221734 Bosea sp. Root670 Isolate Unclassified
158 2643221736 Bosea sp. Root483D1 Isolate Unclassified
159 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
160 2818991467 Bosea vestrisii 3192 Isolate Unclassified
161 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
162 2841760612 Bosea sp. Tri-49 Isolate Nodule
163 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
164 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
165 2842694124 Methylopila sp. R-72369 Isolate Unclassified
166 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
167 2844104063 Bosea sp. Tri-39 Isolate Nodule
168 2851182111 Bosea sp. Tri-44 Isolate Nodule
169 2851246043 Bosea sp. Tri-54 Isolate Nodule
170 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
171 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
172 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
173 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
174 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
175 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
176 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
177 641522639 Methylobacterium sp. 4-46 Isolate Nodule
178 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.78
Metatranscriptomes 0
Isolates 8.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.91
Nodule 3.29
Rhizoplane 6.25
Rhizosphere 70.39
Stem 0
Stem Tuber 0
Unclassified 0.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207652_10026899 3300025921 Bacteria 4794
2 Ga0055526_1000108 3300003771 Bacteria 72583
3 Ga0055524_1000055 3300003775 Bacteria 141970
4 Ga0065165_1000577 3300005262 Bacteria 54256
5 Ga0065715_10089825 3300005293 Bacteria 8384
6 Ga0070694_100181233 3300005444 Bacteria 1558
7 Ga0070681_10268563 3300005458 Bacteria 1617
8 Ga0070698_100326601 3300005471 Bacteria 1465
9 Ga0070699_100082259 3300005518 Bacteria 2807
10 Ga0070679_100039206 3300005530 Bacteria 4709
11 Ga0070697_100375830 3300005536 Bacteria 1230
12 Ga0070704_100136623 3300005549 Bacteria 1908
13 Ga0070704_100203140 3300005549 Bacteria 1601
14 Ga0070664_100237918 3300005564 Bacteria 1634
15 Ga0068864_100467737 3300005618 Bacteria 1208
16 Ga0068860_100339015 3300005843 Bacteria 1478
17 Ga0081455_10180713 3300005937 Bacteria 1597
18 Ga0081538_10002027 3300005981 Bacteria 20254
19 Ga0070716_100068461 3300006173 Bacteria 2077
20 Ga0070716_100129356 3300006173 Bacteria 1594
21 Ga0075370_10219305 3300006353 Bacteria 1124
22 Ga0075428_100087953 3300006844 Bacteria 3389
23 Ga0075428_100106245 3300006844 Bacteria 3061
24 Ga0075428_100292187 3300006844 Bacteria 1753
25 Ga0075428_100292256 3300006844 Bacteria 1753
26 Ga0075428_100346153 3300006844 Bacteria 1595
27 Ga0075431_100290611 3300006847 Bacteria 1654
28 Ga0075433_10093256 3300006852 Bacteria 2664
29 Ga0075433_10134329 3300006852 Bacteria 2199
30 Ga0075434_100013499 3300006871 Bacteria 7778
31 Ga0075434_100031371 3300006871 Bacteria 5239
32 Ga0075429_100054121 3300006880 Bacteria 3491
33 Ga0075429_100432826 3300006880 Bacteria 1153
34 Ga0075436_100043114 3300006914 Bacteria 3110
35 Ga0075436_100056806 3300006914 Bacteria 2703
36 Ga0075435_100008677 3300007076 Bacteria 7308
37 Ga0075435_100017740 3300007076 Bacteria 5394
38 Ga0075435_100194517 3300007076 Bacteria 1717
39 Ga0075435_100259380 3300007076 Bacteria 1481
40 Ga0111539_10005992 3300009094 Bacteria 15706
41 Ga0111539_10045886 3300009094 Bacteria 5229
42 Ga0111539_10193268 3300009094 Bacteria 2374
43 Ga0105245_10165704 3300009098 Bacteria 2101
44 Ga0114129_10040894 3300009147 Bacteria 6534
45 Ga0114129_10162272 3300009147 Bacteria 3052
46 Ga0114129_10274045 3300009147 Bacteria 2257
47 Ga0114129_10376459 3300009147 Bacteria 1876
48 Ga0114129_10551497 3300009147 Bacteria 1499
49 Ga0114129_10859616 3300009147 Bacteria 1152
50 Ga0105243_10231596 3300009148 Bacteria 1639
51 Ga0105248_10944038 3300009177 Bacteria 974
52 Ga0163162_10054864 3300013306 Bacteria 4010
53 Ga0163163_10226826 3300014325 Bacteria 1917
54 Ga0157376_10044072 3300014969 Bacteria 3665
55 Ga0213873_10007432 3300021358 Bacteria 2195
56 Ga0213874_10010157 3300021377 Bacteria 2351
57 Ga0213876_10000321 3300021384 Bacteria 41962
58 Ga0213876_10000575 3300021384 Bacteria 27311
59 Ga0213876_10007952 3300021384 Bacteria 5751
60 Ga0213875_10000058 3300021388 Bacteria 135597
61 Ga0213875_10012586 3300021388 Bacteria 4171
62 Ga0213875_10052990 3300021388 Bacteria 1900
63 Ga0209673_1028089 3300025273 Bacteria 1818
64 Ga0209130_1000348 3300025284 Bacteria 53200
65 Ga0209675_1000340 3300025291 Bacteria 40870
66 Ga0209676_1012066 3300025292 Bacteria 3430
67 Ga0209025_1000016 3300025294 Bacteria 770739
68 Ga0209025_1000753 3300025294 Bacteria 54198
69 Ga0209025_1012287 3300025294 Bacteria 5511
70 Ga0209564_1000034 3300025295 Bacteria 444284
71 Ga0209256_1000026 3300025299 Bacteria 432835
72 Ga0209256_1000188 3300025299 Bacteria 117988
73 Ga0209257_1048450 3300025304 Bacteria 1215
74 Ga0209257_1052654 3300025304 Bacteria 1142
75 Ga0207697_10004660 3300025315 Bacteria 6502
76 Ga0207688_10051706 3300025901 Bacteria 2301
77 Ga0207688_10186549 3300025901 Bacteria 1239
78 Ga0207699_10186584 3300025906 Bacteria 1397
79 Ga0207707_10005916 3300025912 Bacteria 10701
80 Ga0207664_10004176 3300025929 Bacteria 9755
81 Ga0207709_10282656 3300025935 Bacteria 1226
82 Ga0207670_10059897 3300025936 Bacteria 2591
83 Ga0207665_10012568 3300025939 Bacteria 5564
84 Ga0207648_10565312 3300026089 Bacteria 1046
85 Ga0207675_100282296 3300026118 Bacteria 1614
86 Ga0207683_10358794 3300026121 Bacteria 1338
87 Ga0209974_10005845 3300027876 Bacteria 4314
88 Ga0207428_10027237 3300027907 Bacteria 4760
89 Ga0265334_10000022 3300028573 Bacteria 127132
90 Ga0307412_10202546 3300031911 Bacteria 1508
91 Ga0307416_100026314 3300032002 Bacteria 4285
92 Ga0307414_10284919 3300032004 Bacteria 1390
93 Ga0307415_100230213 3300032126 Bacteria 1492
94 Ga0307415_100494233 3300032126 Bacteria 1068
95 Ga0373926_0020592 3300035083 Bacteria 2279
96 Ga0373939_0052173 3300035114 Bacteria 1274
97 Ga0373931_0025442 3300035691 Bacteria 3006
98 Ga0373933_0062430 3300035724 Bacteria 2250
99 Ga0373947_0066750 3300035725 Bacteria 2196
100 Ga0395899_0076485 3300037312 Bacteria 2443
101 Ga0395900_0040812 3300037418 Bacteria 4783
102 Ga0395900_0225604 3300037418 Bacteria 1886
103 Ga0395898_0018978 3300037466 Bacteria 7004
104 Ga0395898_0028693 3300037466 Bacteria 5577
105 Ga0395898_0110584 3300037466 Bacteria 2634
106 Ga0395898_0118337 3300037466 Bacteria 2538
107 Ga0395898_0301000 3300037466 Bacteria 1530
108 Ga0436364_0066239 3300037853 Bacteria 6748
109 Ga0436364_0370476 3300037853 Bacteria 58769
110 Ga0436364_0705975 3300037853 Bacteria 1832
111 Ga0436364_1065214 3300037853 Bacteria 2410
112 Ga0436364_1078241 3300037853 Bacteria 2414
113 Ga0436364_1134088 3300037853 Bacteria 2349
114 Ga0395901_0037602 3300038443 Bacteria 5006
115 Ga0400483_245444 3300039062 Bacteria 1219
116 Ga0436365_0363047 3300039437 Bacteria 77624
117 Ga0436365_0777718 3300039437 Bacteria 3373
118 Ga0436365_0956965 3300039437 Bacteria 31998
119 Ga0436365_1419998 3300039437 Bacteria 4699
120 Ga0436365_1612396 3300039437 Bacteria 3068
121 Ga0436360_0459598 3300039438 Bacteria 7762
122 Ga0436361_0783368 3300039447 Bacteria 5715
123 Ga0436363_0205049 3300039450 Bacteria 1210
124 Ga0436363_0361156 3300039450 Bacteria 2709
125 Ga0436363_1180442 3300039450 Bacteria 1796
126 Ga0436363_1237412 3300039450 Bacteria 1469
127 Ga0436362_0587004 3300039453 Bacteria 2725
128 Ga0436362_1257539 3300039453 Bacteria 2471
129 Ga0466970_0120317 3300044765 Bacteria 1438
130 Ga0495629_0086132 3300046459 Bacteria 2192
131 Ga0495629_0158781 3300046459 Bacteria 1571
132 Ga0495651_0341673 3300046462 Bacteria 992
133 Ga0495580_0195906 3300046472 Bacteria 1393
134 Ga0495585_0057810 3300046492 Bacteria 2140
135 Ga0495632_0168502 3300046519 Bacteria 1007
136 Ga0495652_0056936 3300046529 Bacteria 3318
137 Ga0495586_0052086 3300046535 Bacteria 2216
138 Ga0495624_0273595 3300046690 Bacteria 1020
139 Ga0495670_0178728 3300046691 Bacteria 1120
140 Ga0495636_0119043 3300047318 Bacteria 1167
141 Ga0495675_0080612 3300047444 Bacteria 2050
142 Ga0496100_0022616 3300048903 Bacteria 3806
143 Ga0496104_0123133 3300048907 Bacteria 2489
144 Ga0496106_0105454 3300048909 Unclassified 2190
145 Ga0496107_0062743 3300048910 Bacteria 2692
146 Ga0496107_0068238 3300048910 Bacteria 2581
147 Ga0496107_0359362 3300048910 Bacteria 1083
148 Ga0496108_0035163 3300048911 Bacteria 4164
149 Ga0496108_0103307 3300048911 Bacteria 2431
150 Ga0496108_0412143 3300048911 Bacteria 1180
151 Ga0496109_0018504 3300048912 Bacteria 6118
152 Ga0496110_0071340 3300048913 Bacteria 3080
153 Ga0496110_0175429 3300048913 Bacteria 1945
154 Ga0496112_0084895 3300048915 Bacteria 3132
155 Ga0496112_0535617 3300048915 Bacteria 1105
156 Ga0496114_0022058 3300048917 Bacteria 5184
157 Ga0496114_0084593 3300048917 Bacteria 2686
158 Ga0496114_0496506 3300048917 Bacteria 1080
159 Ga0496115_0055080 3300048918 Bacteria 3194
160 Ga0496115_0120915 3300048918 Bacteria 2155
161 Ga0496117_0082585 3300048920 Bacteria 2104
162 Ga0496122_0028379 3300048925 Bacteria 4750
163 Ga0496123_0079389 3300048926 Bacteria 2005
164 Ga0496125_0227483 3300048928 Bacteria 1196
165 Ga0496126_0029432 3300048929 Bacteria 5218
166 Ga0501031_0006362 3300049568 Bacteria 7703
167 Ga0501031_0057706 3300049568 Bacteria 2529
168 Ga0501033_0078210 3300049570 Bacteria 2427
169 Ga0501034_0017301 3300049571 Bacteria 7397
170 Ga0501036_0069734 3300049572 Bacteria 2973
171 Ga0501036_0085016 3300049572 Bacteria 2674
172 Ga0501037_0102921 3300049573 Bacteria 2059
173 Ga0501037_0213173 3300049573 Bacteria 1361
174 Ga0501037_0328946 3300049573 Bacteria 1057
175 Ga0501038_0002824 3300049574 Bacteria 16164
176 Ga0501039_0004796 3300049575 Bacteria 10238
177 Ga0501039_0028748 3300049575 Bacteria 4280
178 Ga0501040_0005032 3300049576 Bacteria 8542
179 Ga0501040_0065954 3300049576 Bacteria 2494
180 Ga0501040_0315739 3300049576 Bacteria 1117
181 Ga0501041_0001480 3300049577 Bacteria 13002
182 Ga0501041_0013924 3300049577 Bacteria 4769
183 Ga0501041_0099776 3300049577 Bacteria 1796
184 Ga0501042_0005490 3300049578 Bacteria 8172
185 Ga0501042_0019757 3300049578 Bacteria 4683
186 Ga0501042_0212183 3300049578 Bacteria 1396
187 Ga0501046_0075289 3300049580 Bacteria 2617
188 Ga0501046_0089344 3300049580 Bacteria 2371
189 Ga0501047_0125565 3300049581 Bacteria 2446
190 Ga0501048_0009985 3300049582 Bacteria 7108
191 Ga0501048_0009989 3300049582 Bacteria 7106
192 Ga0501048_0018840 3300049582 Bacteria 5074
193 Ga0501067_0055734 3300049583 Bacteria 2190
194 Ga0501068_0018896 3300049584 Bacteria 3994
195 Ga0501069_0046744 3300049585 Bacteria 2402
196 Ga0501070_0057073 3300049586 Bacteria 3236
197 Ga0501070_0232297 3300049586 Bacteria 1511
198 Ga0501070_0416000 3300049586 Bacteria 1086
199 Ga0501071_0082484 3300049587 Bacteria 2354
200 Ga0501072_0000821 3300049588 Bacteria 22839
201 Ga0501072_0003852 3300049588 Bacteria 11338
202 Ga0501073_0214844 3300049589 Bacteria 1329
203 Ga0501075_0032398 3300049591 Bacteria 3882
204 Ga0501075_0055338 3300049591 Bacteria 2986
205 Ga0501075_0075249 3300049591 Bacteria 2553
206 Ga0501075_0126918 3300049591 Bacteria 1942
207 Ga0501075_0139530 3300049591 Bacteria 1847
208 Ga0501075_0158900 3300049591 Bacteria 1724
209 Ga0501075_0202169 3300049591 Bacteria 1515
210 Ga0501076_0000675 3300049592 Bacteria 21921
211 Ga0501076_0021598 3300049592 Bacteria 4940
212 Ga0501076_0323671 3300049592 Bacteria 1264
213 Ga0501077_0009585 3300049593 Bacteria 6020
214 Ga0501077_0130475 3300049593 Bacteria 1593
215 Ga0501077_0228140 3300049593 Bacteria 1184
216 Ga0501079_0007833 3300049741 Bacteria 8088
217 Ga0501079_0056429 3300049741 Bacteria 3030
218 Ga0501079_0088106 3300049741 Bacteria 2403
219 Ga0501079_0156105 3300049741 Bacteria 1779
220 Ga0501080_0014353 3300049742 Bacteria 7294
221 Ga0501080_0120001 3300049742 Bacteria 2437
222 Ga0501080_0125221 3300049742 Bacteria 2380
223 Ga0501080_0629032 3300049742 Bacteria 951
224 Ga0501081_0030998 3300049743 Bacteria 3623
225 Ga0501081_0036304 3300049743 Bacteria 3360
226 Ga0501081_0092287 3300049743 Bacteria 2130
227 Ga0501083_0025543 3300049744 Bacteria 4090
228 Ga0501083_0062385 3300049744 Bacteria 2487
229 Ga0501083_0116880 3300049744 Bacteria 1750
230 Ga0501035_0063056 3300049822 Bacteria 3297
231 Ga0501035_0162953 3300049822 Bacteria 1929
232 Ga0501035_0252238 3300049822 Bacteria 1498
233 Ga0501044_0339187 3300049823 Bacteria 1424
234 Ga0501044_0602469 3300049823 Bacteria 992
235 Ga0501045_0000697 3300049824 Bacteria 21376
236 Ga0501045_0029871 3300049824 Bacteria 3941
237 Ga0501045_0117408 3300049824 Bacteria 1975
238 Ga0501045_0351470 3300049824 Bacteria 1097
239 nmdc:mga05p37_136711_c1 3300050507 Bacteria 3004
240 nmdc:mga05p37_564266_c1 3300050507 Bacteria 1293
241 nmdc:mga05p37_629854_c1 3300050507 Bacteria 1205
242 nmdc:mga05p37_724534_c1 3300050507 Bacteria 1101
243 nmdc:mga09592_374402_c1 3300050508 Bacteria 1232
244 nmdc:mga06r32_107077_c1 3300050510 Bacteria 2747
245 nmdc:mga06r32_187808_c1 3300050510 Bacteria 2054
246 nmdc:mga08y16_219066_c1 3300050511 Bacteria 1970
247 nmdc:mga08y16_33513_c1 3300050511 Bacteria 5394
248 nmdc:mga08y16_53192_c1 3300050511 Bacteria 4235
249 nmdc:mga08y16_96048_c1 3300050511 Bacteria 3086
250 nmdc:mga0n895_12735_c1 3300050512 Bacteria 7552
251 nmdc:mga0n895_58329_c1 3300050512 Bacteria 3806
252 nmdc:mga0n895_6877_c1 3300050512 Bacteria 9715
253 nmdc:mga0n895_69234_c1 3300050512 Bacteria 3496
254 nmdc:mga0rr50_117321_c1 3300050513 Bacteria 2114
255 nmdc:mga0rr50_2587_c1 3300050513 Bacteria 10248
256 nmdc:mga0rr50_50892_c1 3300050513 Bacteria 3071
257 nmdc:mga08x19_72417_c1 3300050514 Bacteria 2248
258 nmdc:mga0a205_462654_c1 3300050515 Bacteria 1128
259 nmdc:mga0a205_67669_c1 3300050515 Bacteria 3450
260 nmdc:mga0sz30_15866_c1 3300050516 Bacteria 2981
261 Ga0495612_0055106 3300053078 Bacteria 1638
262 Ga0500556_0000518 3300053104 Bacteria 26343
263 Ga0500642_0043905 3300053130 Bacteria 1944
264 Ga0500616_0020835 3300053153 Bacteria 3681
265 Ga0500636_0047924 3300053177 Bacteria 2516
266 Ga0501084_0003181 3300054114 Bacteria 13282
267 Ga0501084_0019072 3300054114 Bacteria 5712
268 Ga0501084_0140340 3300054114 Bacteria 2035
269 Ga0501084_0163957 3300054114 Bacteria 1876
270 Ga0501082_0003282 3300060353 Bacteria 14121
271 Ga0501082_0069721 3300060353 Bacteria 3027
272 Ga0501082_0092470 3300060353 Bacteria 2613
273 Ga0501082_0099932 3300060353 Bacteria 2509
274 Ga0501082_0106601 3300060353 Bacteria 2424
275 Ga0501082_0107224 3300060353 Bacteria 2417
276 Ga0530510_0066422 3300061734 Bacteria 2615
277 Ga0530510_0074802 3300061734 Bacteria 2459
278 Ga0530510_0077036 3300061734 Bacteria 2424
279 Ga0530510_0143965 3300061734 Bacteria 1757
280 2545673204 2545555834 Bacteria 8130841
281 2644727823 2643221733 Bacteria 5690728
282 2644733624 2643221734 Bacteria 5365412
283 2644741938 2643221736 Bacteria 6608466
284 2776259753 2775506901 Bacteria 9631051
285 2776265767 2775506901 Bacteria 9631051
286 2819717110 2818991467 Bacteria 5893227
287 2829748284 2829745981 Bacteria 5406054
288 2841763361 2841760612 Bacteria 6454112
289 2841912625 2841911363 Bacteria 6173697
290 2841918380 2841917233 Bacteria 6173500
291 2842697524 2842694124 Bacteria 4063419
292 2842699557 2842698319 Bacteria 5190321
293 2844108768 2844104063 Bacteria 6440972
294 2851182600 2851182111 Bacteria 6047226
295 2851250875 2851246043 Bacteria 6439203
296 2882461046 2882456835 Bacteria 6863978
297 2889309718 2889306138 Bacteria 6358934
298 2894239301 2894232714 Bacteria 8834183
299 2902408595 2902405164 Bacteria 6784948
300 2917701396 2917699015 Bacteria 7043791
301 2928125531 2928125067 Bacteria 5937560
302 3003666653 3003665799 Bacteria 7279786
303 641642196 641522639 Bacteria 7737025
304 8057534713 8057529695 Bacteria 6306553
305 Ga0207652_10026899
306 Ga0055526_1000108
307 Ga0055524_1000055
308 Ga0065165_1000577
309 Ga0065715_10089825
310 Ga0070694_100181233
311 Ga0070681_10268563
312 Ga0070698_100326601
313 Ga0070699_100082259
314 Ga0070679_100039206
315 Ga0070697_100375830
316 Ga0070704_100136623
317 Ga0070704_100203140
318 Ga0070664_100237918
319 Ga0068864_100467737
320 Ga0068860_100339015
321 Ga0081455_10180713
322 Ga0081538_10002027
323 Ga0070716_100068461
324 Ga0070716_100129356
325 Ga0075370_10219305
326 Ga0075428_100087953
327 Ga0075428_100106245
328 Ga0075428_100292187
329 Ga0075428_100292256
330 Ga0075428_100346153
331 Ga0075431_100290611
332 Ga0075433_10093256
333 Ga0075433_10134329
334 Ga0075434_100013499
335 Ga0075434_100031371
336 Ga0075429_100054121
337 Ga0075429_100432826
338 Ga0075436_100043114
339 Ga0075436_100056806
340 Ga0075435_100008677
341 Ga0075435_100017740
342 Ga0075435_100194517
343 Ga0075435_100259380
344 Ga0111539_10005992
345 Ga0111539_10045886
346 Ga0111539_10193268
347 Ga0105245_10165704
348 Ga0114129_10040894
349 Ga0114129_10162272
350 Ga0114129_10274045
351 Ga0114129_10376459
352 Ga0114129_10551497
353 Ga0114129_10859616
354 Ga0105243_10231596
355 Ga0105248_10944038
356 Ga0163162_10054864
357 Ga0163163_10226826
358 Ga0157376_10044072
359 Ga0213873_10007432
360 Ga0213874_10010157
361 Ga0213876_10000321
362 Ga0213876_10000575
363 Ga0213876_10007952
364 Ga0213875_10000058
365 Ga0213875_10012586
366 Ga0213875_10052990
367 Ga0209673_1028089
368 Ga0209130_1000348
369 Ga0209675_1000340
370 Ga0209676_1012066
371 Ga0209025_1000016
372 Ga0209025_1000753
373 Ga0209025_1012287
374 Ga0209564_1000034
375 Ga0209256_1000026
376 Ga0209256_1000188
377 Ga0209257_1048450
378 Ga0209257_1052654
379 Ga0207697_10004660
380 Ga0207688_10051706
381 Ga0207688_10186549
382 Ga0207699_10186584
383 Ga0207707_10005916
384 Ga0207664_10004176
385 Ga0207709_10282656
386 Ga0207670_10059897
387 Ga0207665_10012568
388 Ga0207648_10565312
389 Ga0207675_100282296
390 Ga0207683_10358794
391 Ga0209974_10005845
392 Ga0207428_10027237
393 Ga0265334_10000022
394 Ga0307412_10202546
395 Ga0307416_100026314
396 Ga0307414_10284919
397 Ga0307415_100230213
398 Ga0307415_100494233
399 Ga0373926_0020592
400 Ga0373939_0052173
401 Ga0373931_0025442
402 Ga0373933_0062430
403 Ga0373947_0066750
404 Ga0395899_0076485
405 Ga0395900_0040812
406 Ga0395900_0225604
407 Ga0395898_0018978
408 Ga0395898_0028693
409 Ga0395898_0110584
410 Ga0395898_0118337
411 Ga0395898_0301000
412 Ga0436364_0066239
413 Ga0436364_0370476
414 Ga0436364_0705975
415 Ga0436364_1065214
416 Ga0436364_1078241
417 Ga0436364_1134088
418 Ga0395901_0037602
419 Ga0400483_245444
420 Ga0436365_0363047
421 Ga0436365_0777718
422 Ga0436365_0956965
423 Ga0436365_1419998
424 Ga0436365_1612396
425 Ga0436360_0459598
426 Ga0436361_0783368
427 Ga0436363_0205049
428 Ga0436363_0361156
429 Ga0436363_1180442
430 Ga0436363_1237412
431 Ga0436362_0587004
432 Ga0436362_1257539
433 Ga0466970_0120317
434 Ga0495629_0086132
435 Ga0495629_0158781
436 Ga0495651_0341673
437 Ga0495580_0195906
438 Ga0495585_0057810
439 Ga0495632_0168502
440 Ga0495652_0056936
441 Ga0495586_0052086
442 Ga0495624_0273595
443 Ga0495670_0178728
444 Ga0495636_0119043
445 Ga0495675_0080612
446 Ga0496100_0022616
447 Ga0496104_0123133
448 Ga0496106_0105454
449 Ga0496107_0062743
450 Ga0496107_0068238
451 Ga0496107_0359362
452 Ga0496108_0035163
453 Ga0496108_0103307
454 Ga0496108_0412143
455 Ga0496109_0018504
456 Ga0496110_0071340
457 Ga0496110_0175429
458 Ga0496112_0084895
459 Ga0496112_0535617
460 Ga0496114_0022058
461 Ga0496114_0084593
462 Ga0496114_0496506
463 Ga0496115_0055080
464 Ga0496115_0120915
465 Ga0496117_0082585
466 Ga0496122_0028379
467 Ga0496123_0079389
468 Ga0496125_0227483
469 Ga0496126_0029432
470 Ga0501031_0006362
471 Ga0501031_0057706
472 Ga0501033_0078210
473 Ga0501034_0017301
474 Ga0501036_0069734
475 Ga0501036_0085016
476 Ga0501037_0102921
477 Ga0501037_0213173
478 Ga0501037_0328946
479 Ga0501038_0002824
480 Ga0501039_0004796
481 Ga0501039_0028748
482 Ga0501040_0005032
483 Ga0501040_0065954
484 Ga0501040_0315739
485 Ga0501041_0001480
486 Ga0501041_0013924
487 Ga0501041_0099776
488 Ga0501042_0005490
489 Ga0501042_0019757
490 Ga0501042_0212183
491 Ga0501046_0075289
492 Ga0501046_0089344
493 Ga0501047_0125565
494 Ga0501048_0009985
495 Ga0501048_0009989
496 Ga0501048_0018840
497 Ga0501067_0055734
498 Ga0501068_0018896
499 Ga0501069_0046744
500 Ga0501070_0057073
501 Ga0501070_0232297
502 Ga0501070_0416000
503 Ga0501071_0082484
504 Ga0501072_0000821
505 Ga0501072_0003852
506 Ga0501073_0214844
507 Ga0501075_0032398
508 Ga0501075_0055338
509 Ga0501075_0075249
510 Ga0501075_0126918
511 Ga0501075_0139530
512 Ga0501075_0158900
513 Ga0501075_0202169
514 Ga0501076_0000675
515 Ga0501076_0021598
516 Ga0501076_0323671
517 Ga0501077_0009585
518 Ga0501077_0130475
519 Ga0501077_0228140
520 Ga0501079_0007833
521 Ga0501079_0056429
522 Ga0501079_0088106
523 Ga0501079_0156105
524 Ga0501080_0014353
525 Ga0501080_0120001
526 Ga0501080_0125221
527 Ga0501080_0629032
528 Ga0501081_0030998
529 Ga0501081_0036304
530 Ga0501081_0092287
531 Ga0501083_0025543
532 Ga0501083_0062385
533 Ga0501083_0116880
534 Ga0501035_0063056
535 Ga0501035_0162953
536 Ga0501035_0252238
537 Ga0501044_0339187
538 Ga0501044_0602469
539 Ga0501045_0000697
540 Ga0501045_0029871
541 Ga0501045_0117408
542 Ga0501045_0351470
543 nmdc:mga05p37_136711_c1
544 nmdc:mga05p37_564266_c1
545 nmdc:mga05p37_629854_c1
546 nmdc:mga05p37_724534_c1
547 nmdc:mga09592_374402_c1
548 nmdc:mga06r32_107077_c1
549 nmdc:mga06r32_187808_c1
550 nmdc:mga08y16_219066_c1
551 nmdc:mga08y16_33513_c1
552 nmdc:mga08y16_53192_c1
553 nmdc:mga08y16_96048_c1
554 nmdc:mga0n895_12735_c1
555 nmdc:mga0n895_58329_c1
556 nmdc:mga0n895_6877_c1
557 nmdc:mga0n895_69234_c1
558 nmdc:mga0rr50_117321_c1
559 nmdc:mga0rr50_2587_c1
560 nmdc:mga0rr50_50892_c1
561 nmdc:mga08x19_72417_c1
562 nmdc:mga0a205_462654_c1
563 nmdc:mga0a205_67669_c1
564 nmdc:mga0sz30_15866_c1
565 Ga0495612_0055106
566 Ga0500556_0000518
567 Ga0500642_0043905
568 Ga0500616_0020835
569 Ga0500636_0047924
570 Ga0501084_0003181
571 Ga0501084_0019072
572 Ga0501084_0140340
573 Ga0501084_0163957
574 Ga0501082_0003282
575 Ga0501082_0069721
576 Ga0501082_0092470
577 Ga0501082_0099932
578 Ga0501082_0106601
579 Ga0501082_0107224
580 Ga0530510_0066422
581 Ga0530510_0074802
582 Ga0530510_0077036
583 Ga0530510_0143965
584 2545673204
585 2644727823
586 2644733624
587 2644741938
588 2776259753
589 2776265767
590 2819717110
591 2829748284
592 2841763361
593 2841912625
594 2841918380
595 2842697524
596 2842699557
597 2844108768
598 2851182600
599 2851250875
600 2882461046
601 2889309718
602 2894239301
603 2902408595
604 2917701396
605 2928125531
606 3003666653
607 641642196
608 8057534713

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02678

Pirin

Pirin

33

140

0.97

PF05726

Pirin_C

Pirin C-terminal cupin domain

193

292

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7tfq-assembly1.cif.gz_A crystal structure of the pirin family protein redox-sensitive bicupin yhak bound to copper ion from yersinia pestis 0.9403 18 290
6d0p-assembly4.cif.gz_D 1.88 angstrom resolution crystal structure of quercetin 2,3-dioxygenase from acinetobacter baumannii 0.9374 19 293
7tfq-assembly1.cif.gz_A crystal structure of the pirin family protein redox-sensitive bicupin yhak bound to copper ion from yersinia pestis 0.9021 18 290
4hlt-assembly1.cif.gz_A crystal structure of ferric e32v pirin 0.9014 20 287
6d0g-assembly1.cif.gz_A 1.78 angstrom resolution crystal structure of quercetin 2,3-dioxygenase from acinetobacter baumannii 0.8967 16 306
ID Description Score Start End Superfamily
af_Q5M827_137_273_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9197 159 286 2.60.120.10
af_Q9D711_137_245_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9174 159 259 2.60.120.10
af_I1KYF4_44_139_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8941 50 151 2.60.120.10
4ewaA01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8941 161 260 2.60.120.10
af_A0A0R0EY21_77_180_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8865 161 258 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A5E6QY55-F1-model_v4 Pirin N-terminal domain-containing protein 0.9948 60 161
AF-A0A6L3ZQX3-F1-model_v4 deleted 0.9898 22 151
AF-A0A0H1R615-F1-model_v4 Pirin 0.9894 94 305
AF-A0A4Y7U2E3-F1-model_v4 Pirin family protein 0.989 53 154
AF-A0A519JIQ8-F1-model_v4 Pirin family protein 0.9888 47 186

Map