F395498

General Info

Members Datasets Scaffolds Average Seq Length
300 204 295 688

Family's Representative Sequence

Representative Sequence 3300044656|Ga0466969_0007111|Ga0466969_0007111_996_3422
Length 808
Sequence MTDLFVDPAARAAELRALLTRYNREYYELDAPTVPDAEYDRLFRELADLEQAHPELRTPDSPTQRVGGAPLPTFESVTHAVPMLSLNNAFSDLQADDFAARHAELIAFDERVKKGLGVAEVEYACEPKFDGLAISLVYENGVLTQAATRGDGVTGENVTQNVRTVRSIPLKLSTDQPPALLEVRGEVLMLKADFEKLNADQAARGDKTFANPRNAAAGSLRQLDARITARRRLSFFSYAIARVEGAPWPATHQNEMAWLASLGLPRPAPELCPVVRGASGLAQFYESVLAHRATLPFDIDGVVYKVNSLEQQRALGFVSRAPRFAIAHKYPAEEALTTVEAIDVQVGRTGALTPVARLKPVFVGGVTVTNATLHNEDEVSRKDVRIGDTVIVRRAGDVIPEVVAVVLERRPMQPAEGGDLFSGGEQPQYPPYRLPTSCPVCGSHVVREEGEAVARCSGGLICRAQRTQAIIHFAGRRMMDIDGLGERYVENLVEFDYVKSVADLYKLTLDDLLEMKRRAEERDGEVPETVKAGQIATKWAENLLEGIAASRRTMLARLLFALGIRHVGESTAKTLADWLGRLEYVRRAPAALLASLPDIGLVVAEAIAEFFAEPNNETVLDALLDNGVAPHDEHAPNPRLAERLEPAALLARLGIPRLTETRAEQLAAQIASLEQLAALPRREVIELKLPAEVVNALADWLDEEEHRQQLATLTHLREELLQALPEAAQSGPLLLEGKTLVLTGTLPTLTRDQAKEMIEAAGGKVAGSVSKKTDYVVAGEAAGSKLAKAEELGVTVLDEAGLIALLAG

Samples

Sample ID Description Type Environment
1 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
2 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
3 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
4 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
74 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
75 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
76 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
114 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
115 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
116 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
117 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
118 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
119 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
120 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
121 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
122 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
123 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
124 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
125 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
126 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
127 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
128 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
129 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
130 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
131 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
132 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
133 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
134 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
135 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
136 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
137 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
138 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
139 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
140 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
141 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
142 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
143 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
144 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
145 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
146 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
147 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
148 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
149 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
150 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
151 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
152 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
153 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
154 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
155 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
156 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
157 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
158 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
159 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
160 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
165 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
166 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
167 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
180 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
181 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
182 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
183 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
184 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
185 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
186 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
187 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
188 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
189 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
190 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
193 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
194 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
195 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
196 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
197 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
198 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
199 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
200 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
201 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
202 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
203 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
204 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.33
Metatranscriptomes 0
Isolates 1.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.33
Nodule 0.33
Rhizoplane 3
Rhizosphere 92.33
Stem 0
Stem Tuber 0
Unclassified 3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10001882 3300003215 Bacteria 12433
2 Ga0070690_100003034 3300005330 Bacteria 9112
3 Ga0070666_10001296 3300005335 Bacteria 15138
4 Ga0070689_100053147 3300005340 Bacteria 3134
5 Ga0070691_10001432 3300005341 Bacteria 10194
6 Ga0070661_100000043 3300005344 Bacteria 98908
7 Ga0070692_10044614 3300005345 Bacteria 2284
8 Ga0070669_100006345 3300005353 Bacteria 8524
9 Ga0070674_100004938 3300005356 Bacteria 7644
10 Ga0070714_100015132 3300005435 Bacteria 6203
11 Ga0070713_100000001 3300005436 Bacteria 257984
12 Ga0070713_100001718 3300005436 Bacteria 14095
13 Ga0070710_10019028 3300005437 Bacteria 3544
14 Ga0070711_100001570 3300005439 Bacteria 12574
15 Ga0070705_100007222 3300005440 Bacteria 5461
16 Ga0070705_100025575 3300005440 Bacteria 3201
17 Ga0070705_100055165 3300005440 Bacteria 2334
18 Ga0070694_100003850 3300005444 Bacteria 8966
19 Ga0070678_100003220 3300005456 Bacteria 9062
20 Ga0070681_10004455 3300005458 Bacteria 13340
21 Ga0070685_10015345 3300005466 Bacteria 4067
22 Ga0070707_100002678 3300005468 Bacteria 16931
23 Ga0070684_100011753 3300005535 Bacteria 6983
24 Ga0070672_100028729 3300005543 Bacteria 4162
25 Ga0070686_100033590 3300005544 Bacteria 3154
26 Ga0070695_100025839 3300005545 Bacteria 3628
27 Ga0070696_100010849 3300005546 Bacteria 6107
28 Ga0070696_100032063 3300005546 Bacteria 3604
29 Ga0070696_100067402 3300005546 Bacteria 2511
30 Ga0070665_100003283 3300005548 Bacteria 17362
31 Ga0070704_100017163 3300005549 Bacteria 4595
32 Ga0068855_100001071 3300005563 Bacteria 33976
33 Ga0068855_100001177 3300005563 Bacteria 32481
34 Ga0070664_100046745 3300005564 Bacteria 3657
35 Ga0068857_100000460 3300005577 Bacteria 28997
36 Ga0068854_100002583 3300005578 Bacteria 11214
37 Ga0068854_100071528 3300005578 Bacteria 2538
38 Ga0068856_100016471 3300005614 Bacteria 7155
39 Ga0068856_100079623 3300005614 Bacteria 3249
40 Ga0068852_100013044 3300005616 Bacteria 6343
41 Ga0068859_100003379 3300005617 Bacteria 16225
42 Ga0068864_100001521 3300005618 Bacteria 19072
43 Ga0068861_100050550 3300005719 Bacteria 3152
44 Ga0068863_100053472 3300005841 Bacteria 3828
45 Ga0068858_100010099 3300005842 Bacteria 8962
46 Ga0068858_100016810 3300005842 Bacteria 6871
47 Ga0068860_100023770 3300005843 Bacteria 5924
48 Ga0068862_100027172 3300005844 Bacteria 4816
49 Ga0081455_10037652 3300005937 Bacteria 4291
50 Ga0081539_10001441 3300005985 Bacteria 40731
51 Ga0070712_100000051 3300006175 Bacteria 62931
52 Ga0070712_100008289 3300006175 Bacteria 6530
53 Ga0070712_100020230 3300006175 Bacteria 4353
54 Ga0097621_100000737 3300006237 Bacteria 22940
55 Ga0068871_100000187 3300006358 Bacteria 42079
56 Ga0075430_100000061 3300006846 Bacteria 58211
57 Ga0075430_100100724 3300006846 Bacteria 2412
58 Ga0075431_100001669 3300006847 Bacteria 20817
59 Ga0075431_100011222 3300006847 Bacteria 9024
60 Ga0075431_100012911 3300006847 Bacteria 8431
61 Ga0075434_100000004 3300006871 Bacteria 112839
62 Ga0075429_100032300 3300006880 Bacteria 4550
63 Ga0068865_100008214 3300006881 Bacteria 6444
64 Ga0075436_100000024 3300006914 Bacteria 115057
65 Ga0075436_100037476 3300006914 Bacteria 3347
66 Ga0075436_100046243 3300006914 Bacteria 3002
67 Ga0097620_100003380 3300006931 Bacteria 16225
68 Ga0079104_1006627 3300006946 Bacteria 4343
69 Ga0075435_100016986 3300007076 Bacteria 5496
70 Ga0105240_10005616 3300009093 Bacteria 18619
71 Ga0105240_10006615 3300009093 Bacteria 17012
72 Ga0111539_10055207 3300009094 Bacteria 4723
73 Ga0105241_10021122 3300009174 Bacteria 4813
74 Ga0105242_10101627 3300009176 Bacteria 2437
75 Ga0105238_10001006 3300009551 Bacteria 28764
76 Ga0105238_10003071 3300009551 Bacteria 16643
77 Ga0105239_10053406 3300010375 Bacteria 4433
78 Ga0105239_10068722 3300010375 Bacteria 3893
79 Ga0157373_10022011 3300013100 Bacteria 4625
80 Ga0157370_10031293 3300013104 Bacteria 5207
81 Ga0157370_10031842 3300013104 Bacteria 5155
82 Ga0157369_10019820 3300013105 Bacteria 7526
83 Ga0157374_10001150 3300013296 Bacteria 22525
84 Ga0157378_10047377 3300013297 Bacteria 3822
85 Ga0163162_10007651 3300013306 Bacteria 10523
86 Ga0163162_10033032 3300013306 Bacteria 5140
87 Ga0163163_10001121 3300014325 Bacteria 22761
88 Ga0163163_10001751 3300014325 Bacteria 18286
89 Ga0163163_10063401 3300014325 Bacteria 3664
90 Ga0163163_10102813 3300014325 Bacteria 2882
91 Ga0157379_10000442 3300014968 Bacteria 33636
92 Ga0157376_10014476 3300014969 Bacteria 5923
93 Ga0157376_10073946 3300014969 Bacteria 2904
94 Ga0213872_10000484 3300021361 Bacteria 31963
95 Ga0213876_10006511 3300021384 Bacteria 6366
96 Ga0209758_1000032 3300025297 Bacteria 481623
97 Ga0207692_10003089 3300025898 Bacteria 6467
98 Ga0207680_10001770 3300025903 Bacteria 10198
99 Ga0207699_10000633 3300025906 Bacteria 17034
100 Ga0207707_10013043 3300025912 Bacteria 7237
101 Ga0207695_10000004 3300025913 Bacteria 1288665
102 Ga0207695_10069487 3300025913 Bacteria 3604
103 Ga0207693_10000052 3300025915 Bacteria 98125
104 Ga0207693_10001885 3300025915 Bacteria 18346
105 Ga0207693_10005066 3300025915 Bacteria 11059
106 Ga0207693_10051497 3300025915 Bacteria 3231
107 Ga0207663_10007456 3300025916 Bacteria 5674
108 Ga0207660_10001195 3300025917 Bacteria 17400
109 Ga0207657_10000815 3300025919 Bacteria 32909
110 Ga0207657_10001251 3300025919 Bacteria 27161
111 Ga0207649_10000381 3300025920 Bacteria 33129
112 Ga0207646_10007397 3300025922 Bacteria 11169
113 Ga0207646_10050917 3300025922 Bacteria 3706
114 Ga0207694_10000015 3300025924 Bacteria 363898
115 Ga0207700_10000014 3300025928 Bacteria 229475
116 Ga0207706_10029951 3300025933 Bacteria 4857
117 Ga0207686_10029726 3300025934 Bacteria 3227
118 Ga0207670_10032489 3300025936 Bacteria 3357
119 Ga0207669_10013425 3300025937 Bacteria 4067
120 Ga0207691_10019539 3300025940 Bacteria 6410
121 Ga0207711_10000323 3300025941 Bacteria 51404
122 Ga0207667_10000226 3300025949 Bacteria 79075
123 Ga0207667_10003938 3300025949 Bacteria 18268
124 Ga0207640_10004456 3300025981 Bacteria 7590
125 Ga0207677_10000457 3300026023 Bacteria 27426
126 Ga0207703_10018228 3300026035 Bacteria 5482
127 Ga0207702_10000011 3300026078 Bacteria 284514
128 Ga0207702_10024733 3300026078 Bacteria 4982
129 Ga0207641_10041000 3300026088 Bacteria 3879
130 Ga0207648_10004977 3300026089 Bacteria 13507
131 Ga0207676_10003720 3300026095 Bacteria 10786
132 Ga0207674_10000002 3300026116 Bacteria 279738
133 Ga0207674_10021094 3300026116 Bacteria 7024
134 Ga0207675_100003083 3300026118 Bacteria 16329
135 Ga0207675_100014428 3300026118 Bacteria 7367
136 Ga0207675_100081801 3300026118 Bacteria 3028
137 Ga0207683_10000360 3300026121 Bacteria 41821
138 Ga0207683_10005380 3300026121 Bacteria 10973
139 Ga0207698_10002329 3300026142 Bacteria 11247
140 Ga0209969_1001071 3300027360 Bacteria 3753
141 Ga0209971_1004039 3300027682 Bacteria 3471
142 Ga0209974_10002969 3300027876 Bacteria 6147
143 Ga0207428_10030941 3300027907 Bacteria 4421
144 Ga0268265_10027258 3300028380 Bacteria 4075
145 Ga0268264_10029941 3300028381 Bacteria 4463
146 Ga0265334_10013375 3300028573 Bacteria 3438
147 Ga0265318_10005440 3300028577 Bacteria 5981
148 Ga0265338_10000007 3300028800 Bacteria 498229
149 Ga0265338_10040875 3300028800 Bacteria 4347
150 Ga0307511_10003182 3300030521 Bacteria 16896
151 Ga0265332_10003805 3300031238 Bacteria 7212
152 Ga0265328_10007909 3300031239 Bacteria 4413
153 Ga0265320_10000209 3300031240 Bacteria 47757
154 Ga0265320_10001612 3300031240 Bacteria 16156
155 Ga0265325_10000001 3300031241 Bacteria 726814
156 Ga0265325_10000454 3300031241 Bacteria 29581
157 Ga0265325_10009469 3300031241 Bacteria 5685
158 Ga0265329_10009358 3300031242 Bacteria 3662
159 Ga0265339_10000291 3300031249 Bacteria 40638
160 Ga0265339_10000697 3300031249 Bacteria 26023
161 Ga0265339_10013633 3300031249 Bacteria 4922
162 Ga0265331_10001004 3300031250 Bacteria 22109
163 Ga0265331_10002670 3300031250 Bacteria 11934
164 Ga0265327_10000534 3300031251 Bacteria 65455
165 Ga0265327_10004361 3300031251 Bacteria 12574
166 Ga0265327_10012573 3300031251 Bacteria 5696
167 Ga0265316_10020294 3300031344 Bacteria 5662
168 Ga0265313_10000650 3300031595 Bacteria 35724
169 Ga0265313_10001574 3300031595 Bacteria 21173
170 Ga0265314_10006576 3300031711 Bacteria 10243
171 Ga0265314_10016175 3300031711 Bacteria 5906
172 Ga0265314_10017399 3300031711 Bacteria 5644
173 Ga0265342_10004748 3300031712 Bacteria 10567
174 Ga0265342_10008083 3300031712 Bacteria 7604
175 Ga0307411_10012808 3300032005 Bacteria 4597
176 Ga0373954_0000030 3300035118 Bacteria 55716
177 Ga0373954_0004317 3300035118 Bacteria 6110
178 Ga0373955_0039286 3300035172 Bacteria 2525
179 Ga0373927_0003541 3300035695 Bacteria 11163
180 Ga0373927_0033448 3300035695 Bacteria 3348
181 Ga0373933_0003530 3300035724 Bacteria 8706
182 Ga0373937_0003347 3300036401 Bacteria 13457
183 Ga0373937_0007557 3300036401 Bacteria 9412
184 Ga0373937_0015135 3300036401 Bacteria 6816
185 Ga0316584_0005797 3300036712 Bacteria 8334
186 Ga0395899_0000631 3300037312 Bacteria 36631
187 Ga0395901_0017735 3300038443 Bacteria 7267
188 Ga0436365_0467334 3300039437 Bacteria 13775
189 Ga0436365_0741489 3300039437 Bacteria 13833
190 Ga0436365_1797404 3300039437 Bacteria 129057
191 Ga0436361_0089124 3300039447 Bacteria 49334
192 Ga0439441_003527 3300042001 Bacteria 2315
193 Ga0439443_000012 3300042003 Bacteria 9350
194 Ga0439435_0000423 3300042436 Bacteria 6598
195 Ga0439435_0001324 3300042436 Bacteria 4519
196 Ga0466969_0007111 3300044656 Bacteria 5956
197 Ga0466966_0008550 3300044684 Bacteria 6776
198 Ga0466961_0000438 3300044693 Bacteria 26525
199 Ga0453684_0022763 3300044712 Bacteria 9278
200 Ga0466959_0023793 3300045049 Bacteria 4535
201 Ga0466959_0050194 3300045049 Bacteria 3063
202 Ga0451576_0035874 3300045051 Bacteria 5259
203 Ga0495603_0034663 3300046455 Bacteria 3034
204 Ga0495652_0030433 3300046529 Bacteria 4736
205 Ga0495621_0006933 3300046539 Bacteria 3333
206 Ga0495645_0012117 3300046543 Bacteria 6075
207 Ga0495645_0057830 3300046543 Bacteria 2814
208 Ga0495661_0000556 3300046665 Archaea 38611
209 Ga0495600_0023760 3300046809 Bacteria 3944
210 Ga0495581_0007486 3300047315 Bacteria 6314
211 Ga0495680_0046667 3300047322 Bacteria 3414
212 Ga0495683_0000001 3300047323 Unclassified 2230803
213 Ga0496101_0010882 3300048904 Bacteria 6021
214 Ga0496104_0000896 3300048907 Bacteria 25644
215 Ga0496104_0035799 3300048907 Bacteria 4637
216 Ga0496105_0001249 3300048908 Bacteria 17756
217 Ga0496105_0045574 3300048908 Bacteria 3618
218 Ga0496110_0053052 3300048913 Bacteria 3563
219 Ga0496112_0001140 3300048915 Bacteria 19789
220 Ga0496115_0005825 3300048918 Bacteria 8980
221 Ga0496115_0006345 3300048918 Bacteria 8661
222 Ga0496121_0000894 3300048924 Bacteria 53831
223 Ga0496124_0007290 3300048927 Bacteria 11796
224 Ga0496126_0017927 3300048929 Bacteria 7042
225 Ga0501031_0002453 3300049568 Bacteria 11821
226 Ga0501032_0001258 3300049569 Bacteria 20325
227 Ga0501032_0003843 3300049569 Bacteria 11409
228 Ga0501032_0048352 3300049569 Bacteria 2872
229 Ga0501034_0007712 3300049571 Bacteria 11450
230 Ga0501034_0028709 3300049571 Bacteria 5660
231 Ga0501034_0031435 3300049571 Bacteria 5391
232 Ga0501034_0076325 3300049571 Bacteria 3358
233 Ga0501034_0079960 3300049571 Bacteria 3273
234 Ga0501036_0000327 3300049572 Bacteria 33144
235 Ga0501036_0007388 3300049572 Bacteria 8953
236 Ga0501037_0011674 3300049573 Bacteria 6467
237 Ga0501038_0008768 3300049574 Bacteria 9276
238 Ga0501038_0013993 3300049574 Bacteria 7312
239 Ga0501038_0040753 3300049574 Bacteria 4052
240 Ga0501040_0008675 3300049576 Bacteria 6601
241 Ga0501040_0059653 3300049576 Bacteria 2622
242 Ga0501041_0016814 3300049577 Bacteria 4353
243 Ga0501042_0008159 3300049578 Bacteria 6899
244 Ga0501042_0012538 3300049578 Bacteria 5744
245 Ga0501046_0003291 3300049580 Bacteria 14844
246 Ga0501046_0008018 3300049580 Bacteria 9232
247 Ga0501046_0021218 3300049580 Bacteria 5362
248 Ga0501047_0005566 3300049581 Bacteria 11860
249 Ga0501047_0070071 3300049581 Bacteria 3376
250 Ga0501048_0002407 3300049582 Bacteria 14278
251 Ga0501067_0002203 3300049583 Bacteria 10766
252 Ga0501067_0043966 3300049583 Bacteria 2481
253 Ga0501069_0003039 3300049585 Bacteria 8617
254 Ga0501071_0009511 3300049587 Bacteria 6479
255 Ga0501072_0002502 3300049588 Bacteria 13767
256 Ga0501072_0005271 3300049588 Bacteria 9846
257 Ga0501074_0002366 3300049590 Bacteria 13131
258 Ga0501075_0130697 3300049591 Bacteria 1913
259 Ga0501076_0000054 3300049592 Bacteria 56703
260 Ga0501079_0006103 3300049741 Bacteria 9032
261 Ga0501079_0073805 3300049741 Bacteria 2637
262 Ga0501080_0001043 3300049742 Bacteria 22787
263 Ga0501080_0007362 3300049742 Bacteria 9934
264 Ga0501081_0022538 3300049743 Bacteria 4215
265 Ga0501083_0000426 3300049744 Bacteria 27116
266 Ga0501035_0000712 3300049822 Bacteria 35996
267 Ga0501035_0000973 3300049822 Bacteria 30267
268 Ga0501035_0003863 3300049822 Bacteria 14287
269 Ga0501035_0005381 3300049822 Bacteria 12104
270 Ga0501035_0017846 3300049822 Bacteria 6546
271 Ga0501044_0001321 3300049823 Bacteria 29184
272 Ga0501044_0002266 3300049823 Bacteria 21944
273 Ga0501044_0002376 3300049823 Bacteria 21434
274 Ga0501044_0002872 3300049823 Bacteria 19620
275 Ga0501044_0010089 3300049823 Bacteria 10264
276 Ga0501044_0097480 3300049823 Bacteria 2961
277 Ga0501045_0148654 3300049824 Bacteria 1743
278 nmdc:mga0qj67_53169_c1 3300050509 Bacteria 3206
279 nmdc:mga0qj67_85_c1 3300050509 Bacteria 63210
280 nmdc:mga06r32_135630_c1 3300050510 Bacteria 2436
281 nmdc:mga06r32_36657_c1 3300050510 Bacteria 4636
282 nmdc:mga06r32_3725_c1 3300050510 Bacteria 13640
283 nmdc:mga06r32_8682_c1 3300050510 Bacteria 9159
284 nmdc:mga08y16_24685_c1 3300050511 Bacteria 6344
285 nmdc:mga0n895_1072_c1 3300050512 Bacteria 19957
286 nmdc:mga0n895_81506_c1 3300050512 Bacteria 3224
287 nmdc:mga0rr50_9530_c1 3300050513 Bacteria 6110
288 nmdc:mga08x19_46569_c1 3300050514 Bacteria 2774
289 nmdc:mga08x19_86_c1 3300050514 Bacteria 83486
290 Ga0500573_0000062 3300053140 Bacteria 67407
291 Ga0500604_0001376 3300053151 Bacteria 6785
292 Ga0501084_0004763 3300054114 Bacteria 11091
293 Ga0501082_0006484 3300060353 Bacteria 10143
294 Ga0501082_0008764 3300060353 Bacteria 8719
295 Ga0530510_0000037 3300061734 Bacteria 60389

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049824 Ga0501045_0148654 Ga0501045_0148654_11_1726 515
2 3300049591 Ga0501075_0130697 Ga0501075_0130697_23_1777 568
3 3300009176 Ga0105242_10101627 Ga0105242_101016272 575
4 3300042003 Ga0439443_000012 Ga0439443_000012_664_2649 602
5 3300042001 Ga0439441_003527 Ga0439441_003527_54_2039 604
6 3300042436 Ga0439435_0001324 Ga0439435_0001324_1886_3871 604
7 3300006871 Ga0075434_100000004 Ga0075434_10000000445 615
8 3300050512 nmdc:mga0n895_1072_c1 nmdc:mga0n895_1072_c1_17729_19711 615
9 3300005544 Ga0070686_100033590 Ga0070686_1000335902 618
10 3300005843 Ga0068860_100023770 Ga0068860_1000237702 618
11 3300028381 Ga0268264_10029941 Ga0268264_100299412 618
12 3300005340 Ga0070689_100053147 Ga0070689_1000531472 619
13 3300005440 Ga0070705_100025575 Ga0070705_1000255752 619
14 3300005546 Ga0070696_100032063 Ga0070696_1000320632 619
15 3300025936 Ga0207670_10032489 Ga0207670_100324892 619
16 3300026118 Ga0207675_100003083 Ga0207675_1000030838 619
17 3300005440 Ga0070705_100055165 Ga0070705_1000551652 631
18 3300005444 Ga0070694_100003850 Ga0070694_1000038506 631
19 3300005545 Ga0070695_100025839 Ga0070695_1000258392 631
20 3300005546 Ga0070696_100067402 Ga0070696_1000674022 631
21 3300005549 Ga0070704_100017163 Ga0070704_1000171633 631
22 3300006914 Ga0075436_100046243 Ga0075436_1000462432 631
23 3300005985 Ga0081539_10001441 Ga0081539_1000144125 633
24 3300048918 Ga0496115_0006345 Ga0496115_0006345_1099_3120 633
25 3300026118 Ga0207675_100014428 Ga0207675_1000144283 635
26 3300049587 Ga0501071_0009511 Ga0501071_0009511_1063_3144 637
27 3300049742 Ga0501080_0007362 Ga0501080_0007362_1393_3474 637
28 3300005356 Ga0070674_100004938 Ga0070674_1000049385 638
29 3300005456 Ga0070678_100003220 Ga0070678_1000032204 638
30 3300005543 Ga0070672_100028729 Ga0070672_1000287293 638
31 3300005548 Ga0070665_100003283 Ga0070665_1000032835 638
32 3300014325 Ga0163163_10063401 Ga0163163_100634012 638
33 3300014969 Ga0157376_10014476 Ga0157376_100144763 638
34 3300025937 Ga0207669_10013425 Ga0207669_100134253 638
35 3300025940 Ga0207691_10019539 Ga0207691_100195393 638
36 3300026121 Ga0207683_10005380 Ga0207683_100053804 638
37 3300049576 Ga0501040_0008675 Ga0501040_0008675_689_2671 638
38 3300048927 Ga0496124_0007290 Ga0496124_0007290_7390_9453 639
39 3300006846 Ga0075430_100000061 Ga0075430_10000006146 644
40 3300009094 Ga0111539_10055207 Ga0111539_100552073 644
41 3300027907 Ga0207428_10030941 Ga0207428_100309412 644
42 3300050509 nmdc:mga0qj67_85_c1 nmdc:mga0qj67_85_c1_6818_8797 644
43 3300050510 nmdc:mga06r32_135630_c1 nmdc:mga06r32_135630_c1_198_2177 644
44 3300050511 nmdc:mga08y16_24685_c1 nmdc:mga08y16_24685_c1_4206_6185 644
45 3300005353 Ga0070669_100006345 Ga0070669_1000063453 645
46 3300005719 Ga0068861_100050550 Ga0068861_1000505502 645
47 3300005844 Ga0068862_100027172 Ga0068862_1000271724 645
48 3300006881 Ga0068865_100008214 Ga0068865_1000082141 645
49 3300026089 Ga0207648_10004977 Ga0207648_100049771 645
50 3300026118 Ga0207675_100081801 Ga0207675_1000818011 645
51 3300027682 Ga0209971_1004039 Ga0209971_10040392 645
52 3300028380 Ga0268265_10027258 Ga0268265_100272583 645
53 3300035118 Ga0373954_0000030 Ga0373954_0000030_10916_12925 645
54 3300036401 Ga0373937_0003347 Ga0373937_0003347_4824_6833 645
55 3300042436 Ga0439435_0000423 Ga0439435_0000423_1040_3022 645
56 3300049576 Ga0501040_0059653 Ga0501040_0059653_562_2547 645
57 3300049577 Ga0501041_0016814 Ga0501041_0016814_1780_3765 645
58 3300049578 Ga0501042_0008159 Ga0501042_0008159_1040_3025 645
59 3300049588 Ga0501072_0005271 Ga0501072_0005271_328_2313 645
60 3300049592 Ga0501076_0000054 Ga0501076_0000054_43380_45365 645
61 3300049743 Ga0501081_0022538 Ga0501081_0022538_1054_3039 645
62 3300060353 Ga0501082_0006484 Ga0501082_0006484_1081_3066 645
63 3300061734 Ga0530510_0000037 Ga0530510_0000037_54150_56135 645
64 3300005563 Ga0068855_100001177 Ga0068855_10000117731 646
65 3300025949 Ga0207667_10003938 Ga0207667_100039389 646
66 3300035695 Ga0373927_0003541 Ga0373927_0003541_5140_7179 647
67 3300006847 Ga0075431_100012911 Ga0075431_1000129114 649
68 3300006880 Ga0075429_100032300 Ga0075429_1000323003 649
69 3300049571 Ga0501034_0007712 Ga0501034_0007712_121_2286 649
70 3300049572 Ga0501036_0000327 Ga0501036_0000327_15155_17320 649
71 3300049574 Ga0501038_0008768 Ga0501038_0008768_5864_8029 649
72 3300050510 nmdc:mga06r32_8682_c1 nmdc:mga06r32_8682_c1_2980_5064 649
73 3300047323 Ga0495683_0000001 Ga0495683_0000001_1539428_1541518 650
74 3300005546 Ga0070696_100010849 Ga0070696_1000108496 651
75 3300030521 Ga0307511_10003182 Ga0307511_100031825 652
76 3300049571 Ga0501034_0076325 Ga0501034_0076325_871_2907 652
77 3300053151 Ga0500604_0001376 Ga0500604_0001376_2902_4944 652
78 3300005458 Ga0070681_10004455 Ga0070681_100044552 654
79 3300005468 Ga0070707_100002678 Ga0070707_1000026789 654
80 3300025912 Ga0207707_10013043 Ga0207707_100130433 654
81 3300025922 Ga0207646_10050917 Ga0207646_100509172 654
82 3300027360 Ga0209969_1001071 Ga0209969_10010712 655
83 3300027876 Ga0209974_10002969 Ga0209974_100029693 655
84 3300028577 Ga0265318_10005440 Ga0265318_100054403 655
85 3300031238 Ga0265332_10003805 Ga0265332_100038054 655
86 3300031239 Ga0265328_10007909 Ga0265328_100079092 655
87 3300031251 Ga0265327_10000534 Ga0265327_1000053414 655
88 3300031711 Ga0265314_10006576 Ga0265314_100065766 655
89 3300031712 Ga0265342_10008083 Ga0265342_100080833 655
90 3300046665 Ga0495661_0000556 Ga0495661_0000556_10508_12580 655
91 3300031250 Ga0265331_10002670 Ga0265331_100026706 656
92 3300031251 Ga0265327_10012573 Ga0265327_100125733 656
93 3300032005 Ga0307411_10012808 Ga0307411_100128083 656
94 3300044712 Ga0453684_0022763 Ga0453684_0022763_7167_9218 656
95 3300045051 Ga0451576_0035874 Ga0451576_0035874_454_2523 656
96 iso_pu_bacteria 8055225921 8055227983 656
97 3300006946 Ga0079104_1006627 Ga0079104_10066272 657
98 3300009093 Ga0105240_10006615 Ga0105240_100066158 658
99 3300021361 Ga0213872_10000484 Ga0213872_1000048425 658
100 3300039447 Ga0436361_0089124 Ga0436361_0089124_22237_24372 658
101 3300049568 Ga0501031_0002453 Ga0501031_0002453_2281_4425 659
102 3300049569 Ga0501032_0001258 Ga0501032_0001258_4923_6950 659
103 3300049580 Ga0501046_0003291 Ga0501046_0003291_3665_5809 659
104 3300049822 Ga0501035_0000973 Ga0501035_0000973_16582_18726 659
105 3300049823 Ga0501044_0002872 Ga0501044_0002872_2211_4355 659
106 3300005330 Ga0070690_100003034 Ga0070690_1000030346 660
107 3300005335 Ga0070666_10001296 Ga0070666_100012963 660
108 3300005345 Ga0070692_10044614 Ga0070692_100446142 660
109 3300005436 Ga0070713_100001718 Ga0070713_1000017187 660
110 3300005437 Ga0070710_10019028 Ga0070710_100190281 660
111 3300005439 Ga0070711_100001570 Ga0070711_1000015708 660
112 3300005440 Ga0070705_100007222 Ga0070705_1000072223 660
113 3300005466 Ga0070685_10015345 Ga0070685_100153453 660
114 3300005535 Ga0070684_100011753 Ga0070684_1000117533 660
115 3300005578 Ga0068854_100002583 Ga0068854_1000025835 660
116 3300005614 Ga0068856_100079623 Ga0068856_1000796233 660
117 3300005617 Ga0068859_100003379 Ga0068859_10000337912 660
118 3300005618 Ga0068864_100001521 Ga0068864_1000015214 660
119 3300005842 Ga0068858_100010099 Ga0068858_1000100998 660
120 3300006175 Ga0070712_100008289 Ga0070712_1000082895 660
121 3300006175 Ga0070712_100020230 Ga0070712_1000202304 660
122 3300006931 Ga0097620_100003380 Ga0097620_10000338012 660
123 3300010375 Ga0105239_10068722 Ga0105239_100687223 660
124 3300013296 Ga0157374_10001150 Ga0157374_100011506 660
125 3300013297 Ga0157378_10047377 Ga0157378_100473773 660
126 3300013306 Ga0163162_10007651 Ga0163162_100076516 660
127 3300013306 Ga0163162_10033032 Ga0163162_100330323 660
128 3300014325 Ga0163163_10001121 Ga0163163_1000112121 660
129 3300014969 Ga0157376_10073946 Ga0157376_100739462 660
130 3300025898 Ga0207692_10003089 Ga0207692_100030892 660
131 3300025903 Ga0207680_10001770 Ga0207680_100017703 660
132 3300025915 Ga0207693_10001885 Ga0207693_100018855 660
133 3300025915 Ga0207693_10051497 Ga0207693_100514972 660
134 3300025916 Ga0207663_10007456 Ga0207663_100074564 660
135 3300025919 Ga0207657_10001251 Ga0207657_1000125118 660
136 3300025933 Ga0207706_10029951 Ga0207706_100299513 660
137 3300025934 Ga0207686_10029726 Ga0207686_100297262 660
138 3300025941 Ga0207711_10000323 Ga0207711_1000032344 660
139 3300025981 Ga0207640_10004456 Ga0207640_100044563 660
140 3300026023 Ga0207677_10000457 Ga0207677_1000045715 660
141 3300026078 Ga0207702_10024733 Ga0207702_100247332 660
142 3300026095 Ga0207676_10003720 Ga0207676_100037209 660
143 3300026116 Ga0207674_10021094 Ga0207674_100210943 660
144 3300026121 Ga0207683_10000360 Ga0207683_1000036039 660
145 3300035118 Ga0373954_0004317 Ga0373954_0004317_178_2214 660
146 3300035695 Ga0373927_0033448 Ga0373927_0033448_879_2915 660
147 3300035724 Ga0373933_0003530 Ga0373933_0003530_2791_4827 660
148 3300046455 Ga0495603_0034663 Ga0495603_0034663_963_2999 660
149 3300046539 Ga0495621_0006933 Ga0495621_0006933_1277_3313 660
150 3300046543 Ga0495645_0012117 Ga0495645_0012117_2646_4682 660
151 3300046543 Ga0495645_0057830 Ga0495645_0057830_72_2108 660
152 3300046809 Ga0495600_0023760 Ga0495600_0023760_979_3015 660
153 3300047315 Ga0495581_0007486 Ga0495581_0007486_4268_6304 660
154 3300047322 Ga0495680_0046667 Ga0495680_0046667_1022_3058 660
155 3300048904 Ga0496101_0010882 Ga0496101_0010882_87_2123 660
156 3300048907 Ga0496104_0035799 Ga0496104_0035799_307_2343 660
157 3300048908 Ga0496105_0045574 Ga0496105_0045574_1543_3579 660
158 3300048915 Ga0496112_0001140 Ga0496112_0001140_4700_6736 660
159 3300050512 nmdc:mga0n895_81506_c1 nmdc:mga0n895_81506_c1_283_2319 660
160 3300026035 Ga0207703_10018228 Ga0207703_100182283 661
161 3300044656 Ga0466969_0007111 Ga0466969_0007111_996_3422 662
162 3300044684 Ga0466966_0008550 Ga0466966_0008550_1798_4224 662
163 3300044693 Ga0466961_0000438 Ga0466961_0000438_804_3230 662
164 3300045049 Ga0466959_0023793 Ga0466959_0023793_1028_3472 662
165 3300045049 Ga0466959_0050194 Ga0466959_0050194_97_2523 662
166 iso_pu_bacteria 2739367655 2739612147 662
167 iso_pu_bacteria 2881927736 2881930252 663
168 3300025922 Ga0207646_10007397 Ga0207646_100073976 664
169 3300049574 Ga0501038_0013993 Ga0501038_0013993_1374_3449 664
170 3300049822 Ga0501035_0005381 Ga0501035_0005381_6040_8115 664
171 3300049823 Ga0501044_0002376 Ga0501044_0002376_11754_13829 664
172 iso_pu_bacteria 2887375801 2887377853 665
173 3300005344 Ga0070661_100000043 Ga0070661_100000043100 666
174 3300025920 Ga0207649_10000381 Ga0207649_1000038113 666
175 3300046529 Ga0495652_0030433 Ga0495652_0030433_455_2611 671
176 3300014325 Ga0163163_10001751 Ga0163163_1000175113 672
177 3300048908 Ga0496105_0001249 Ga0496105_0001249_4971_7067 672
178 3300048918 Ga0496115_0005825 Ga0496115_0005825_4900_6996 672
179 3300031240 Ga0265320_10000209 Ga0265320_100002095 673
180 3300031241 Ga0265325_10000454 Ga0265325_1000045418 673
181 3300031241 Ga0265325_10009469 Ga0265325_100094693 673
182 3300031249 Ga0265339_10000697 Ga0265339_1000069711 673
183 3300031344 Ga0265316_10020294 Ga0265316_100202943 673
184 3300031595 Ga0265313_10001574 Ga0265313_1000157416 673
185 3300037312 Ga0395899_0000631 Ga0395899_0000631_729_2819 674
186 3300038443 Ga0395901_0017735 Ga0395901_0017735_1406_3496 674
187 3300005616 Ga0068852_100013044 Ga0068852_1000130445 675
188 3300009551 Ga0105238_10003071 Ga0105238_100030719 675
189 3300025924 Ga0207694_10000015 Ga0207694_10000015197 675
190 3300026142 Ga0207698_10002329 Ga0207698_100023297 675
191 3300031240 Ga0265320_10001612 Ga0265320_100016122 675
192 3300005563 Ga0068855_100001071 Ga0068855_10000107117 677
193 3300025913 Ga0207695_10000004 Ga0207695_10000004168 677
194 3300025949 Ga0207667_10000226 Ga0207667_1000022615 677
195 3300005435 Ga0070714_100015132 Ga0070714_1000151322 681
196 3300006847 Ga0075431_100001669 Ga0075431_1000016698 681
197 3300050510 nmdc:mga06r32_3725_c1 nmdc:mga06r32_3725_c1_7400_9544 681
198 iso_pu_bacteria 2891088606 2891091698 681
199 3300028573 Ga0265334_10013375 Ga0265334_100133752 682
200 3300028800 Ga0265338_10000007 Ga0265338_10000007102 682
201 3300031241 Ga0265325_10000001 Ga0265325_10000001685 682
202 3300031242 Ga0265329_10009358 Ga0265329_100093582 682
203 3300031249 Ga0265339_10000291 Ga0265339_1000029111 682
204 3300031595 Ga0265313_10000650 Ga0265313_100006508 682
205 3300031712 Ga0265342_10004748 Ga0265342_100047486 682
206 3300048924 Ga0496121_0000894 Ga0496121_0000894_2782_4896 685
207 3300048929 Ga0496126_0017927 Ga0496126_0017927_4433_6547 685
208 3300049571 Ga0501034_0031435 Ga0501034_0031435_2959_5112 687
209 3300049580 Ga0501046_0008018 Ga0501046_0008018_4776_6944 687
210 3300049822 Ga0501035_0017846 Ga0501035_0017846_4317_6470 687
211 3300005842 Ga0068858_100016810 Ga0068858_1000168103 688
212 3300014968 Ga0157379_10000442 Ga0157379_100004428 688
213 3300031250 Ga0265331_10001004 Ga0265331_100010047 689
214 3300031251 Ga0265327_10004361 Ga0265327_100043611 689
215 3300049581 Ga0501047_0005566 Ga0501047_0005566_3159_5312 689
216 3300049583 Ga0501067_0043966 Ga0501067_0043966_269_2422 689
217 3300049588 Ga0501072_0002502 Ga0501072_0002502_9631_11784 689
218 3300049741 Ga0501079_0073805 Ga0501079_0073805_67_2220 689
219 3300021384 Ga0213876_10006511 Ga0213876_100065112 690
220 3300039437 Ga0436365_0467334 Ga0436365_0467334_5009_7144 690
221 3300039437 Ga0436365_0741489 Ga0436365_0741489_10835_12994 690
222 3300039437 Ga0436365_1797404 Ga0436365_1797404_25091_27247 690
223 3300005436 Ga0070713_100000001 Ga0070713_1000000015 691
224 3300005937 Ga0081455_10037652 Ga0081455_100376522 691
225 3300006175 Ga0070712_100000051 Ga0070712_1000000515 691
226 3300006846 Ga0075430_100100724 Ga0075430_1001007242 691
227 3300006847 Ga0075431_100011222 Ga0075431_1000112225 691
228 3300006914 Ga0075436_100000024 Ga0075436_10000002412 691
229 3300007076 Ga0075435_100016986 Ga0075435_1000169862 691
230 3300014325 Ga0163163_10102813 Ga0163163_101028132 691
231 3300025906 Ga0207699_10000633 Ga0207699_100006336 691
232 3300025915 Ga0207693_10000052 Ga0207693_100000528 691
233 3300025928 Ga0207700_10000014 Ga0207700_1000001430 691
234 3300026078 Ga0207702_10000011 Ga0207702_10000011255 691
235 3300031249 Ga0265339_10013633 Ga0265339_100136333 691
236 3300036712 Ga0316584_0005797 Ga0316584_0005797_4734_6896 691
237 3300048907 Ga0496104_0000896 Ga0496104_0000896_8236_10368 691
238 3300048913 Ga0496110_0053052 Ga0496110_0053052_1379_3514 691
239 3300049569 Ga0501032_0048352 Ga0501032_0048352_126_2345 691
240 3300049571 Ga0501034_0079960 Ga0501034_0079960_849_3239 691
241 3300049574 Ga0501038_0040753 Ga0501038_0040753_148_2367 691
242 3300049742 Ga0501080_0001043 Ga0501080_0001043_12311_14530 691
243 3300049822 Ga0501035_0000712 Ga0501035_0000712_19203_21422 691
244 3300049823 Ga0501044_0001321 Ga0501044_0001321_25205_27424 691
245 3300049823 Ga0501044_0097480 Ga0501044_0097480_503_2893 691
246 3300050509 nmdc:mga0qj67_53169_c1 nmdc:mga0qj67_53169_c1_974_3115 691
247 3300050510 nmdc:mga06r32_36657_c1 nmdc:mga06r32_36657_c1_1363_3504 691
248 3300050514 nmdc:mga08x19_86_c1 nmdc:mga08x19_86_c1_46090_48252 691
249 3300049573 Ga0501037_0011674 Ga0501037_0011674_201_2402 693
250 3300049822 Ga0501035_0003863 Ga0501035_0003863_3540_5741 693
251 3300049823 Ga0501044_0002266 Ga0501044_0002266_15302_17503 693
252 3300005841 Ga0068863_100053472 Ga0068863_1000534723 694
253 3300026088 Ga0207641_10041000 Ga0207641_100410003 694
254 3300003215 JGI25153J46596_10001882 JGI25153J46596_100018828 696
255 3300005341 Ga0070691_10001432 Ga0070691_100014326 696
256 3300005564 Ga0070664_100046745 Ga0070664_1000467452 696
257 3300005577 Ga0068857_100000460 Ga0068857_10000046017 696
258 3300005578 Ga0068854_100071528 Ga0068854_1000715282 696
259 3300005614 Ga0068856_100016471 Ga0068856_1000164715 696
260 3300006237 Ga0097621_100000737 Ga0097621_10000073715 696
261 3300006358 Ga0068871_100000187 Ga0068871_10000018715 696
262 3300006914 Ga0075436_100037476 Ga0075436_1000374762 696
263 3300009093 Ga0105240_10005616 Ga0105240_1000561618 696
264 3300009174 Ga0105241_10021122 Ga0105241_100211222 696
265 3300009551 Ga0105238_10001006 Ga0105238_100010064 696
266 3300010375 Ga0105239_10053406 Ga0105239_100534063 696
267 3300013100 Ga0157373_10022011 Ga0157373_100220112 696
268 3300013104 Ga0157370_10031293 Ga0157370_100312932 696
269 3300013104 Ga0157370_10031842 Ga0157370_100318422 696
270 3300013105 Ga0157369_10019820 Ga0157369_100198204 696
271 3300025297 Ga0209758_1000032 Ga0209758_1000032335 696
272 3300025913 Ga0207695_10069487 Ga0207695_100694872 696
273 3300025915 Ga0207693_10005066 Ga0207693_100050662 696
274 3300025917 Ga0207660_10001195 Ga0207660_1000119513 696
275 3300025919 Ga0207657_10000815 Ga0207657_1000081510 696
276 3300026116 Ga0207674_10000002 Ga0207674_10000002250 696
277 3300028800 Ga0265338_10040875 Ga0265338_100408752 696
278 3300031711 Ga0265314_10016175 Ga0265314_100161752 696
279 3300031711 Ga0265314_10017399 Ga0265314_100173992 696
280 3300035172 Ga0373955_0039286 Ga0373955_0039286_113_2275 696
281 3300036401 Ga0373937_0007557 Ga0373937_0007557_3037_5196 696
282 3300036401 Ga0373937_0015135 Ga0373937_0015135_1534_3696 696
283 3300049569 Ga0501032_0003843 Ga0501032_0003843_8973_11132 696
284 3300049571 Ga0501034_0028709 Ga0501034_0028709_2855_5014 696
285 3300049572 Ga0501036_0007388 Ga0501036_0007388_220_2379 696
286 3300049578 Ga0501042_0012538 Ga0501042_0012538_2818_4977 696
287 3300049580 Ga0501046_0021218 Ga0501046_0021218_647_2806 696
288 3300049581 Ga0501047_0070071 Ga0501047_0070071_637_2793 696
289 3300049582 Ga0501048_0002407 Ga0501048_0002407_6152_8311 696
290 3300049583 Ga0501067_0002203 Ga0501067_0002203_3076_5235 696
291 3300049585 Ga0501069_0003039 Ga0501069_0003039_95_2254 696
292 3300049590 Ga0501074_0002366 Ga0501074_0002366_2474_4633 696
293 3300049741 Ga0501079_0006103 Ga0501079_0006103_2733_4892 696
294 3300049744 Ga0501083_0000426 Ga0501083_0000426_22253_24412 696
295 3300049823 Ga0501044_0010089 Ga0501044_0010089_6090_8249 696
296 3300050513 nmdc:mga0rr50_9530_c1 nmdc:mga0rr50_9530_c1_2274_4436 696
297 3300050514 nmdc:mga08x19_46569_c1 nmdc:mga08x19_46569_c1_533_2695 696
298 3300053140 Ga0500573_0000062 Ga0500573_0000062_55331_57484 696
299 3300054114 Ga0501084_0004763 Ga0501084_0004763_278_2437 696
300 3300060353 Ga0501082_0008764 Ga0501082_0008764_2220_4379 696

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03119

DNA_ligase_ZBD

NAD-dependent DNA ligase C4 zinc finger domain

437

464

0.98

PF03120

DNA_ligase_OB

NAD-dependent DNA ligase OB-fold domain

336

414

0.97

PF12826

HHH_2

Helix-hairpin-helix motif

557

620

0.97

PF00533

BRCT

BRCA1 C Terminus (BRCT) domain

730

806

0.95

PF01653

DNA_ligase_aden

NAD-dependent DNA ligase adenylation domain

71

333

0.94

PF22745

Nlig-Ia

DNA ligase-like, N-terminal NAD+-binding domain

9

64

0.92

PF12738

PTCB-BRCT

twin BRCT domain

739

798

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4glw-assembly1.cif.gz_A dna ligase a in complex with inhibitor 0.9539 50 327
4glw-assembly1.cif.gz_B dna ligase a in complex with inhibitor 0.9534 47 326
4lh7-assembly1.cif.gz_A crystal structure of a liga inhibitor 0.9461 8 326
3jsn-assembly1.cif.gz_A crystal structure of the adenylation domain of nad+-dependent dna ligase from staphylococcus aureus 0.9387 16 325
4glw-assembly1.cif.gz_A dna ligase a in complex with inhibitor 0.9304 50 327
ID Description Score Start End Superfamily
af_Q2G1Y0_587_666_3.40.50.10190 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;BRCT domain 0.9874 624 693 3.40.50.10190
4lh7A01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.984 8 71 1.10.287.610
af_P15042_588_670_3.40.50.10190 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;BRCT domain 0.9829 622 696 3.40.50.10190
af_P15042_317_390_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9794 329 400 2.40.50.140
1taeD01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9732 8 63 1.10.287.610
ID Description Score Start End GO Terms
AF-A0A529UDK6-F1-model_v4 deleted 0.9941 135 321
AF-A0A526YGP1-F1-model_v4 NAD-dependent DNA ligase LigA 0.9938 222 325 GO:0003911
AF-A0A358HP82-F1-model_v4 DNA ligase (NAD(+)) LigA 0.9873 125 243 GO:0003911
GO:0006281
AF-A0A526YGP1-F1-model_v4 NAD-dependent DNA ligase LigA 0.9843 222 325 GO:0003911
AF-A0A529UDK6-F1-model_v4 deleted 0.9837 135 321

Feature Viewer

pLDDT pTM Quality
89.44 0.57 Medium
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Predicted Structure (AlphaFold2)

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