F395369

General Info

Members Datasets Scaffolds Average Seq Length
300 221 600 106

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10167302|Ga0157375_101673022
Length 115
Sequence MPTIHYILQDGSRRSVDAKPGSSVMENAINGNVRGIDAECGGSCACATCHVYVDDAFIGRLPSADEMEGELLDAVAAGRLPSSRLSCQLTMTAELDGLTVRIPETQSCCPPPAPW

Samples

Sample ID Description Type Environment
1 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
2 3300000043 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere Metagenome Rhizosphere
3 3300000652 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Col-0 young rhizosphere DNA Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
20 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
23 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
24 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
25 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
26 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
41 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
42 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
57 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
58 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
59 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
62 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
63 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
94 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
95 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
96 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
97 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
98 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
99 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
100 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
101 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
102 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
103 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
104 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
105 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
106 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
107 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
113 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
114 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
115 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
118 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
119 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
120 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
121 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
122 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
123 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
124 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
125 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
126 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
127 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
128 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
129 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
130 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
131 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
132 3300042116 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126F_E14_082316_1792 Metagenome Rhizosphere
133 3300042123 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_082716_2228 Metagenome Rhizosphere
134 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
135 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
136 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
137 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
138 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
139 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
140 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
141 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
142 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
143 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
144 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
145 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
146 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
147 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
148 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
149 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
150 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
151 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
152 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
153 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
154 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
155 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
156 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
157 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
158 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
159 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
160 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
161 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
162 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
163 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
164 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
165 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
166 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
167 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
168 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
169 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
170 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
171 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
172 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
173 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
174 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
175 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
176 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
177 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
178 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
179 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
180 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
181 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
182 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
183 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
184 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
185 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
188 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
189 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
190 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
191 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
192 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
193 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
194 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
195 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
196 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
197 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
198 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
199 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
200 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
201 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
202 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
203 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
204 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
205 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
206 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
207 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
208 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
209 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
210 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
211 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
212 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
213 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
214 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
215 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
216 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
217 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
218 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
219 2842733646 Variovorax sp. R-72446 Isolate Unclassified
220 2929520902 Variovorax beijingensis 502 Isolate Unclassified
221 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.67
Metatranscriptomes 0
Isolates 1.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.67
Nodule 0
Rhizoplane 3.67
Rhizosphere 64.67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157375_10167302 3300013308 Bacteria 2344
2 ARcpr5yngRDRAFT_c005498 3300000043 Bacteria 1164
3 ARCol0yngRDRAFT_1003095 3300000652 Bacteria 1225
4 JGI24751J29686_10008675 3300002459 Bacteria 2082
5 JGI25150J39212_1043398 3300002774 Bacteria 574
6 JGI25151J46595_10002707 3300003187 Bacteria 10347
7 JGI25153J46596_10010377 3300003215 Bacteria 4217
8 rootL2_10038463 3300003322 Bacteria 4252
9 rootH1_10019228 3300003323 Bacteria 6851
10 rootH1_10179193 3300003323 Bacteria 1858
11 Ga0055526_1105169 3300003771 Bacteria 512
12 Ga0055537_1000627 3300003773 Bacteria 19128
13 Ga0055524_1000103 3300003775 Bacteria 105196
14 Ga0055534_1048987 3300003784 Bacteria 604
15 Ga0055528_1021230 3300003790 Bacteria 2069
16 Ga0055540_1013042 3300003792 Bacteria 2564
17 Ga0055540_1014121 3300003792 Bacteria 2399
18 Ga0055531_10006359 3300003794 Bacteria 6722
19 Ga0065165_1016090 3300005262 Bacteria 2817
20 Ga0065714_10143953 3300005288 Bacteria 1147
21 Ga0070658_10000067 3300005327 Bacteria 103026
22 Ga0070658_10132363 3300005327 Bacteria 2079
23 Ga0070658_11042388 3300005327 Bacteria 711
24 Ga0070658_11262264 3300005327 Bacteria 642
25 Ga0070676_10251645 3300005328 Bacteria 1179
26 Ga0070670_100003063 3300005331 Bacteria 13826
27 Ga0070670_100696752 3300005331 Bacteria 913
28 Ga0070677_10243468 3300005333 Bacteria 889
29 Ga0070668_100000245 3300005347 Bacteria 35846
30 Ga0070669_100042933 3300005353 Bacteria 3291
31 Ga0070669_100302907 3300005353 Bacteria 1286
32 Ga0070675_100753056 3300005354 Bacteria 889
33 Ga0070671_100002015 3300005355 Bacteria 15619
34 Ga0070671_100815180 3300005355 Bacteria 813
35 Ga0070667_100000101 3300005367 Bacteria 108015
36 Ga0070667_100482093 3300005367 Bacteria 1135
37 Ga0070678_100059017 3300005456 Bacteria 2818
38 Ga0070706_100941060 3300005467 Bacteria 797
39 Ga0068853_100674035 3300005539 Bacteria 985
40 Ga0070664_102309307 3300005564 Bacteria 510
41 Ga0068857_102452864 3300005577 Bacteria 512
42 Ga0068864_101419757 3300005618 Bacteria 696
43 Ga0068861_100215731 3300005719 Bacteria 1619
44 Ga0068863_100095996 3300005841 Bacteria 2814
45 Ga0068858_100001621 3300005842 Bacteria 22962
46 Ga0068858_100325738 3300005842 Bacteria 1469
47 Ga0068860_100001488 3300005843 Bacteria 25286
48 Ga0068862_100002718 3300005844 Bacteria 15522
49 Ga0068862_100008792 3300005844 Bacteria 8364
50 Ga0081539_10000326 3300005985 Bacteria 106248
51 Ga0075363_100520658 3300006048 Bacteria 707
52 Ga0075364_10006866 3300006051 Bacteria 6720
53 Ga0075364_10191221 3300006051 Bacteria 1386
54 Ga0075362_10007156 3300006177 Bacteria 4208
55 Ga0075367_10118966 3300006178 Bacteria 1627
56 Ga0075369_10102395 3300006186 Bacteria 1286
57 Ga0075366_10013196 3300006195 Bacteria 4699
58 Ga0075366_10041551 3300006195 Bacteria 2723
59 Ga0075370_10004213 3300006353 Bacteria 6947
60 Ga0075370_10188381 3300006353 Bacteria 1215
61 Ga0075370_10998342 3300006353 Bacteria 513
62 Ga0068871_102240473 3300006358 Bacteria 521
63 Ga0111539_11448547 3300009094 Bacteria 797
64 Ga0105243_10111984 3300009148 Bacteria 2285
65 Ga0105242_10543416 3300009176 Bacteria 1113
66 Ga0105248_10155554 3300009177 Bacteria 2580
67 Ga0105246_12203562 3300011119 Bacteria 536
68 Ga0157370_10858780 3300013104 Bacteria 824
69 Ga0157370_11015317 3300013104 Bacteria 751
70 Ga0163162_10349343 3300013306 Bacteria 1612
71 Ga0163162_10641215 3300013306 Bacteria 1186
72 Ga0157375_10545394 3300013308 Bacteria 1322
73 Ga0163163_13098876 3300014325 Bacteria 518
74 Ga0182008_10027760 3300014497 Bacteria 2864
75 Ga0182006_1076366 3300015261 Bacteria 1231
76 Ga0182006_1107519 3300015261 Bacteria 982
77 Ga0182007_10001181 3300015262 Bacteria 14184
78 Ga0182005_1046428 3300015265 Bacteria 1180
79 Ga0163161_10079026 3300017792 Bacteria 2418
80 Ga0163161_10343534 3300017792 Bacteria 1184
81 Ga0163161_11120016 3300017792 Bacteria 677
82 Ga0207425_1002520 3300025245 Bacteria 6407
83 Ga0207425_1021580 3300025245 Bacteria 1364
84 Ga0209129_1005823 3300025258 Bacteria 4201
85 Ga0209565_1000011 3300025263 Bacteria 637062
86 Ga0209673_1005913 3300025273 Bacteria 6045
87 Ga0209675_1041899 3300025291 Bacteria 996
88 Ga0209025_1000283 3300025294 Bacteria 114855
89 Ga0209025_1005915 3300025294 Bacteria 9755
90 Ga0209758_1021352 3300025297 Bacteria 3020
91 Ga0209050_1005135 3300025298 Bacteria 8398
92 Ga0209256_1000016 3300025299 Bacteria 599092
93 Ga0209051_1000124 3300025303 Bacteria 142998
94 Ga0209051_1003533 3300025303 Bacteria 10197
95 Ga0209257_1000317 3300025304 Bacteria 101723
96 Ga0209257_1001495 3300025304 Bacteria 27463
97 Ga0207647_10348575 3300025904 Bacteria 838
98 Ga0207645_10702548 3300025907 Bacteria 687
99 Ga0207705_11362871 3300025909 Bacteria 540
100 Ga0207684_10325001 3300025910 Bacteria 1326
101 Ga0207681_10013727 3300025923 Bacteria 5018
102 Ga0207681_10224359 3300025923 Bacteria 1455
103 Ga0207650_10014308 3300025925 Bacteria 5513
104 Ga0207650_11662696 3300025925 Bacteria 541
105 Ga0207644_10000082 3300025931 Bacteria 69981
106 Ga0207644_10669172 3300025931 Bacteria 865
107 Ga0207686_10242183 3300025934 Bacteria 1313
108 Ga0207709_10022275 3300025935 Bacteria 3593
109 Ga0207691_10944965 3300025940 Bacteria 721
110 Ga0207651_10918600 3300025960 Bacteria 780
111 Ga0207668_10000416 3300025972 Bacteria 26868
112 Ga0207658_10000077 3300025986 Bacteria 108352
113 Ga0207658_10154023 3300025986 Bacteria 1876
114 Ga0207703_10001299 3300026035 Bacteria 23105
115 Ga0207703_11016674 3300026035 Bacteria 795
116 Ga0207639_10694246 3300026041 Bacteria 944
117 Ga0207639_11515950 3300026041 Bacteria 629
118 Ga0207641_10000243 3300026088 Bacteria 70600
119 Ga0207683_10154833 3300026121 Bacteria 2070
120 Ga0207683_10851053 3300026121 Bacteria 847
121 Ga0268266_10825146 3300028379 Bacteria 896
122 Ga0268265_10000808 3300028380 Bacteria 29755
123 Ga0268265_10010777 3300028380 Bacteria 6172
124 Ga0268264_10000214 3300028381 Bacteria 114177
125 Ga0307515_10009674 3300028794 Bacteria 18595
126 Ga0307515_10021984 3300028794 Bacteria 11269
127 Ga0307512_10121694 3300030522 Bacteria 1673
128 Ga0316183_1089185 3300030742 Bacteria 906
129 Ga0316181_1063095 3300030744 Bacteria 1746
130 Ga0316182_1146649 3300030745 Bacteria 2210
131 Ga0265330_10161878 3300031235 Bacteria 950
132 Ga0265328_10280382 3300031239 Bacteria 641
133 Ga0265320_10326028 3300031240 Bacteria 679
134 Ga0265325_10329377 3300031241 Bacteria 677
135 Ga0265327_10034195 3300031251 Bacteria 2823
136 Ga0265316_10022353 3300031344 Bacteria 5333
137 Ga0307513_10107077 3300031456 Bacteria 2800
138 Ga0307509_10000836 3300031507 Bacteria 52853
139 Ga0307509_10309992 3300031507 Bacteria 1321
140 Ga0307408_100039672 3300031548 Bacteria 3330
141 Ga0307408_100049505 3300031548 Bacteria 3018
142 Ga0307408_100051541 3300031548 Bacteria 2964
143 Ga0307408_100428100 3300031548 Bacteria 1143
144 Ga0307408_100747904 3300031548 Bacteria 883
145 Ga0307508_10001793 3300031616 Bacteria 23843
146 Ga0265314_10038057 3300031711 Bacteria 3479
147 Ga0307405_10026072 3300031731 Bacteria 3367
148 Ga0307405_10301067 3300031731 Bacteria 1216
149 Ga0307405_10465799 3300031731 Bacteria 1005
150 Ga0307405_10589024 3300031731 Bacteria 906
151 Ga0307405_10612015 3300031731 Bacteria 890
152 Ga0307405_11691980 3300031731 Bacteria 560
153 Ga0307405_12064534 3300031731 Bacteria 511
154 Ga0307406_10001068 3300031901 Bacteria 15223
155 Ga0307406_10771122 3300031901 Bacteria 809
156 Ga0307412_10085336 3300031911 Bacteria 2194
157 Ga0307412_10121446 3300031911 Bacteria 1881
158 Ga0307412_10215772 3300031911 Bacteria 1467
159 Ga0307412_11062396 3300031911 Bacteria 718
160 Ga0307416_100690044 3300032002 Bacteria 1109
161 Ga0307414_10076225 3300032004 Bacteria 2437
162 Ga0307414_10251309 3300032004 Bacteria 1470
163 Ga0307414_10484425 3300032004 Bacteria 1091
164 Ga0307414_10721324 3300032004 Bacteria 904
165 Ga0307411_10632413 3300032005 Bacteria 924
166 Ga0307411_10760697 3300032005 Bacteria 849
167 Ga0307507_10093082 3300033179 Bacteria 2569
168 Ga0307510_10384130 3300033180 Bacteria 849
169 Ga0307510_10405051 3300033180 Bacteria 807
170 Ga0395905_0000532 3300037471 Bacteria 52229
171 Ga0395905_0128522 3300037471 Bacteria 2383
172 Ga0395905_0136219 3300037471 Bacteria 2310
173 Ga0395901_1794234 3300038443 Bacteria 563
174 Ga0439436_0044580 3300041404 Bacteria 1263
175 Ga0439436_0075879 3300041404 Bacteria 936
176 Ga0439438_091396 3300041405 Bacteria 741
177 Ga0439439_0006683 3300041406 Bacteria 2673
178 Ga0439447_009989 3300041407 Bacteria 2843
179 Ga0439461_0013049 3300041410 Bacteria 1563
180 Ga0439442_096294 3300042002 Bacteria 639
181 Ga0439445_0010738 3300042004 Bacteria 2173
182 Ga0439445_0014285 3300042004 Bacteria 1932
183 Ga0439432_052356 3300042006 Bacteria 1271
184 Ga0439449_0001326 3300042007 Bacteria 9680
185 Ga0439452_006030 3300042010 Bacteria 3837
186 Ga0439452_088816 3300042010 Bacteria 669
187 Ga0439457_016980 3300042014 Bacteria 1619
188 Ga0439462_0001215 3300042015 Bacteria 5638
189 Ga0439463_067716 3300042016 Bacteria 914
190 Ga0450911_000176 3300042115 Bacteria 25279
191 Ga0450912_021357 3300042116 Bacteria 628
192 Ga0450921_010813 3300042123 Bacteria 772
193 Ga0450923_012040 3300042125 Bacteria 1568
194 Ga0450891_007676 3300042129 Bacteria 989
195 Ga0450894_003419 3300042131 Bacteria 2075
196 Ga0450894_082277 3300042131 Bacteria 503
197 Ga0450909_027774 3300042185 Bacteria 854
198 Ga0439434_0021641 3300042435 Bacteria 1932
199 Ga0450893_0029531 3300042532 Bacteria 973
200 Ga0495627_082973 3300046453 Bacteria 927
201 Ga0495638_0029228 3300046460 Bacteria 3555
202 Ga0495653_0141216 3300046463 Bacteria 1694
203 Ga0495639_0055475 3300046475 Bacteria 1807
204 Ga0495610_0234292 3300046512 Bacteria 735
205 Ga0495618_0365244 3300046514 Bacteria 888
206 Ga0495620_0026488 3300046515 Bacteria 2726
207 Ga0495628_0531870 3300046516 Bacteria 846
208 Ga0495630_0492418 3300046517 Bacteria 940
209 Ga0495637_0047802 3300046520 Bacteria 1804
210 Ga0495648_0297262 3300046524 Bacteria 758
211 Ga0495648_0502183 3300046524 Bacteria 520
212 Ga0495642_0071556 3300046528 Bacteria 1451
213 Ga0495621_0127557 3300046539 Bacteria 988
214 Ga0495645_0223625 3300046543 Bacteria 1265
215 Ga0495656_0013220 3300046615 Bacteria 3065
216 Ga0495668_0209590 3300046616 Bacteria 1067
217 Ga0495625_0149758 3300046660 Bacteria 1569
218 Ga0495661_0063484 3300046665 Bacteria 2183
219 Ga0495588_0026220 3300046674 Bacteria 2908
220 Ga0495588_0028121 3300046674 Bacteria 2813
221 Ga0495599_0147544 3300046678 Bacteria 1458
222 Ga0495646_0665025 3300046680 Bacteria 526
223 Ga0495613_0305916 3300046689 Bacteria 1100
224 Ga0495624_0268065 3300046690 Bacteria 1032
225 Ga0495670_0155627 3300046691 Bacteria 1199
226 Ga0495670_0305227 3300046691 Bacteria 853
227 Ga0495671_0013215 3300046692 Bacteria 4481
228 Ga0495660_0156946 3300046810 Bacteria 1119
229 Ga0495660_0230871 3300046810 Bacteria 867
230 Ga0495602_0361877 3300048088 Bacteria 1044
231 Ga0495615_0137221 3300048090 Bacteria 719
232 Ga0496100_0771479 3300048903 Bacteria 752
233 Ga0496101_0937037 3300048904 Bacteria 681
234 Ga0496102_0018532 3300048905 Bacteria 6118
235 Ga0496104_0978039 3300048907 Bacteria 751
236 Ga0496105_0063759 3300048908 Bacteria 3040
237 Ga0496106_0474301 3300048909 Bacteria 1005
238 Ga0496107_0084285 3300048910 Bacteria 2319
239 Ga0496108_0027123 3300048911 Bacteria 4726
240 Ga0496109_0274262 3300048912 Bacteria 1589
241 Ga0496110_0039033 3300048913 Bacteria 4133
242 Ga0496114_0815346 3300048917 Bacteria 812
243 Ga0496117_0179317 3300048920 Bacteria 1220
244 Ga0496121_0003677 3300048924 Bacteria 21546
245 Ga0496122_0000331 3300048925 Bacteria 102617
246 Ga0496122_0242139 3300048925 Bacteria 1016
247 Ga0496122_0488450 3300048925 Bacteria 601
248 Ga0496123_0000124 3300048926 Bacteria 158327
249 Ga0496124_0026384 3300048927 Bacteria 5239
250 Ga0496124_0911233 3300048927 Bacteria 532
251 Ga0496125_0004727 3300048928 Bacteria 15518
252 Ga0496125_0004837 3300048928 Bacteria 15298
253 Ga0496125_0070103 3300048928 Bacteria 2746
254 Ga0501034_0053182 3300049571 Bacteria 4079
255 Ga0501047_0104916 3300049581 Bacteria 2707
256 Ga0501047_0145875 3300049581 Bacteria 2244
257 Ga0501223_000078 3300049663 Bacteria 29605
258 Ga0501224_000001 3300049664 Bacteria 308131
259 Ga0501233_039485 3300049668 Bacteria 1103
260 Ga0501235_034699 3300049669 Bacteria 1144
261 Ga0501225_0000179 3300049705 Bacteria 19590
262 Ga0501234_018490 3300049707 Bacteria 1103
263 Ga0501241_173335 3300049758 Bacteria 508
264 Ga0501226_000043 3300049853 Bacteria 58106
265 nmdc:mga03683_623_c1 3300050489 Bacteria 2256
266 nmdc:mga03n38_116278_c1 3300050490 Bacteria 1309
267 nmdc:mga00v17_32801_c1 3300050491 Bacteria 3072
268 nmdc:mga00v17_381816_c1 3300050491 Bacteria 916
269 nmdc:mga0k408_192869_c1 3300050493 Bacteria 1216
270 nmdc:mga0k408_690163_c1 3300050493 Bacteria 599
271 nmdc:mga0k408_7693_c1 3300050493 Bacteria 5759
272 nmdc:mga06z11_172827_c1 3300050494 Bacteria 1242
273 nmdc:mga07m45_127781_c1 3300050496 Bacteria 1470
274 nmdc:mga07m45_7515_c1 3300050496 Bacteria 5571
275 nmdc:mga08y16_836999_c1 3300050511 Bacteria 910
276 Ga0500610_0002860 3300053079 Bacteria 6485
277 Ga0500610_0076631 3300053079 Bacteria 1743
278 Ga0495595_0396395 3300053084 Bacteria 699
279 Ga0500646_0021275 3300053090 Bacteria 1727
280 Ga0500646_0117642 3300053090 Bacteria 851
281 Ga0500593_000439 3300053117 Bacteria 16369
282 Ga0500594_0012970 3300053118 Bacteria 1973
283 Ga0500607_001602 3300053121 Bacteria 20006
284 Ga0500608_017772 3300053122 Bacteria 3235
285 Ga0500618_031013 3300053125 Bacteria 1255
286 Ga0500618_031425 3300053125 Bacteria 1245
287 Ga0500559_0002067 3300053136 Bacteria 10736
288 Ga0500559_0037626 3300053136 Bacteria 2098
289 Ga0500568_0091758 3300053139 Bacteria 1145
290 Ga0500568_0119533 3300053139 Bacteria 982
291 Ga0500573_0156954 3300053140 Bacteria 1241
292 Ga0500616_0148451 3300053153 Bacteria 1088
293 Ga0500619_161724 3300053154 Bacteria 760
294 Ga0500622_0001031 3300053156 Bacteria 23303
295 Ga0500627_0001363 3300053158 Bacteria 6770
296 Ga0500634_0239248 3300053161 Bacteria 763
297 2643822533 2643221560 Bacteria 4801179
298 2842736460 2842733646 Bacteria 5716726
299 2929524073 2929520902 Bacteria 6765052
300 2954768370 2954767861 Bacteria 5535784
301 Ga0157375_10167302
302 ARcpr5yngRDRAFT_c005498
303 ARCol0yngRDRAFT_1003095
304 JGI24751J29686_10008675
305 JGI25150J39212_1043398
306 JGI25151J46595_10002707
307 JGI25153J46596_10010377
308 rootL2_10038463
309 rootH1_10019228
310 rootH1_10179193
311 Ga0055526_1105169
312 Ga0055537_1000627
313 Ga0055524_1000103
314 Ga0055534_1048987
315 Ga0055528_1021230
316 Ga0055540_1013042
317 Ga0055540_1014121
318 Ga0055531_10006359
319 Ga0065165_1016090
320 Ga0065714_10143953
321 Ga0070658_10000067
322 Ga0070658_10132363
323 Ga0070658_11042388
324 Ga0070658_11262264
325 Ga0070676_10251645
326 Ga0070670_100003063
327 Ga0070670_100696752
328 Ga0070677_10243468
329 Ga0070668_100000245
330 Ga0070669_100042933
331 Ga0070669_100302907
332 Ga0070675_100753056
333 Ga0070671_100002015
334 Ga0070671_100815180
335 Ga0070667_100000101
336 Ga0070667_100482093
337 Ga0070678_100059017
338 Ga0070706_100941060
339 Ga0068853_100674035
340 Ga0070664_102309307
341 Ga0068857_102452864
342 Ga0068864_101419757
343 Ga0068861_100215731
344 Ga0068863_100095996
345 Ga0068858_100001621
346 Ga0068858_100325738
347 Ga0068860_100001488
348 Ga0068862_100002718
349 Ga0068862_100008792
350 Ga0081539_10000326
351 Ga0075363_100520658
352 Ga0075364_10006866
353 Ga0075364_10191221
354 Ga0075362_10007156
355 Ga0075367_10118966
356 Ga0075369_10102395
357 Ga0075366_10013196
358 Ga0075366_10041551
359 Ga0075370_10004213
360 Ga0075370_10188381
361 Ga0075370_10998342
362 Ga0068871_102240473
363 Ga0111539_11448547
364 Ga0105243_10111984
365 Ga0105242_10543416
366 Ga0105248_10155554
367 Ga0105246_12203562
368 Ga0157370_10858780
369 Ga0157370_11015317
370 Ga0163162_10349343
371 Ga0163162_10641215
372 Ga0157375_10545394
373 Ga0163163_13098876
374 Ga0182008_10027760
375 Ga0182006_1076366
376 Ga0182006_1107519
377 Ga0182007_10001181
378 Ga0182005_1046428
379 Ga0163161_10079026
380 Ga0163161_10343534
381 Ga0163161_11120016
382 Ga0207425_1002520
383 Ga0207425_1021580
384 Ga0209129_1005823
385 Ga0209565_1000011
386 Ga0209673_1005913
387 Ga0209675_1041899
388 Ga0209025_1000283
389 Ga0209025_1005915
390 Ga0209758_1021352
391 Ga0209050_1005135
392 Ga0209256_1000016
393 Ga0209051_1000124
394 Ga0209051_1003533
395 Ga0209257_1000317
396 Ga0209257_1001495
397 Ga0207647_10348575
398 Ga0207645_10702548
399 Ga0207705_11362871
400 Ga0207684_10325001
401 Ga0207681_10013727
402 Ga0207681_10224359
403 Ga0207650_10014308
404 Ga0207650_11662696
405 Ga0207644_10000082
406 Ga0207644_10669172
407 Ga0207686_10242183
408 Ga0207709_10022275
409 Ga0207691_10944965
410 Ga0207651_10918600
411 Ga0207668_10000416
412 Ga0207658_10000077
413 Ga0207658_10154023
414 Ga0207703_10001299
415 Ga0207703_11016674
416 Ga0207639_10694246
417 Ga0207639_11515950
418 Ga0207641_10000243
419 Ga0207683_10154833
420 Ga0207683_10851053
421 Ga0268266_10825146
422 Ga0268265_10000808
423 Ga0268265_10010777
424 Ga0268264_10000214
425 Ga0307515_10009674
426 Ga0307515_10021984
427 Ga0307512_10121694
428 Ga0316183_1089185
429 Ga0316181_1063095
430 Ga0316182_1146649
431 Ga0265330_10161878
432 Ga0265328_10280382
433 Ga0265320_10326028
434 Ga0265325_10329377
435 Ga0265327_10034195
436 Ga0265316_10022353
437 Ga0307513_10107077
438 Ga0307509_10000836
439 Ga0307509_10309992
440 Ga0307408_100039672
441 Ga0307408_100049505
442 Ga0307408_100051541
443 Ga0307408_100428100
444 Ga0307408_100747904
445 Ga0307508_10001793
446 Ga0265314_10038057
447 Ga0307405_10026072
448 Ga0307405_10301067
449 Ga0307405_10465799
450 Ga0307405_10589024
451 Ga0307405_10612015
452 Ga0307405_11691980
453 Ga0307405_12064534
454 Ga0307406_10001068
455 Ga0307406_10771122
456 Ga0307412_10085336
457 Ga0307412_10121446
458 Ga0307412_10215772
459 Ga0307412_11062396
460 Ga0307416_100690044
461 Ga0307414_10076225
462 Ga0307414_10251309
463 Ga0307414_10484425
464 Ga0307414_10721324
465 Ga0307411_10632413
466 Ga0307411_10760697
467 Ga0307507_10093082
468 Ga0307510_10384130
469 Ga0307510_10405051
470 Ga0395905_0000532
471 Ga0395905_0128522
472 Ga0395905_0136219
473 Ga0395901_1794234
474 Ga0439436_0044580
475 Ga0439436_0075879
476 Ga0439438_091396
477 Ga0439439_0006683
478 Ga0439447_009989
479 Ga0439461_0013049
480 Ga0439442_096294
481 Ga0439445_0010738
482 Ga0439445_0014285
483 Ga0439432_052356
484 Ga0439449_0001326
485 Ga0439452_006030
486 Ga0439452_088816
487 Ga0439457_016980
488 Ga0439462_0001215
489 Ga0439463_067716
490 Ga0450911_000176
491 Ga0450912_021357
492 Ga0450921_010813
493 Ga0450923_012040
494 Ga0450891_007676
495 Ga0450894_003419
496 Ga0450894_082277
497 Ga0450909_027774
498 Ga0439434_0021641
499 Ga0450893_0029531
500 Ga0495627_082973
501 Ga0495638_0029228
502 Ga0495653_0141216
503 Ga0495639_0055475
504 Ga0495610_0234292
505 Ga0495618_0365244
506 Ga0495620_0026488
507 Ga0495628_0531870
508 Ga0495630_0492418
509 Ga0495637_0047802
510 Ga0495648_0297262
511 Ga0495648_0502183
512 Ga0495642_0071556
513 Ga0495621_0127557
514 Ga0495645_0223625
515 Ga0495656_0013220
516 Ga0495668_0209590
517 Ga0495625_0149758
518 Ga0495661_0063484
519 Ga0495588_0026220
520 Ga0495588_0028121
521 Ga0495599_0147544
522 Ga0495646_0665025
523 Ga0495613_0305916
524 Ga0495624_0268065
525 Ga0495670_0155627
526 Ga0495670_0305227
527 Ga0495671_0013215
528 Ga0495660_0156946
529 Ga0495660_0230871
530 Ga0495602_0361877
531 Ga0495615_0137221
532 Ga0496100_0771479
533 Ga0496101_0937037
534 Ga0496102_0018532
535 Ga0496104_0978039
536 Ga0496105_0063759
537 Ga0496106_0474301
538 Ga0496107_0084285
539 Ga0496108_0027123
540 Ga0496109_0274262
541 Ga0496110_0039033
542 Ga0496114_0815346
543 Ga0496117_0179317
544 Ga0496121_0003677
545 Ga0496122_0000331
546 Ga0496122_0242139
547 Ga0496122_0488450
548 Ga0496123_0000124
549 Ga0496124_0026384
550 Ga0496124_0911233
551 Ga0496125_0004727
552 Ga0496125_0004837
553 Ga0496125_0070103
554 Ga0501034_0053182
555 Ga0501047_0104916
556 Ga0501047_0145875
557 Ga0501223_000078
558 Ga0501224_000001
559 Ga0501233_039485
560 Ga0501235_034699
561 Ga0501225_0000179
562 Ga0501234_018490
563 Ga0501241_173335
564 Ga0501226_000043
565 nmdc:mga03683_623_c1
566 nmdc:mga03n38_116278_c1
567 nmdc:mga00v17_32801_c1
568 nmdc:mga00v17_381816_c1
569 nmdc:mga0k408_192869_c1
570 nmdc:mga0k408_690163_c1
571 nmdc:mga0k408_7693_c1
572 nmdc:mga06z11_172827_c1
573 nmdc:mga07m45_127781_c1
574 nmdc:mga07m45_7515_c1
575 nmdc:mga08y16_836999_c1
576 Ga0500610_0002860
577 Ga0500610_0076631
578 Ga0495595_0396395
579 Ga0500646_0021275
580 Ga0500646_0117642
581 Ga0500593_000439
582 Ga0500594_0012970
583 Ga0500607_001602
584 Ga0500608_017772
585 Ga0500618_031013
586 Ga0500618_031425
587 Ga0500559_0002067
588 Ga0500559_0037626
589 Ga0500568_0091758
590 Ga0500568_0119533
591 Ga0500573_0156954
592 Ga0500616_0148451
593 Ga0500619_161724
594 Ga0500622_0001031
595 Ga0500627_0001363
596 Ga0500634_0239248
597 2643822533
598 2842736460
599 2929524073
600 2954768370

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00111

Fer2

2Fe-2S iron-sulfur cluster binding domain

7

92

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lxf-assembly1.cif.gz_A crystal structure of [2fe-2s] ferredoxin arx from novosphingobium aromaticivorans 0.9874 3 105
3lxf-assembly1.cif.gz_A crystal structure of [2fe-2s] ferredoxin arx from novosphingobium aromaticivorans 0.9688 3 105
2y5c-assembly2.cif.gz_B structure of human ferredoxin 2 (fdx2)in complex with 2fe2s cluster 0.9631 2 100
4ltu-assembly2.cif.gz_B crystal structure of ferredoxin from rhodopseudomonas palustris haa2 0.9575 2 101
6ywe-assembly1.cif.gz_V the structure of the mitoribosome from neurospora crassa in the p/e trna bound state 0.9564 3 16
ID Description Score Start End Superfamily
3lxfB00 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.989 3 105 3.10.20.30
af_Q9CPW2_55_168_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.9753 2 100 3.10.20.30
3lxfB00 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.9703 3 105 3.10.20.30
af_A4I756_34_144_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.964 2 100 3.10.20.30
4ltuB00 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.9575 2 101 3.10.20.30
ID Description Score Start End GO Terms
AF-X5CWH9-F1-model_v4 Chloroacetanilide N-alkylformylase 2, ferredoxin component (Ferredoxin CndB2) 0.9926 1 105 GO:0009055
GO:0046872
GO:0051537
GO:0140647
AF-A0A0H0XV86-F1-model_v4 Ferredoxin 0.9922 1 105 GO:0009055
GO:0051537
GO:0140647
AF-A0A419TFV9-F1-model_v4 deleted 0.9914 2 105
AF-Q2G8A3-F1-model_v4 Ferredoxin 0.9909 2 105 GO:0009055
GO:0046872
GO:0051537
GO:0140647
AF-J2VL54-F1-model_v4 Ferredoxin 0.9908 1 105 GO:0005829
GO:0009055
GO:0051537
GO:0140647

Map