F393987

General Info

Members Datasets Scaffolds Average Seq Length
297 261 594 196

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2935984226|2935989500
Length 237
Sequence ILSSQPRSISMRCRHLYNKYTGVCCCQPVNMFYWCSNSPGIPMSKESRKFQVPDALANIYDFANTLDVRHFSHFGVEHPQSDELAGMKQLADWMQERGLGGGRITPAMFATALRLREALRAYLQCEPAERRRNKEVLGALGDALAAFPLRVEARVGCGAVLSAIRDDALAGLSAIAIELHNATLVGTLDRLKMCASEECRRVFFDRSKPSTRRWCMSTLCGNRMKTRAYRERQREAK

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
8 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
11 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
12 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
16 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
19 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
24 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
28 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
29 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
30 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
31 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
33 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
35 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
54 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
57 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
58 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
59 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
60 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
61 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
62 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
63 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
64 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
65 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
66 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
67 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
68 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
69 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
70 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
71 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
72 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
73 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
80 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
81 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
82 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
83 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
86 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
87 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
88 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
89 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
90 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
91 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
92 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
93 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
94 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
95 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
96 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
97 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
98 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
99 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
103 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
106 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
107 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
110 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
111 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
112 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
113 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
114 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
115 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
116 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
117 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
118 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
119 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
120 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
121 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
122 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
123 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
124 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
125 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
126 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
127 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
128 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
129 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
130 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
131 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
132 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
133 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
134 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
135 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
141 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
142 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
143 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
144 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
145 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
146 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
151 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
153 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
154 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
155 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
156 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
157 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
158 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
159 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
160 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
161 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
162 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
163 2935984226 Bradyrhizobium sp. i1.15.2 Isolate Nodule
164 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
165 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
166 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
167 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
168 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
169 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
170 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
171 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
172 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
173 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
174 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
175 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
176 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
177 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
178 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
179 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
180 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
181 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
182 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
183 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
184 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
185 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
186 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
187 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
188 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
189 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
190 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
191 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
192 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
193 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
194 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
195 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
196 2922368715
197 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
198 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
199 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
200 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
201 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
202 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
203 2935616580 Bradyrhizobium sp. RT7a Isolate Nodule
204 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
205 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
206 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
207 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
208 2935675223 Bradyrhizobium sp. LA2.1 Isolate Nodule
209 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
210 2935694250 Bradyrhizobium sp. LA6.1 Isolate Nodule
211 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
212 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
213 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
214 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
215 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
216 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
217 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
218 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
219 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
220 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
221 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
222 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
223 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
224 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
225 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
226 2935855204 Bradyrhizobium sp. RT7b Isolate Nodule
227 2935864058 Bradyrhizobium sp. RT9a Isolate Nodule
228 2935873716 Bradyrhizobium sp. RT9b Isolate Nodule
229 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
230 2936002035 Bradyrhizobium sp. I1.8.5 Isolate Nodule
231 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
232 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
233 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
234 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
235 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
236 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
237 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
238 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
239 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
240 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
241 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
242 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
243 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
244 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
245 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
246 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
247 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
248 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule
249 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
250 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
251 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
252 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
253 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
254 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
255 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
256 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule
257 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
258 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
259 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
260 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
261 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 66.89
Metatranscriptomes 0
Isolates 33.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.72
Nodule 28.28
Rhizoplane 2.02
Rhizosphere 48.48
Stem 0
Stem Tuber 0
Unclassified 0.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10063411 3300003323 Bacteria 3311
2 Ga0055529_1008177 3300003763 Bacteria 1398
3 Ga0070658_10315291 3300005327 Bacteria 1335
4 Ga0070709_10010403 3300005434 Bacteria 5153
5 Ga0070713_100210569 3300005436 Bacteria 1760
6 Ga0070698_100114087 3300005471 Bacteria 2667
7 Ga0070693_100577582 3300005547 Bacteria 808
8 Ga0068854_100046703 3300005578 Bacteria 3084
9 Ga0068856_100004583 3300005614 Bacteria 13742
10 Ga0068852_100536380 3300005616 Bacteria 1169
11 Ga0068858_100595765 3300005842 Bacteria 1072
12 Ga0081540_1000311 3300005983 Bacteria 50309
13 Ga0081540_1001661 3300005983 Bacteria 18926
14 Ga0070717_10735734 3300006028 Bacteria 897
15 Ga0075363_100045813 3300006048 Bacteria 2320
16 Ga0070715_10265044 3300006163 Bacteria 904
17 Ga0070716_100099982 3300006173 Bacteria 1776
18 Ga0070712_100123881 3300006175 Bacteria 1949
19 Ga0075367_10128638 3300006178 Bacteria 1564
20 Ga0075366_10275789 3300006195 Bacteria 1027
21 Ga0097621_100658730 3300006237 Bacteria 961
22 Ga0075370_10316201 3300006353 Bacteria 930
23 Ga0075435_100969338 3300007076 Bacteria 742
24 Ga0099794_10080694 3300007265 Bacteria 1604
25 Ga0099794_10098144 3300007265 Bacteria 1460
26 Ga0099794_10104948 3300007265 Bacteria 1412
27 Ga0099795_10011753 3300007788 Bacteria 2630
28 Ga0099795_10077217 3300007788 Bacteria 1268
29 Ga0105243_11015573 3300009148 Bacteria 833
30 Ga0105248_10285075 3300009177 Bacteria 1860
31 Ga0099796_10178686 3300010159 Bacteria 851
32 Ga0157376_10163416 3300014969 Bacteria 2020
33 Ga0213872_10045354 3300021361 Bacteria 2000
34 Ga0213872_10139634 3300021361 Bacteria 1064
35 Ga0213876_10002904 3300021384 Bacteria 9937
36 Ga0209677_101397 3300025253 Bacteria 10481
37 Ga0209233_1017201 3300025261 Bacteria 1974
38 Ga0209455_1007009 3300025272 Bacteria 3244
39 Ga0207426_1038415 3300025302 Bacteria 1508
40 Ga0207697_10088439 3300025315 Bacteria 1311
41 Ga0207692_10062118 3300025898 Bacteria 1938
42 Ga0207699_10015796 3300025906 Bacteria 3932
43 Ga0207693_10129656 3300025915 Bacteria 1982
44 Ga0207693_10438086 3300025915 Bacteria 1022
45 Ga0207663_10313431 3300025916 Bacteria 1176
46 Ga0207687_10012982 3300025927 Bacteria 5442
47 Ga0207700_10074395 3300025928 Bacteria 2628
48 Ga0207665_10119230 3300025939 Bacteria 1862
49 Ga0207679_10147480 3300025945 Bacteria 1910
50 Ga0207668_10072880 3300025972 Bacteria 2459
51 Ga0207640_10034305 3300025981 Bacteria 3166
52 Ga0207658_10219214 3300025986 Bacteria 1600
53 Ga0207639_10359564 3300026041 Bacteria 1302
54 Ga0207702_10000075 3300026078 Bacteria 112303
55 Ga0207648_10093919 3300026089 Bacteria 2623
56 Ga0207676_10763040 3300026095 Bacteria 941
57 Ga0207698_10521906 3300026142 Bacteria 1159
58 Ga0209588_1000664 3300027671 Bacteria 8637
59 Ga0307517_10000111 3300028786 Bacteria 120304
60 Ga0307515_10037222 3300028794 Bacteria 7833
61 Ga0307515_10128641 3300028794 Bacteria 2807
62 Ga0307513_10245189 3300031456 Bacteria 1593
63 Ga0307509_10154654 3300031507 Bacteria 2202
64 Ga0307508_10162756 3300031616 Bacteria 1835
65 Ga0307510_10138909 3300033180 Bacteria 2079
66 Ga0373934_0002183 3300035086 Bacteria 7188
67 Ga0373923_0041583 3300035111 Bacteria 1895
68 Ga0373923_0048976 3300035111 Bacteria 1766
69 Ga0373936_0028109 3300035113 Bacteria 2209
70 Ga0373945_0051404 3300035116 Bacteria 1516
71 Ga0373953_0000871 3300035117 Bacteria 8465
72 Ga0373956_0003524 3300035119 Bacteria 6303
73 Ga0373957_0027190 3300035120 Bacteria 2076
74 Ga0373943_0112715 3300035170 Bacteria 1436
75 Ga0373946_0023425 3300035171 Bacteria 2412
76 Ga0373955_0002774 3300035172 Bacteria 7685
77 Ga0373924_0013699 3300035410 Bacteria 3051
78 Ga0373935_0000110 3300035692 Bacteria 37393
79 Ga0373927_0002008 3300035695 Bacteria 14993
80 Ga0373933_0000863 3300035724 Bacteria 18584
81 Ga0373947_0000174 3300035725 Bacteria 35061
82 Ga0373937_0056442 3300036401 Bacteria 3606
83 Ga0373937_0488451 3300036401 Bacteria 1170
84 Ga0373925_0000748 3300037068 Bacteria 29849
85 Ga0395898_0196308 3300037466 Bacteria 1927
86 Ga0395901_0124721 3300038443 Bacteria 2706
87 Ga0436365_1671609 3300039437 Bacteria 3164
88 Ga0436360_0027222 3300039438 Bacteria 5454
89 Ga0436361_0544419 3300039447 Bacteria 4318
90 Ga0436361_0582504 3300039447 Unclassified 830
91 Ga0436361_1138424 3300039447 Bacteria 3569
92 Ga0436363_0113437 3300039450 Bacteria 1571
93 Ga0436363_0768726 3300039450 Bacteria 1395
94 Ga0436363_1084092 3300039450 Bacteria 966
95 Ga0436362_0876134 3300039453 Bacteria 1927
96 Ga0451853_1569181 3300041512 Bacteria 978
97 Ga0466966_0117965 3300044684 Bacteria 1632
98 Ga0466968_0249486 3300044735 Bacteria 843
99 Ga0466970_0074382 3300044765 Bacteria 1829
100 Ga0495617_048966 3300046452 Bacteria 1407
101 Ga0495592_0005433 3300046454 Bacteria 9405
102 Ga0495592_0093816 3300046454 Bacteria 2149
103 Ga0495603_0000011 3300046455 Bacteria 69832
104 Ga0495629_0000251 3300046459 Bacteria 46643
105 Ga0495629_0279613 3300046459 Bacteria 1145
106 Ga0495641_0011534 3300046461 Bacteria 5024
107 Ga0495651_0080027 3300046462 Bacteria 2468
108 Ga0495653_0000473 3300046463 Bacteria 31165
109 Ga0495580_0000174 3300046472 Bacteria 47868
110 Ga0495582_0000974 3300046473 Bacteria 16016
111 Ga0495639_0000017 3300046475 Bacteria 76508
112 Ga0495662_0000179 3300046476 Bacteria 25483
113 Ga0495664_0021327 3300046477 Bacteria 3742
114 Ga0495594_0000094 3300046499 Bacteria 41090
115 Ga0495608_0005415 3300046511 Bacteria 9127
116 Ga0495628_0025821 3300046516 Bacteria 4797
117 Ga0495628_0073125 3300046516 Bacteria 2671
118 Ga0495630_0011407 3300046517 Bacteria 6437
119 Ga0495666_0243589 3300046526 Bacteria 820
120 Ga0495652_0049393 3300046529 Bacteria 3602
121 Ga0495652_0454919 3300046529 Bacteria 895
122 Ga0495665_0000032 3300046531 Bacteria 53670
123 Ga0495640_0001724 3300046533 Bacteria 17333
124 Ga0495640_0003404 3300046533 Bacteria 12801
125 Ga0495587_0018471 3300046536 Bacteria 4324
126 Ga0495645_0009038 3300046543 Bacteria 6959
127 Ga0495622_0071966 3300046557 Bacteria 1595
128 Ga0495622_0204614 3300046557 Bacteria 878
129 Ga0495667_0000962 3300046559 Bacteria 18643
130 Ga0495667_0072190 3300046559 Bacteria 2250
131 Ga0495634_0011067 3300046642 Bacteria 6583
132 Ga0495634_0141948 3300046642 Bacteria 1524
133 Ga0495635_0004380 3300046663 Bacteria 9777
134 Ga0495635_0006016 3300046663 Bacteria 8462
135 Ga0495588_0013382 3300046674 Bacteria 3910
136 Ga0495657_0005422 3300046675 Bacteria 10097
137 Ga0495599_0000457 3300046678 Bacteria 23252
138 Ga0495623_0007156 3300046679 Bacteria 7244
139 Ga0495646_0005193 3300046680 Bacteria 8213
140 Ga0495646_0050380 3300046680 Bacteria 2524
141 Ga0495647_0000073 3300046681 Bacteria 24384
142 Ga0495658_0000921 3300046683 Bacteria 15691
143 Ga0495613_0001580 3300046689 Bacteria 17285
144 Ga0495613_0078566 3300046689 Bacteria 2400
145 Ga0495624_0008573 3300046690 Bacteria 7120
146 Ga0495600_0016646 3300046809 Bacteria 4671
147 Ga0495581_0000076 3300047315 Bacteria 39131
148 Ga0495604_0024441 3300047317 Bacteria 4820
149 Ga0495604_0255103 3300047317 Bacteria 1194
150 Ga0495674_0001109 3300047319 Bacteria 25876
151 Ga0495674_0033114 3300047319 Bacteria 4683
152 Ga0495676_0018936 3300047321 Bacteria 6064
153 Ga0495680_0012342 3300047322 Bacteria 7521
154 Ga0495680_0179100 3300047322 Bacteria 1531
155 Ga0495675_0001533 3300047444 Bacteria 13942
156 Ga0495684_0001330 3300047471 Bacteria 19879
157 Ga0495686_0330200 3300047472 Bacteria 834
158 Ga0495593_0002160 3300047673 Bacteria 11757
159 Ga0495593_0017975 3300047673 Bacteria 3977
160 Ga0495602_0015205 3300048088 Bacteria 7777
161 Ga0495614_0045284 3300048089 Bacteria 1887
162 Ga0496100_0309336 3300048903 Bacteria 1184
163 Ga0496101_0086113 3300048904 Bacteria 2330
164 Ga0496104_0068537 3300048907 Bacteria 3371
165 Ga0496107_0141000 3300048910 Bacteria 1781
166 Ga0496112_0149125 3300048915 Bacteria 2306
167 Ga0496115_0059453 3300048918 Bacteria 3078
168 Ga0496116_0158376 3300048919 Bacteria 1246
169 Ga0496116_0330058 3300048919 Unclassified 709
170 Ga0496117_0156130 3300048920 Bacteria 1343
171 Ga0496118_0018669 3300048921 Bacteria 6235
172 Ga0496118_0067617 3300048921 Bacteria 2600
173 Ga0496119_0270106 3300048922 Bacteria 850
174 Ga0496120_0155520 3300048923 Bacteria 1145
175 Ga0496121_0023068 3300048924 Bacteria 6011
176 Ga0496121_0189024 3300048924 Bacteria 1478
177 Ga0496121_0309326 3300048924 Bacteria 1069
178 Ga0496123_0328558 3300048926 Bacteria 719
179 Ga0496124_0032658 3300048927 Bacteria 4592
180 Ga0496125_0018377 3300048928 Bacteria 6643
181 Ga0496125_0169378 3300048928 Bacteria 1471
182 Ga0496126_0013085 3300048929 Bacteria 8465
183 Ga0496126_0076496 3300048929 Bacteria 2969
184 Ga0496126_0116079 3300048929 Bacteria 2327
185 Ga0495682_0137222 3300049460 Bacteria 874
186 Ga0501032_0246331 3300049569 Bacteria 1160
187 Ga0501067_0263684 3300049583 Bacteria 959
188 nmdc:mga03n38_19179_c1 3300050490 Bacteria 2713
189 nmdc:mga0yw44_603353_c1 3300050492 Bacteria 746
190 nmdc:mga06z11_318177_c1 3300050494 Bacteria 928
191 nmdc:mga07m45_431765_c1 3300050496 Bacteria 764
192 nmdc:mga0sz30_216394_c1 3300050516 Bacteria 851
193 nmdc:mga0sz30_63687_c1 3300050516 Bacteria 1578
194 Ga0495601_0004713 3300053077 Bacteria 7904
195 Ga0495595_0015843 3300053084 Bacteria 3219
196 Ga0495619_0004881 3300053085 Bacteria 8515
197 Ga0500595_000589 3300053119 Bacteria 21663
198 Ga0500637_0004258 3300053178 Bacteria 6760
199 2935989500 2935984226 Bacteria 8302647
200 2508690939 2508501042 Bacteria 8719808
201 2509147406 2508501128 Bacteria 8613869
202 2513691932 2513237101 Bacteria 7952346
203 2513876586 2513237139 Bacteria 8737671
204 2513892801 2513237141 Bacteria 8496279
205 2514010922 2513237161 Bacteria 8871253
206 2524436680 2524023205 Bacteria 8918781
207 2528852252 2528768022 Bacteria 10457665
208 2617352850 2617270735 Bacteria 9163226
209 2723845674 2721755755 Bacteria 8322773
210 2745079251 2744054633 Bacteria 8678936
211 2805919841 2802429603 Bacteria 8777136
212 2824667770 2824661429 Bacteria 9877870
213 2824676149 2824671348 Bacteria 8369588
214 2824691834 2824687955 Bacteria 8360029
215 2824699437 2824696289 Bacteria 8335049
216 2824710703 2824704595 Bacteria 9667483
217 2824761124 2824753945 Bacteria 9787441
218 2824771186 2824763712 Bacteria 9792355
219 2824779340 2824773399 Bacteria 8360218
220 2838126417 2838122688 Bacteria 8803140
221 2841943509 2841941048 Bacteria 8688029
222 2841950544 2841949485 Bacteria 8680857
223 2841966857 2841966195 Bacteria 8673214
224 2841975608 2841974524 Bacteria 8931498
225 2841988185 2841983080 Bacteria 8395090
226 2847945968 2847939898 Bacteria 8606328
227 2874609705 2874604998 Bacteria 7834745
228 2879108052 2879099564 Bacteria 10442239
229 2885415970 2885409591 Bacteria 9235467
230 2904717266 2904711408 Bacteria 9771557
231 2906632446 2906626472 Bacteria 8826946
232 2922373614
233 2929617348 2929615660 Bacteria 9193770
234 2929627053 2929624759 Bacteria 9339455
235 2932787616 2932784394 Bacteria 9704911
236 2932820882 2932818245 Bacteria 9955613
237 2932834752 2932828146 Bacteria 9745859
238 2933579305 2933577622 Bacteria 9116884
239 2935621710 2935616580 Bacteria 9032984
240 2935642660 2935638405 Bacteria 10015038
241 2935655095 2935648319 Bacteria 8801166
242 2935663973 2935656913 Bacteria 8965014
243 2935667762 2935665750 Bacteria 9571747
244 2935682252 2935675223 Bacteria 9928132
245 2935688508 2935684952 Bacteria 9590419
246 2935695857 2935694250 Bacteria 9291695
247 2935706602 2935703347 Bacteria 10242284
248 2935715527 2935713505 Bacteria 9608509
249 2935725909 2935722832 Bacteria 9608746
250 2935734346 2935732158 Bacteria 9706831
251 2935743725 2935741537 Bacteria 9707219
252 2935754238 2935750917 Bacteria 9590372
253 2935768401 2935760218 Bacteria 9817913
254 2935772652 2935769743 Bacteria 7878163
255 2935783202 2935777560 Bacteria 8077691
256 2935790945 2935785616 Bacteria 7962367
257 2935799354 2935793552 Bacteria 8012592
258 2935806431 2935801545 Bacteria 9301974
259 2935813023 2935810662 Bacteria 9401221
260 2935830675 2935827899 Bacteria 10038562
261 2935840704 2935837841 Bacteria 9454360
262 2935859957 2935855204 Bacteria 9035059
263 2935869408 2935864058 Bacteria 9784707
264 2935880431 2935873716 Bacteria 9632195
265 2935999486 2935992306 Bacteria 9802711
266 2936006532 2936002035 Bacteria 9362176
267 2936018129 2936011229 Bacteria 8801034
268 2936026632 2936019824 Bacteria 8804134
269 2936035375 2936028420 Bacteria 8965941
270 2936041611 2936037263 Bacteria 9446081
271 2936053524 2936046547 Bacteria 8903709
272 2936057056 2936055302 Bacteria 8785755
273 2940560386 2940556831 Bacteria 9590747
274 2941541166 2941538514 Bacteria 9402094
275 8006990195 8006984368 Bacteria 9651211
276 8016514070 8016511872 Bacteria 9921665
277 8016530254 8016522445 Bacteria 8156687
278 8016535514 8016530956 Bacteria 8155261
279 8016548709 8016539877 Bacteria 8155419
280 8016553425 8016548790 Bacteria 8155074
281 8016561802 8016557553 Bacteria 8154380
282 8016573845 8016566248 Bacteria 8158151
283 8016577970 8016575299 Bacteria 8154085
284 8016592628 8016583857 Bacteria 10421953
285 8016599637 8016595262 Bacteria 8149947
286 8016611285 8016603502 Bacteria 8731218
287 8016627361 8016622563 Bacteria 7999408
288 8016631663 8016630954 Bacteria 9217207
289 8017062342 8017057580 Bacteria 10023680
290 8019535246 8019530166 Bacteria 8155624
291 8019544236 8019538911 Bacteria 7872763
292 8019554465 8019547302 Bacteria 7996444
293 8019581796 8019576017 Bacteria 10049540
294 8019589469 8019586578 Bacteria 10212056
295 8019601796 8019597564 Bacteria 10041141
296 8019616756 8019608314 Bacteria 10042931
297 8055747037 8055742211 Bacteria 9226248
298 rootH1_10063411
299 Ga0055529_1008177
300 Ga0070658_10315291
301 Ga0070709_10010403
302 Ga0070713_100210569
303 Ga0070698_100114087
304 Ga0070693_100577582
305 Ga0068854_100046703
306 Ga0068856_100004583
307 Ga0068852_100536380
308 Ga0068858_100595765
309 Ga0081540_1000311
310 Ga0081540_1001661
311 Ga0070717_10735734
312 Ga0075363_100045813
313 Ga0070715_10265044
314 Ga0070716_100099982
315 Ga0070712_100123881
316 Ga0075367_10128638
317 Ga0075366_10275789
318 Ga0097621_100658730
319 Ga0075370_10316201
320 Ga0075435_100969338
321 Ga0099794_10080694
322 Ga0099794_10098144
323 Ga0099794_10104948
324 Ga0099795_10011753
325 Ga0099795_10077217
326 Ga0105243_11015573
327 Ga0105248_10285075
328 Ga0099796_10178686
329 Ga0157376_10163416
330 Ga0213872_10045354
331 Ga0213872_10139634
332 Ga0213876_10002904
333 Ga0209677_101397
334 Ga0209233_1017201
335 Ga0209455_1007009
336 Ga0207426_1038415
337 Ga0207697_10088439
338 Ga0207692_10062118
339 Ga0207699_10015796
340 Ga0207693_10129656
341 Ga0207693_10438086
342 Ga0207663_10313431
343 Ga0207687_10012982
344 Ga0207700_10074395
345 Ga0207665_10119230
346 Ga0207679_10147480
347 Ga0207668_10072880
348 Ga0207640_10034305
349 Ga0207658_10219214
350 Ga0207639_10359564
351 Ga0207702_10000075
352 Ga0207648_10093919
353 Ga0207676_10763040
354 Ga0207698_10521906
355 Ga0209588_1000664
356 Ga0307517_10000111
357 Ga0307515_10037222
358 Ga0307515_10128641
359 Ga0307513_10245189
360 Ga0307509_10154654
361 Ga0307508_10162756
362 Ga0307510_10138909
363 Ga0373934_0002183
364 Ga0373923_0041583
365 Ga0373923_0048976
366 Ga0373936_0028109
367 Ga0373945_0051404
368 Ga0373953_0000871
369 Ga0373956_0003524
370 Ga0373957_0027190
371 Ga0373943_0112715
372 Ga0373946_0023425
373 Ga0373955_0002774
374 Ga0373924_0013699
375 Ga0373935_0000110
376 Ga0373927_0002008
377 Ga0373933_0000863
378 Ga0373947_0000174
379 Ga0373937_0056442
380 Ga0373937_0488451
381 Ga0373925_0000748
382 Ga0395898_0196308
383 Ga0395901_0124721
384 Ga0436365_1671609
385 Ga0436360_0027222
386 Ga0436361_0544419
387 Ga0436361_0582504
388 Ga0436361_1138424
389 Ga0436363_0113437
390 Ga0436363_0768726
391 Ga0436363_1084092
392 Ga0436362_0876134
393 Ga0451853_1569181
394 Ga0466966_0117965
395 Ga0466968_0249486
396 Ga0466970_0074382
397 Ga0495617_048966
398 Ga0495592_0005433
399 Ga0495592_0093816
400 Ga0495603_0000011
401 Ga0495629_0000251
402 Ga0495629_0279613
403 Ga0495641_0011534
404 Ga0495651_0080027
405 Ga0495653_0000473
406 Ga0495580_0000174
407 Ga0495582_0000974
408 Ga0495639_0000017
409 Ga0495662_0000179
410 Ga0495664_0021327
411 Ga0495594_0000094
412 Ga0495608_0005415
413 Ga0495628_0025821
414 Ga0495628_0073125
415 Ga0495630_0011407
416 Ga0495666_0243589
417 Ga0495652_0049393
418 Ga0495652_0454919
419 Ga0495665_0000032
420 Ga0495640_0001724
421 Ga0495640_0003404
422 Ga0495587_0018471
423 Ga0495645_0009038
424 Ga0495622_0071966
425 Ga0495622_0204614
426 Ga0495667_0000962
427 Ga0495667_0072190
428 Ga0495634_0011067
429 Ga0495634_0141948
430 Ga0495635_0004380
431 Ga0495635_0006016
432 Ga0495588_0013382
433 Ga0495657_0005422
434 Ga0495599_0000457
435 Ga0495623_0007156
436 Ga0495646_0005193
437 Ga0495646_0050380
438 Ga0495647_0000073
439 Ga0495658_0000921
440 Ga0495613_0001580
441 Ga0495613_0078566
442 Ga0495624_0008573
443 Ga0495600_0016646
444 Ga0495581_0000076
445 Ga0495604_0024441
446 Ga0495604_0255103
447 Ga0495674_0001109
448 Ga0495674_0033114
449 Ga0495676_0018936
450 Ga0495680_0012342
451 Ga0495680_0179100
452 Ga0495675_0001533
453 Ga0495684_0001330
454 Ga0495686_0330200
455 Ga0495593_0002160
456 Ga0495593_0017975
457 Ga0495602_0015205
458 Ga0495614_0045284
459 Ga0496100_0309336
460 Ga0496101_0086113
461 Ga0496104_0068537
462 Ga0496107_0141000
463 Ga0496112_0149125
464 Ga0496115_0059453
465 Ga0496116_0158376
466 Ga0496116_0330058
467 Ga0496117_0156130
468 Ga0496118_0018669
469 Ga0496118_0067617
470 Ga0496119_0270106
471 Ga0496120_0155520
472 Ga0496121_0023068
473 Ga0496121_0189024
474 Ga0496121_0309326
475 Ga0496123_0328558
476 Ga0496124_0032658
477 Ga0496125_0018377
478 Ga0496125_0169378
479 Ga0496126_0013085
480 Ga0496126_0076496
481 Ga0496126_0116079
482 Ga0495682_0137222
483 Ga0501032_0246331
484 Ga0501067_0263684
485 nmdc:mga03n38_19179_c1
486 nmdc:mga0yw44_603353_c1
487 nmdc:mga06z11_318177_c1
488 nmdc:mga07m45_431765_c1
489 nmdc:mga0sz30_216394_c1
490 nmdc:mga0sz30_63687_c1
491 Ga0495601_0004713
492 Ga0495595_0015843
493 Ga0495619_0004881
494 Ga0500595_000589
495 Ga0500637_0004258
496 2935989500
497 2508690939
498 2509147406
499 2513691932
500 2513876586
501 2513892801
502 2514010922
503 2524436680
504 2528852252
505 2617352850
506 2723845674
507 2745079251
508 2805919841
509 2824667770
510 2824676149
511 2824691834
512 2824699437
513 2824710703
514 2824761124
515 2824771186
516 2824779340
517 2838126417
518 2841943509
519 2841950544
520 2841966857
521 2841975608
522 2841988185
523 2847945968
524 2874609705
525 2879108052
526 2885415970
527 2904717266
528 2906632446
529 2922373614
530 2929617348
531 2929627053
532 2932787616
533 2932820882
534 2932834752
535 2933579305
536 2935621710
537 2935642660
538 2935655095
539 2935663973
540 2935667762
541 2935682252
542 2935688508
543 2935695857
544 2935706602
545 2935715527
546 2935725909
547 2935734346
548 2935743725
549 2935754238
550 2935768401
551 2935772652
552 2935783202
553 2935790945
554 2935799354
555 2935806431
556 2935813023
557 2935830675
558 2935840704
559 2935859957
560 2935869408
561 2935880431
562 2935999486
563 2936006532
564 2936018129
565 2936026632
566 2936035375
567 2936041611
568 2936053524
569 2936057056
570 2940560386
571 2941541166
572 8006990195
573 8016514070
574 8016530254
575 8016535514
576 8016548709
577 8016553425
578 8016561802
579 8016573845
580 8016577970
581 8016592628
582 8016599637
583 8016611285
584 8016627361
585 8016631663
586 8017062342
587 8019535246
588 8019544236
589 8019554465
590 8019581796
591 8019589469
592 8019601796
593 8019616756
594 8055747037

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11706

zf-CGNR

CGNR zinc finger

190

233

0.99

PF07336

ABATE

Putative stress-induced transcription regulator

57

183

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3h0n-assembly1.cif.gz_A-2 crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 a resolution 0.6227 13 190
5mmi-assembly1.cif.gz_G structure of the large subunit of the chloroplast ribosome 0.5993 106 145
3h0n-assembly1.cif.gz_A-2 crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 a resolution 0.5936 13 190
4v9b-assembly1.cif.gz_BH crystal structure of the 70s ribosome with tigecycline. 0.5389 108 140
5o60-assembly1.cif.gz_G structure of the 50s large ribosomal subunit from mycobacterium smegmatis 0.485 107 138
ID Description Score Start End Superfamily
3h0nA00 Mainly Alpha;Orthogonal Bundle;Jann2411-like fold;Jann2411-like domain 0.6244 13 190 1.10.3300.10
3h0nA00 Mainly Alpha;Orthogonal Bundle;Jann2411-like fold;Jann2411-like domain 0.5983 13 190 1.10.3300.10
5v7qG01 Alpha Beta;Alpha-Beta Complex;Outer Surface Protein A; domain 3;Ribosomal protein L6 0.5549 107 142 3.90.930.12
af_Q2FYW1_242_359_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.484 91 118 3.30.565.10
af_A0A1X7RBI4_10_80_3.30.1370.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;K Homology domain, type 1 0.4619 94 143 3.30.1370.10
ID Description Score Start End GO Terms
AF-A0A7S7W1Q1-F1-model_v4 Zinc finger CGNR domain-containing protein 0.8938 1 196
AF-A0A538AAM5-F1-model_v4 Zinc finger CGNR domain-containing protein 0.8932 10 174
AF-A0A7S7W1Q1-F1-model_v4 Zinc finger CGNR domain-containing protein 0.8896 1 196
AF-A0A2P4UH83-F1-model_v4 CGNR zinc finger 0.879 12 192
AF-A0A2S9AJ71-F1-model_v4 Zinc finger CGNR domain-containing protein 0.8772 10 193

Map