F393681

General Info

Members Datasets Scaffolds Average Seq Length
297 163 594 101

Family's Representative Sequence

Representative Sequence 3300009148|Ga0105243_11494351|Ga0105243_114943512
Length 118
Sequence MFSTYSPRCVAAHTTGAPSDLTPAARAVRGHRKERVGEVVSNKMTKTIVVRVQRRFPHPRYKKVVTAYSKFYAHDEKSEAKPGDRVRIEETRPFSKLKRWRLVEIVERNTDVALGAPA

Samples

Sample ID Description Type Environment
1 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
2 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
71 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
72 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
73 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
74 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
75 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
76 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
77 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
80 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
81 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
82 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
85 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
92 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
95 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
96 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
97 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
98 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
99 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
100 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
101 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
102 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
105 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
111 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
112 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
117 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
120 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
121 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
122 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
123 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
124 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
127 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
128 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
129 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
130 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
131 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
132 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
133 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
136 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
137 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
138 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
141 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
142 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
145 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
146 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
147 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
148 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
149 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
150 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
151 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
152 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
153 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
154 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
155 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
156 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
157 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
158 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
159 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
160 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
163 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.66
Metatranscriptomes 0.34
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.67
Nodule 0
Rhizoplane 0
Rhizosphere 97.98
Stem 0
Stem Tuber 0
Unclassified 16.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105243_11494351 3300009148 Bacteria 699
2 Ga0058859_10879356 3300004798 Bacteria 547
3 Ga0070690_100017000 3300005330 Bacteria 4367
4 Ga0070690_100866677 3300005330 Unclassified 704
5 Ga0070690_100885374 3300005330 Bacteria 697
6 Ga0070670_100290990 3300005331 Bacteria 1427
7 Ga0070689_100001047 3300005340 Bacteria 17395
8 Ga0070689_100229324 3300005340 Bacteria 1526
9 Ga0070689_100834389 3300005340 Unclassified 812
10 Ga0070675_100595618 3300005354 Bacteria 1002
11 Ga0070688_100024506 3300005365 Bacteria 3561
12 Ga0070688_101124329 3300005365 Bacteria 629
13 Ga0070688_101406477 3300005365 Bacteria 565
14 Ga0070688_101767362 3300005365 Unclassified 507
15 Ga0070701_10052373 3300005438 Bacteria 2120
16 Ga0070701_10699184 3300005438 Bacteria 682
17 Ga0070711_101051792 3300005439 Unclassified 700
18 Ga0070705_100084706 3300005440 Bacteria 1957
19 Ga0070700_100549182 3300005441 Bacteria 897
20 Ga0070694_100022146 3300005444 Bacteria 4070
21 Ga0070708_101205302 3300005445 Unclassified 708
22 Ga0070685_10037632 3300005466 Bacteria 2741
23 Ga0070685_10755804 3300005466 Bacteria 713
24 Ga0070698_101218330 3300005471 Bacteria 702
25 Ga0070698_101413597 3300005471 Bacteria 647
26 Ga0070686_100010098 3300005544 Bacteria 5313
27 Ga0070686_100046755 3300005544 Bacteria 2733
28 Ga0070686_100469120 3300005544 Bacteria 971
29 Ga0070693_100928217 3300005547 Unclassified 654
30 Ga0070704_100088482 3300005549 Bacteria 2301
31 Ga0068857_100505378 3300005577 Bacteria 1135
32 Ga0068859_100522450 3300005617 Bacteria 1282
33 Ga0068859_101879582 3300005617 Unclassified 661
34 Ga0068864_100314197 3300005618 Bacteria 1470
35 Ga0068866_10772386 3300005718 Bacteria 665
36 Ga0068861_100416727 3300005719 Bacteria 1196
37 Ga0068870_10230650 3300005840 Bacteria 1138
38 Ga0068863_101137252 3300005841 Unclassified 786
39 Ga0068858_100056298 3300005842 Bacteria 3635
40 Ga0068858_100952576 3300005842 Unclassified 840
41 Ga0070716_100609552 3300006173 Unclassified 822
42 Ga0097621_100121646 3300006237 Bacteria 2214
43 Ga0097621_101064944 3300006237 Bacteria 758
44 Ga0075431_100082953 3300006847 Bacteria 3309
45 Ga0075433_10628621 3300006852 Unclassified 942
46 Ga0075436_100066239 3300006914 Bacteria 2496
47 Ga0097620_100522479 3300006931 Bacteria 1282
48 Ga0097620_101118060 3300006931 Unclassified 867
49 Ga0097620_101879401 3300006931 Unclassified 661
50 Ga0075435_100178305 3300007076 Bacteria 1795
51 Ga0075435_101226891 3300007076 Bacteria 656
52 Ga0099794_10391078 3300007265 Bacteria 726
53 Ga0111539_10045152 3300009094 Bacteria 5275
54 Ga0111539_10164826 3300009094 Bacteria 2592
55 Ga0111539_10484986 3300009094 Bacteria 1440
56 Ga0111539_10892138 3300009094 Bacteria 1034
57 Ga0111539_11390000 3300009094 Bacteria 814
58 Ga0105243_11122751 3300009148 Bacteria 795
59 Ga0105241_11420356 3300009174 Unclassified 665
60 Ga0105241_12630499 3300009174 Unclassified 506
61 Ga0105242_10117509 3300009176 Bacteria 2277
62 Ga0105242_10354834 3300009176 Bacteria 1355
63 Ga0105248_11168422 3300009177 Bacteria 870
64 Ga0105249_10138475 3300009553 Bacteria 2331
65 Ga0157374_10246600 3300013296 Bacteria 1757
66 Ga0157374_10306615 3300013296 Bacteria 1571
67 Ga0157378_11257995 3300013297 Bacteria 780
68 Ga0157378_11964566 3300013297 Unclassified 635
69 Ga0157378_12347725 3300013297 Unclassified 585
70 Ga0163162_11495507 3300013306 Bacteria 769
71 Ga0157372_11719125 3300013307 Bacteria 722
72 Ga0157375_10824770 3300013308 Bacteria 1075
73 Ga0157375_12072351 3300013308 Unclassified 677
74 Ga0163163_10524728 3300014325 Bacteria 1247
75 Ga0163163_10561909 3300014325 Bacteria 1204
76 Ga0157380_10158710 3300014326 Bacteria 1963
77 Ga0157380_11530456 3300014326 Unclassified 721
78 Ga0207642_10316709 3300025899 Bacteria 910
79 Ga0207643_10314173 3300025908 Bacteria 977
80 Ga0207663_10730640 3300025916 Unclassified 785
81 Ga0207662_11374013 3300025918 Unclassified 502
82 Ga0207681_10226301 3300025923 Bacteria 1450
83 Ga0207650_10245851 3300025925 Bacteria 1447
84 Ga0207659_10628693 3300025926 Bacteria 916
85 Ga0207687_11020968 3300025927 Bacteria 709
86 Ga0207700_10907075 3300025928 Bacteria 789
87 Ga0207670_10029053 3300025936 Bacteria 3518
88 Ga0207670_10193282 3300025936 Bacteria 1541
89 Ga0207665_10202255 3300025939 Bacteria 1448
90 Ga0207711_10769089 3300025941 Bacteria 897
91 Ga0207712_10057928 3300025961 Unclassified 2735
92 Ga0207712_10092925 3300025961 Bacteria 2225
93 Ga0207677_10697516 3300026023 Unclassified 900
94 Ga0207703_10030339 3300026035 Bacteria 4272
95 Ga0207703_12161998 3300026035 Bacteria 532
96 Ga0207639_10500928 3300026041 Bacteria 1110
97 Ga0207708_10177395 3300026075 Bacteria 1690
98 Ga0207708_10330940 3300026075 Bacteria 1245
99 Ga0207708_10417117 3300026075 Bacteria 1113
100 Ga0207708_10636596 3300026075 Bacteria 906
101 Ga0207648_10612135 3300026089 Unclassified 1005
102 Ga0207648_10641288 3300026089 Bacteria 981
103 Ga0207676_10338970 3300026095 Bacteria 1386
104 Ga0207674_11060642 3300026116 Bacteria 780
105 Ga0207428_10662158 3300027907 Unclassified 749
106 Ga0268265_10074137 3300028380 Bacteria 2661
107 Ga0268264_12031849 3300028381 Unclassified 584
108 Ga0265337_1002821 3300028556 Bacteria 7772
109 Ga0265337_1004567 3300028556 Bacteria 5712
110 Ga0265326_10001638 3300028558 Bacteria 7751
111 Ga0265326_10013691 3300028558 Bacteria 2369
112 Ga0265326_10021835 3300028558 Bacteria 1833
113 Ga0265326_10126649 3300028558 Bacteria 727
114 Ga0265319_1007503 3300028563 Bacteria 4898
115 Ga0265319_1274866 3300028563 Unclassified 512
116 Ga0265334_10115823 3300028573 Unclassified 960
117 Ga0265318_10013102 3300028577 Bacteria 3514
118 Ga0265323_10029649 3300028653 Bacteria 2045
119 Ga0265323_10149272 3300028653 Unclassified 749
120 Ga0265322_10050939 3300028654 Bacteria 1175
121 Ga0265336_10134438 3300028666 Bacteria 736
122 Ga0265338_10000105 3300028800 Bacteria 156108
123 Ga0265338_10001116 3300028800 Bacteria 44580
124 Ga0265338_10004100 3300028800 Bacteria 19960
125 Ga0265338_10004347 3300028800 Bacteria 19195
126 Ga0265338_10006820 3300028800 Bacteria 14388
127 Ga0265338_10008597 3300028800 Bacteria 12354
128 Ga0265338_10008694 3300028800 Bacteria 12279
129 Ga0265338_10021305 3300028800 Bacteria 6765
130 Ga0265338_10044480 3300028800 Bacteria 4098
131 Ga0265338_10076995 3300028800 Bacteria 2821
132 Ga0265338_10094870 3300028800 Bacteria 2453
133 Ga0265338_10173339 3300028800 Bacteria 1652
134 Ga0265338_10227002 3300028800 Bacteria 1391
135 Ga0265338_10833328 3300028800 Unclassified 631
136 Ga0265338_11042729 3300028800 Bacteria 552
137 Ga0265324_10008583 3300029957 Bacteria 4052
138 Ga0265324_10018840 3300029957 Bacteria 2489
139 Ga0265324_10079233 3300029957 Bacteria 1118
140 Ga0265324_10089916 3300029957 Bacteria 1044
141 Ga0265330_10315520 3300031235 Unclassified 659
142 Ga0265332_10004727 3300031238 Bacteria 6353
143 Ga0265332_10058883 3300031238 Unclassified 1644
144 Ga0265332_10115645 3300031238 Bacteria 1128
145 Ga0265328_10225798 3300031239 Unclassified 714
146 Ga0265328_10376796 3300031239 Unclassified 555
147 Ga0265320_10000990 3300031240 Bacteria 21089
148 Ga0265320_10002251 3300031240 Bacteria 13551
149 Ga0265320_10073590 3300031240 Bacteria 1605
150 Ga0265320_10104605 3300031240 Bacteria 1301
151 Ga0265320_10444204 3300031240 Unclassified 572
152 Ga0265325_10123662 3300031241 Bacteria 1244
153 Ga0265329_10001842 3300031242 Bacteria 10042
154 Ga0265329_10187380 3300031242 Bacteria 678
155 Ga0265340_10010599 3300031247 Bacteria 4928
156 Ga0265340_10033404 3300031247 Bacteria 2561
157 Ga0265340_10326295 3300031247 Unclassified 679
158 Ga0265339_10004231 3300031249 Bacteria 9836
159 Ga0265339_10029749 3300031249 Bacteria 3097
160 Ga0265331_10199542 3300031250 Bacteria 901
161 Ga0265331_10350841 3300031250 Unclassified 661
162 Ga0265327_10528689 3300031251 Bacteria 507
163 Ga0265316_10006174 3300031344 Bacteria 11492
164 Ga0265316_10083468 3300031344 Bacteria 2448
165 Ga0265316_10252714 3300031344 Bacteria 1294
166 Ga0265316_10611190 3300031344 Bacteria 772
167 Ga0265316_10778997 3300031344 Bacteria 671
168 Ga0265316_11231502 3300031344 Bacteria 517
169 Ga0307513_10345246 3300031456 Bacteria 1238
170 Ga0265313_10019362 3300031595 Bacteria 3789
171 Ga0265313_10042831 3300031595 Bacteria 2220
172 Ga0265313_10110842 3300031595 Bacteria 1207
173 Ga0265314_10000087 3300031711 Bacteria 138681
174 Ga0265314_10096698 3300031711 Bacteria 1909
175 Ga0265314_10155176 3300031711 Bacteria 1399
176 Ga0265342_10029928 3300031712 Bacteria 3378
177 Ga0265342_10150504 3300031712 Bacteria 1292
178 Ga0265342_10155620 3300031712 Bacteria 1267
179 Ga0265342_10328142 3300031712 Bacteria 800
180 Ga0326468_10049896 3300031889 Bacteria 631
181 Ga0307412_11103327 3300031911 Unclassified 706
182 Ga0373934_0465921 3300035086 Bacteria 530
183 Ga0373953_0032690 3300035117 Bacteria 2031
184 Ga0373953_0098304 3300035117 Bacteria 1230
185 Ga0373954_0004503 3300035118 Bacteria 5992
186 Ga0373954_0102650 3300035118 Bacteria 1381
187 Ga0373956_0013877 3300035119 Bacteria 3356
188 Ga0373924_0054358 3300035410 Bacteria 1665
189 Ga0373931_1235137 3300035691 Bacteria 512
190 Ga0373927_0732509 3300035695 Unclassified 653
191 Ga0373933_0072142 3300035724 Bacteria 2103
192 Ga0373947_0898567 3300035725 Bacteria 605
193 Ga0373937_0002552 3300036401 Bacteria 15128
194 Ga0373937_0046230 3300036401 Bacteria 3980
195 Ga0373937_0728155 3300036401 Bacteria 939
196 Ga0373925_0234868 3300037068 Bacteria 1467
197 Ga0395900_1050327 3300037418 Bacteria 733
198 Ga0395905_0110842 3300037471 Bacteria 2577
199 Ga0436364_0317322 3300037853 Unclassified 511
200 Ga0451839_0848337 3300041496 Bacteria 598
201 Ga0439435_0088253 3300042436 Bacteria 939
202 Ga0451577_0270619 3300042876 Bacteria 1539
203 Ga0451577_0652397 3300042876 Bacteria 954
204 Ga0451577_1798163 3300042876 Unclassified 538
205 Ga0453684_0093879 3300044712 Bacteria 3694
206 Ga0453684_0215103 3300044712 Bacteria 2231
207 Ga0453684_0957952 3300044712 Bacteria 913
208 Ga0451576_0023870 3300045051 Bacteria 6614
209 Ga0451576_0277220 3300045051 Bacteria 1753
210 Ga0451576_0290995 3300045051 Bacteria 1708
211 Ga0451576_0292107 3300045051 Bacteria 1704
212 Ga0451576_0852546 3300045051 Bacteria 956
213 Ga0451576_0904984 3300045051 Bacteria 926
214 Ga0451576_0990090 3300045051 Bacteria 881
215 Ga0451576_1386604 3300045051 Bacteria 732
216 Ga0451576_2018600 3300045051 Unclassified 594
217 Ga0495592_0000015 3300046454 Bacteria 145683
218 Ga0495592_0055433 3300046454 Bacteria 2933
219 Ga0495629_0006700 3300046459 Bacteria 8518
220 Ga0495629_0306576 3300046459 Bacteria 1087
221 Ga0495653_0766307 3300046463 Bacteria 582
222 Ga0495662_0012857 3300046476 Bacteria 4080
223 Ga0495664_0006002 3300046477 Bacteria 6694
224 Ga0495664_0133998 3300046477 Bacteria 1501
225 Ga0495594_0707642 3300046499 Unclassified 569
226 Ga0495608_0568016 3300046511 Bacteria 683
227 Ga0495618_0001289 3300046514 Bacteria 16917
228 Ga0495618_0001918 3300046514 Bacteria 13659
229 Ga0495628_0000140 3300046516 Bacteria 62202
230 Ga0495628_0029640 3300046516 Bacteria 4434
231 Ga0495628_0248453 3300046516 Unclassified 1329
232 Ga0495628_1035490 3300046516 Bacteria 563
233 Ga0495630_0095700 3300046517 Bacteria 2245
234 Ga0495663_0386135 3300046525 Unclassified 514
235 Ga0495666_0022514 3300046526 Bacteria 3121
236 Ga0495652_0052011 3300046529 Bacteria 3495
237 Ga0495652_0112740 3300046529 Bacteria 2184
238 Ga0495640_0005038 3300046533 Bacteria 10496
239 Ga0495640_0058160 3300046533 Bacteria 2637
240 Ga0495586_0000979 3300046535 Bacteria 16168
241 Ga0495586_0001064 3300046535 Bacteria 15493
242 Ga0495587_0035036 3300046536 Bacteria 3025
243 Ga0495587_0309328 3300046536 Bacteria 883
244 Ga0495598_0202368 3300046537 Unclassified 718
245 Ga0495621_0203547 3300046539 Bacteria 797
246 Ga0495621_0217798 3300046539 Bacteria 772
247 Ga0495645_0019740 3300046543 Bacteria 4855
248 Ga0495645_0023914 3300046543 Bacteria 4429
249 Ga0495645_0595349 3300046543 Bacteria 681
250 Ga0495622_0334267 3300046557 Bacteria 657
251 Ga0495667_0026521 3300046559 Bacteria 3906
252 Ga0495668_0677772 3300046616 Unclassified 570
253 Ga0495634_0003274 3300046642 Bacteria 13068
254 Ga0495634_0063962 3300046642 Bacteria 2440
255 Ga0495635_0220001 3300046663 Bacteria 1284
256 Ga0495635_0265255 3300046663 Bacteria 1156
257 Ga0495659_0080734 3300046664 Bacteria 1234
258 Ga0495661_0375670 3300046665 Bacteria 695
259 Ga0495657_0076896 3300046675 Bacteria 2167
260 Ga0495599_0002301 3300046678 Bacteria 11109
261 Ga0495599_0009211 3300046678 Bacteria 6026
262 Ga0495599_0401489 3300046678 Bacteria 816
263 Ga0495646_0289586 3300046680 Bacteria 868
264 Ga0495647_0012537 3300046681 Bacteria 2921
265 Ga0495658_0006777 3300046683 Bacteria 5637
266 Ga0495669_0581159 3300046684 Bacteria 545
267 Ga0495613_0003460 3300046689 Bacteria 11805
268 Ga0495624_0006439 3300046690 Bacteria 8332
269 Ga0495581_0048582 3300047315 Bacteria 2450
270 Ga0495604_0142962 3300047317 Bacteria 1708
271 Ga0495604_0223056 3300047317 Bacteria 1297
272 Ga0495674_0000992 3300047319 Bacteria 27284
273 Ga0495674_0290064 3300047319 Bacteria 1338
274 Ga0495680_0002262 3300047322 Bacteria 19840
275 Ga0495680_0393590 3300047322 Bacteria 958
276 Ga0495684_0011576 3300047471 Bacteria 6810
277 Ga0495684_0382864 3300047471 Bacteria 992
278 Ga0495684_0458408 3300047471 Bacteria 884
279 Ga0495684_0840689 3300047471 Bacteria 596
280 Ga0501229_053146 3300049706 Bacteria 603
281 nmdc:mga09592_1059128_c1 3300050508 Bacteria 676
282 nmdc:mga09592_858866_c1 3300050508 Bacteria 765
283 nmdc:mga06r32_13339_c1 3300050510 Bacteria 7443
284 nmdc:mga08y16_1004633_c1 3300050511 Bacteria 814
285 nmdc:mga08y16_1485247_c1 3300050511 Bacteria 639
286 nmdc:mga08y16_1639829_c1 3300050511 Unclassified 600
287 nmdc:mga08y16_2036077_c1 3300050511 Bacteria 523
288 nmdc:mga08y16_584616_c1 3300050511 Bacteria 1127
289 nmdc:mga0n895_842642_c1 3300050512 Bacteria 905
290 nmdc:mga0rr50_44819_c1 3300050513 Bacteria 3246
291 nmdc:mga0rr50_566751_c1 3300050513 Bacteria 967
292 nmdc:mga0rr50_847789_c1 3300050513 Bacteria 779
293 nmdc:mga0a205_451423_c1 3300050515 Unclassified 1145
294 Ga0495601_0850051 3300053077 Bacteria 578
295 Ga0495601_0908998 3300053077 Unclassified 556
296 Ga0500650_0071852 3300053098 Bacteria 1617
297 Ga0500650_0191417 3300053098 Bacteria 934
298 Ga0105243_11494351
299 Ga0058859_10879356
300 Ga0070690_100017000
301 Ga0070690_100866677
302 Ga0070690_100885374
303 Ga0070670_100290990
304 Ga0070689_100001047
305 Ga0070689_100229324
306 Ga0070689_100834389
307 Ga0070675_100595618
308 Ga0070688_100024506
309 Ga0070688_101124329
310 Ga0070688_101406477
311 Ga0070688_101767362
312 Ga0070701_10052373
313 Ga0070701_10699184
314 Ga0070711_101051792
315 Ga0070705_100084706
316 Ga0070700_100549182
317 Ga0070694_100022146
318 Ga0070708_101205302
319 Ga0070685_10037632
320 Ga0070685_10755804
321 Ga0070698_101218330
322 Ga0070698_101413597
323 Ga0070686_100010098
324 Ga0070686_100046755
325 Ga0070686_100469120
326 Ga0070693_100928217
327 Ga0070704_100088482
328 Ga0068857_100505378
329 Ga0068859_100522450
330 Ga0068859_101879582
331 Ga0068864_100314197
332 Ga0068866_10772386
333 Ga0068861_100416727
334 Ga0068870_10230650
335 Ga0068863_101137252
336 Ga0068858_100056298
337 Ga0068858_100952576
338 Ga0070716_100609552
339 Ga0097621_100121646
340 Ga0097621_101064944
341 Ga0075431_100082953
342 Ga0075433_10628621
343 Ga0075436_100066239
344 Ga0097620_100522479
345 Ga0097620_101118060
346 Ga0097620_101879401
347 Ga0075435_100178305
348 Ga0075435_101226891
349 Ga0099794_10391078
350 Ga0111539_10045152
351 Ga0111539_10164826
352 Ga0111539_10484986
353 Ga0111539_10892138
354 Ga0111539_11390000
355 Ga0105243_11122751
356 Ga0105241_11420356
357 Ga0105241_12630499
358 Ga0105242_10117509
359 Ga0105242_10354834
360 Ga0105248_11168422
361 Ga0105249_10138475
362 Ga0157374_10246600
363 Ga0157374_10306615
364 Ga0157378_11257995
365 Ga0157378_11964566
366 Ga0157378_12347725
367 Ga0163162_11495507
368 Ga0157372_11719125
369 Ga0157375_10824770
370 Ga0157375_12072351
371 Ga0163163_10524728
372 Ga0163163_10561909
373 Ga0157380_10158710
374 Ga0157380_11530456
375 Ga0207642_10316709
376 Ga0207643_10314173
377 Ga0207663_10730640
378 Ga0207662_11374013
379 Ga0207681_10226301
380 Ga0207650_10245851
381 Ga0207659_10628693
382 Ga0207687_11020968
383 Ga0207700_10907075
384 Ga0207670_10029053
385 Ga0207670_10193282
386 Ga0207665_10202255
387 Ga0207711_10769089
388 Ga0207712_10057928
389 Ga0207712_10092925
390 Ga0207677_10697516
391 Ga0207703_10030339
392 Ga0207703_12161998
393 Ga0207639_10500928
394 Ga0207708_10177395
395 Ga0207708_10330940
396 Ga0207708_10417117
397 Ga0207708_10636596
398 Ga0207648_10612135
399 Ga0207648_10641288
400 Ga0207676_10338970
401 Ga0207674_11060642
402 Ga0207428_10662158
403 Ga0268265_10074137
404 Ga0268264_12031849
405 Ga0265337_1002821
406 Ga0265337_1004567
407 Ga0265326_10001638
408 Ga0265326_10013691
409 Ga0265326_10021835
410 Ga0265326_10126649
411 Ga0265319_1007503
412 Ga0265319_1274866
413 Ga0265334_10115823
414 Ga0265318_10013102
415 Ga0265323_10029649
416 Ga0265323_10149272
417 Ga0265322_10050939
418 Ga0265336_10134438
419 Ga0265338_10000105
420 Ga0265338_10001116
421 Ga0265338_10004100
422 Ga0265338_10004347
423 Ga0265338_10006820
424 Ga0265338_10008597
425 Ga0265338_10008694
426 Ga0265338_10021305
427 Ga0265338_10044480
428 Ga0265338_10076995
429 Ga0265338_10094870
430 Ga0265338_10173339
431 Ga0265338_10227002
432 Ga0265338_10833328
433 Ga0265338_11042729
434 Ga0265324_10008583
435 Ga0265324_10018840
436 Ga0265324_10079233
437 Ga0265324_10089916
438 Ga0265330_10315520
439 Ga0265332_10004727
440 Ga0265332_10058883
441 Ga0265332_10115645
442 Ga0265328_10225798
443 Ga0265328_10376796
444 Ga0265320_10000990
445 Ga0265320_10002251
446 Ga0265320_10073590
447 Ga0265320_10104605
448 Ga0265320_10444204
449 Ga0265325_10123662
450 Ga0265329_10001842
451 Ga0265329_10187380
452 Ga0265340_10010599
453 Ga0265340_10033404
454 Ga0265340_10326295
455 Ga0265339_10004231
456 Ga0265339_10029749
457 Ga0265331_10199542
458 Ga0265331_10350841
459 Ga0265327_10528689
460 Ga0265316_10006174
461 Ga0265316_10083468
462 Ga0265316_10252714
463 Ga0265316_10611190
464 Ga0265316_10778997
465 Ga0265316_11231502
466 Ga0307513_10345246
467 Ga0265313_10019362
468 Ga0265313_10042831
469 Ga0265313_10110842
470 Ga0265314_10000087
471 Ga0265314_10096698
472 Ga0265314_10155176
473 Ga0265342_10029928
474 Ga0265342_10150504
475 Ga0265342_10155620
476 Ga0265342_10328142
477 Ga0326468_10049896
478 Ga0307412_11103327
479 Ga0373934_0465921
480 Ga0373953_0032690
481 Ga0373953_0098304
482 Ga0373954_0004503
483 Ga0373954_0102650
484 Ga0373956_0013877
485 Ga0373924_0054358
486 Ga0373931_1235137
487 Ga0373927_0732509
488 Ga0373933_0072142
489 Ga0373947_0898567
490 Ga0373937_0002552
491 Ga0373937_0046230
492 Ga0373937_0728155
493 Ga0373925_0234868
494 Ga0395900_1050327
495 Ga0395905_0110842
496 Ga0436364_0317322
497 Ga0451839_0848337
498 Ga0439435_0088253
499 Ga0451577_0270619
500 Ga0451577_0652397
501 Ga0451577_1798163
502 Ga0453684_0093879
503 Ga0453684_0215103
504 Ga0453684_0957952
505 Ga0451576_0023870
506 Ga0451576_0277220
507 Ga0451576_0290995
508 Ga0451576_0292107
509 Ga0451576_0852546
510 Ga0451576_0904984
511 Ga0451576_0990090
512 Ga0451576_1386604
513 Ga0451576_2018600
514 Ga0495592_0000015
515 Ga0495592_0055433
516 Ga0495629_0006700
517 Ga0495629_0306576
518 Ga0495653_0766307
519 Ga0495662_0012857
520 Ga0495664_0006002
521 Ga0495664_0133998
522 Ga0495594_0707642
523 Ga0495608_0568016
524 Ga0495618_0001289
525 Ga0495618_0001918
526 Ga0495628_0000140
527 Ga0495628_0029640
528 Ga0495628_0248453
529 Ga0495628_1035490
530 Ga0495630_0095700
531 Ga0495663_0386135
532 Ga0495666_0022514
533 Ga0495652_0052011
534 Ga0495652_0112740
535 Ga0495640_0005038
536 Ga0495640_0058160
537 Ga0495586_0000979
538 Ga0495586_0001064
539 Ga0495587_0035036
540 Ga0495587_0309328
541 Ga0495598_0202368
542 Ga0495621_0203547
543 Ga0495621_0217798
544 Ga0495645_0019740
545 Ga0495645_0023914
546 Ga0495645_0595349
547 Ga0495622_0334267
548 Ga0495667_0026521
549 Ga0495668_0677772
550 Ga0495634_0003274
551 Ga0495634_0063962
552 Ga0495635_0220001
553 Ga0495635_0265255
554 Ga0495659_0080734
555 Ga0495661_0375670
556 Ga0495657_0076896
557 Ga0495599_0002301
558 Ga0495599_0009211
559 Ga0495599_0401489
560 Ga0495646_0289586
561 Ga0495647_0012537
562 Ga0495658_0006777
563 Ga0495669_0581159
564 Ga0495613_0003460
565 Ga0495624_0006439
566 Ga0495581_0048582
567 Ga0495604_0142962
568 Ga0495604_0223056
569 Ga0495674_0000992
570 Ga0495674_0290064
571 Ga0495680_0002262
572 Ga0495680_0393590
573 Ga0495684_0011576
574 Ga0495684_0382864
575 Ga0495684_0458408
576 Ga0495684_0840689
577 Ga0501229_053146
578 nmdc:mga09592_1059128_c1
579 nmdc:mga09592_858866_c1
580 nmdc:mga06r32_13339_c1
581 nmdc:mga08y16_1004633_c1
582 nmdc:mga08y16_1485247_c1
583 nmdc:mga08y16_1639829_c1
584 nmdc:mga08y16_2036077_c1
585 nmdc:mga08y16_584616_c1
586 nmdc:mga0n895_842642_c1
587 nmdc:mga0rr50_44819_c1
588 nmdc:mga0rr50_566751_c1
589 nmdc:mga0rr50_847789_c1
590 nmdc:mga0a205_451423_c1
591 Ga0495601_0850051
592 Ga0495601_0908998
593 Ga0500650_0071852
594 Ga0500650_0191417

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00366

Ribosomal_S17

Ribosomal protein S17

37

104

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fmw-assembly1.cif.gz_Q the structure of a hibernating ribosome in the lyme disease pathogen 0.9092 12 91
5j4d-assembly2.cif.gz_ED e. coli release factor 1 bound to the 70s ribosome in response to a pseudouridylated stop codon 0.9022 15 90
8d8k-assembly1.cif.gz_Q yeast mitochondrial small subunit assembly intermediate (state 2) 0.9011 15 92
4v4w-assembly1.cif.gz_AQ structure of a secm-stalled e. coli ribosome complex obtained by fitting atomic models for rna and protein components into cryo-em map emd-1143 0.8995 16 91
5mrc-assembly1.cif.gz_QQ structure of the yeast mitochondrial ribosome - class a 0.8987 15 91
ID Description Score Start End Superfamily
af_C6T0V9_1_79_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9131 16 92 2.40.50.140
af_Q03246_1_107_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9093 13 92 2.40.50.140
af_Q4E4R7_93_168_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8997 18 90 2.40.50.140
af_Q2FW15_6_86_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8966 14 92 2.40.50.140
3ms0Q00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.894 15 92 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A853CCF9-F1-model_v4 Small ribosomal subunit protein uS17 0.92 12 92 GO:0003735
GO:0006412
GO:0019843
GO:0022627
AF-A0A2H0XRV3-F1-model_v4 Small ribosomal subunit protein uS17 0.9168 15 90 GO:0003735
GO:0006412
GO:0019843
GO:0022627
AF-A0A0G4IRN8-F1-model_v4 Small ribosomal subunit protein uS17c 0.9164 15 93 GO:0003735
GO:0005739
GO:0005840
GO:0006412
GO:0019843
GO:1990904
AF-A0A523V837-F1-model_v4 Small ribosomal subunit protein uS17 0.9153 14 94 GO:0003735
GO:0006412
GO:0019843
GO:0022627
AF-A0A7C3EAH3-F1-model_v4 Small ribosomal subunit protein uS17 0.9147 12 95 GO:0003735
GO:0006412
GO:0019843
GO:0022627

Map