F393195

General Info

Members Datasets Scaffolds Average Seq Length
296 148 592 278

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10511388|Ga0157380_105113882
Length 316
Sequence LEDWKIKQYVVSLKGNMEKVTKMAEKRAANALSGRSIAFIGGGAMAGAMIGGLLNSHAVESKAITASDPHPDRIQDLEKRFGVATTGDNLKAARNAEIVILSVKPQMLRFVFRDLCGKLGKDALVLSIIAGARIESMTQGLKHGAIVRSMPNTPAQVAEGMTVWTSNAAVTAAQREQAQTILKAFGKELYVADEAFLDMATAISGSGPSYVFLFMEALIDAAVHLGFSREDARTLVTQTVRGSAIYAEHSPSHPAEMRNLVTSPGGTSAHALYQLEKGGFRTLLSKAVWAAFQRSVSLSALNSAVQPFEEKDDTDG

Samples

Sample ID Description Type Environment
1 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
62 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
63 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
64 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
65 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
66 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
67 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
68 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
69 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
70 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
71 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
72 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
73 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
74 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
75 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
79 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
80 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
81 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
82 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
83 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
84 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
85 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
86 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
87 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
88 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
92 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
93 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
94 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
95 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
96 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
97 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
98 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
99 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
100 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
103 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
104 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
105 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
106 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
107 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
108 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
109 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
122 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
145 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.34
Nodule 0
Rhizoplane 1.01
Rhizosphere 96.96
Stem 0
Stem Tuber 0
Unclassified 6.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157380_10511388 3300014326 Bacteria 1169
2 Ga0065715_10099435 3300005293 Bacteria 3412
3 Ga0065707_10000894 3300005295 Bacteria 9824
4 Ga0070677_10082315 3300005333 Bacteria 1380
5 Ga0070666_10015820 3300005335 Bacteria 4818
6 Ga0070689_100002444 3300005340 Bacteria 12133
7 Ga0070689_100017552 3300005340 Bacteria 5260
8 Ga0070692_10072101 3300005345 Bacteria 1842
9 Ga0070669_100083583 3300005353 Bacteria 2381
10 Ga0070675_100075549 3300005354 Bacteria 2801
11 Ga0070674_100066802 3300005356 Bacteria 2528
12 Ga0070674_100090419 3300005356 Bacteria 2208
13 Ga0070700_100080425 3300005441 Bacteria 2103
14 Ga0070694_100023559 3300005444 Bacteria 3961
15 Ga0070708_100001148 3300005445 Bacteria 20333
16 Ga0070708_100014743 3300005445 Bacteria 6439
17 Ga0070708_100022027 3300005445 Bacteria 5401
18 Ga0070678_100366982 3300005456 Bacteria 1242
19 Ga0070681_10020669 3300005458 Bacteria 6595
20 Ga0070706_100083382 3300005467 Bacteria 2961
21 Ga0070706_100130635 3300005467 Bacteria 2343
22 Ga0070707_100025247 3300005468 Bacteria 5635
23 Ga0070707_100033577 3300005468 Bacteria 4892
24 Ga0070698_100054701 3300005471 Bacteria 4051
25 Ga0070699_100171429 3300005518 Bacteria 1923
26 Ga0070679_100415596 3300005530 Bacteria 1291
27 Ga0070697_100419381 3300005536 Bacteria 1163
28 Ga0070686_100538835 3300005544 Bacteria 911
29 Ga0070695_100005508 3300005545 Bacteria 7459
30 Ga0070695_100272515 3300005545 Bacteria 1240
31 Ga0070696_100064066 3300005546 Bacteria 2576
32 Ga0070696_100322533 3300005546 Bacteria 1189
33 Ga0070704_100048441 3300005549 Bacteria 2975
34 Ga0068857_100671483 3300005577 Bacteria 983
35 Ga0068859_100013563 3300005617 Bacteria 8172
36 Ga0068859_100070801 3300005617 Bacteria 3523
37 Ga0068859_100425281 3300005617 Bacteria 1425
38 Ga0068861_100167347 3300005719 Bacteria 1819
39 Ga0068863_100007241 3300005841 Bacteria 10870
40 Ga0068862_100340025 3300005844 Bacteria 1390
41 Ga0081539_10043331 3300005985 Bacteria 2610
42 Ga0075428_100000003 3300006844 Bacteria 365483
43 Ga0075428_100072846 3300006844 Bacteria 3752
44 Ga0075431_100182076 3300006847 Bacteria 2156
45 Ga0075433_10041808 3300006852 Bacteria 3974
46 Ga0075434_100176793 3300006871 Bacteria 2154
47 Ga0075429_100068662 3300006880 Bacteria 3085
48 Ga0097620_100013563 3300006931 Bacteria 8172
49 Ga0097620_100070800 3300006931 Bacteria 3523
50 Ga0097620_100425294 3300006931 Bacteria 1425
51 Ga0075435_100279139 3300007076 Bacteria 1426
52 Ga0111539_10000001 3300009094 Bacteria 1035431
53 Ga0111539_10003662 3300009094 Bacteria 20240
54 Ga0111539_10036171 3300009094 Bacteria 5972
55 Ga0111539_10132194 3300009094 Bacteria 2922
56 Ga0111539_10173203 3300009094 Bacteria 2521
57 Ga0111539_10637563 3300009094 Bacteria 1241
58 Ga0114129_10432837 3300009147 Bacteria 1728
59 Ga0114129_10517200 3300009147 Unclassified 1557
60 Ga0105242_10107007 3300009176 Bacteria 2378
61 Ga0105249_10403271 3300009553 Bacteria 1398
62 Ga0157375_10000211 3300013308 Bacteria 54524
63 Ga0157375_11020106 3300013308 Bacteria 966
64 Ga0163163_10000124 3300014325 Bacteria 81990
65 Ga0157380_10225846 3300014326 Bacteria 1678
66 Ga0157380_10243302 3300014326 Unclassified 1624
67 Ga0207684_10275501 3300025910 Bacteria 1451
68 Ga0207707_10221506 3300025912 Bacteria 1647
69 Ga0207663_10441064 3300025916 Bacteria 1003
70 Ga0207652_10079465 3300025921 Bacteria 2865
71 Ga0207646_10018214 3300025922 Bacteria 6555
72 Ga0207646_10022243 3300025922 Bacteria 5846
73 Ga0207646_10140911 3300025922 Bacteria 2171
74 Ga0207650_10316202 3300025925 Bacteria 1278
75 Ga0207706_10128404 3300025933 Bacteria 2229
76 Ga0207670_10000674 3300025936 Bacteria 18074
77 Ga0207670_10133885 3300025936 Unclassified 1820
78 Ga0207670_10240081 3300025936 Bacteria 1396
79 Ga0207665_10015852 3300025939 Bacteria 4946
80 Ga0207708_10104440 3300026075 Bacteria 2195
81 Ga0207641_10103277 3300026088 Bacteria 2514
82 Ga0207674_10619709 3300026116 Bacteria 1045
83 Ga0207675_100029567 3300026118 Bacteria 5104
84 Ga0207675_100120958 3300026118 Bacteria 2477
85 Ga0207683_10446636 3300026121 Bacteria 1192
86 Ga0207428_10000002 3300027907 Bacteria 854851
87 Ga0207428_10043215 3300027907 Bacteria 3641
88 Ga0268264_10314348 3300028381 Bacteria 1479
89 Ga0265334_10035703 3300028573 Viruses 1966
90 Ga0265334_10123328 3300028573 Unclassified 925
91 Ga0265338_10089465 3300028800 Unclassified 2551
92 Ga0265324_10072290 3300029957 Bacteria 1175
93 Ga0265327_10001138 3300031251 Bacteria 36461
94 Ga0316575_10014340 3300031665 Unclassified 2974
95 Ga0316579_10014115 3300031691 Bacteria 3445
96 Ga0316579_10042866 3300031691 Bacteria 2103
97 Ga0316578_10005577 3300031728 Bacteria 6118
98 Ga0316577_10020600 3300031733 Bacteria 3654
99 Ga0316577_10021276 3300031733 Bacteria 3598
100 Ga0307410_10301254 3300031852 Unclassified 1265
101 Ga0307414_10278614 3300032004 Bacteria 1404
102 Ga0373961_0081051 3300035241 Bacteria 1021
103 Ga0316574_0033219 3300035398 Bacteria 3140
104 Ga0373937_0180838 3300036401 Bacteria 1980
105 Ga0316582_0006911 3300036647 Bacteria 6003
106 Ga0316582_0021196 3300036647 Bacteria 3835
107 Ga0316582_0120310 3300036647 Unclassified 1756
108 Ga0316582_0139582 3300036647 Bacteria 1633
109 Ga0316584_0031909 3300036712 Bacteria 3896
110 Ga0316584_0178963 3300036712 Bacteria 1570
111 Ga0373925_0286360 3300037068 Bacteria 1328
112 Ga0395901_0228605 3300038443 Unclassified 1943
113 Ga0395901_0333080 3300038443 Unclassified 1569
114 Ga0400490_28222 3300038726 Unclassified 2201
115 Ga0400490_53304 3300038726 Bacteria 2039
116 Ga0400489_49202 3300039093 Unclassified 2697
117 Ga0439460_0037261 3300042461 Bacteria 1414
118 Ga0451577_0091610 3300042876 Bacteria 2713
119 Ga0453684_0005676 3300044712 Bacteria 24473
120 Ga0453684_0226575 3300044712 Bacteria 2161
121 Ga0451576_0045451 3300045051 Bacteria 4625
122 Ga0451576_0167315 3300045051 Unclassified 2294
123 Ga0451576_0198082 3300045051 Bacteria 2098
124 Ga0451576_0323405 3300045051 Bacteria 1614
125 Ga0495592_0000243 3300046454 Bacteria 46498
126 Ga0495582_0041875 3300046473 Bacteria 2523
127 Ga0495662_0034154 3300046476 Bacteria 2456
128 Ga0495664_0004775 3300046477 Bacteria 7415
129 Ga0495618_0004988 3300046514 Bacteria 8111
130 Ga0495628_0000588 3300046516 Bacteria 33447
131 Ga0495630_0000049 3300046517 Bacteria 97884
132 Ga0495630_0323258 3300046517 Bacteria 1179
133 Ga0495666_0008865 3300046526 Bacteria 5039
134 Ga0495666_0051570 3300046526 Bacteria 1976
135 Ga0495652_0027486 3300046529 Bacteria 5011
136 Ga0495665_0018496 3300046531 Bacteria 3744
137 Ga0495640_0020648 3300046533 Bacteria 4845
138 Ga0495586_0000185 3300046535 Bacteria 41119
139 Ga0495586_0000249 3300046535 Bacteria 35735
140 Ga0495587_0179516 3300046536 Unclassified 1201
141 Ga0495645_0005912 3300046543 Bacteria 8453
142 Ga0495645_0029508 3300046543 Bacteria 3989
143 Ga0495634_0007604 3300046642 Bacteria 8118
144 Ga0495599_0009396 3300046678 Bacteria 5975
145 Ga0495581_0064033 3300047315 Bacteria 2124
146 Ga0495674_0002484 3300047319 Bacteria 17985
147 Ga0495676_0040484 3300047321 Bacteria 3846
148 Ga0495680_0081423 3300047322 Unclassified 2444
149 Ga0496106_0069394 3300048909 Bacteria 2690
150 Ga0496107_0119318 3300048910 Bacteria 1942
151 Ga0496112_0447933 3300048915 Bacteria 1229
152 Ga0496122_0181193 3300048925 Bacteria 1256
153 Ga0496123_0139032 3300048926 Bacteria 1331
154 Ga0501031_0005094 3300049568 Bacteria 8553
155 Ga0501031_0255110 3300049568 Bacteria 1140
156 Ga0501032_0130684 3300049569 Bacteria 1657
157 Ga0501033_0145526 3300049570 Unclassified 1712
158 Ga0501033_0167762 3300049570 Bacteria 1578
159 Ga0501036_0028983 3300049572 Bacteria 4678
160 Ga0501036_0128223 3300049572 Bacteria 2142
161 Ga0501036_0514424 3300049572 Bacteria 996
162 Ga0501037_0034864 3300049573 Bacteria 3712
163 Ga0501037_0095086 3300049573 Bacteria 2154
164 Ga0501038_0014206 3300049574 Bacteria 7255
165 Ga0501038_0088812 3300049574 Bacteria 2594
166 Ga0501038_0236621 3300049574 Bacteria 1451
167 Ga0501038_0296327 3300049574 Bacteria 1270
168 Ga0501039_0004031 3300049575 Bacteria 11038
169 Ga0501039_0006914 3300049575 Bacteria 8632
170 Ga0501039_0040004 3300049575 Bacteria 3620
171 Ga0501039_0040633 3300049575 Bacteria 3590
172 Ga0501039_0114695 3300049575 Bacteria 2108
173 Ga0501040_0000561 3300049576 Bacteria 22513
174 Ga0501040_0002742 3300049576 Bacteria 11345
175 Ga0501040_0035613 3300049576 Bacteria 3376
176 Ga0501040_0054931 3300049576 Bacteria 2731
177 Ga0501040_0080890 3300049576 Bacteria 2251
178 Ga0501040_0294956 3300049576 Bacteria 1159
179 Ga0501040_0349321 3300049576 Unclassified 1059
180 Ga0501041_0004422 3300049577 Bacteria 8129
181 Ga0501041_0020083 3300049577 Bacteria 3990
182 Ga0501041_0082707 3300049577 Bacteria 1978
183 Ga0501042_0045203 3300049578 Bacteria 3138
184 Ga0501046_0022503 3300049580 Bacteria 5193
185 Ga0501046_0054448 3300049580 Bacteria 3147
186 Ga0501046_0071984 3300049580 Bacteria 2685
187 Ga0501046_0100692 3300049580 Bacteria 2217
188 Ga0501046_0169721 3300049580 Bacteria 1638
189 Ga0501046_0363984 3300049580 Bacteria 1048
190 Ga0501048_0003106 3300049582 Bacteria 12674
191 Ga0501048_0032210 3300049582 Bacteria 3789
192 Ga0501067_0002008 3300049583 Bacteria 11209
193 Ga0501067_0041214 3300049583 Bacteria 2564
194 Ga0501068_0026628 3300049584 Bacteria 3408
195 Ga0501068_0064805 3300049584 Bacteria 2224
196 Ga0501068_0085790 3300049584 Bacteria 1938
197 Ga0501068_0108351 3300049584 Unclassified 1726
198 Ga0501068_0161551 3300049584 Bacteria 1412
199 Ga0501069_0002860 3300049585 Bacteria 8848
200 Ga0501069_0033204 3300049585 Bacteria 2842
201 Ga0501071_0007808 3300049587 Bacteria 7054
202 Ga0501071_0009612 3300049587 Bacteria 6451
203 Ga0501071_0033241 3300049587 Bacteria 3664
204 Ga0501071_0055797 3300049587 Bacteria 2852
205 Ga0501071_0066583 3300049587 Bacteria 2618
206 Ga0501071_0126517 3300049587 Bacteria 1897
207 Ga0501071_0231982 3300049587 Bacteria 1390
208 Ga0501072_0001870 3300049588 Bacteria 15679
209 Ga0501072_0029305 3300049588 Bacteria 4299
210 Ga0501072_0090557 3300049588 Bacteria 2428
211 Ga0501072_0136953 3300049588 Bacteria 1952
212 Ga0501072_0529699 3300049588 Bacteria 931
213 Ga0501073_0136889 3300049589 Bacteria 1697
214 Ga0501073_0274317 3300049589 Bacteria 1164
215 Ga0501074_0039645 3300049590 Bacteria 3411
216 Ga0501074_0050483 3300049590 Bacteria 3003
217 Ga0501074_0063678 3300049590 Bacteria 2656
218 Ga0501074_0191525 3300049590 Bacteria 1458
219 Ga0501075_0001413 3300049591 Bacteria 15645
220 Ga0501075_0003780 3300049591 Bacteria 10178
221 Ga0501075_0038753 3300049591 Bacteria 3564
222 Ga0501075_0041317 3300049591 Bacteria 3456
223 Ga0501075_0078819 3300049591 Bacteria 2493
224 Ga0501075_0090682 3300049591 Bacteria 2319
225 Ga0501075_0092516 3300049591 Bacteria 2295
226 Ga0501075_0183530 3300049591 Bacteria 1596
227 Ga0501075_0318374 3300049591 Bacteria 1185
228 Ga0501076_0001439 3300049592 Bacteria 15991
229 Ga0501076_0015260 3300049592 Bacteria 5803
230 Ga0501076_0023533 3300049592 Bacteria 4750
231 Ga0501076_0040823 3300049592 Bacteria 3647
232 Ga0501076_0099446 3300049592 Bacteria 2343
233 Ga0501076_0117217 3300049592 Bacteria 2155
234 Ga0501076_0132686 3300049592 Bacteria 2020
235 Ga0501077_0014292 3300049593 Bacteria 4986
236 Ga0501077_0026562 3300049593 Bacteria 3674
237 Ga0501077_0396060 3300049593 Unclassified 883
238 Ga0501079_0003355 3300049741 Bacteria 11740
239 Ga0501079_0007112 3300049741 Bacteria 8445
240 Ga0501079_0009404 3300049741 Bacteria 7408
241 Ga0501079_0009433 3300049741 Bacteria 7396
242 Ga0501079_0016483 3300049741 Bacteria 5643
243 Ga0501079_0021425 3300049741 Bacteria 4944
244 Ga0501079_0051936 3300049741 Bacteria 3165
245 Ga0501079_0093294 3300049741 Bacteria 2332
246 Ga0501079_0264992 3300049741 Bacteria 1343
247 Ga0501080_0005915 3300049742 Bacteria 10958
248 Ga0501080_0014374 3300049742 Bacteria 7289
249 Ga0501080_0118530 3300049742 Bacteria 2454
250 Ga0501080_0154888 3300049742 Bacteria 2117
251 Ga0501081_0000901 3300049743 Bacteria 17628
252 Ga0501081_0006234 3300049743 Bacteria 7732
253 Ga0501081_0007624 3300049743 Bacteria 7018
254 Ga0501081_0030151 3300049743 Bacteria 3670
255 Ga0501083_0118958 3300049744 Bacteria 1733
256 Ga0501083_0119014 3300049744 Bacteria 1733
257 Ga0501083_0210070 3300049744 Bacteria 1269
258 Ga0501035_0133196 3300049822 Bacteria 2165
259 Ga0501035_0201006 3300049822 Bacteria 1709
260 Ga0501035_0308991 3300049822 Bacteria 1330
261 Ga0501045_0006361 3300049824 Bacteria 8175
262 Ga0501045_0066049 3300049824 Bacteria 2656
263 Ga0501045_0162163 3300049824 Bacteria 1664
264 nmdc:mga05p37_389000_c1 3300050507 Bacteria 1631
265 nmdc:mga09592_60453_c1 3300050508 Bacteria 3203
266 nmdc:mga06r32_33162_c1 3300050510 Bacteria 4862
267 nmdc:mga06r32_346459_c1 3300050510 Unclassified 1470
268 nmdc:mga08y16_3_c1 3300050511 Bacteria 936907
269 nmdc:mga08y16_562662_c1 3300050511 Bacteria 1153
270 nmdc:mga08y16_75290_c1 3300050511 Bacteria 3519
271 nmdc:mga0n895_1008945_c1 3300050512 Bacteria 813
272 nmdc:mga0n895_782014_c1 3300050512 Bacteria 946
273 nmdc:mga08x19_363419_c1 3300050514 Bacteria 1012
274 nmdc:mga0a205_185385_c1 3300050515 Bacteria 1974
275 Ga0495601_0319948 3300053077 Bacteria 1010
276 Ga0500559_0044174 3300053136 Bacteria 1948
277 Ga0501084_0008083 3300054114 Bacteria 8662
278 Ga0501084_0015345 3300054114 Bacteria 6351
279 Ga0501084_0016884 3300054114 Bacteria 6066
280 Ga0501084_0020659 3300054114 Bacteria 5492
281 Ga0501084_0083840 3300054114 Bacteria 2675
282 Ga0501084_0185562 3300054114 Bacteria 1755
283 Ga0501084_0248335 3300054114 Bacteria 1502
284 Ga0501082_0006563 3300060353 Bacteria 10078
285 Ga0501082_0011647 3300060353 Bacteria 7561
286 Ga0501082_0021469 3300060353 Bacteria 5569
287 Ga0501082_0034621 3300060353 Bacteria 4353
288 Ga0530510_0004905 3300061734 Bacteria 9243
289 Ga0530510_0041127 3300061734 Bacteria 3337
290 Ga0530510_0045440 3300061734 Bacteria 3173
291 Ga0530510_0065914 3300061734 Bacteria 2624
292 Ga0530510_0081846 3300061734 Bacteria 2351
293 Ga0530510_0084055 3300061734 Bacteria 2318
294 Ga0530510_0174568 3300061734 Bacteria 1592
295 Ga0530510_0216278 3300061734 Bacteria 1424
296 Ga0530510_0222132 3300061734 Bacteria 1404
297 Ga0157380_10511388
298 Ga0065715_10099435
299 Ga0065707_10000894
300 Ga0070677_10082315
301 Ga0070666_10015820
302 Ga0070689_100002444
303 Ga0070689_100017552
304 Ga0070692_10072101
305 Ga0070669_100083583
306 Ga0070675_100075549
307 Ga0070674_100066802
308 Ga0070674_100090419
309 Ga0070700_100080425
310 Ga0070694_100023559
311 Ga0070708_100001148
312 Ga0070708_100014743
313 Ga0070708_100022027
314 Ga0070678_100366982
315 Ga0070681_10020669
316 Ga0070706_100083382
317 Ga0070706_100130635
318 Ga0070707_100025247
319 Ga0070707_100033577
320 Ga0070698_100054701
321 Ga0070699_100171429
322 Ga0070679_100415596
323 Ga0070697_100419381
324 Ga0070686_100538835
325 Ga0070695_100005508
326 Ga0070695_100272515
327 Ga0070696_100064066
328 Ga0070696_100322533
329 Ga0070704_100048441
330 Ga0068857_100671483
331 Ga0068859_100013563
332 Ga0068859_100070801
333 Ga0068859_100425281
334 Ga0068861_100167347
335 Ga0068863_100007241
336 Ga0068862_100340025
337 Ga0081539_10043331
338 Ga0075428_100000003
339 Ga0075428_100072846
340 Ga0075431_100182076
341 Ga0075433_10041808
342 Ga0075434_100176793
343 Ga0075429_100068662
344 Ga0097620_100013563
345 Ga0097620_100070800
346 Ga0097620_100425294
347 Ga0075435_100279139
348 Ga0111539_10000001
349 Ga0111539_10003662
350 Ga0111539_10036171
351 Ga0111539_10132194
352 Ga0111539_10173203
353 Ga0111539_10637563
354 Ga0114129_10432837
355 Ga0114129_10517200
356 Ga0105242_10107007
357 Ga0105249_10403271
358 Ga0157375_10000211
359 Ga0157375_11020106
360 Ga0163163_10000124
361 Ga0157380_10225846
362 Ga0157380_10243302
363 Ga0207684_10275501
364 Ga0207707_10221506
365 Ga0207663_10441064
366 Ga0207652_10079465
367 Ga0207646_10018214
368 Ga0207646_10022243
369 Ga0207646_10140911
370 Ga0207650_10316202
371 Ga0207706_10128404
372 Ga0207670_10000674
373 Ga0207670_10133885
374 Ga0207670_10240081
375 Ga0207665_10015852
376 Ga0207708_10104440
377 Ga0207641_10103277
378 Ga0207674_10619709
379 Ga0207675_100029567
380 Ga0207675_100120958
381 Ga0207683_10446636
382 Ga0207428_10000002
383 Ga0207428_10043215
384 Ga0268264_10314348
385 Ga0265334_10035703
386 Ga0265334_10123328
387 Ga0265338_10089465
388 Ga0265324_10072290
389 Ga0265327_10001138
390 Ga0316575_10014340
391 Ga0316579_10014115
392 Ga0316579_10042866
393 Ga0316578_10005577
394 Ga0316577_10020600
395 Ga0316577_10021276
396 Ga0307410_10301254
397 Ga0307414_10278614
398 Ga0373961_0081051
399 Ga0316574_0033219
400 Ga0373937_0180838
401 Ga0316582_0006911
402 Ga0316582_0021196
403 Ga0316582_0120310
404 Ga0316582_0139582
405 Ga0316584_0031909
406 Ga0316584_0178963
407 Ga0373925_0286360
408 Ga0395901_0228605
409 Ga0395901_0333080
410 Ga0400490_28222
411 Ga0400490_53304
412 Ga0400489_49202
413 Ga0439460_0037261
414 Ga0451577_0091610
415 Ga0453684_0005676
416 Ga0453684_0226575
417 Ga0451576_0045451
418 Ga0451576_0167315
419 Ga0451576_0198082
420 Ga0451576_0323405
421 Ga0495592_0000243
422 Ga0495582_0041875
423 Ga0495662_0034154
424 Ga0495664_0004775
425 Ga0495618_0004988
426 Ga0495628_0000588
427 Ga0495630_0000049
428 Ga0495630_0323258
429 Ga0495666_0008865
430 Ga0495666_0051570
431 Ga0495652_0027486
432 Ga0495665_0018496
433 Ga0495640_0020648
434 Ga0495586_0000185
435 Ga0495586_0000249
436 Ga0495587_0179516
437 Ga0495645_0005912
438 Ga0495645_0029508
439 Ga0495634_0007604
440 Ga0495599_0009396
441 Ga0495581_0064033
442 Ga0495674_0002484
443 Ga0495676_0040484
444 Ga0495680_0081423
445 Ga0496106_0069394
446 Ga0496107_0119318
447 Ga0496112_0447933
448 Ga0496122_0181193
449 Ga0496123_0139032
450 Ga0501031_0005094
451 Ga0501031_0255110
452 Ga0501032_0130684
453 Ga0501033_0145526
454 Ga0501033_0167762
455 Ga0501036_0028983
456 Ga0501036_0128223
457 Ga0501036_0514424
458 Ga0501037_0034864
459 Ga0501037_0095086
460 Ga0501038_0014206
461 Ga0501038_0088812
462 Ga0501038_0236621
463 Ga0501038_0296327
464 Ga0501039_0004031
465 Ga0501039_0006914
466 Ga0501039_0040004
467 Ga0501039_0040633
468 Ga0501039_0114695
469 Ga0501040_0000561
470 Ga0501040_0002742
471 Ga0501040_0035613
472 Ga0501040_0054931
473 Ga0501040_0080890
474 Ga0501040_0294956
475 Ga0501040_0349321
476 Ga0501041_0004422
477 Ga0501041_0020083
478 Ga0501041_0082707
479 Ga0501042_0045203
480 Ga0501046_0022503
481 Ga0501046_0054448
482 Ga0501046_0071984
483 Ga0501046_0100692
484 Ga0501046_0169721
485 Ga0501046_0363984
486 Ga0501048_0003106
487 Ga0501048_0032210
488 Ga0501067_0002008
489 Ga0501067_0041214
490 Ga0501068_0026628
491 Ga0501068_0064805
492 Ga0501068_0085790
493 Ga0501068_0108351
494 Ga0501068_0161551
495 Ga0501069_0002860
496 Ga0501069_0033204
497 Ga0501071_0007808
498 Ga0501071_0009612
499 Ga0501071_0033241
500 Ga0501071_0055797
501 Ga0501071_0066583
502 Ga0501071_0126517
503 Ga0501071_0231982
504 Ga0501072_0001870
505 Ga0501072_0029305
506 Ga0501072_0090557
507 Ga0501072_0136953
508 Ga0501072_0529699
509 Ga0501073_0136889
510 Ga0501073_0274317
511 Ga0501074_0039645
512 Ga0501074_0050483
513 Ga0501074_0063678
514 Ga0501074_0191525
515 Ga0501075_0001413
516 Ga0501075_0003780
517 Ga0501075_0038753
518 Ga0501075_0041317
519 Ga0501075_0078819
520 Ga0501075_0090682
521 Ga0501075_0092516
522 Ga0501075_0183530
523 Ga0501075_0318374
524 Ga0501076_0001439
525 Ga0501076_0015260
526 Ga0501076_0023533
527 Ga0501076_0040823
528 Ga0501076_0099446
529 Ga0501076_0117217
530 Ga0501076_0132686
531 Ga0501077_0014292
532 Ga0501077_0026562
533 Ga0501077_0396060
534 Ga0501079_0003355
535 Ga0501079_0007112
536 Ga0501079_0009404
537 Ga0501079_0009433
538 Ga0501079_0016483
539 Ga0501079_0021425
540 Ga0501079_0051936
541 Ga0501079_0093294
542 Ga0501079_0264992
543 Ga0501080_0005915
544 Ga0501080_0014374
545 Ga0501080_0118530
546 Ga0501080_0154888
547 Ga0501081_0000901
548 Ga0501081_0006234
549 Ga0501081_0007624
550 Ga0501081_0030151
551 Ga0501083_0118958
552 Ga0501083_0119014
553 Ga0501083_0210070
554 Ga0501035_0133196
555 Ga0501035_0201006
556 Ga0501035_0308991
557 Ga0501045_0006361
558 Ga0501045_0066049
559 Ga0501045_0162163
560 nmdc:mga05p37_389000_c1
561 nmdc:mga09592_60453_c1
562 nmdc:mga06r32_33162_c1
563 nmdc:mga06r32_346459_c1
564 nmdc:mga08y16_3_c1
565 nmdc:mga08y16_562662_c1
566 nmdc:mga08y16_75290_c1
567 nmdc:mga0n895_1008945_c1
568 nmdc:mga0n895_782014_c1
569 nmdc:mga08x19_363419_c1
570 nmdc:mga0a205_185385_c1
571 Ga0495601_0319948
572 Ga0500559_0044174
573 Ga0501084_0008083
574 Ga0501084_0015345
575 Ga0501084_0016884
576 Ga0501084_0020659
577 Ga0501084_0083840
578 Ga0501084_0185562
579 Ga0501084_0248335
580 Ga0501082_0006563
581 Ga0501082_0011647
582 Ga0501082_0021469
583 Ga0501082_0034621
584 Ga0530510_0004905
585 Ga0530510_0041127
586 Ga0530510_0045440
587 Ga0530510_0065914
588 Ga0530510_0081846
589 Ga0530510_0084055
590 Ga0530510_0174568
591 Ga0530510_0216278
592 Ga0530510_0222132

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14748

P5CR_dimer

Pyrroline-5-carboxylate reductase dimerisation

194

298

0.97

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

36

131

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dkg-assembly1.cif.gz_B structure of pycr1 thr171met variant complexed with nadh 0.9611 9 277
5uaw-assembly1.cif.gz_B structure of apo human pycr-1 crystallized in space group p21212 0.9574 10 278
5uax-assembly1.cif.gz_C structure of apo human pycr-1 crystallized in space group c2 0.953 9 275
6xp0-assembly1.cif.gz_A-2 structure of human pycr1 complexed with n-formyl l-proline 0.9509 10 277
2rcy-assembly1.cif.gz_E-2 crystal structure of plasmodium falciparum pyrroline carboxylate reductase (mal13p1.284) with nadp bound 0.9502 14 275
ID Description Score Start End Superfamily
5uaxB02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.9771 177 274 1.10.3730.10
5uaxC02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.9771 177 274 1.10.3730.10
5uauB02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.9768 177 277 1.10.3730.10
5uauC02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.9765 177 277 1.10.3730.10
2izzC02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.976 177 277 1.10.3730.10
ID Description Score Start End GO Terms
AF-A0A3B9MJV7-F1-model_v4 Pyrroline-5-carboxylate reductase 0.9849 93 278 GO:0004735
GO:0055129
AF-A0A367QR95-F1-model_v4 Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2) (PCA reductase) 0.9815 8 277 GO:0004735
GO:0005737
GO:0055129
AF-A0A3D5CPJ0-F1-model_v4 Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2) (PCA reductase) 0.9799 8 277 GO:0004735
GO:0005737
GO:0055129
AF-A0A3D0CWX0-F1-model_v4 Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2) (PCA reductase) 0.9791 8 276 GO:0004735
GO:0005737
GO:0055129
AF-A0A353DPY6-F1-model_v4 Pyrroline-5-carboxylate reductase 0.9784 169 274 GO:0003735
GO:0004735
GO:0005840
GO:0006412
GO:0016020
GO:0055129

Map