F392798

General Info

Members Datasets Scaffolds Average Seq Length
295 212 590 177

Family's Representative Sequence

Representative Sequence 3300046454|Ga0495592_0159039|Ga0495592_0159039_521_1111
Length 196
Sequence MPPRAASSTDPAQPFNARIPMTTRLQYGTAAKFFHWFIVALLAVQYPIGWFMPDIHPGMTPGAGMIFHLSIGLTILALTVLRLAWRLTHPVAPESSLPAWQRLSSEAVHWLLYALVLATTVSGWLFASYRGWSVSYFYLVPLPMLTSGNAAAGRAIDGFHQAMELALLVTIGIHIAAALAHIFVYRDRVMQRMLPG

Samples

Sample ID Description Type Environment
1 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
26 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
27 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
28 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
29 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
42 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
44 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
46 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
66 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
67 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
68 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
71 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
72 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
73 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
74 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
77 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
78 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
79 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
82 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
83 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
84 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
85 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
86 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
87 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
88 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
89 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
90 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
91 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
92 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
93 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
94 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
103 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
104 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
105 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
110 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
115 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
118 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
119 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
120 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
121 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
122 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
129 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
130 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
131 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
132 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
133 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
134 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
135 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
136 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
137 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
138 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
139 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
140 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
141 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
142 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
152 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
153 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
154 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
155 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
156 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
157 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
160 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
161 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
162 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
170 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
173 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
174 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
175 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
176 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
177 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
178 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
179 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
180 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
181 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
182 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
183 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
184 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
185 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
186 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
187 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
188 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
189 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
190 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
191 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
192 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
193 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
194 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
195 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
196 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
197 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
198 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
199 2643221651 Afipia sp. Root123D2 Isolate Unclassified
200 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
201 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
202 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
203 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
204 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
205 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
206 2906610324
207 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
208 2922425934
209 3005710791 Bradyrhizobium genosp. B BDV5040 Isolate Unclassified
210 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
211 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
212 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.88
Metatranscriptomes 0
Isolates 5.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.32
Nodule 4.41
Rhizoplane 4.75
Rhizosphere 56.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495592_0159039 3300046454 Bacteria 1556
2 rootH1_10280217 3300003323 Bacteria 1150
3 Ga0055543_1013657 3300004625 Bacteria 1600
4 Ga0065165_1000785 3300005262 Bacteria 42533
5 Ga0070658_10531514 3300005327 Bacteria 1017
6 Ga0070683_101073286 3300005329 Bacteria 773
7 Ga0070674_100388164 3300005356 Bacteria 1138
8 Ga0070714_100004681 3300005435 Bacteria 10339
9 Ga0070713_100059579 3300005436 Bacteria 3189
10 Ga0070713_100362549 3300005436 Bacteria 1347
11 Ga0070713_101086580 3300005436 Bacteria 773
12 Ga0070710_10003057 3300005437 Bacteria 7954
13 Ga0070710_10334801 3300005437 Bacteria 997
14 Ga0070711_100008535 3300005439 Bacteria 6279
15 Ga0070707_101122988 3300005468 Bacteria 752
16 Ga0070697_100050642 3300005536 Bacteria 3372
17 Ga0068855_100986138 3300005563 Bacteria 886
18 Ga0068854_100062080 3300005578 Bacteria 2708
19 Ga0068856_100001216 3300005614 Bacteria 26989
20 Ga0068852_100038109 3300005616 Bacteria 4037
21 Ga0068852_100198466 3300005616 Bacteria 1898
22 Ga0068863_100282825 3300005841 Bacteria 1607
23 Ga0068860_100882797 3300005843 Bacteria 910
24 Ga0070716_100007921 3300006173 Bacteria 5259
25 Ga0070712_100018409 3300006175 Bacteria 4537
26 Ga0075367_10197949 3300006178 Bacteria 1255
27 Ga0097621_100530654 3300006237 Bacteria 1069
28 Ga0097620_100262130 3300006931 Bacteria 1820
29 Ga0099825_1030503 3300006941 Bacteria 2380
30 Ga0099824_1003568 3300006942 Bacteria 22720
31 Ga0099822_1020142 3300006943 Bacteria 6673
32 Ga0099794_10043117 3300007265 Bacteria 2153
33 Ga0099794_10127249 3300007265 Bacteria 1285
34 Ga0099795_10015685 3300007788 Bacteria 2380
35 Ga0099795_10056103 3300007788 Bacteria 1448
36 Ga0105240_10036040 3300009093 Bacteria 6370
37 Ga0105245_10600439 3300009098 Bacteria 1127
38 Ga0105247_10012446 3300009101 Bacteria 5109
39 Ga0105247_10064857 3300009101 Bacteria 2270
40 Ga0105243_10116381 3300009148 Bacteria 2246
41 Ga0105241_10069884 3300009174 Bacteria 2723
42 Ga0105237_10009221 3300009545 Bacteria 10589
43 Ga0105237_10036983 3300009545 Bacteria 4936
44 Ga0105237_10046660 3300009545 Bacteria 4357
45 Ga0105237_10162803 3300009545 Bacteria 2230
46 Ga0105249_10144480 3300009553 Bacteria 2284
47 Ga0099796_10011554 3300010159 Bacteria 2467
48 Ga0099796_10227610 3300010159 Bacteria 766
49 Ga0105239_11780180 3300010375 Bacteria 714
50 Ga0157376_10958619 3300014969 Bacteria 876
51 Ga0213876_10001019 3300021384 Bacteria 18168
52 Ga0213876_10083583 3300021384 Bacteria 1689
53 Ga0213875_10444400 3300021388 Bacteria 620
54 Ga0209148_1001229 3300025254 Bacteria 14397
55 Ga0209233_1002653 3300025261 Bacteria 6482
56 Ga0209233_1003538 3300025261 Bacteria 5491
57 Ga0209233_1038503 3300025261 Bacteria 1054
58 Ga0209455_1001113 3300025272 Bacteria 13163
59 Ga0209455_1003686 3300025272 Bacteria 5304
60 Ga0209758_1006330 3300025297 Bacteria 8580
61 Ga0207692_10002834 3300025898 Bacteria 6699
62 Ga0207710_10016733 3300025900 Bacteria 3104
63 Ga0207710_10066545 3300025900 Bacteria 1644
64 Ga0207699_10002223 3300025906 Bacteria 9155
65 Ga0207705_10390017 3300025909 Bacteria 1076
66 Ga0207695_10000059 3300025913 Bacteria 363920
67 Ga0207671_10006959 3300025914 Bacteria 9946
68 Ga0207671_10064831 3300025914 Bacteria 2716
69 Ga0207693_10053992 3300025915 Bacteria 3152
70 Ga0207693_10206968 3300025915 Bacteria 1542
71 Ga0207663_10012234 3300025916 Bacteria 4633
72 Ga0207687_10402343 3300025927 Bacteria 1126
73 Ga0207700_10041762 3300025928 Bacteria 3358
74 Ga0207700_10180613 3300025928 Bacteria 1767
75 Ga0207700_11330853 3300025928 Bacteria 640
76 Ga0207664_10009480 3300025929 Bacteria 6835
77 Ga0207664_10147528 3300025929 Bacteria 1996
78 Ga0207665_10061911 3300025939 Bacteria 2538
79 Ga0207665_10659013 3300025939 Bacteria 821
80 Ga0207667_10593838 3300025949 Bacteria 1117
81 Ga0207712_10672262 3300025961 Bacteria 902
82 Ga0207640_10116917 3300025981 Bacteria 1902
83 Ga0207678_10043427 3300026067 Bacteria 3890
84 Ga0207702_10001100 3300026078 Bacteria 27642
85 Ga0207676_10750982 3300026095 Bacteria 949
86 Ga0207698_10041813 3300026142 Bacteria 3419
87 Ga0209589_1000015 3300027357 Bacteria 225913
88 Ga0209489_100015 3300027361 Bacteria 225913
89 Ga0209700_100025 3300027363 Bacteria 225913
90 Ga0209588_1079105 3300027671 Bacteria 1062
91 Ga0268264_10549170 3300028381 Bacteria 1133
92 Ga0265319_1011747 3300028563 Bacteria 3566
93 Ga0265334_10004606 3300028573 Bacteria 6097
94 Ga0265318_10013883 3300028577 Bacteria 3391
95 Ga0265323_10005398 3300028653 Bacteria 5432
96 Ga0265336_10000394 3300028666 Bacteria 27433
97 Ga0265338_10001172 3300028800 Bacteria 43270
98 Ga0265324_10007823 3300029957 Bacteria 4295
99 Ga0265332_10110974 3300031238 Bacteria 1155
100 Ga0265340_10021786 3300031247 Bacteria 3283
101 Ga0265339_10109916 3300031249 Bacteria 1427
102 Ga0265339_10203038 3300031249 Bacteria 977
103 Ga0265316_10318402 3300031344 Bacteria 1130
104 Ga0307509_10150891 3300031507 Bacteria 2239
105 Ga0307508_10000715 3300031616 Bacteria 39415
106 Ga0307508_10080513 3300031616 Bacteria 2838
107 Ga0307508_10146587 3300031616 Bacteria 1964
108 Ga0265314_10042686 3300031711 Bacteria 3232
109 Ga0265342_10030908 3300031712 Bacteria 3315
110 Ga0265342_10037909 3300031712 Bacteria 2937
111 Ga0307516_10057129 3300031730 Bacteria 3802
112 Ga0307507_10247617 3300033179 Bacteria 1156
113 Ga0307510_10282468 3300033180 Bacteria 1130
114 Ga0373926_0219767 3300035083 Bacteria 733
115 Ga0373934_0072300 3300035086 Bacteria 1381
116 Ga0373936_0191773 3300035113 Bacteria 900
117 Ga0373945_0077689 3300035116 Bacteria 1267
118 Ga0373943_0134614 3300035170 Bacteria 1326
119 Ga0373946_0010087 3300035171 Bacteria 3493
120 Ga0373935_0066751 3300035692 Bacteria 2312
121 Ga0373935_0894755 3300035692 Bacteria 657
122 Ga0373927_0006414 3300035695 Bacteria 8017
123 Ga0373927_0015524 3300035695 Bacteria 5031
124 Ga0373925_0029117 3300037068 Bacteria 4051
125 Ga0373925_0111295 3300037068 Bacteria 2115
126 Ga0373925_0450880 3300037068 Bacteria 1053
127 Ga0395900_0042572 3300037418 Bacteria 4680
128 Ga0395898_0169370 3300037466 Bacteria 2088
129 Ga0436364_1538075 3300037853 Bacteria 669
130 Ga0395901_0193434 3300038443 Bacteria 2133
131 Ga0436365_0368965 3300039437 Bacteria 1621
132 Ga0436365_1205316 3300039437 Bacteria 1711
133 Ga0436365_1829992 3300039437 Bacteria 23552
134 Ga0436361_0885414 3300039447 Bacteria 723
135 Ga0436362_0286023 3300039453 Bacteria 3056
136 Ga0451800_0067866 3300041459 Bacteria 942
137 Ga0466969_0027293 3300044656 Bacteria 2924
138 Ga0466966_0000563 3300044684 Bacteria 23663
139 Ga0466961_0000087 3300044693 Bacteria 58547
140 Ga0466963_0004010 3300044694 Bacteria 8511
141 Ga0466964_0379267 3300044706 Bacteria 734
142 Ga0466971_0282126 3300044719 Bacteria 795
143 Ga0466971_0543504 3300044719 Bacteria 576
144 Ga0466957_0053685 3300044842 Bacteria 2458
145 Ga0466959_0000716 3300045049 Bacteria 19360
146 Ga0466967_0279815 3300045976 Bacteria 1600
147 Ga0466967_0320472 3300045976 Bacteria 1495
148 Ga0466967_0993912 3300045976 Bacteria 835
149 Ga0495603_0019984 3300046455 Bacteria 4058
150 Ga0495641_0099744 3300046461 Bacteria 1296
151 Ga0495651_0024752 3300046462 Bacteria 4670
152 Ga0495651_0032987 3300046462 Bacteria 4039
153 Ga0495651_0050310 3300046462 Bacteria 3215
154 Ga0495653_0455369 3300046463 Bacteria 804
155 Ga0495580_0313476 3300046472 Bacteria 1067
156 Ga0495582_0088015 3300046473 Bacteria 1730
157 Ga0495664_0003213 3300046477 Bacteria 8868
158 Ga0495664_0497402 3300046477 Bacteria 728
159 Ga0495594_0657462 3300046499 Bacteria 593
160 Ga0495630_0693804 3300046517 Bacteria 779
161 Ga0495652_0014184 3300046529 Bacteria 7158
162 Ga0495652_0027349 3300046529 Bacteria 5025
163 Ga0495652_0255339 3300046529 Bacteria 1297
164 Ga0495622_0027379 3300046557 Bacteria 2660
165 Ga0495622_0037526 3300046557 Bacteria 2257
166 Ga0495667_0171161 3300046559 Bacteria 1395
167 Ga0495634_0283410 3300046642 Bacteria 1006
168 Ga0495635_0019804 3300046663 Bacteria 4688
169 Ga0495635_0124286 3300046663 Bacteria 1759
170 Ga0495657_0001266 3300046675 Bacteria 21999
171 Ga0495599_0019821 3300046678 Bacteria 4189
172 Ga0495599_0189883 3300046678 Bacteria 1264
173 Ga0495623_0001494 3300046679 Bacteria 15865
174 Ga0495646_0069453 3300046680 Bacteria 2078
175 Ga0495646_0095404 3300046680 Bacteria 1712
176 Ga0495669_0239048 3300046684 Bacteria 872
177 Ga0495624_0167373 3300046690 Bacteria 1341
178 Ga0495600_0020632 3300046809 Bacteria 4213
179 Ga0495604_0000470 3300047317 Bacteria 35601
180 Ga0495604_0047648 3300047317 Bacteria 3337
181 Ga0495674_0008519 3300047319 Bacteria 9761
182 Ga0495674_0108966 3300047319 Bacteria 2350
183 Ga0495676_0039914 3300047321 Bacteria 3881
184 Ga0495676_0540663 3300047321 Bacteria 762
185 Ga0495680_0000546 3300047322 Bacteria 42342
186 Ga0495684_0035426 3300047471 Bacteria 3828
187 Ga0495593_0075436 3300047673 Bacteria 1748
188 Ga0495602_0006281 3300048088 Bacteria 12466
189 Ga0495602_0086653 3300048088 Bacteria 2614
190 Ga0495602_0188035 3300048088 Bacteria 1586
191 Ga0496101_0149809 3300048904 Bacteria 1784
192 Ga0496102_0501248 3300048905 Bacteria 1136
193 Ga0496104_0013573 3300048907 Bacteria 7342
194 Ga0496104_0150730 3300048907 Bacteria 2232
195 Ga0496105_0005035 3300048908 Bacteria 10006
196 Ga0496106_0001945 3300048909 Bacteria 15500
197 Ga0496109_0209210 3300048912 Bacteria 1834
198 Ga0496110_0574401 3300048913 Bacteria 1024
199 Ga0496111_0209108 3300048914 Bacteria 1449
200 Ga0496112_0236460 3300048915 Bacteria 1780
201 Ga0496113_0115052 3300048916 Bacteria 2098
202 Ga0496115_0143379 3300048918 Bacteria 1971
203 Ga0496115_0148377 3300048918 Bacteria 1936
204 Ga0496116_0246341 3300048919 Bacteria 893
205 Ga0496117_0070417 3300048920 Bacteria 2349
206 Ga0496118_0003943 3300048921 Bacteria 18147
207 Ga0496118_0031182 3300048921 Bacteria 4427
208 Ga0496119_0102913 3300048922 Bacteria 1600
209 Ga0496120_0011626 3300048923 Bacteria 6040
210 Ga0496121_0003178 3300048924 Bacteria 23674
211 Ga0496121_0081358 3300048924 Bacteria 2564
212 Ga0496121_0183092 3300048924 Bacteria 1509
213 Ga0496124_0002348 3300048927 Bacteria 24978
214 Ga0496124_0044249 3300048927 Bacteria 3821
215 Ga0496124_0509930 3300048927 Bacteria 804
216 Ga0496125_0028745 3300048928 Bacteria 5012
217 Ga0496125_0041231 3300048928 Bacteria 3950
218 Ga0496125_0134383 3300048928 Bacteria 1733
219 Ga0496126_0017275 3300048929 Bacteria 7189
220 Ga0496126_0022316 3300048929 Bacteria 6162
221 Ga0496126_0116401 3300048929 Bacteria 2323
222 Ga0496126_0133366 3300048929 Bacteria 2144
223 Ga0496126_0223347 3300048929 Bacteria 1581
224 Ga0501032_0002419 3300049569 Bacteria 14568
225 Ga0501034_0411046 3300049571 Bacteria 1275
226 Ga0501038_0000519 3300049574 Bacteria 33842
227 Ga0501039_0017792 3300049575 Bacteria 5452
228 Ga0501043_0012980 3300049579 Bacteria 6511
229 Ga0501047_0346015 3300049581 Bacteria 1324
230 Ga0501044_0047933 3300049823 Bacteria 4418
231 nmdc:mga06z11_139169_c1 3300050494 Bacteria 1370
232 nmdc:mga06z11_531570_c1 3300050494 Bacteria 713
233 Ga0500635_0020203 3300053080 Bacteria 2037
234 Ga0500635_0214910 3300053080 Bacteria 749
235 Ga0495619_0055645 3300053085 Bacteria 2621
236 Ga0500566_0000126 3300053094 Bacteria 39286
237 Ga0500566_0087716 3300053094 Bacteria 1723
238 Ga0500640_068477 3300053095 Bacteria 1526
239 Ga0500572_000014 3300053111 Bacteria 52727
240 Ga0500572_000110 3300053111 Bacteria 27192
241 Ga0500572_000976 3300053111 Bacteria 8666
242 Ga0500595_064249 3300053119 Bacteria 1101
243 Ga0500607_120722 3300053121 Bacteria 1268
244 Ga0500608_010946 3300053122 Bacteria 3917
245 Ga0500608_143460 3300053122 Bacteria 1056
246 Ga0500614_000373 3300053123 Bacteria 11676
247 Ga0500559_0000230 3300053136 Bacteria 44504
248 Ga0500559_0000455 3300053136 Bacteria 29161
249 Ga0500559_0002208 3300053136 Bacteria 10284
250 Ga0500559_0011866 3300053136 Bacteria 3713
251 Ga0500559_0015782 3300053136 Bacteria 3190
252 Ga0500564_048416 3300053138 Bacteria 1948
253 Ga0500573_0018252 3300053140 Bacteria 3997
254 Ga0500585_163184 3300053144 Bacteria 769
255 Ga0500603_002065 3300053150 Bacteria 4440
256 Ga0500603_049713 3300053150 Bacteria 1144
257 Ga0500619_052780 3300053154 Bacteria 1319
258 Ga0500620_015935 3300053155 Bacteria 2136
259 Ga0500624_022591 3300053157 Bacteria 1025
260 Ga0500630_006930 3300053159 Bacteria 5556
261 Ga0500638_087113 3300053162 Bacteria 1475
262 Ga0500639_000039 3300053163 Bacteria 65182
263 Ga0500639_165125 3300053163 Bacteria 1001
264 Ga0500636_0000016 3300053177 Bacteria 123469
265 Ga0500636_0019099 3300053177 Bacteria 4056
266 Ga0500636_0051388 3300053177 Bacteria 2423
267 Ga0500636_0146228 3300053177 Bacteria 1302
268 Ga0500636_0250257 3300053177 Bacteria 904
269 Ga0500636_0442319 3300053177 Bacteria 590
270 Ga0500637_0039982 3300053178 Bacteria 2647
271 Ga0500576_136868 3300053725 Bacteria 938
272 Ga0500596_001190 3300053735 Bacteria 5254
273 Ga0500596_006529 3300053735 Bacteria 1966
274 Ga0500601_000237 3300053737 Bacteria 10803
275 Ga0500601_008341 3300053737 Bacteria 1151
276 Ga0500601_029467 3300053737 Bacteria 649
277 Ga0500661_006813 3300055283 Bacteria 2124
278 Ga0500661_057030 3300055283 Bacteria 702
279 2513638850 2513237094 Bacteria 8789602
280 2513891679 2513237141 Bacteria 8496279
281 2528856880 2528768022 Bacteria 10457665
282 2644291677 2643221651 Bacteria 4798932
283 2844321554 2844315083 Bacteria 8138177
284 2881672337 2881665667 Bacteria 8175609
285 2885377138 2885374607 Bacteria 8927485
286 2885417526 2885409591 Bacteria 9235467
287 2903727872 2903727486 Bacteria 8281579
288 2906602644 2906602504 Bacteria 8295279
289 2906614412
290 2908746761 2908739725 Bacteria 8628932
291 2922426242
292 3005717645 3005710791 Bacteria 7622528
293 3005724704 3005718088 Bacteria 8283608
294 8019561733 8019555841 Bacteria 9642137
295 8019571803 8019565922 Bacteria 9639779
296 Ga0495592_0159039
297 rootH1_10280217
298 Ga0055543_1013657
299 Ga0065165_1000785
300 Ga0070658_10531514
301 Ga0070683_101073286
302 Ga0070674_100388164
303 Ga0070714_100004681
304 Ga0070713_100059579
305 Ga0070713_100362549
306 Ga0070713_101086580
307 Ga0070710_10003057
308 Ga0070710_10334801
309 Ga0070711_100008535
310 Ga0070707_101122988
311 Ga0070697_100050642
312 Ga0068855_100986138
313 Ga0068854_100062080
314 Ga0068856_100001216
315 Ga0068852_100038109
316 Ga0068852_100198466
317 Ga0068863_100282825
318 Ga0068860_100882797
319 Ga0070716_100007921
320 Ga0070712_100018409
321 Ga0075367_10197949
322 Ga0097621_100530654
323 Ga0097620_100262130
324 Ga0099825_1030503
325 Ga0099824_1003568
326 Ga0099822_1020142
327 Ga0099794_10043117
328 Ga0099794_10127249
329 Ga0099795_10015685
330 Ga0099795_10056103
331 Ga0105240_10036040
332 Ga0105245_10600439
333 Ga0105247_10012446
334 Ga0105247_10064857
335 Ga0105243_10116381
336 Ga0105241_10069884
337 Ga0105237_10009221
338 Ga0105237_10036983
339 Ga0105237_10046660
340 Ga0105237_10162803
341 Ga0105249_10144480
342 Ga0099796_10011554
343 Ga0099796_10227610
344 Ga0105239_11780180
345 Ga0157376_10958619
346 Ga0213876_10001019
347 Ga0213876_10083583
348 Ga0213875_10444400
349 Ga0209148_1001229
350 Ga0209233_1002653
351 Ga0209233_1003538
352 Ga0209233_1038503
353 Ga0209455_1001113
354 Ga0209455_1003686
355 Ga0209758_1006330
356 Ga0207692_10002834
357 Ga0207710_10016733
358 Ga0207710_10066545
359 Ga0207699_10002223
360 Ga0207705_10390017
361 Ga0207695_10000059
362 Ga0207671_10006959
363 Ga0207671_10064831
364 Ga0207693_10053992
365 Ga0207693_10206968
366 Ga0207663_10012234
367 Ga0207687_10402343
368 Ga0207700_10041762
369 Ga0207700_10180613
370 Ga0207700_11330853
371 Ga0207664_10009480
372 Ga0207664_10147528
373 Ga0207665_10061911
374 Ga0207665_10659013
375 Ga0207667_10593838
376 Ga0207712_10672262
377 Ga0207640_10116917
378 Ga0207678_10043427
379 Ga0207702_10001100
380 Ga0207676_10750982
381 Ga0207698_10041813
382 Ga0209589_1000015
383 Ga0209489_100015
384 Ga0209700_100025
385 Ga0209588_1079105
386 Ga0268264_10549170
387 Ga0265319_1011747
388 Ga0265334_10004606
389 Ga0265318_10013883
390 Ga0265323_10005398
391 Ga0265336_10000394
392 Ga0265338_10001172
393 Ga0265324_10007823
394 Ga0265332_10110974
395 Ga0265340_10021786
396 Ga0265339_10109916
397 Ga0265339_10203038
398 Ga0265316_10318402
399 Ga0307509_10150891
400 Ga0307508_10000715
401 Ga0307508_10080513
402 Ga0307508_10146587
403 Ga0265314_10042686
404 Ga0265342_10030908
405 Ga0265342_10037909
406 Ga0307516_10057129
407 Ga0307507_10247617
408 Ga0307510_10282468
409 Ga0373926_0219767
410 Ga0373934_0072300
411 Ga0373936_0191773
412 Ga0373945_0077689
413 Ga0373943_0134614
414 Ga0373946_0010087
415 Ga0373935_0066751
416 Ga0373935_0894755
417 Ga0373927_0006414
418 Ga0373927_0015524
419 Ga0373925_0029117
420 Ga0373925_0111295
421 Ga0373925_0450880
422 Ga0395900_0042572
423 Ga0395898_0169370
424 Ga0436364_1538075
425 Ga0395901_0193434
426 Ga0436365_0368965
427 Ga0436365_1205316
428 Ga0436365_1829992
429 Ga0436361_0885414
430 Ga0436362_0286023
431 Ga0451800_0067866
432 Ga0466969_0027293
433 Ga0466966_0000563
434 Ga0466961_0000087
435 Ga0466963_0004010
436 Ga0466964_0379267
437 Ga0466971_0282126
438 Ga0466971_0543504
439 Ga0466957_0053685
440 Ga0466959_0000716
441 Ga0466967_0279815
442 Ga0466967_0320472
443 Ga0466967_0993912
444 Ga0495603_0019984
445 Ga0495641_0099744
446 Ga0495651_0024752
447 Ga0495651_0032987
448 Ga0495651_0050310
449 Ga0495653_0455369
450 Ga0495580_0313476
451 Ga0495582_0088015
452 Ga0495664_0003213
453 Ga0495664_0497402
454 Ga0495594_0657462
455 Ga0495630_0693804
456 Ga0495652_0014184
457 Ga0495652_0027349
458 Ga0495652_0255339
459 Ga0495622_0027379
460 Ga0495622_0037526
461 Ga0495667_0171161
462 Ga0495634_0283410
463 Ga0495635_0019804
464 Ga0495635_0124286
465 Ga0495657_0001266
466 Ga0495599_0019821
467 Ga0495599_0189883
468 Ga0495623_0001494
469 Ga0495646_0069453
470 Ga0495646_0095404
471 Ga0495669_0239048
472 Ga0495624_0167373
473 Ga0495600_0020632
474 Ga0495604_0000470
475 Ga0495604_0047648
476 Ga0495674_0008519
477 Ga0495674_0108966
478 Ga0495676_0039914
479 Ga0495676_0540663
480 Ga0495680_0000546
481 Ga0495684_0035426
482 Ga0495593_0075436
483 Ga0495602_0006281
484 Ga0495602_0086653
485 Ga0495602_0188035
486 Ga0496101_0149809
487 Ga0496102_0501248
488 Ga0496104_0013573
489 Ga0496104_0150730
490 Ga0496105_0005035
491 Ga0496106_0001945
492 Ga0496109_0209210
493 Ga0496110_0574401
494 Ga0496111_0209108
495 Ga0496112_0236460
496 Ga0496113_0115052
497 Ga0496115_0143379
498 Ga0496115_0148377
499 Ga0496116_0246341
500 Ga0496117_0070417
501 Ga0496118_0003943
502 Ga0496118_0031182
503 Ga0496119_0102913
504 Ga0496120_0011626
505 Ga0496121_0003178
506 Ga0496121_0081358
507 Ga0496121_0183092
508 Ga0496124_0002348
509 Ga0496124_0044249
510 Ga0496124_0509930
511 Ga0496125_0028745
512 Ga0496125_0041231
513 Ga0496125_0134383
514 Ga0496126_0017275
515 Ga0496126_0022316
516 Ga0496126_0116401
517 Ga0496126_0133366
518 Ga0496126_0223347
519 Ga0501032_0002419
520 Ga0501034_0411046
521 Ga0501038_0000519
522 Ga0501039_0017792
523 Ga0501043_0012980
524 Ga0501047_0346015
525 Ga0501044_0047933
526 nmdc:mga06z11_139169_c1
527 nmdc:mga06z11_531570_c1
528 Ga0500635_0020203
529 Ga0500635_0214910
530 Ga0495619_0055645
531 Ga0500566_0000126
532 Ga0500566_0087716
533 Ga0500640_068477
534 Ga0500572_000014
535 Ga0500572_000110
536 Ga0500572_000976
537 Ga0500595_064249
538 Ga0500607_120722
539 Ga0500608_010946
540 Ga0500608_143460
541 Ga0500614_000373
542 Ga0500559_0000230
543 Ga0500559_0000455
544 Ga0500559_0002208
545 Ga0500559_0011866
546 Ga0500559_0015782
547 Ga0500564_048416
548 Ga0500573_0018252
549 Ga0500585_163184
550 Ga0500603_002065
551 Ga0500603_049713
552 Ga0500619_052780
553 Ga0500620_015935
554 Ga0500624_022591
555 Ga0500630_006930
556 Ga0500638_087113
557 Ga0500639_000039
558 Ga0500639_165125
559 Ga0500636_0000016
560 Ga0500636_0019099
561 Ga0500636_0051388
562 Ga0500636_0146228
563 Ga0500636_0250257
564 Ga0500636_0442319
565 Ga0500637_0039982
566 Ga0500576_136868
567 Ga0500596_001190
568 Ga0500596_006529
569 Ga0500601_000237
570 Ga0500601_008341
571 Ga0500601_029467
572 Ga0500661_006813
573 Ga0500661_057030
574 2513638850
575 2513891679
576 2528856880
577 2644291677
578 2844321554
579 2881672337
580 2885377138
581 2885417526
582 2903727872
583 2906602644
584 2906614412
585 2908746761
586 2922426242
587 3005717645
588 3005724704
589 8019561733
590 8019571803

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01292

Ni_hydr_CYTB

Prokaryotic cytochrome b561

26

196

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5oc0-assembly1.cif.gz_A structure of e. coli superoxide oxidase 0.8256 6 176
5oc0-assembly1.cif.gz_A structure of e. coli superoxide oxidase 0.8039 6 176
4gd3-assembly1.cif.gz_A structure of e. coli hydrogenase-1 in complex with cytochrome b 0.6182 8 161
6g94-assembly1.cif.gz_A structure of e. coli hydrogenase-1 c19g variant in complex with cytochrome b 0.5868 12 161
4gd3-assembly1.cif.gz_A structure of e. coli hydrogenase-1 in complex with cytochrome b 0.5461 8 161
ID Description Score Start End Superfamily
af_P76345_3_174_1.20.950.20 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.8536 10 176 1.20.950.20
af_P76345_3_174_1.20.950.20 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.8258 10 176 1.20.950.20
af_P0ABE5_4_173_1.20.950.20 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.8153 11 176 1.20.950.20
af_P0ABE5_4_173_1.20.950.20 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.7891 11 176 1.20.950.20
af_P0AAM1_1_207_1.20.950.20 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.6214 8 161 1.20.950.20
ID Description Score Start End GO Terms
AF-A0A0Q5ZRH6-F1-model_v4 Cytochrome B 0.9406 1 175 GO:0005886
GO:0009055
GO:0020037
GO:0022904
GO:0046872
AF-A0A1H1ZYY3-F1-model_v4 Cytochrome b561 0.9397 1 176 GO:0005886
GO:0009055
GO:0020037
GO:0022904
GO:0046872
AF-A0A149U1N0-F1-model_v4 deleted 0.9397 81 174
AF-A0A1G0DSZ9-F1-model_v4 deleted 0.9385 46 175
AF-A0A3S0EIZ6-F1-model_v4 Cytochrome b 0.9356 77 176 GO:0005886
GO:0009055
GO:0020037
GO:0022904
GO:0046872

Map