F392562

General Info

Members Datasets Scaffolds Average Seq Length
295 192 590 256

Family's Representative Sequence

Representative Sequence 3300005618|Ga0068864_100358958|Ga0068864_1003589582
Length 297
Sequence MAAPLPFDRVATDGEHACSRDIRLVRGPAAYFQALQAANRGNVRTVILAGGTGSRLSEETVDKPKPMVEIGSHPILWHIMKIYATFGYCDFVIPLGYKGEVIKRYFADYASLAGDLTVEIANGTVRPHSTGAEDWTVRLFDTGLNTATGGRMRRVREQLDSTFMMTFGDGVSDVDINDLIRFHKSHGKLATLTAVRPPARFGHVELDGDQVDVFSEKPQAREGWINGGFFVLEPGVIDYIERDDVYFQKEPLERLAEEGQLMAYRHESFWQCMDTLRDKVFLEELWDSGSAPWKVWD

Samples

Sample ID Description Type Environment
1 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
43 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
44 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
74 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
76 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
77 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
78 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
79 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
80 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
110 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
111 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
112 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
113 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
114 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
115 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
116 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
117 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
118 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
119 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
120 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
121 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
122 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
123 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
124 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
129 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
130 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
131 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
132 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
133 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
134 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
135 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
136 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
137 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
138 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
141 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
142 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
143 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
144 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
145 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
146 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
147 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
148 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
149 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
150 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
151 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
152 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
157 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
158 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
159 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
170 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
171 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
172 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
173 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
174 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
175 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
176 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
177 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
178 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
180 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
181 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
182 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
183 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
184 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
185 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
186 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
187 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
188 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
189 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
190 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
191 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
192 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.98
Metatranscriptomes 0.68
Isolates 0.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.71
Nodule 0
Rhizoplane 4.75
Rhizosphere 87.12
Stem 0
Stem Tuber 0
Unclassified 2.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068864_100358958 3300005618 Bacteria 1377
2 JGI24751J29686_10003775 3300002459 Bacteria 3057
3 JGI25406J46586_10000229 3300003203 Bacteria 24755
4 rootL2_10125795 3300003322 Bacteria 6522
5 Ga0070658_10093285 3300005327 Bacteria 2483
6 Ga0070658_10330330 3300005327 Bacteria 1303
7 Ga0070670_100019963 3300005331 Bacteria 5752
8 Ga0068869_100001174 3300005334 Bacteria 15365
9 Ga0070680_100024222 3300005336 Bacteria 4845
10 Ga0070689_100000243 3300005340 Bacteria 31995
11 Ga0070689_100050154 3300005340 Bacteria 3224
12 Ga0070668_100236315 3300005347 Bacteria 1512
13 Ga0070669_100154532 3300005353 Bacteria 1778
14 Ga0070675_100122173 3300005354 Bacteria 2213
15 Ga0070674_100063943 3300005356 Bacteria 2577
16 Ga0070673_100058132 3300005364 Bacteria 3057
17 Ga0070673_100352210 3300005364 Bacteria 1307
18 Ga0070673_100387366 3300005364 Bacteria 1247
19 Ga0070688_100000065 3300005365 Bacteria 52500
20 Ga0070688_100016013 3300005365 Bacteria 4277
21 Ga0070705_100090839 3300005440 Bacteria 1902
22 Ga0070681_10284480 3300005458 Unclassified 1564
23 Ga0068867_100004378 3300005459 Bacteria 9942
24 Ga0070706_100003893 3300005467 Bacteria 14558
25 Ga0070706_100106117 3300005467 Bacteria 2613
26 Ga0070707_100001617 3300005468 Bacteria 21832
27 Ga0070698_100000290 3300005471 Bacteria 51183
28 Ga0070699_100000876 3300005518 Bacteria 28011
29 Ga0070697_100025987 3300005536 Bacteria 4672
30 Ga0070697_100136388 3300005536 Bacteria 2061
31 Ga0068853_100887101 3300005539 Bacteria 856
32 Ga0070686_100448863 3300005544 Bacteria 991
33 Ga0070696_100016724 3300005546 Bacteria 4946
34 Ga0070693_100000653 3300005547 Bacteria 15287
35 Ga0070665_100048458 3300005548 Bacteria 4266
36 Ga0068855_100001382 3300005563 Bacteria 30060
37 Ga0068857_100008322 3300005577 Bacteria 8962
38 Ga0068857_100013889 3300005577 Bacteria 7012
39 Ga0068854_100262514 3300005578 Bacteria 1383
40 Ga0068854_100385595 3300005578 Bacteria 1156
41 Ga0070702_100004055 3300005615 Bacteria 6638
42 Ga0068859_100005618 3300005617 Bacteria 12782
43 Ga0068859_100350304 3300005617 Bacteria 1571
44 Ga0068859_100695430 3300005617 Bacteria 1108
45 Ga0068866_10000282 3300005718 Bacteria 24368
46 Ga0068866_10096738 3300005718 Bacteria 1620
47 Ga0068861_100456079 3300005719 Bacteria 1147
48 Ga0068858_100027354 3300005842 Bacteria 5299
49 Ga0068860_100091851 3300005843 Bacteria 2892
50 Ga0068860_100153734 3300005843 Unclassified 2217
51 Ga0068862_100037152 3300005844 Bacteria 4127
52 Ga0081455_10024541 3300005937 Bacteria 5581
53 Ga0081539_10000034 3300005985 Bacteria 307597
54 Ga0081539_10000469 3300005985 Bacteria 85316
55 Ga0081539_10009464 3300005985 Bacteria 8137
56 Ga0081539_10032251 3300005985 Bacteria 3211
57 Ga0075365_10035393 3300006038 Bacteria 3230
58 Ga0075368_10018678 3300006042 Bacteria 2608
59 Ga0075363_100039196 3300006048 Bacteria 2493
60 Ga0075364_10294300 3300006051 Bacteria 1105
61 Ga0075367_10126763 3300006178 Bacteria 1576
62 Ga0068871_100420463 3300006358 Bacteria 1193
63 Ga0075428_100023194 3300006844 Bacteria 6864
64 Ga0075428_100106947 3300006844 Bacteria 3049
65 Ga0075428_100166228 3300006844 Bacteria 2393
66 Ga0075430_100000001 3300006846 Bacteria 185803
67 Ga0075430_100007462 3300006846 Bacteria 9229
68 Ga0075430_100120303 3300006846 Bacteria 2189
69 Ga0075431_100010987 3300006847 Bacteria 9114
70 Ga0075431_100150919 3300006847 Bacteria 2393
71 Ga0075433_10037220 3300006852 Bacteria 4196
72 Ga0075433_10063305 3300006852 Bacteria 3240
73 Ga0075434_100093011 3300006871 Bacteria 3018
74 Ga0075434_100143684 3300006871 Bacteria 2406
75 Ga0075429_100000307 3300006880 Bacteria 34707
76 Ga0075429_100124643 3300006880 Bacteria 2253
77 Ga0075429_100479433 3300006880 Bacteria 1090
78 Ga0097620_100005618 3300006931 Bacteria 12782
79 Ga0097620_100350290 3300006931 Bacteria 1571
80 Ga0097620_100695431 3300006931 Bacteria 1108
81 Ga0099794_10002941 3300007265 Bacteria 6418
82 Ga0105240_10003492 3300009093 Bacteria 24374
83 Ga0105240_10413741 3300009093 Bacteria 1516
84 Ga0111539_10099596 3300009094 Bacteria 3413
85 Ga0105245_10310257 3300009098 Bacteria 1551
86 Ga0105245_10430756 3300009098 Bacteria 1324
87 Ga0105245_10597387 3300009098 Bacteria 1130
88 Ga0105247_10298328 3300009101 Bacteria 1117
89 Ga0114129_10010842 3300009147 Bacteria 12985
90 Ga0114129_10097767 3300009147 Bacteria 4064
91 Ga0114129_10147709 3300009147 Bacteria 3219
92 Ga0114129_10364662 3300009147 Bacteria 1911
93 Ga0105243_10050322 3300009148 Bacteria 3291
94 Ga0105242_10000802 3300009176 Bacteria 24374
95 Ga0105242_10004271 3300009176 Bacteria 11141
96 Ga0105242_10233849 3300009176 Bacteria 1648
97 Ga0105248_10017878 3300009177 Bacteria 7824
98 Ga0105248_10045196 3300009177 Bacteria 4939
99 Ga0105248_10276556 3300009177 Bacteria 1890
100 Ga0105238_10132041 3300009551 Bacteria 2475
101 Ga0105249_10002084 3300009553 Bacteria 17347
102 Ga0105249_10009391 3300009553 Bacteria 8558
103 Ga0105249_10037718 3300009553 Bacteria 4385
104 Ga0105249_10054915 3300009553 Unclassified 3642
105 Ga0105249_10151302 3300009553 Bacteria 2234
106 Ga0105239_10002304 3300010375 Bacteria 24374
107 Ga0105239_10618270 3300010375 Bacteria 1236
108 Ga0105246_10039241 3300011119 Bacteria 3189
109 Ga0157371_10069803 3300013102 Bacteria 2488
110 Ga0157374_10511443 3300013296 Bacteria 1206
111 Ga0157378_10132082 3300013297 Bacteria 2312
112 Ga0157378_10643497 3300013297 Bacteria 1075
113 Ga0157378_11114628 3300013297 Bacteria 827
114 Ga0157375_10027286 3300013308 Bacteria 5336
115 Ga0157375_10034516 3300013308 Bacteria 4821
116 Ga0157375_10506894 3300013308 Bacteria 1371
117 Ga0163163_10091486 3300014325 Bacteria 3057
118 Ga0163163_10136317 3300014325 Bacteria 2496
119 Ga0163163_10462592 3300014325 Bacteria 1329
120 Ga0163163_10739551 3300014325 Bacteria 1047
121 Ga0157379_10111274 3300014968 Bacteria 2460
122 Ga0157379_10370642 3300014968 Bacteria 1313
123 Ga0163161_10109277 3300017792 Bacteria 2065
124 Ga0206351_10060624 3300020077 Bacteria 2499
125 Ga0213873_10003422 3300021358 Bacteria 2856
126 Ga0213874_10004615 3300021377 Bacteria 3163
127 Ga0213876_10013487 3300021384 Bacteria 4338
128 Ga0213875_10037926 3300021388 Bacteria 2270
129 Ga0209233_1011256 3300025261 Bacteria 2641
130 Ga0207642_10000087 3300025899 Bacteria 24354
131 Ga0207642_10028353 3300025899 Bacteria 2305
132 Ga0207688_10041908 3300025901 Bacteria 2547
133 Ga0207645_10138190 3300025907 Bacteria 1587
134 Ga0207705_10039648 3300025909 Bacteria 3376
135 Ga0207705_10072252 3300025909 Bacteria 2502
136 Ga0207705_10461277 3300025909 Bacteria 985
137 Ga0207684_10008814 3300025910 Bacteria 8955
138 Ga0207695_10007095 3300025913 Bacteria 14350
139 Ga0207695_10119486 3300025913 Bacteria 2606
140 Ga0207660_10378340 3300025917 Bacteria 1138
141 Ga0207657_10189435 3300025919 Bacteria 1660
142 Ga0207646_10011520 3300025922 Bacteria 8554
143 Ga0207687_10285000 3300025927 Bacteria 1325
144 Ga0207686_10000545 3300025934 Bacteria 24383
145 Ga0207686_10186290 3300025934 Bacteria 1476
146 Ga0207670_10000018 3300025936 Bacteria 158699
147 Ga0207670_10031960 3300025936 Bacteria 3379
148 Ga0207704_10389118 3300025938 Bacteria 1097
149 Ga0207691_10151328 3300025940 Bacteria 2040
150 Ga0207691_10229274 3300025940 Bacteria 1609
151 Ga0207711_10437100 3300025941 Bacteria 1218
152 Ga0207711_10494367 3300025941 Bacteria 1140
153 Ga0207689_10003871 3300025942 Bacteria 13633
154 Ga0207661_10238511 3300025944 Bacteria 1613
155 Ga0207651_10103172 3300025960 Bacteria 2122
156 Ga0207651_10284639 3300025960 Bacteria 1368
157 Ga0207712_10022784 3300025961 Bacteria 4128
158 Ga0207712_10026696 3300025961 Bacteria 3850
159 Ga0207712_10034594 3300025961 Bacteria 3424
160 Ga0207712_10037542 3300025961 Unclassified 3306
161 Ga0207640_10344030 3300025981 Bacteria 1196
162 Ga0207677_10716982 3300026023 Bacteria 889
163 Ga0207703_10024396 3300026035 Bacteria 4759
164 Ga0207703_10168451 3300026035 Bacteria 1925
165 Ga0207708_10244001 3300026075 Bacteria 1446
166 Ga0207648_10010434 3300026089 Bacteria 8802
167 Ga0207676_10030150 3300026095 Bacteria 4069
168 Ga0207676_10251545 3300026095 Bacteria 1591
169 Ga0207674_10004779 3300026116 Bacteria 16244
170 Ga0207674_10009130 3300026116 Bacteria 11377
171 Ga0207675_100092941 3300026118 Bacteria 2837
172 Ga0268266_10027299 3300028379 Bacteria 4855
173 Ga0268266_10056157 3300028379 Bacteria 3387
174 Ga0268265_10071214 3300028380 Bacteria 2707
175 Ga0268265_10073555 3300028380 Bacteria 2670
176 Ga0265326_10001135 3300028558 Bacteria 9491
177 Ga0307515_10000901 3300028794 Bacteria 68376
178 Ga0265338_10000053 3300028800 Bacteria 208184
179 Ga0265338_10000077 3300028800 Bacteria 178033
180 Ga0265324_10000461 3300029957 Bacteria 28660
181 Ga0265324_10028710 3300029957 Bacteria 1960
182 Ga0265339_10033046 3300031249 Bacteria 2916
183 Ga0265327_10008820 3300031251 Bacteria 7433
184 Ga0265316_10080447 3300031344 Bacteria 2499
185 Ga0307513_10024190 3300031456 Bacteria 7072
186 Ga0307513_10175609 3300031456 Bacteria 2013
187 Ga0265314_10160929 3300031711 Bacteria 1366
188 Ga0307406_10195492 3300031901 Bacteria 1485
189 Ga0307415_100245865 3300032126 Bacteria 1450
190 Ga0316593_10010376 3300032168 Bacteria 2669
191 Ga0373936_0256686 3300035113 Bacteria 782
192 Ga0373945_0230403 3300035116 Bacteria 777
193 Ga0373946_0032886 3300035171 Bacteria 2085
194 Ga0316584_0360140 3300036712 Bacteria 1043
195 Ga0395900_0495406 3300037418 Bacteria 1173
196 Ga0395898_0204975 3300037466 Bacteria 1882
197 Ga0395905_0000396 3300037471 Bacteria 61743
198 Ga0436364_0092736 3300037853 Bacteria 7656
199 Ga0436364_0281561 3300037853 Bacteria 1223
200 Ga0395901_0177938 3300038443 Bacteria 2231
201 Ga0436365_0315968 3300039437 Bacteria 22338
202 Ga0436365_0644928 3300039437 Bacteria 1466
203 Ga0436361_1190738 3300039447 Bacteria 3433
204 Ga0436363_1091532 3300039450 Bacteria 9589
205 Ga0436363_1636447 3300039450 Bacteria 4071
206 Ga0436362_0736840 3300039453 Bacteria 4703
207 Ga0439460_0000384 3300042461 Bacteria 9383
208 Ga0451577_0000352 3300042876 Bacteria 85624
209 Ga0451577_0000534 3300042876 Bacteria 62557
210 Ga0453683_0004976 3300044673 Bacteria 9334
211 Ga0453683_0015105 3300044673 Bacteria 5012
212 Ga0466966_0079571 3300044684 Bacteria 2042
213 Ga0453684_0001685 3300044712 Bacteria 59723
214 Ga0453684_0003600 3300044712 Bacteria 34563
215 Ga0453684_0043477 3300044712 Bacteria 6036
216 Ga0453684_0067241 3300044712 Bacteria 4558
217 Ga0453684_0390043 3300044712 Bacteria 1562
218 Ga0451576_0054923 3300045051 Bacteria 4168
219 Ga0495603_0368665 3300046455 Bacteria 824
220 Ga0495590_0011370 3300046457 Bacteria 3330
221 Ga0495580_0042108 3300046472 Bacteria 3255
222 Ga0495580_0157553 3300046472 Bacteria 1572
223 Ga0495582_0056227 3300046473 Bacteria 2169
224 Ga0495584_0013958 3300046491 Bacteria 4093
225 Ga0495665_0351758 3300046531 Bacteria 750
226 Ga0495645_0087866 3300046543 Bacteria 2224
227 Ga0495599_0225283 3300046678 Bacteria 1146
228 Ga0495669_0191232 3300046684 Bacteria 977
229 Ga0495649_0004024 3300046694 Bacteria 9680
230 Ga0496103_0135151 3300048906 Bacteria 1576
231 Ga0496104_0062619 3300048907 Bacteria 3527
232 Ga0496104_0077956 3300048907 Bacteria 3157
233 Ga0496104_0322225 3300048907 Bacteria 1458
234 Ga0496104_0414837 3300048907 Bacteria 1259
235 Ga0496105_0041724 3300048908 Bacteria 3781
236 Ga0496105_0575964 3300048908 Bacteria 876
237 Ga0496108_0016026 3300048911 Bacteria 6110
238 Ga0496108_0569213 3300048911 Bacteria 988
239 Ga0496109_0052664 3300048912 Bacteria 3710
240 Ga0496109_0198138 3300048912 Bacteria 1888
241 Ga0496110_0343644 3300048913 Bacteria 1359
242 Ga0496112_0203486 3300048915 Bacteria 1938
243 Ga0496114_0403514 3300048917 Bacteria 1210
244 Ga0496122_0000405 3300048925 Bacteria 91542
245 Ga0496123_0038361 3300048926 Bacteria 3369
246 Ga0501034_0000771 3300049571 Bacteria 47907
247 Ga0501034_0023837 3300049571 Bacteria 6232
248 Ga0501036_0074750 3300049572 Bacteria 2866
249 Ga0501037_0003104 3300049573 Bacteria 12042
250 Ga0501039_0250869 3300049575 Bacteria 1391
251 Ga0501040_0032538 3300049576 Bacteria 3529
252 Ga0501040_0159775 3300049576 Bacteria 1593
253 Ga0501040_0303220 3300049576 Bacteria 1142
254 Ga0501041_0577115 3300049577 Bacteria 717
255 Ga0501043_0321613 3300049579 Bacteria 1179
256 Ga0501047_0060267 3300049581 Bacteria 3663
257 Ga0501048_0039630 3300049582 Bacteria 3379
258 Ga0501048_0132560 3300049582 Bacteria 1761
259 Ga0501070_0090340 3300049586 Bacteria 2535
260 Ga0501070_0142629 3300049586 Bacteria 1978
261 Ga0501071_0106073 3300049587 Bacteria 2075
262 Ga0501072_0165768 3300049588 Bacteria 1763
263 Ga0501075_0145048 3300049591 Bacteria 1809
264 Ga0501076_0410869 3300049592 Bacteria 1113
265 Ga0501077_0109679 3300049593 Bacteria 1749
266 Ga0501080_0013806 3300049742 Bacteria 7435
267 Ga0501081_0018396 3300049743 Bacteria 4641
268 Ga0501081_0087045 3300049743 Bacteria 2194
269 Ga0501081_0341817 3300049743 Unclassified 1102
270 Ga0501083_0031867 3300049744 Bacteria 3617
271 Ga0501044_0000187 3300049823 Bacteria 77620
272 Ga0501044_0008723 3300049823 Bacteria 11097
273 Ga0501044_0012564 3300049823 Bacteria 9171
274 Ga0501044_0198903 3300049823 Bacteria 1963
275 Ga0501212_013527 3300049851 Bacteria 1198
276 nmdc:mga0yw44_234424_c1 3300050492 Unclassified 1219
277 nmdc:mga05p37_153630_c1 3300050507 Bacteria 2814
278 nmdc:mga05p37_388997_c1 3300050507 Bacteria 1631
279 nmdc:mga05p37_684064_c1 3300050507 Bacteria 1143
280 nmdc:mga09592_175_c1 3300050508 Bacteria 45631
281 nmdc:mga09592_25266_c1 3300050508 Bacteria 4915
282 nmdc:mga0qj67_728084_c1 3300050509 Bacteria 788
283 nmdc:mga06r32_631071_c1 3300050510 Bacteria 1041
284 nmdc:mga08y16_58980_c1 3300050511 Bacteria 4010
285 nmdc:mga0n895_267511_c1 3300050512 Bacteria 1734
286 nmdc:mga0n895_88322_c1 3300050512 Bacteria 3099
287 nmdc:mga0a205_4198_c1 3300050515 Bacteria 12918
288 nmdc:mga0a205_50429_c1 3300050515 Bacteria 4018
289 Ga0500635_0022465 3300053080 Bacteria 1956
290 Ga0501084_0121473 3300054114 Bacteria 2196
291 Ga0501084_0383456 3300054114 Unclassified 1188
292 Ga0501082_0241907 3300060353 Unclassified 1570
293 Ga0530510_0029941 3300061734 Bacteria 3908
294 Ga0530510_0071050 3300061734 Bacteria 2526
295 2673162753 2671180531 Bacteria 9045424
296 Ga0068864_100358958
297 JGI24751J29686_10003775
298 JGI25406J46586_10000229
299 rootL2_10125795
300 Ga0070658_10093285
301 Ga0070658_10330330
302 Ga0070670_100019963
303 Ga0068869_100001174
304 Ga0070680_100024222
305 Ga0070689_100000243
306 Ga0070689_100050154
307 Ga0070668_100236315
308 Ga0070669_100154532
309 Ga0070675_100122173
310 Ga0070674_100063943
311 Ga0070673_100058132
312 Ga0070673_100352210
313 Ga0070673_100387366
314 Ga0070688_100000065
315 Ga0070688_100016013
316 Ga0070705_100090839
317 Ga0070681_10284480
318 Ga0068867_100004378
319 Ga0070706_100003893
320 Ga0070706_100106117
321 Ga0070707_100001617
322 Ga0070698_100000290
323 Ga0070699_100000876
324 Ga0070697_100025987
325 Ga0070697_100136388
326 Ga0068853_100887101
327 Ga0070686_100448863
328 Ga0070696_100016724
329 Ga0070693_100000653
330 Ga0070665_100048458
331 Ga0068855_100001382
332 Ga0068857_100008322
333 Ga0068857_100013889
334 Ga0068854_100262514
335 Ga0068854_100385595
336 Ga0070702_100004055
337 Ga0068859_100005618
338 Ga0068859_100350304
339 Ga0068859_100695430
340 Ga0068866_10000282
341 Ga0068866_10096738
342 Ga0068861_100456079
343 Ga0068858_100027354
344 Ga0068860_100091851
345 Ga0068860_100153734
346 Ga0068862_100037152
347 Ga0081455_10024541
348 Ga0081539_10000034
349 Ga0081539_10000469
350 Ga0081539_10009464
351 Ga0081539_10032251
352 Ga0075365_10035393
353 Ga0075368_10018678
354 Ga0075363_100039196
355 Ga0075364_10294300
356 Ga0075367_10126763
357 Ga0068871_100420463
358 Ga0075428_100023194
359 Ga0075428_100106947
360 Ga0075428_100166228
361 Ga0075430_100000001
362 Ga0075430_100007462
363 Ga0075430_100120303
364 Ga0075431_100010987
365 Ga0075431_100150919
366 Ga0075433_10037220
367 Ga0075433_10063305
368 Ga0075434_100093011
369 Ga0075434_100143684
370 Ga0075429_100000307
371 Ga0075429_100124643
372 Ga0075429_100479433
373 Ga0097620_100005618
374 Ga0097620_100350290
375 Ga0097620_100695431
376 Ga0099794_10002941
377 Ga0105240_10003492
378 Ga0105240_10413741
379 Ga0111539_10099596
380 Ga0105245_10310257
381 Ga0105245_10430756
382 Ga0105245_10597387
383 Ga0105247_10298328
384 Ga0114129_10010842
385 Ga0114129_10097767
386 Ga0114129_10147709
387 Ga0114129_10364662
388 Ga0105243_10050322
389 Ga0105242_10000802
390 Ga0105242_10004271
391 Ga0105242_10233849
392 Ga0105248_10017878
393 Ga0105248_10045196
394 Ga0105248_10276556
395 Ga0105238_10132041
396 Ga0105249_10002084
397 Ga0105249_10009391
398 Ga0105249_10037718
399 Ga0105249_10054915
400 Ga0105249_10151302
401 Ga0105239_10002304
402 Ga0105239_10618270
403 Ga0105246_10039241
404 Ga0157371_10069803
405 Ga0157374_10511443
406 Ga0157378_10132082
407 Ga0157378_10643497
408 Ga0157378_11114628
409 Ga0157375_10027286
410 Ga0157375_10034516
411 Ga0157375_10506894
412 Ga0163163_10091486
413 Ga0163163_10136317
414 Ga0163163_10462592
415 Ga0163163_10739551
416 Ga0157379_10111274
417 Ga0157379_10370642
418 Ga0163161_10109277
419 Ga0206351_10060624
420 Ga0213873_10003422
421 Ga0213874_10004615
422 Ga0213876_10013487
423 Ga0213875_10037926
424 Ga0209233_1011256
425 Ga0207642_10000087
426 Ga0207642_10028353
427 Ga0207688_10041908
428 Ga0207645_10138190
429 Ga0207705_10039648
430 Ga0207705_10072252
431 Ga0207705_10461277
432 Ga0207684_10008814
433 Ga0207695_10007095
434 Ga0207695_10119486
435 Ga0207660_10378340
436 Ga0207657_10189435
437 Ga0207646_10011520
438 Ga0207687_10285000
439 Ga0207686_10000545
440 Ga0207686_10186290
441 Ga0207670_10000018
442 Ga0207670_10031960
443 Ga0207704_10389118
444 Ga0207691_10151328
445 Ga0207691_10229274
446 Ga0207711_10437100
447 Ga0207711_10494367
448 Ga0207689_10003871
449 Ga0207661_10238511
450 Ga0207651_10103172
451 Ga0207651_10284639
452 Ga0207712_10022784
453 Ga0207712_10026696
454 Ga0207712_10034594
455 Ga0207712_10037542
456 Ga0207640_10344030
457 Ga0207677_10716982
458 Ga0207703_10024396
459 Ga0207703_10168451
460 Ga0207708_10244001
461 Ga0207648_10010434
462 Ga0207676_10030150
463 Ga0207676_10251545
464 Ga0207674_10004779
465 Ga0207674_10009130
466 Ga0207675_100092941
467 Ga0268266_10027299
468 Ga0268266_10056157
469 Ga0268265_10071214
470 Ga0268265_10073555
471 Ga0265326_10001135
472 Ga0307515_10000901
473 Ga0265338_10000053
474 Ga0265338_10000077
475 Ga0265324_10000461
476 Ga0265324_10028710
477 Ga0265339_10033046
478 Ga0265327_10008820
479 Ga0265316_10080447
480 Ga0307513_10024190
481 Ga0307513_10175609
482 Ga0265314_10160929
483 Ga0307406_10195492
484 Ga0307415_100245865
485 Ga0316593_10010376
486 Ga0373936_0256686
487 Ga0373945_0230403
488 Ga0373946_0032886
489 Ga0316584_0360140
490 Ga0395900_0495406
491 Ga0395898_0204975
492 Ga0395905_0000396
493 Ga0436364_0092736
494 Ga0436364_0281561
495 Ga0395901_0177938
496 Ga0436365_0315968
497 Ga0436365_0644928
498 Ga0436361_1190738
499 Ga0436363_1091532
500 Ga0436363_1636447
501 Ga0436362_0736840
502 Ga0439460_0000384
503 Ga0451577_0000352
504 Ga0451577_0000534
505 Ga0453683_0004976
506 Ga0453683_0015105
507 Ga0466966_0079571
508 Ga0453684_0001685
509 Ga0453684_0003600
510 Ga0453684_0043477
511 Ga0453684_0067241
512 Ga0453684_0390043
513 Ga0451576_0054923
514 Ga0495603_0368665
515 Ga0495590_0011370
516 Ga0495580_0042108
517 Ga0495580_0157553
518 Ga0495582_0056227
519 Ga0495584_0013958
520 Ga0495665_0351758
521 Ga0495645_0087866
522 Ga0495599_0225283
523 Ga0495669_0191232
524 Ga0495649_0004024
525 Ga0496103_0135151
526 Ga0496104_0062619
527 Ga0496104_0077956
528 Ga0496104_0322225
529 Ga0496104_0414837
530 Ga0496105_0041724
531 Ga0496105_0575964
532 Ga0496108_0016026
533 Ga0496108_0569213
534 Ga0496109_0052664
535 Ga0496109_0198138
536 Ga0496110_0343644
537 Ga0496112_0203486
538 Ga0496114_0403514
539 Ga0496122_0000405
540 Ga0496123_0038361
541 Ga0501034_0000771
542 Ga0501034_0023837
543 Ga0501036_0074750
544 Ga0501037_0003104
545 Ga0501039_0250869
546 Ga0501040_0032538
547 Ga0501040_0159775
548 Ga0501040_0303220
549 Ga0501041_0577115
550 Ga0501043_0321613
551 Ga0501047_0060267
552 Ga0501048_0039630
553 Ga0501048_0132560
554 Ga0501070_0090340
555 Ga0501070_0142629
556 Ga0501071_0106073
557 Ga0501072_0165768
558 Ga0501075_0145048
559 Ga0501076_0410869
560 Ga0501077_0109679
561 Ga0501080_0013806
562 Ga0501081_0018396
563 Ga0501081_0087045
564 Ga0501081_0341817
565 Ga0501083_0031867
566 Ga0501044_0000187
567 Ga0501044_0008723
568 Ga0501044_0012564
569 Ga0501044_0198903
570 Ga0501212_013527
571 nmdc:mga0yw44_234424_c1
572 nmdc:mga05p37_153630_c1
573 nmdc:mga05p37_388997_c1
574 nmdc:mga05p37_684064_c1
575 nmdc:mga09592_175_c1
576 nmdc:mga09592_25266_c1
577 nmdc:mga0qj67_728084_c1
578 nmdc:mga06r32_631071_c1
579 nmdc:mga08y16_58980_c1
580 nmdc:mga0n895_267511_c1
581 nmdc:mga0n895_88322_c1
582 nmdc:mga0a205_4198_c1
583 nmdc:mga0a205_50429_c1
584 Ga0500635_0022465
585 Ga0501084_0121473
586 Ga0501084_0383456
587 Ga0501082_0241907
588 Ga0530510_0029941
589 Ga0530510_0071050
590 2673162753

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00483

NTP_transferase

Nucleotidyl transferase

44

281

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wvc-assembly1.cif.gz_A alpha-d-glucose-1-phosphate cytidylyltransferase complexed with ctp 0.9013 2 258
1tzf-assembly1.cif.gz_A x-ray crystal structure of alpha-d-glucose-1-phosphate cytidylyltransferase from salmonella typhi 0.8978 2 258
1wvc-assembly1.cif.gz_A alpha-d-glucose-1-phosphate cytidylyltransferase complexed with ctp 0.8877 2 258
1tzf-assembly1.cif.gz_A x-ray crystal structure of alpha-d-glucose-1-phosphate cytidylyltransferase from salmonella typhi 0.8808 2 258
7d73-assembly1.cif.gz_F cryo-em structure of gmppa/gmppb complex bound to gtp (state i) 0.8365 1 251
ID Description Score Start End Superfamily
1tzfA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8978 2 258 3.90.550.10
1tzfA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8808 2 258 3.90.550.10
af_L7N6A5_2_240_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.812 2 251 3.90.550.10
af_K7LRM0_18_167_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8117 93 240 3.90.550.10
4y7vA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8077 1 249 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A529I2Z1-F1-model_v4 deleted 0.9815 1 148
AF-A0A6N4EBR6-F1-model_v4 deleted 0.9795 1 113
AF-A0A382ARP2-F1-model_v4 Nucleotidyl transferase domain-containing protein 0.976 1 136 GO:0009058
GO:0047343
AF-A0A3D3U7I1-F1-model_v4 deleted 0.969 1 97
AF-I2HNG4-F1-model_v4 deleted 0.9669 1 258

Map