F391789

General Info

Members Datasets Scaffolds Average Seq Length
293 216 586 715

Family's Representative Sequence

Representative Sequence 3300053139|Ga0500568_0002990|Ga0500568_0002990_3793_6219
Length 780
Sequence MLTHPTTTGTPASETGGTDTPREASPISNPALKRAANRRWSPAAFPISPYTPLGLGRRVRTPTVLQMEAVECGAAALASVLGYFGRWVPLEELRQACGVSRDGSKASNLLKAARTYGLEAKGYKYDAIDKLRELDLPAVLFWNFNHFVVLDGFAHDRVFLNDPAQGPRAVSYEELDGSYSGVVLAFKPGPEFTPGGTPPDLVAALRRRLIGSEEALAFVVLCGLFLVVPGLMVPTFSRIFIDDYLIGGQQWLVRPLLVAMAATIVIQGILAWLQQRYLLRLETKLALATSSRFFQHILRLPAAYFGQRFAGEIGSRVAINDKVARAISGXXXXTAIDSXXXXFYVLVVSIALLNVGAVVLVSRVRIDMSRRLMQDKGKLLGTAMSGLQMIETLKATGSEGEFFARWAGYHARTMNTEQTIGVLSQMVAAVPPFSQTMSTAVVLVLGGMQVMNGHLTVGMLVAYQALLTAFTRPLSNFVQFGSMLQELQADMNRLDDVLRYPQDTEYTQGAALPGAASTTVSASGPATGLAEAASIERRLVKLSGRVELRDVTFGYSPLERPLIEGFSLRVEPGHRVAIVGSSGSGKSTVAKLIAGLYQPWSGEILFDDAPRREIPRDVLTNSIGCVDQDIFLFRGNVSDNVRMWDATIPEARVAQACRDGAIDEVVESRDQSYQSAVQEGGGNFSGGQCQRLEIARALVGGPTILVLDEATSALDPSTEALIDDAVRRRGCTAIIVAHRLSTIRDCDEIVVLERGRIVQRGTHDAMKGVEGPYQRLIALS

Samples

Sample ID Description Type Environment
1 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
79 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
80 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
83 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
84 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
85 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
86 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
87 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
90 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
100 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
101 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
104 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
105 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
110 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
113 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
114 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
115 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
118 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
119 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
120 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
121 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
122 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
125 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
126 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
127 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
128 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
129 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
130 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
131 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
132 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
133 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
141 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
147 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
148 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
149 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
150 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
151 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
158 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
165 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
166 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
167 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
168 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
169 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
174 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
175 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
176 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
177 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
178 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
179 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
180 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
181 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
182 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
183 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
184 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
185 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
186 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
187 2791355199
188 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
189 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
190 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
191 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
192 2831426010 Nostoc sp. 106C Isolate Unclassified
193 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
194 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
195 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
196 2849660919 Nostoc sp. T09 Isolate Unclassified
197 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
198 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
199 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
200 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
201 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
202 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
203 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
204 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
205 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
206 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
207 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
208 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
209 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
210 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
211 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
212 641522639 Methylobacterium sp. 4-46 Isolate Nodule
213 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified
214 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
215 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
216 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.64
Metatranscriptomes 0
Isolates 13.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.22
Nodule 4.44
Rhizoplane 6.48
Rhizosphere 64.85
Stem 0
Stem Tuber 0
Unclassified 1.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500568_0002990 3300053139 Bacteria 9672
2 JGI25153J46596_10000033 3300003215 Bacteria 194912
3 JGI25153J46596_10000047 3300003215 Bacteria 146400
4 rootH1_10022586 3300003316 Bacteria 8232
5 JGI25407J50210_10000319 3300003373 Bacteria 8914
6 Ga0065165_1002284 3300005262 Bacteria 16827
7 Ga0065704_10075701 3300005289 Bacteria 5460
8 Ga0070683_100002716 3300005329 Bacteria 14130
9 Ga0070683_100089544 3300005329 Bacteria 2888
10 Ga0070668_100008048 3300005347 Bacteria 7831
11 Ga0070668_100026568 3300005347 Unclassified 4394
12 Ga0070713_100026016 3300005436 Bacteria 4587
13 Ga0070710_10013145 3300005437 Bacteria 4136
14 Ga0070711_100005254 3300005439 Bacteria 7730
15 Ga0070711_100006832 3300005439 Bacteria 6906
16 Ga0070711_100023014 3300005439 Bacteria 4046
17 Ga0070681_10004091 3300005458 Bacteria 13784
18 Ga0070685_10001899 3300005466 Bacteria 10862
19 Ga0070679_100014751 3300005530 Bacteria 7508
20 Ga0070684_100010003 3300005535 Bacteria 7498
21 Ga0070684_100084362 3300005535 Bacteria 2816
22 Ga0068853_100027403 3300005539 Bacteria 4787
23 Ga0070672_100060395 3300005543 Bacteria 2985
24 Ga0070665_100006050 3300005548 Bacteria 12367
25 Ga0068855_100031907 3300005563 Bacteria 6289
26 Ga0068856_100003516 3300005614 Bacteria 15801
27 Ga0068856_100071458 3300005614 Bacteria 3436
28 Ga0068866_10004455 3300005718 Bacteria 5750
29 Ga0068858_100036588 3300005842 Unclassified 4551
30 Ga0068860_100098762 3300005843 Unclassified 2784
31 Ga0081455_10005811 3300005937 Bacteria 13435
32 Ga0081538_10000353 3300005981 Bacteria 52501
33 Ga0081538_10000721 3300005981 Bacteria 35990
34 Ga0081538_10001802 3300005981 Bacteria 21614
35 Ga0081538_10005224 3300005981 Bacteria 11735
36 Ga0081538_10013230 3300005981 Bacteria 6546
37 Ga0081540_1004240 3300005983 Bacteria 11014
38 Ga0081540_1033953 3300005983 Bacteria 2760
39 Ga0081539_10000315 3300005985 Bacteria 108441
40 Ga0070716_100028782 3300006173 Bacteria 2997
41 Ga0070712_100000582 3300006175 Bacteria 21294
42 Ga0075362_10004642 3300006177 Bacteria 4952
43 Ga0075362_10019364 3300006177 Bacteria 2828
44 Ga0075367_10015089 3300006178 Bacteria 4191
45 Ga0075428_100025679 3300006844 Bacteria 6523
46 Ga0075430_100004179 3300006846 Bacteria 12187
47 Ga0075433_10002357 3300006852 Bacteria 14366
48 Ga0075433_10005140 3300006852 Bacteria 10265
49 Ga0075434_100002893 3300006871 Bacteria 15240
50 Ga0105240_10006249 3300009093 Bacteria 17522
51 Ga0105240_10009484 3300009093 Bacteria 13778
52 Ga0105245_10062103 3300009098 Bacteria 3370
53 Ga0114129_10014311 3300009147 Bacteria 11306
54 Ga0114129_10022595 3300009147 Bacteria 8922
55 Ga0114129_10078499 3300009147 Bacteria 4592
56 Ga0105243_10099647 3300009148 Bacteria 2409
57 Ga0105248_10017205 3300009177 Bacteria 7965
58 Ga0105237_10035147 3300009545 Bacteria 5072
59 Ga0105237_10035307 3300009545 Bacteria 5059
60 Ga0105237_10037606 3300009545 Bacteria 4891
61 Ga0105238_10004819 3300009551 Bacteria 13350
62 Ga0105238_10013819 3300009551 Bacteria 8161
63 Ga0105238_10092637 3300009551 Bacteria 3010
64 Ga0105249_10062789 3300009553 Unclassified 3411
65 Ga0105239_10015997 3300010375 Bacteria 8303
66 Ga0105239_10021611 3300010375 Bacteria 7095
67 Ga0157370_10014264 3300013104 Bacteria 8135
68 Ga0157369_10001948 3300013105 Bacteria 24864
69 Ga0157369_10004602 3300013105 Bacteria 16208
70 Ga0157369_10009065 3300013105 Bacteria 11391
71 Ga0157374_10004640 3300013296 Bacteria 11522
72 Ga0157378_10068235 3300013297 Bacteria 3188
73 Ga0163162_10016919 3300013306 Bacteria 7131
74 Ga0157379_10062749 3300014968 Bacteria 3323
75 Ga0157376_10055863 3300014969 Bacteria 3296
76 Ga0213876_10001975 3300021384 Bacteria 12265
77 Ga0213871_10000634 3300021441 Bacteria 5017
78 Ga0209758_1000070 3300025297 Bacteria 284093
79 Ga0209758_1000656 3300025297 Bacteria 52042
80 Ga0209050_1006186 3300025298 Bacteria 7196
81 Ga0207426_1000328 3300025302 Bacteria 90659
82 Ga0209257_1000296 3300025304 Bacteria 109517
83 Ga0207699_10015482 3300025906 Bacteria 3962
84 Ga0207684_10031034 3300025910 Bacteria 4548
85 Ga0207707_10003690 3300025912 Bacteria 13574
86 Ga0207707_10067137 3300025912 Bacteria 3124
87 Ga0207695_10005552 3300025913 Bacteria 16670
88 Ga0207693_10004197 3300025915 Bacteria 12217
89 Ga0207693_10024668 3300025915 Bacteria 4769
90 Ga0207663_10003202 3300025916 Bacteria 7967
91 Ga0207663_10008301 3300025916 Bacteria 5421
92 Ga0207652_10050382 3300025921 Bacteria 3567
93 Ga0207694_10011689 3300025924 Bacteria 6622
94 Ga0207694_10017658 3300025924 Bacteria 5393
95 Ga0207686_10041180 3300025934 Bacteria 2815
96 Ga0207665_10008359 3300025939 Bacteria 6829
97 Ga0207711_10028496 3300025941 Bacteria 4699
98 Ga0207667_10002196 3300025949 Bacteria 24481
99 Ga0207667_10051078 3300025949 Bacteria 4360
100 Ga0207712_10044237 3300025961 Bacteria 3076
101 Ga0207639_10035349 3300026041 Bacteria 3697
102 Ga0207702_10002483 3300026078 Bacteria 17418
103 Ga0207675_100002265 3300026118 Bacteria 19131
104 Ga0209588_1000336 3300027671 Bacteria 12365
105 Ga0268266_10012138 3300028379 Bacteria 7456
106 Ga0307517_10000132 3300028786 Bacteria 113054
107 Ga0307515_10031479 3300028794 Bacteria 8843
108 Ga0265324_10001177 3300029957 Bacteria 15585
109 Ga0265324_10002981 3300029957 Bacteria 8279
110 Ga0307511_10009079 3300030521 Bacteria 9916
111 Ga0265331_10000033 3300031250 Bacteria 203767
112 Ga0265327_10000856 3300031251 Bacteria 45489
113 Ga0307513_10004193 3300031456 Bacteria 19284
114 Ga0265313_10001330 3300031595 Bacteria 23259
115 Ga0307508_10000001 3300031616 Bacteria 553635
116 Ga0307508_10028222 3300031616 Bacteria 5076
117 Ga0265314_10005109 3300031711 Bacteria 11947
118 Ga0316576_10000995 3300031727 Bacteria 14587
119 Ga0307516_10007205 3300031730 Bacteria 12831
120 Ga0307416_100007998 3300032002 Bacteria 6773
121 Ga0373959_0000017 3300034820 Bacteria 42262
122 Ga0373926_0000517 3300035083 Bacteria 10270
123 Ga0373935_0007112 3300035692 Bacteria 6682
124 Ga0373927_0037497 3300035695 Bacteria 3150
125 Ga0373947_0007048 3300035725 Bacteria 6516
126 Ga0395900_0001115 3300037418 Bacteria 34040
127 Ga0395900_0002777 3300037418 Bacteria 19137
128 Ga0395900_0013838 3300037418 Bacteria 8232
129 Ga0395900_0053093 3300037418 Bacteria 4171
130 Ga0395898_0000060 3300037466 Bacteria 273835
131 Ga0395898_0002013 3300037466 Bacteria 25494
132 Ga0395898_0019140 3300037466 Bacteria 6970
133 Ga0395905_0019025 3300037471 Bacteria 6513
134 Ga0395901_0018308 3300038443 Bacteria 7152
135 Ga0436365_1393969 3300039437 Bacteria 14642
136 Ga0436365_1596478 3300039437 Bacteria 92213
137 Ga0436360_0636443 3300039438 Bacteria 7943
138 Ga0436360_0673279 3300039438 Bacteria 15802
139 Ga0436361_0030565 3300039447 Bacteria 7492
140 Ga0436361_0299198 3300039447 Bacteria 5532
141 Ga0436361_0735635 3300039447 Bacteria 5117
142 Ga0436363_0255716 3300039450 Bacteria 4012
143 Ga0451577_0042253 3300042876 Bacteria 4089
144 Ga0466972_0003547 3300044658 Bacteria 7748
145 Ga0466966_0000837 3300044684 Bacteria 19645
146 Ga0466961_0000005 3300044693 Bacteria 173105
147 Ga0453684_0000151 3300044712 Bacteria 306256
148 Ga0453684_0008348 3300044712 Bacteria 18614
149 Ga0453684_0008687 3300044712 Bacteria 18070
150 Ga0453684_0015368 3300044712 Bacteria 12120
151 Ga0466959_0001136 3300045049 Bacteria 16045
152 Ga0451576_0000194 3300045051 Bacteria 154080
153 Ga0495592_0006343 3300046454 Bacteria 8809
154 Ga0495603_0044858 3300046455 Bacteria 2638
155 Ga0495629_0069659 3300046459 Bacteria 2454
156 Ga0495651_0008916 3300046462 Bacteria 7703
157 Ga0495664_0002415 3300046477 Bacteria 10038
158 Ga0495664_0003138 3300046477 Bacteria 8974
159 Ga0495583_0032814 3300046506 Bacteria 2504
160 Ga0495618_0009907 3300046514 Bacteria 5767
161 Ga0495630_0031570 3300046517 Bacteria 3945
162 Ga0495630_0065661 3300046517 Bacteria 2727
163 Ga0495643_0000025 3300046522 Bacteria 269043
164 Ga0495643_0000100 3300046522 Bacteria 144402
165 Ga0495652_0069209 3300046529 Bacteria 2955
166 Ga0495640_0027932 3300046533 Bacteria 4065
167 Ga0495598_0002586 3300046537 Bacteria 3746
168 Ga0495621_0002222 3300046539 Bacteria 5184
169 Ga0495597_0003151 3300046542 Bacteria 9876
170 Ga0495645_0011827 3300046543 Bacteria 6149
171 Ga0495634_0006668 3300046642 Bacteria 8755
172 Ga0495635_0008886 3300046663 Bacteria 7013
173 Ga0495599_0010103 3300046678 Bacteria 5777
174 Ga0495599_0013745 3300046678 Bacteria 5007
175 Ga0495670_0009006 3300046691 Bacteria 4910
176 Ga0495671_0021835 3300046692 Bacteria 3357
177 Ga0495600_0043292 3300046809 Bacteria 2936
178 Ga0495600_0062685 3300046809 Bacteria 2429
179 Ga0495674_0000972 3300047319 Bacteria 27475
180 Ga0495672_0010311 3300047320 Bacteria 6673
181 Ga0495680_0008288 3300047322 Bacteria 9464
182 Ga0495684_0003651 3300047471 Bacteria 11987
183 Ga0495686_0011456 3300047472 Bacteria 6245
184 Ga0496102_0076605 3300048905 Bacteria 3077
185 Ga0496103_0013928 3300048906 Bacteria 4774
186 Ga0496104_0010704 3300048907 Bacteria 8202
187 Ga0496104_0097566 3300048907 Bacteria 2813
188 Ga0496105_0014260 3300048908 Bacteria 6324
189 Ga0496105_0064699 3300048908 Unclassified 3018
190 Ga0496106_0000749 3300048909 Bacteria 23393
191 Ga0496106_0015518 3300048909 Bacteria 5637
192 Ga0496107_0000696 3300048910 Bacteria 19135
193 Ga0496108_0001017 3300048911 Bacteria 21856
194 Ga0496108_0031639 3300048911 Bacteria 4391
195 Ga0496109_0000643 3300048912 Bacteria 28967
196 Ga0496110_0003677 3300048913 Bacteria 11799
197 Ga0496110_0084078 3300048913 Bacteria 2840
198 Ga0496111_0023246 3300048914 Bacteria 4351
199 Ga0496111_0032479 3300048914 Bacteria 3722
200 Ga0496112_0002522 3300048915 Bacteria 14782
201 Ga0496113_0038210 3300048916 Bacteria 3529
202 Ga0496114_0061448 3300048917 Bacteria 3142
203 Ga0496119_0021455 3300048922 Bacteria 4669
204 Ga0496120_0045257 3300048923 Bacteria 2550
205 Ga0496124_0001495 3300048927 Bacteria 34256
206 Ga0496125_0019105 3300048928 Bacteria 6479
207 Ga0496126_0112429 3300048929 Bacteria 2371
208 Ga0501034_0073705 3300049571 Bacteria 3423
209 Ga0501041_0043633 3300049577 Bacteria 2726
210 Ga0501043_0025731 3300049579 Bacteria 4616
211 Ga0501047_0002738 3300049581 Bacteria 16790
212 Ga0501047_0027573 3300049581 Bacteria 5472
213 Ga0501047_0041287 3300049581 Bacteria 4458
214 Ga0501067_0015022 3300049583 Bacteria 4284
215 Ga0501068_0045986 3300049584 Bacteria 2631
216 Ga0501070_0003786 3300049586 Bacteria 13074
217 Ga0501073_0028142 3300049589 Bacteria 4016
218 Ga0501080_0002854 3300049742 Bacteria 15187
219 Ga0501080_0008916 3300049742 Bacteria 9121
220 Ga0501080_0037405 3300049742 Bacteria 4533
221 Ga0501080_0061375 3300049742 Bacteria 3499
222 Ga0501083_0001258 3300049744 Bacteria 17179
223 Ga0501044_0023175 3300049823 Bacteria 6607
224 Ga0501044_0096407 3300049823 Bacteria 2979
225 nmdc:mga03683_1665_c1 3300050489 Bacteria 6684
226 nmdc:mga00v17_7306_c1 3300050491 Bacteria 5887
227 nmdc:mga0yw44_800_c1 3300050492 Bacteria 11709
228 nmdc:mga06z11_14759_c1 3300050494 Bacteria 3468
229 nmdc:mga06z11_8779_c1 3300050494 Bacteria 4234
230 nmdc:mga05p37_9316_c1 3300050507 Bacteria 11614
231 nmdc:mga0qj67_16190_c1 3300050509 Bacteria 5650
232 nmdc:mga06r32_16827_c1 3300050510 Bacteria 6668
233 nmdc:mga06r32_83872_c1 3300050510 Bacteria 3105
234 nmdc:mga06r32_99549_c1 3300050510 Bacteria 2851
235 nmdc:mga0n895_38800_c1 3300050512 Bacteria 4617
236 nmdc:mga0a205_3087_c1 3300050515 Bacteria 14782
237 nmdc:mga0a205_3538_c1 3300050515 Bacteria 13967
238 nmdc:mga0sz30_440_c1 3300050516 Bacteria 12989
239 Ga0495601_0006835 3300053077 Bacteria 6681
240 Ga0495601_0008363 3300053077 Bacteria 6113
241 Ga0495601_0011870 3300053077 Bacteria 5224
242 Ga0495601_0058668 3300053077 Bacteria 2440
243 Ga0495619_0002741 3300053085 Bacteria 11507
244 Ga0495619_0004961 3300053085 Bacteria 8454
245 Ga0500651_0002443 3300053093 Bacteria 9811
246 Ga0500641_0000109 3300053096 Bacteria 31691
247 Ga0500641_0000545 3300053096 Bacteria 13618
248 Ga0500595_000794 3300053119 Bacteria 18361
249 Ga0500595_001200 3300053119 Bacteria 14322
250 Ga0500595_004161 3300053119 Bacteria 6559
251 Ga0500568_0012366 3300053139 Bacteria 3929
252 Ga0500604_0000410 3300053151 Bacteria 11781
253 Ga0500609_000133 3300053731 Bacteria 9820
254 2513589345 2513237087 Bacteria 5817514
255 2513721221 2513237104 Bacteria 10034502
256 2513889486 2513237141 Bacteria 8496279
257 2524609721 2524023250 Bacteria 5457705
258 2545677519 2545555834 Bacteria 8130841
259 2617912963 2617270889 Bacteria 9064343
260 2617917923 2617270889 Bacteria 9064343
261 2793077932
262 2819241780 2818991272 Bacteria 4622173
263 2824705428 2824704595 Bacteria 9667483
264 2824755430 2824753945 Bacteria 9787441
265 2824763714 2824763712 Bacteria 9792355
266 2831429129 2831426010 Bacteria 8662725
267 2831432725 2831426010 Bacteria 8662725
268 2841960790 2841957949 Bacteria 8652217
269 2844320626 2844315083 Bacteria 8138177
270 2848695729 2848694841 Bacteria 9205737
271 2848700844 2848694841 Bacteria 9205737
272 2849662622 2849660919 Bacteria 8251853
273 2874617573 2874612657 Bacteria 8252029
274 2881672846 2881665667 Bacteria 8175609
275 2885376300 2885374607 Bacteria 8927485
276 2886631335 2886627955 Bacteria 7618130
277 2888392534 2888388044 Bacteria 7304136
278 2897808309 2897803580 Bacteria 7000062
279 2903734606 2903727486 Bacteria 8281579
280 2904716612 2904711408 Bacteria 9771557
281 2906605717 2906602504 Bacteria 8295279
282 2906633815 2906626472 Bacteria 8826946
283 2908744016 2908739725 Bacteria 8628932
284 2913939892 2913939268 Bacteria 8559644
285 3005480697 3005474847 Bacteria 9259049
286 3005600589 3005594810 Bacteria 8716512
287 3005723410 3005718088 Bacteria 8283608
288 641640432 641522639 Bacteria 7737025
289 642601022 642555144 Bacteria 9059191
290 642605933 642555144 Bacteria 9059191
291 643598185 643348564 Bacteria 8839022
292 8005661155 8005658619 Bacteria 4500593
293 8056969295 8056967851 Bacteria 9038162
294 Ga0500568_0002990
295 JGI25153J46596_10000033
296 JGI25153J46596_10000047
297 rootH1_10022586
298 JGI25407J50210_10000319
299 Ga0065165_1002284
300 Ga0065704_10075701
301 Ga0070683_100002716
302 Ga0070683_100089544
303 Ga0070668_100008048
304 Ga0070668_100026568
305 Ga0070713_100026016
306 Ga0070710_10013145
307 Ga0070711_100005254
308 Ga0070711_100006832
309 Ga0070711_100023014
310 Ga0070681_10004091
311 Ga0070685_10001899
312 Ga0070679_100014751
313 Ga0070684_100010003
314 Ga0070684_100084362
315 Ga0068853_100027403
316 Ga0070672_100060395
317 Ga0070665_100006050
318 Ga0068855_100031907
319 Ga0068856_100003516
320 Ga0068856_100071458
321 Ga0068866_10004455
322 Ga0068858_100036588
323 Ga0068860_100098762
324 Ga0081455_10005811
325 Ga0081538_10000353
326 Ga0081538_10000721
327 Ga0081538_10001802
328 Ga0081538_10005224
329 Ga0081538_10013230
330 Ga0081540_1004240
331 Ga0081540_1033953
332 Ga0081539_10000315
333 Ga0070716_100028782
334 Ga0070712_100000582
335 Ga0075362_10004642
336 Ga0075362_10019364
337 Ga0075367_10015089
338 Ga0075428_100025679
339 Ga0075430_100004179
340 Ga0075433_10002357
341 Ga0075433_10005140
342 Ga0075434_100002893
343 Ga0105240_10006249
344 Ga0105240_10009484
345 Ga0105245_10062103
346 Ga0114129_10014311
347 Ga0114129_10022595
348 Ga0114129_10078499
349 Ga0105243_10099647
350 Ga0105248_10017205
351 Ga0105237_10035147
352 Ga0105237_10035307
353 Ga0105237_10037606
354 Ga0105238_10004819
355 Ga0105238_10013819
356 Ga0105238_10092637
357 Ga0105249_10062789
358 Ga0105239_10015997
359 Ga0105239_10021611
360 Ga0157370_10014264
361 Ga0157369_10001948
362 Ga0157369_10004602
363 Ga0157369_10009065
364 Ga0157374_10004640
365 Ga0157378_10068235
366 Ga0163162_10016919
367 Ga0157379_10062749
368 Ga0157376_10055863
369 Ga0213876_10001975
370 Ga0213871_10000634
371 Ga0209758_1000070
372 Ga0209758_1000656
373 Ga0209050_1006186
374 Ga0207426_1000328
375 Ga0209257_1000296
376 Ga0207699_10015482
377 Ga0207684_10031034
378 Ga0207707_10003690
379 Ga0207707_10067137
380 Ga0207695_10005552
381 Ga0207693_10004197
382 Ga0207693_10024668
383 Ga0207663_10003202
384 Ga0207663_10008301
385 Ga0207652_10050382
386 Ga0207694_10011689
387 Ga0207694_10017658
388 Ga0207686_10041180
389 Ga0207665_10008359
390 Ga0207711_10028496
391 Ga0207667_10002196
392 Ga0207667_10051078
393 Ga0207712_10044237
394 Ga0207639_10035349
395 Ga0207702_10002483
396 Ga0207675_100002265
397 Ga0209588_1000336
398 Ga0268266_10012138
399 Ga0307517_10000132
400 Ga0307515_10031479
401 Ga0265324_10001177
402 Ga0265324_10002981
403 Ga0307511_10009079
404 Ga0265331_10000033
405 Ga0265327_10000856
406 Ga0307513_10004193
407 Ga0265313_10001330
408 Ga0307508_10000001
409 Ga0307508_10028222
410 Ga0265314_10005109
411 Ga0316576_10000995
412 Ga0307516_10007205
413 Ga0307416_100007998
414 Ga0373959_0000017
415 Ga0373926_0000517
416 Ga0373935_0007112
417 Ga0373927_0037497
418 Ga0373947_0007048
419 Ga0395900_0001115
420 Ga0395900_0002777
421 Ga0395900_0013838
422 Ga0395900_0053093
423 Ga0395898_0000060
424 Ga0395898_0002013
425 Ga0395898_0019140
426 Ga0395905_0019025
427 Ga0395901_0018308
428 Ga0436365_1393969
429 Ga0436365_1596478
430 Ga0436360_0636443
431 Ga0436360_0673279
432 Ga0436361_0030565
433 Ga0436361_0299198
434 Ga0436361_0735635
435 Ga0436363_0255716
436 Ga0451577_0042253
437 Ga0466972_0003547
438 Ga0466966_0000837
439 Ga0466961_0000005
440 Ga0453684_0000151
441 Ga0453684_0008348
442 Ga0453684_0008687
443 Ga0453684_0015368
444 Ga0466959_0001136
445 Ga0451576_0000194
446 Ga0495592_0006343
447 Ga0495603_0044858
448 Ga0495629_0069659
449 Ga0495651_0008916
450 Ga0495664_0002415
451 Ga0495664_0003138
452 Ga0495583_0032814
453 Ga0495618_0009907
454 Ga0495630_0031570
455 Ga0495630_0065661
456 Ga0495643_0000025
457 Ga0495643_0000100
458 Ga0495652_0069209
459 Ga0495640_0027932
460 Ga0495598_0002586
461 Ga0495621_0002222
462 Ga0495597_0003151
463 Ga0495645_0011827
464 Ga0495634_0006668
465 Ga0495635_0008886
466 Ga0495599_0010103
467 Ga0495599_0013745
468 Ga0495670_0009006
469 Ga0495671_0021835
470 Ga0495600_0043292
471 Ga0495600_0062685
472 Ga0495674_0000972
473 Ga0495672_0010311
474 Ga0495680_0008288
475 Ga0495684_0003651
476 Ga0495686_0011456
477 Ga0496102_0076605
478 Ga0496103_0013928
479 Ga0496104_0010704
480 Ga0496104_0097566
481 Ga0496105_0014260
482 Ga0496105_0064699
483 Ga0496106_0000749
484 Ga0496106_0015518
485 Ga0496107_0000696
486 Ga0496108_0001017
487 Ga0496108_0031639
488 Ga0496109_0000643
489 Ga0496110_0003677
490 Ga0496110_0084078
491 Ga0496111_0023246
492 Ga0496111_0032479
493 Ga0496112_0002522
494 Ga0496113_0038210
495 Ga0496114_0061448
496 Ga0496119_0021455
497 Ga0496120_0045257
498 Ga0496124_0001495
499 Ga0496125_0019105
500 Ga0496126_0112429
501 Ga0501034_0073705
502 Ga0501041_0043633
503 Ga0501043_0025731
504 Ga0501047_0002738
505 Ga0501047_0027573
506 Ga0501047_0041287
507 Ga0501067_0015022
508 Ga0501068_0045986
509 Ga0501070_0003786
510 Ga0501073_0028142
511 Ga0501080_0002854
512 Ga0501080_0008916
513 Ga0501080_0037405
514 Ga0501080_0061375
515 Ga0501083_0001258
516 Ga0501044_0023175
517 Ga0501044_0096407
518 nmdc:mga03683_1665_c1
519 nmdc:mga00v17_7306_c1
520 nmdc:mga0yw44_800_c1
521 nmdc:mga06z11_14759_c1
522 nmdc:mga06z11_8779_c1
523 nmdc:mga05p37_9316_c1
524 nmdc:mga0qj67_16190_c1
525 nmdc:mga06r32_16827_c1
526 nmdc:mga06r32_83872_c1
527 nmdc:mga06r32_99549_c1
528 nmdc:mga0n895_38800_c1
529 nmdc:mga0a205_3087_c1
530 nmdc:mga0a205_3538_c1
531 nmdc:mga0sz30_440_c1
532 Ga0495601_0006835
533 Ga0495601_0008363
534 Ga0495601_0011870
535 Ga0495601_0058668
536 Ga0495619_0002741
537 Ga0495619_0004961
538 Ga0500651_0002443
539 Ga0500641_0000109
540 Ga0500641_0000545
541 Ga0500595_000794
542 Ga0500595_001200
543 Ga0500595_004161
544 Ga0500568_0012366
545 Ga0500604_0000410
546 Ga0500609_000133
547 2513589345
548 2513721221
549 2513889486
550 2524609721
551 2545677519
552 2617912963
553 2617917923
554 2793077932
555 2819241780
556 2824705428
557 2824755430
558 2824763714
559 2831429129
560 2831432725
561 2841960790
562 2844320626
563 2848695729
564 2848700844
565 2849662622
566 2874617573
567 2881672846
568 2885376300
569 2886631335
570 2888392534
571 2897808309
572 2903734606
573 2904716612
574 2906605717
575 2906633815
576 2908744016
577 2913939892
578 3005480697
579 3005600589
580 3005723410
581 641640432
582 642601022
583 642605933
584 643598185
585 8005661155
586 8056969295

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

340

474

0.97

PF03412

Peptidase_C39

Peptidase C39 family

60

191

0.97

PF00664

ABC_membrane

ABC transporter transmembrane region

216

330

0.89

PF00005

ABC_tran

ABC transporter

563

712

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6mpz-assembly3.cif.gz_C crystal structure of a double glycine motif protease from ams/pcat transporter in complex with the leader peptide 0.9713 1 133
3k8u-assembly1.cif.gz_A crystal structure of the peptidase domain of streptococcus coma, a bi-functional abc transporter involved in quorum sensing pathway 0.9377 6 134
3vx4-assembly1.cif.gz_A crystal structure of the nucleotide-binding domain of s. mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway 0.9301 448 682
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.9277 452 686
1mt0-assembly1.cif.gz_A atp-binding domain of hemolysin b from escherichia coli 0.9246 452 686
ID Description Score Start End Superfamily
4ry2B01 Alpha Beta;Alpha-Beta Complex;Cathepsin B; Chain A;Cysteine proteinases 0.94 10 140 3.90.70.10
af_A0A1D6Q2V7_231_304_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9388 448 517 3.40.50.300
af_P0AAG5_335_579_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.932 449 686 3.40.50.300
3vx4D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9309 449 683 3.40.50.300
af_P9WQJ1_326_578_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9307 448 686 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A6N8UUM8-F1-model_v4 ATP-binding cassette domain-containing protein 0.9829 469 686 GO:0005524
GO:0016887
GO:0034040
AF-A0A6N8UUM8-F1-model_v4 ATP-binding cassette domain-containing protein 0.9697 469 686 GO:0005524
GO:0016887
GO:0034040
AF-A0A3P6TE24-F1-model_v4 ABC transporter domain-containing protein 0.9382 471 640 GO:0005524
GO:0016020
GO:0016887
GO:0042626
AF-A0A3D5LPU7-F1-model_v4 deleted 0.9347 438 686
AF-A0A652JU67-F1-model_v4 ABC transporter ATP-binding protein 0.9341 444 685 GO:0005524
GO:0015421
GO:0016887
GO:0090374

Map