F389124

General Info

Members Datasets Scaffolds Average Seq Length
289 186 578 594

Family's Representative Sequence

Representative Sequence 3300007076|Ga0075435_100011704|Ga0075435_1000117049
Length 652
Sequence MSIEARARRASDSRFARAGTVAATRSATLTIARVPAARLIRTILRPSLPCARLCLLHTILPFMDKTATHVPHAHELPHEHHEELGFWRKYVFSTDHKVIGIQYAVTGLLFLLFGFCLMMLMRWQLAYPGKPIPLIGAWLGQSRAPMGIMLPEFYNQLGAMHGTIMVFLGVVPLAVGGFGNFVMPLQIGAPDMAFPKINMMSYWVYFIGGVVMLASFFPTTGAAQSGWTSYAPLSVITATSGQTFWLVGMIFLITSSLLGSINFITTIVQLRAKGLSYMRLPFFVWAQFVTSFLLLLAFPPLEAAGILQLMDKVAGTSFFLPSGLVISGKPLAVAGQGNPLLWQHLFWFLAHPEVYVLILPAMGIVSEIIANNTRKPLWGYKALVYSVVFLGFMSFIVWAHHMFMTGMGTVMSAFFQTTTMIISIPSVVILTALLLSLWGASIRFTTPMLFSLAFLPMFGIGGLTGLPLGLAPSDIHLHDTYYVIGHFHYVVAPGTIFALFAGVYYWFPKATGRTMNELLGKLHFWGSLVCINLVFMPMFVQGLAGMNRRMYDGGAQYAHNQTVLHWNVVQGYAAWGLGLFQLFFIINFFMSIKWGKVVDKNPWEATTLEWSAPSPPGHGNFLTEPIVYRGPYEYSVPGAPRDFTPQFEPEKA

Samples

Sample ID Description Type Environment
1 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
103 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
104 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
105 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
106 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
107 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
108 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
109 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
110 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
111 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
112 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
113 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
114 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
115 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
116 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
117 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
118 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
119 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
120 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
121 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
122 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
123 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
124 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
125 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
126 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
127 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
128 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
129 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
130 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
131 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
132 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
133 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
134 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
135 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
136 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
137 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
138 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
141 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
142 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
143 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
144 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
145 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
146 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
147 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
148 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
149 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
150 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
151 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
152 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
153 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
154 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
155 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
156 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
157 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
158 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
159 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
160 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
161 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
162 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
163 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
164 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
169 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
170 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
171 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
172 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
173 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
174 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
177 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
178 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
179 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
180 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
181 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
182 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
183 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
184 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
185 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
186 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 99.65
Metatranscriptomes 0
Isolates 0.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.35
Nodule 0
Rhizoplane 1.04
Rhizosphere 97.92
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075435_100011704 3300007076 Bacteria 6469
2 JGI24751J29686_10002601 3300002459 Bacteria 3625
3 rootH2_10022746 3300003320 Bacteria 6150
4 Ga0065715_10089988 3300005293 Bacteria 7959
5 Ga0065707_10085132 3300005295 Bacteria 6426
6 Ga0070690_100004670 3300005330 Bacteria 7633
7 Ga0070690_100022834 3300005330 Bacteria 3831
8 Ga0070670_100019345 3300005331 Bacteria 5842
9 Ga0070670_100032321 3300005331 Bacteria 4507
10 Ga0070670_100047786 3300005331 Bacteria 3683
11 Ga0068869_100002584 3300005334 Bacteria 10930
12 Ga0070680_100064975 3300005336 Bacteria 2991
13 Ga0070682_100000003 3300005337 Bacteria 469319
14 Ga0068868_100141839 3300005338 Bacteria 1973
15 Ga0070689_100045154 3300005340 Bacteria 3392
16 Ga0070691_10001728 3300005341 Bacteria 9485
17 Ga0070661_100000793 3300005344 Bacteria 22700
18 Ga0070669_100019713 3300005353 Bacteria 4818
19 Ga0070675_100001537 3300005354 Bacteria 17074
20 Ga0070675_100006842 3300005354 Bacteria 8757
21 Ga0070675_100053483 3300005354 Bacteria 3321
22 Ga0070671_100064104 3300005355 Bacteria 3061
23 Ga0070674_100008194 3300005356 Bacteria 6205
24 Ga0070673_100027338 3300005364 Bacteria 4228
25 Ga0070688_100000591 3300005365 Bacteria 18259
26 Ga0070688_100037195 3300005365 Bacteria 2965
27 Ga0070703_10012084 3300005406 Bacteria 2445
28 Ga0070714_100016015 3300005435 Bacteria 6044
29 Ga0070701_10030718 3300005438 Bacteria 2660
30 Ga0070694_100002597 3300005444 Bacteria 10676
31 Ga0070694_100002781 3300005444 Bacteria 10387
32 Ga0070681_10123352 3300005458 Bacteria 2523
33 Ga0068867_100000472 3300005459 Bacteria 26720
34 Ga0070706_100106554 3300005467 Bacteria 2608
35 Ga0070698_100018061 3300005471 Bacteria 7426
36 Ga0070698_100026990 3300005471 Bacteria 5972
37 Ga0070679_100015797 3300005530 Bacteria 7262
38 Ga0070679_100017287 3300005530 Bacteria 6979
39 Ga0070672_100000166 3300005543 Bacteria 36328
40 Ga0070686_100032361 3300005544 Bacteria 3206
41 Ga0070695_100003699 3300005545 Bacteria 8913
42 Ga0070665_100008701 3300005548 Bacteria 10272
43 Ga0070704_100024505 3300005549 Bacteria 3960
44 Ga0070704_100055655 3300005549 Bacteria 2805
45 Ga0068855_100023932 3300005563 Bacteria 7314
46 Ga0068855_100054131 3300005563 Bacteria 4717
47 Ga0070664_100001790 3300005564 Bacteria 17237
48 Ga0068857_100122870 3300005577 Bacteria 2339
49 Ga0068856_100008624 3300005614 Bacteria 9916
50 Ga0068856_100019263 3300005614 Bacteria 6624
51 Ga0068859_100003032 3300005617 Bacteria 17025
52 Ga0068859_100012409 3300005617 Bacteria 8572
53 Ga0068859_100157528 3300005617 Bacteria 2349
54 Ga0068864_100076036 3300005618 Bacteria 2933
55 Ga0068870_10019477 3300005840 Bacteria 3291
56 Ga0068858_100040173 3300005842 Bacteria 4337
57 Ga0068860_100077119 3300005843 Bacteria 3169
58 Ga0068860_100116373 3300005843 Bacteria 2558
59 Ga0081455_10042166 3300005937 Bacteria 4006
60 Ga0081539_10013378 3300005985 Bacteria 6187
61 Ga0097621_100034502 3300006237 Bacteria 4037
62 Ga0068871_100025964 3300006358 Bacteria 4565
63 Ga0068871_100043722 3300006358 Bacteria 3599
64 Ga0075428_100000005 3300006844 Bacteria 326130
65 Ga0075433_10003922 3300006852 Bacteria 11519
66 Ga0075433_10004207 3300006852 Bacteria 11171
67 Ga0075434_100005302 3300006871 Bacteria 11729
68 Ga0075434_100020736 3300006871 Bacteria 6378
69 Ga0075434_100021223 3300006871 Bacteria 6312
70 Ga0075434_100029205 3300006871 Bacteria 5422
71 Ga0075434_100169851 3300006871 Bacteria 2201
72 Ga0075429_100047105 3300006880 Bacteria 3751
73 Ga0075436_100010393 3300006914 Bacteria 6379
74 Ga0075436_100047052 3300006914 Bacteria 2975
75 Ga0075436_100058218 3300006914 Bacteria 2668
76 Ga0075436_100081664 3300006914 Bacteria 2241
77 Ga0097620_100003032 3300006931 Bacteria 17025
78 Ga0097620_100012412 3300006931 Bacteria 8572
79 Ga0097620_100157533 3300006931 Bacteria 2349
80 Ga0075435_100001499 3300007076 Bacteria 14991
81 Ga0075435_100022377 3300007076 Bacteria 4877
82 Ga0105240_10015886 3300009093 Bacteria 10212
83 Ga0111539_10000008 3300009094 Bacteria 382609
84 Ga0111539_10002317 3300009094 Bacteria 25338
85 Ga0111539_10005974 3300009094 Bacteria 15726
86 Ga0111539_10008236 3300009094 Bacteria 13270
87 Ga0111539_10013059 3300009094 Bacteria 10392
88 Ga0114129_10001435 3300009147 Bacteria 32173
89 Ga0114129_10021065 3300009147 Bacteria 9258
90 Ga0114129_10045015 3300009147 Bacteria 6206
91 Ga0114129_10045281 3300009147 Bacteria 6185
92 Ga0105243_10000718 3300009148 Bacteria 31800
93 Ga0105242_10113859 3300009176 Bacteria 2310
94 Ga0105248_10006216 3300009177 Bacteria 13093
95 Ga0105248_10030747 3300009177 Bacteria 5998
96 Ga0105248_10032706 3300009177 Bacteria 5809
97 Ga0105248_10099447 3300009177 Bacteria 3278
98 Ga0105248_10134937 3300009177 Bacteria 2784
99 Ga0105238_10037150 3300009551 Bacteria 4952
100 Ga0157373_10000263 3300013100 Bacteria 42737
101 Ga0157370_10000884 3300013104 Bacteria 38109
102 Ga0157370_10013014 3300013104 Bacteria 8594
103 Ga0157374_10076919 3300013296 Bacteria 3157
104 Ga0157372_10100206 3300013307 Bacteria 3306
105 Ga0157375_10000037 3300013308 Bacteria 176523
106 Ga0157375_10186284 3300013308 Bacteria 2229
107 Ga0163163_10004547 3300014325 Bacteria 11847
108 Ga0163163_10029543 3300014325 Bacteria 5274
109 Ga0157380_10002694 3300014326 Bacteria 12041
110 Ga0157379_10008200 3300014968 Bacteria 9072
111 Ga0157379_10043440 3300014968 Bacteria 4012
112 Ga0157376_10006373 3300014969 Bacteria 8334
113 Ga0207682_10012967 3300025893 Bacteria 3250
114 Ga0207705_10000921 3300025909 Bacteria 24094
115 Ga0207657_10034229 3300025919 Bacteria 4571
116 Ga0207649_10009771 3300025920 Bacteria 5256
117 Ga0207652_10041513 3300025921 Bacteria 3911
118 Ga0207646_10117995 3300025922 Bacteria 2383
119 Ga0207681_10007304 3300025923 Bacteria 6770
120 Ga0207681_10043487 3300025923 Bacteria 3006
121 Ga0207694_10007075 3300025924 Bacteria 8522
122 Ga0207650_10027153 3300025925 Bacteria 4094
123 Ga0207659_10000585 3300025926 Bacteria 21814
124 Ga0207659_10001294 3300025926 Bacteria 14955
125 Ga0207700_10015627 3300025928 Bacteria 5015
126 Ga0207709_10000492 3300025935 Bacteria 35691
127 Ga0207670_10035637 3300025936 Bacteria 3228
128 Ga0207670_10045503 3300025936 Bacteria 2910
129 Ga0207669_10008545 3300025937 Bacteria 4814
130 Ga0207669_10020223 3300025937 Bacteria 3485
131 Ga0207669_10026481 3300025937 Bacteria 3155
132 Ga0207669_10045583 3300025937 Bacteria 2584
133 Ga0207704_10003262 3300025938 Bacteria 7360
134 Ga0207691_10000888 3300025940 Bacteria 29662
135 Ga0207711_10040651 3300025941 Bacteria 3956
136 Ga0207689_10005502 3300025942 Bacteria 11327
137 Ga0207679_10012986 3300025945 Bacteria 5449
138 Ga0207667_10016368 3300025949 Bacteria 8382
139 Ga0207667_10073060 3300025949 Bacteria 3564
140 Ga0207651_10021495 3300025960 Bacteria 3923
141 Ga0207712_10044718 3300025961 Bacteria 3062
142 Ga0207712_10105996 3300025961 Bacteria 2099
143 Ga0207703_10002242 3300026035 Bacteria 16903
144 Ga0207702_10006514 3300026078 Bacteria 10044
145 Ga0207702_10045545 3300026078 Bacteria 3690
146 Ga0207702_10055803 3300026078 Bacteria 3351
147 Ga0207641_10002008 3300026088 Bacteria 19393
148 Ga0207648_10001380 3300026089 Bacteria 26758
149 Ga0207674_10044568 3300026116 Bacteria 4568
150 Ga0207675_100015362 3300026118 Bacteria 7141
151 Ga0207675_100065242 3300026118 Bacteria 3403
152 Ga0207428_10000019 3300027907 Bacteria 276945
153 Ga0207428_10005616 3300027907 Bacteria 11662
154 Ga0207428_10009116 3300027907 Bacteria 8917
155 Ga0207428_10020412 3300027907 Bacteria 5630
156 Ga0207428_10110473 3300027907 Bacteria 2117
157 Ga0268266_10006329 3300028379 Bacteria 10851
158 Ga0268266_10078733 3300028379 Bacteria 2869
159 Ga0268265_10045077 3300028380 Bacteria 3288
160 Ga0268264_10119767 3300028381 Bacteria 2318
161 Ga0265337_1000867 3300028556 Bacteria 15899
162 Ga0265337_1001349 3300028556 Bacteria 12144
163 Ga0265337_1003306 3300028556 Bacteria 7037
164 Ga0265334_10007443 3300028573 Bacteria 4697
165 Ga0265334_10011367 3300028573 Bacteria 3749
166 Ga0265336_10000332 3300028666 Bacteria 31362
167 Ga0265338_10001058 3300028800 Bacteria 45770
168 Ga0265338_10001604 3300028800 Bacteria 36305
169 Ga0265338_10002196 3300028800 Bacteria 29896
170 Ga0265338_10003172 3300028800 Bacteria 23470
171 Ga0265338_10004948 3300028800 Bacteria 17660
172 Ga0265338_10014176 3300028800 Bacteria 8906
173 Ga0265338_10036373 3300028800 Bacteria 4714
174 Ga0265338_10038117 3300028800 Bacteria 4559
175 Ga0265320_10000414 3300031240 Bacteria 33864
176 Ga0265325_10022700 3300031241 Bacteria 3434
177 Ga0265340_10052802 3300031247 Bacteria 1964
178 Ga0265331_10012883 3300031250 Bacteria 4511
179 Ga0265327_10001681 3300031251 Bacteria 26505
180 Ga0265327_10001797 3300031251 Bacteria 25176
181 Ga0265316_10010749 3300031344 Bacteria 8315
182 Ga0307408_100000110 3300031548 Bacteria 91157
183 Ga0307408_100001892 3300031548 Bacteria 15228
184 Ga0307406_10000152 3300031901 Bacteria 41038
185 Ga0307407_10000182 3300031903 Bacteria 18918
186 Ga0307412_10000040 3300031911 Bacteria 182923
187 Ga0307416_100021421 3300032002 Bacteria 4639
188 Ga0307414_10000029 3300032004 Bacteria 191305
189 Ga0307414_10065764 3300032004 Bacteria 2588
190 Ga0307414_10081601 3300032004 Bacteria 2368
191 Ga0373950_0000159 3300034818 Bacteria 9864
192 Ga0373928_0001561 3300035084 Bacteria 4444
193 Ga0373951_0001237 3300035091 Bacteria 6766
194 Ga0373932_0000001 3300035112 Bacteria 1459067
195 Ga0373932_0001647 3300035112 Bacteria 6119
196 Ga0373939_0000518 3300035114 Bacteria 9713
197 Ga0373941_0004542 3300035115 Bacteria 3215
198 Ga0373960_0008392 3300035121 Bacteria 2474
199 Ga0373962_0000046 3300035242 Bacteria 28367
200 Ga0373962_0001536 3300035242 Bacteria 5460
201 Ga0373924_0030812 3300035410 Bacteria 2152
202 Ga0373931_0000004 3300035691 Bacteria 535140
203 Ga0373931_0004272 3300035691 Bacteria 6506
204 Ga0373935_0010301 3300035692 Bacteria 5606
205 Ga0373927_0004481 3300035695 Bacteria 9774
206 Ga0373927_0028990 3300035695 Bacteria 3609
207 Ga0373947_0002964 3300035725 Bacteria 10127
208 Ga0373925_0000397 3300037068 Bacteria 44579
209 Ga0373925_0001908 3300037068 Bacteria 17300
210 Ga0436365_1020827 3300039437 Bacteria 1857
211 Ga0439453_0000023 3300041408 Bacteria 9641
212 Ga0450890_000045 3300042127 Bacteria 27203
213 Ga0450892_000020 3300042130 Bacteria 17013
214 Ga0439434_0011849 3300042435 Bacteria 2578
215 Ga0450893_0001253 3300042532 Bacteria 3837
216 Ga0453684_0164482 3300044712 Bacteria 2621
217 Ga0451576_0006845 3300045051 Bacteria 13828
218 Ga0495592_0051583 3300046454 Bacteria 3056
219 Ga0495629_0004040 3300046459 Bacteria 11030
220 Ga0495582_0003788 3300046473 Bacteria 8521
221 Ga0495582_0031030 3300046473 Bacteria 2937
222 Ga0495594_0005494 3300046499 Bacteria 6510
223 Ga0495594_0083263 3300046499 Bacteria 1788
224 Ga0495628_0028151 3300046516 Bacteria 4569
225 Ga0495630_0003631 3300046517 Bacteria 10756
226 Ga0495666_0005304 3300046526 Bacteria 6499
227 Ga0495652_0095036 3300046529 Bacteria 2430
228 Ga0495640_0042637 3300046533 Bacteria 3164
229 Ga0495587_0058146 3300046536 Bacteria 2272
230 Ga0495645_0006058 3300046543 Bacteria 8362
231 Ga0495645_0010834 3300046543 Bacteria 6405
232 Ga0495667_0032713 3300046559 Bacteria 3483
233 Ga0495634_0059086 3300046642 Bacteria 2555
234 Ga0495635_0001654 3300046663 Bacteria 15027
235 Ga0495635_0045575 3300046663 Bacteria 3026
236 Ga0495588_0017084 3300046674 Bacteria 3517
237 Ga0495599_0012845 3300046678 Bacteria 5169
238 Ga0495599_0028225 3300046678 Bacteria 3517
239 Ga0495658_0000016 3300046683 Bacteria 94726
240 Ga0495658_0009115 3300046683 Bacteria 4934
241 Ga0495669_0026902 3300046684 Bacteria 2514
242 Ga0495613_0000927 3300046689 Bacteria 22499
243 Ga0495613_0006036 3300046689 Bacteria 9063
244 Ga0495600_0053132 3300046809 Bacteria 2646
245 Ga0495581_0000713 3300047315 Bacteria 17511
246 Ga0495684_0000048 3300047471 Bacteria 89243
247 Ga0495602_0095089 3300048088 Bacteria 2461
248 Ga0495614_0005237 3300048089 Bacteria 5850
249 Ga0496109_0056363 3300048912 Bacteria 3587
250 Ga0496112_0009087 3300048915 Bacteria 8929
251 Ga0501032_0025118 3300049569 Bacteria 4108
252 Ga0501033_0001055 3300049570 Bacteria 25173
253 Ga0501072_0015247 3300049588 Bacteria 5891
254 Ga0501075_0023531 3300049591 Bacteria 4512
255 Ga0501076_0014037 3300049592 Bacteria 6021
256 Ga0501223_004832 3300049663 Bacteria 2863
257 Ga0501080_0094075 3300049742 Bacteria 2783
258 Ga0501083_0071885 3300049744 Bacteria 2300
259 Ga0501083_0095459 3300049744 Bacteria 1962
260 Ga0501035_0005518 3300049822 Bacteria 11953
261 Ga0501044_0000767 3300049823 Bacteria 38872
262 Ga0501045_0087972 3300049824 Bacteria 2294
263 nmdc:mga05p37_11606_c1 3300050507 Bacteria 10499
264 nmdc:mga05p37_16703_c1 3300050507 Bacteria 8845
265 nmdc:mga05p37_191239_c1 3300050507 Bacteria 2484
266 nmdc:mga05p37_19636_c1 3300050507 Bacteria 8174
267 nmdc:mga05p37_22241_c1 3300050507 Bacteria 7687
268 nmdc:mga05p37_22359_c1 3300050507 Bacteria 7671
269 nmdc:mga05p37_29063_c1 3300050507 Bacteria 6746
270 nmdc:mga05p37_31186_c1 3300050507 Bacteria 6511
271 nmdc:mga05p37_9103_c1 3300050507 Bacteria 11737
272 nmdc:mga09592_67932_c1 3300050508 Bacteria 3023
273 nmdc:mga08y16_1071_c1 3300050511 Bacteria 26933
274 nmdc:mga08y16_17_c1 3300050511 Bacteria 382598
275 nmdc:mga08y16_188585_c1 3300050511 Bacteria 2139
276 nmdc:mga08y16_6943_c1 3300050511 Bacteria 11869
277 nmdc:mga08y16_7157_c1 3300050511 Bacteria 11711
278 nmdc:mga0n895_21226_c1 3300050512 Bacteria 6068
279 nmdc:mga0n895_24566_c1 3300050512 Bacteria 5681
280 nmdc:mga0rr50_109_c1 3300050513 Bacteria 46163
281 nmdc:mga08x19_34170_c1 3300050514 Bacteria 3213
282 nmdc:mga08x19_54655_c1 3300050514 Bacteria 2571
283 nmdc:mga08x19_65294_c1 3300050514 Bacteria 2363
284 nmdc:mga0a205_2484_c1 3300050515 Bacteria 16260
285 nmdc:mga0a205_44544_c1 3300050515 Bacteria 4278
286 Ga0495619_0001383 3300053085 Bacteria 15958
287 Ga0495619_0001582 3300053085 Bacteria 14969
288 Ga0500559_0002413 3300053136 Bacteria 9683
289 2787435272 2786546517 Bacteria 6614109
290 Ga0075435_100011704
291 JGI24751J29686_10002601
292 rootH2_10022746
293 Ga0065715_10089988
294 Ga0065707_10085132
295 Ga0070690_100004670
296 Ga0070690_100022834
297 Ga0070670_100019345
298 Ga0070670_100032321
299 Ga0070670_100047786
300 Ga0068869_100002584
301 Ga0070680_100064975
302 Ga0070682_100000003
303 Ga0068868_100141839
304 Ga0070689_100045154
305 Ga0070691_10001728
306 Ga0070661_100000793
307 Ga0070669_100019713
308 Ga0070675_100001537
309 Ga0070675_100006842
310 Ga0070675_100053483
311 Ga0070671_100064104
312 Ga0070674_100008194
313 Ga0070673_100027338
314 Ga0070688_100000591
315 Ga0070688_100037195
316 Ga0070703_10012084
317 Ga0070714_100016015
318 Ga0070701_10030718
319 Ga0070694_100002597
320 Ga0070694_100002781
321 Ga0070681_10123352
322 Ga0068867_100000472
323 Ga0070706_100106554
324 Ga0070698_100018061
325 Ga0070698_100026990
326 Ga0070679_100015797
327 Ga0070679_100017287
328 Ga0070672_100000166
329 Ga0070686_100032361
330 Ga0070695_100003699
331 Ga0070665_100008701
332 Ga0070704_100024505
333 Ga0070704_100055655
334 Ga0068855_100023932
335 Ga0068855_100054131
336 Ga0070664_100001790
337 Ga0068857_100122870
338 Ga0068856_100008624
339 Ga0068856_100019263
340 Ga0068859_100003032
341 Ga0068859_100012409
342 Ga0068859_100157528
343 Ga0068864_100076036
344 Ga0068870_10019477
345 Ga0068858_100040173
346 Ga0068860_100077119
347 Ga0068860_100116373
348 Ga0081455_10042166
349 Ga0081539_10013378
350 Ga0097621_100034502
351 Ga0068871_100025964
352 Ga0068871_100043722
353 Ga0075428_100000005
354 Ga0075433_10003922
355 Ga0075433_10004207
356 Ga0075434_100005302
357 Ga0075434_100020736
358 Ga0075434_100021223
359 Ga0075434_100029205
360 Ga0075434_100169851
361 Ga0075429_100047105
362 Ga0075436_100010393
363 Ga0075436_100047052
364 Ga0075436_100058218
365 Ga0075436_100081664
366 Ga0097620_100003032
367 Ga0097620_100012412
368 Ga0097620_100157533
369 Ga0075435_100001499
370 Ga0075435_100022377
371 Ga0105240_10015886
372 Ga0111539_10000008
373 Ga0111539_10002317
374 Ga0111539_10005974
375 Ga0111539_10008236
376 Ga0111539_10013059
377 Ga0114129_10001435
378 Ga0114129_10021065
379 Ga0114129_10045015
380 Ga0114129_10045281
381 Ga0105243_10000718
382 Ga0105242_10113859
383 Ga0105248_10006216
384 Ga0105248_10030747
385 Ga0105248_10032706
386 Ga0105248_10099447
387 Ga0105248_10134937
388 Ga0105238_10037150
389 Ga0157373_10000263
390 Ga0157370_10000884
391 Ga0157370_10013014
392 Ga0157374_10076919
393 Ga0157372_10100206
394 Ga0157375_10000037
395 Ga0157375_10186284
396 Ga0163163_10004547
397 Ga0163163_10029543
398 Ga0157380_10002694
399 Ga0157379_10008200
400 Ga0157379_10043440
401 Ga0157376_10006373
402 Ga0207682_10012967
403 Ga0207705_10000921
404 Ga0207657_10034229
405 Ga0207649_10009771
406 Ga0207652_10041513
407 Ga0207646_10117995
408 Ga0207681_10007304
409 Ga0207681_10043487
410 Ga0207694_10007075
411 Ga0207650_10027153
412 Ga0207659_10000585
413 Ga0207659_10001294
414 Ga0207700_10015627
415 Ga0207709_10000492
416 Ga0207670_10035637
417 Ga0207670_10045503
418 Ga0207669_10008545
419 Ga0207669_10020223
420 Ga0207669_10026481
421 Ga0207669_10045583
422 Ga0207704_10003262
423 Ga0207691_10000888
424 Ga0207711_10040651
425 Ga0207689_10005502
426 Ga0207679_10012986
427 Ga0207667_10016368
428 Ga0207667_10073060
429 Ga0207651_10021495
430 Ga0207712_10044718
431 Ga0207712_10105996
432 Ga0207703_10002242
433 Ga0207702_10006514
434 Ga0207702_10045545
435 Ga0207702_10055803
436 Ga0207641_10002008
437 Ga0207648_10001380
438 Ga0207674_10044568
439 Ga0207675_100015362
440 Ga0207675_100065242
441 Ga0207428_10000019
442 Ga0207428_10005616
443 Ga0207428_10009116
444 Ga0207428_10020412
445 Ga0207428_10110473
446 Ga0268266_10006329
447 Ga0268266_10078733
448 Ga0268265_10045077
449 Ga0268264_10119767
450 Ga0265337_1000867
451 Ga0265337_1001349
452 Ga0265337_1003306
453 Ga0265334_10007443
454 Ga0265334_10011367
455 Ga0265336_10000332
456 Ga0265338_10001058
457 Ga0265338_10001604
458 Ga0265338_10002196
459 Ga0265338_10003172
460 Ga0265338_10004948
461 Ga0265338_10014176
462 Ga0265338_10036373
463 Ga0265338_10038117
464 Ga0265320_10000414
465 Ga0265325_10022700
466 Ga0265340_10052802
467 Ga0265331_10012883
468 Ga0265327_10001681
469 Ga0265327_10001797
470 Ga0265316_10010749
471 Ga0307408_100000110
472 Ga0307408_100001892
473 Ga0307406_10000152
474 Ga0307407_10000182
475 Ga0307412_10000040
476 Ga0307416_100021421
477 Ga0307414_10000029
478 Ga0307414_10065764
479 Ga0307414_10081601
480 Ga0373950_0000159
481 Ga0373928_0001561
482 Ga0373951_0001237
483 Ga0373932_0000001
484 Ga0373932_0001647
485 Ga0373939_0000518
486 Ga0373941_0004542
487 Ga0373960_0008392
488 Ga0373962_0000046
489 Ga0373962_0001536
490 Ga0373924_0030812
491 Ga0373931_0000004
492 Ga0373931_0004272
493 Ga0373935_0010301
494 Ga0373927_0004481
495 Ga0373927_0028990
496 Ga0373947_0002964
497 Ga0373925_0000397
498 Ga0373925_0001908
499 Ga0436365_1020827
500 Ga0439453_0000023
501 Ga0450890_000045
502 Ga0450892_000020
503 Ga0439434_0011849
504 Ga0450893_0001253
505 Ga0453684_0164482
506 Ga0451576_0006845
507 Ga0495592_0051583
508 Ga0495629_0004040
509 Ga0495582_0003788
510 Ga0495582_0031030
511 Ga0495594_0005494
512 Ga0495594_0083263
513 Ga0495628_0028151
514 Ga0495630_0003631
515 Ga0495666_0005304
516 Ga0495652_0095036
517 Ga0495640_0042637
518 Ga0495587_0058146
519 Ga0495645_0006058
520 Ga0495645_0010834
521 Ga0495667_0032713
522 Ga0495634_0059086
523 Ga0495635_0001654
524 Ga0495635_0045575
525 Ga0495588_0017084
526 Ga0495599_0012845
527 Ga0495599_0028225
528 Ga0495658_0000016
529 Ga0495658_0009115
530 Ga0495669_0026902
531 Ga0495613_0000927
532 Ga0495613_0006036
533 Ga0495600_0053132
534 Ga0495581_0000713
535 Ga0495684_0000048
536 Ga0495602_0095089
537 Ga0495614_0005237
538 Ga0496109_0056363
539 Ga0496112_0009087
540 Ga0501032_0025118
541 Ga0501033_0001055
542 Ga0501072_0015247
543 Ga0501075_0023531
544 Ga0501076_0014037
545 Ga0501223_004832
546 Ga0501080_0094075
547 Ga0501083_0071885
548 Ga0501083_0095459
549 Ga0501035_0005518
550 Ga0501044_0000767
551 Ga0501045_0087972
552 nmdc:mga05p37_11606_c1
553 nmdc:mga05p37_16703_c1
554 nmdc:mga05p37_191239_c1
555 nmdc:mga05p37_19636_c1
556 nmdc:mga05p37_22241_c1
557 nmdc:mga05p37_22359_c1
558 nmdc:mga05p37_29063_c1
559 nmdc:mga05p37_31186_c1
560 nmdc:mga05p37_9103_c1
561 nmdc:mga09592_67932_c1
562 nmdc:mga08y16_1071_c1
563 nmdc:mga08y16_17_c1
564 nmdc:mga08y16_188585_c1
565 nmdc:mga08y16_6943_c1
566 nmdc:mga08y16_7157_c1
567 nmdc:mga0n895_21226_c1
568 nmdc:mga0n895_24566_c1
569 nmdc:mga0rr50_109_c1
570 nmdc:mga08x19_34170_c1
571 nmdc:mga08x19_54655_c1
572 nmdc:mga08x19_65294_c1
573 nmdc:mga0a205_2484_c1
574 nmdc:mga0a205_44544_c1
575 Ga0495619_0001383
576 Ga0495619_0001582
577 Ga0500559_0002413
578 2787435272

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00115

COX1

Cytochrome C and Quinol oxidase polypeptide I

98

579

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
8d4t-assembly1.cif.gz_N mammalian civ with gdn bound 0.9443 12 549
7o3e-assembly1.cif.gz_a murine supercomplex ciii2civ in the intermediate locked conformation 0.9377 12 549
3abk-assembly1.cif.gz_A bovine heart cytochrome c oxidase at the no-bound fully reduced state (50k) 0.9372 12 555
7vuw-assembly2.cif.gz_N bovine heart cytochrome c oxidase in the cyanide-bound fully oxidized state at 50 k 0.9369 12 546
2yev-assembly2.cif.gz_A structure of caa3-type cytochrome oxidase 0.9338 20 574
ID Description Score Start End Superfamily
af_Q2FZK0_30_556_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.944 14 552 1.20.210.10
af_Q9ZZX1_1_342_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9403 14 366 1.20.210.10
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9376 14 574 1.20.210.10
af_P9WP71_20_544_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.931 8 552 1.20.210.10
af_Q7HP04_41_512_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9296 20 511 1.20.210.10
ID Description Score Start End GO Terms
AF-A0A382KYF1-F1-model_v4 Cytochrome oxidase subunit I profile domain-containing protein 0.9715 8 321 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904
AF-A0A1F2QTE5-F1-model_v4 Cytochrome C oxidase subunit I 0.9705 9 577 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904
AF-A0A1F2SXK0-F1-model_v4 Cytochrome C oxidase subunit I 0.9684 16 579 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904
AF-A0A1G1IMD9-F1-model_v4 Cytochrome C oxidase subunit I 0.9672 5 444 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904
AF-A0A2A2R2H5-F1-model_v4 Cytochrome C oxidase subunit I 0.9646 5 579 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904

Map