F387509

General Info

Members Datasets Scaffolds Average Seq Length
286 173 572 345

Family's Representative Sequence

Representative Sequence 3300033180|Ga0307510_10203260|Ga0307510_102032602
Length 332
Sequence MTDRLTLRRPDDWHVHLRDGAMLDAVVAHTARQFARAIVMPNLTPPVTTVAAAEAYRARILAALPAGGDFTPLMTCYLTDGADPAEILRGHESGAFTACKLYPAHATTNSAHGVTDIRALGAVLETMQRIGMPLLIHGEVTDRDVDIFTLAPLVRDFPALKIVLEHITTAEAAEFVADAGPLVAATITPQHLHLNRNALFDGGLRPHAYCLPVIKRERHRLAVRAAAVSGSPKFFLGTDSAPHAVERKEMDCGCAGIFNAPFALESYAAVFEEEGALDKFEGFASEHGPRFYGLPLNEGTVTLERVAVEVPARVEGLVPFHAGETLGWRFVG

Samples

Sample ID Description Type Environment
1 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
8 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
62 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
104 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
105 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
106 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
107 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
108 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
109 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
110 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
111 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
112 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
113 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
114 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
121 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
122 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
125 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
126 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
127 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
128 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
129 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
130 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
131 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
132 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
133 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
134 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
135 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
138 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
139 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
140 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
145 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
146 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
147 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
148 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
149 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
150 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
151 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
152 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
161 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
162 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
163 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
164 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
165 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
166 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
167 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
168 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
169 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
170 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
171 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
172 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
173 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.5
Metatranscriptomes 0.35
Isolates 3.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.2
Nodule 0
Rhizoplane 7.69
Rhizosphere 80.42
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307510_10203260 3300033180 Bacteria 1513
2 SwRhRL2b_contig_2557718 2162886007 Bacteria 3275
3 LJQas_1004221 3300000549 Bacteria 1883
4 JGI24739J22299_10009892 3300001989 Bacteria 3545
5 JGI24737J22298_10011049 3300001990 Bacteria 2965
6 JGI24735J21928_10016801 3300002067 Bacteria 2265
7 JGI24738J21930_10001350 3300002075 Bacteria 6807
8 JGI24034J26672_10009593 3300002239 Bacteria 1430
9 Ga0065704_10080702 3300005289 Bacteria 3896
10 Ga0070658_10000179 3300005327 Bacteria 55511
11 Ga0070658_10004395 3300005327 Bacteria 11492
12 Ga0070683_100000209 3300005329 Bacteria 39666
13 Ga0070683_100227971 3300005329 Bacteria 1771
14 Ga0070677_10005215 3300005333 Bacteria 4275
15 Ga0070666_10002196 3300005335 Bacteria 11824
16 Ga0070680_100003048 3300005336 Bacteria 12441
17 Ga0070680_100010875 3300005336 Bacteria 7030
18 Ga0070680_100109530 3300005336 Bacteria 2298
19 Ga0070680_100198282 3300005336 Bacteria 1692
20 Ga0070660_100000496 3300005339 Bacteria 26199
21 Ga0070660_100009878 3300005339 Bacteria 6730
22 Ga0070660_100017527 3300005339 Bacteria 5223
23 Ga0070661_100000162 3300005344 Bacteria 54931
24 Ga0070661_100000509 3300005344 Bacteria 29863
25 Ga0070661_100023971 3300005344 Bacteria 4378
26 Ga0070661_100201945 3300005344 Bacteria 1519
27 Ga0070692_10001701 3300005345 Bacteria 8169
28 Ga0070668_100002363 3300005347 Bacteria 13868
29 Ga0070669_100000193 3300005353 Bacteria 53850
30 Ga0070675_100051454 3300005354 Bacteria 3385
31 Ga0070671_100009970 3300005355 Bacteria 7627
32 Ga0070671_100014229 3300005355 Bacteria 6425
33 Ga0070671_100027301 3300005355 Bacteria 4697
34 Ga0070671_100066315 3300005355 Bacteria 3008
35 Ga0070659_100000138 3300005366 Bacteria 56073
36 Ga0070659_100043630 3300005366 Bacteria 3507
37 Ga0070659_100282036 3300005366 Bacteria 1382
38 Ga0070667_100005828 3300005367 Bacteria 10276
39 Ga0070667_100017413 3300005367 Bacteria 5956
40 Ga0070667_100125868 3300005367 Bacteria 2233
41 Ga0070663_100002205 3300005455 Bacteria 10897
42 Ga0070662_100005377 3300005457 Bacteria 8178
43 Ga0070662_100016179 3300005457 Bacteria 5005
44 Ga0070662_100051930 3300005457 Bacteria 2962
45 Ga0070681_10083437 3300005458 Bacteria 3149
46 Ga0070679_100000001 3300005530 Bacteria 764811
47 Ga0070679_100026909 3300005530 Bacteria 5655
48 Ga0070679_100035261 3300005530 Bacteria 4963
49 Ga0070679_100051106 3300005530 Bacteria 4117
50 Ga0070679_100070909 3300005530 Bacteria 3475
51 Ga0070679_100104864 3300005530 Bacteria 2813
52 Ga0068853_100001329 3300005539 Bacteria 17794
53 Ga0070672_100013891 3300005543 Bacteria 5698
54 Ga0070696_100089725 3300005546 Bacteria 2186
55 Ga0070693_100000703 3300005547 Bacteria 14759
56 Ga0070665_100005560 3300005548 Bacteria 12965
57 Ga0070665_100008204 3300005548 Bacteria 10574
58 Ga0070665_100028368 3300005548 Bacteria 5639
59 Ga0068855_100000163 3300005563 Bacteria 85587
60 Ga0068855_100123831 3300005563 Bacteria 2957
61 Ga0070664_100000544 3300005564 Bacteria 28761
62 Ga0070664_100048153 3300005564 Bacteria 3602
63 Ga0068857_100058275 3300005577 Bacteria 3429
64 Ga0068854_100048327 3300005578 Bacteria 3035
65 Ga0068854_100082784 3300005578 Bacteria 2372
66 Ga0068856_100001006 3300005614 Bacteria 30001
67 Ga0068856_100060282 3300005614 Bacteria 3749
68 Ga0068852_100000502 3300005616 Bacteria 25705
69 Ga0068852_100013907 3300005616 Bacteria 6172
70 Ga0068864_100005333 3300005618 Bacteria 10533
71 Ga0068864_100010009 3300005618 Bacteria 7825
72 Ga0068864_100038052 3300005618 Bacteria 4107
73 Ga0068851_10022353 3300005834 Bacteria 3080
74 Ga0068863_100000005 3300005841 Bacteria 269757
75 Ga0068863_100075193 3300005841 Bacteria 3196
76 Ga0068863_100183485 3300005841 Bacteria 2009
77 Ga0068858_100002024 3300005842 Bacteria 20688
78 Ga0068860_100000028 3300005843 Bacteria 266461
79 Ga0068860_100025643 3300005843 Bacteria 5686
80 Ga0068862_100017716 3300005844 Bacteria 5928
81 Ga0068862_100140879 3300005844 Bacteria 2140
82 Ga0075366_10003089 3300006195 Bacteria 8695
83 Ga0075366_10111849 3300006195 Bacteria 1643
84 Ga0097621_100057008 3300006237 Bacteria 3193
85 Ga0097621_100244400 3300006237 Bacteria 1570
86 Ga0075370_10004734 3300006353 Bacteria 6652
87 Ga0075370_10008960 3300006353 Bacteria 5173
88 Ga0105250_10004660 3300009092 Bacteria 6273
89 Ga0105240_10020736 3300009093 Bacteria 8756
90 Ga0105247_10084823 3300009101 Bacteria 2002
91 Ga0105241_10315450 3300009174 Bacteria 1346
92 Ga0105248_10005569 3300009177 Bacteria 13842
93 Ga0105248_10056551 3300009177 Bacteria 4401
94 Ga0105248_10128638 3300009177 Bacteria 2857
95 Ga0105248_10158001 3300009177 Bacteria 2558
96 Ga0105237_10058276 3300009545 Bacteria 3866
97 Ga0105238_10100625 3300009551 Bacteria 2873
98 Ga0105238_10189207 3300009551 Bacteria 2035
99 Ga0157373_10008452 3300013100 Bacteria 7644
100 Ga0163163_10000338 3300014325 Bacteria 45226
101 Ga0163163_10028144 3300014325 Bacteria 5392
102 Ga0157379_10012489 3300014968 Bacteria 7417
103 Ga0206354_11537384 3300020081 Bacteria 2998
104 Ga0213873_10000031 3300021358 Bacteria 53215
105 Ga0213876_10000020 3300021384 Bacteria 268316
106 Ga0213876_10000378 3300021384 Bacteria 37851
107 Ga0209233_1011612 3300025261 Bacteria 2591
108 Ga0207696_1005679 3300025711 Bacteria 5142
109 Ga0207713_1039785 3300025735 Bacteria 1980
110 Ga0207680_10074627 3300025903 Bacteria 2112
111 Ga0207647_10017285 3300025904 Bacteria 4903
112 Ga0207705_10000002 3300025909 Bacteria 2046852
113 Ga0207705_10000260 3300025909 Bacteria 51366
114 Ga0207705_10018858 3300025909 Bacteria 4932
115 Ga0207705_10099363 3300025909 Bacteria 2139
116 Ga0207654_10216853 3300025911 Bacteria 1267
117 Ga0207671_10120394 3300025914 Bacteria 2006
118 Ga0207660_10005902 3300025917 Bacteria 7956
119 Ga0207660_10045934 3300025917 Bacteria 3080
120 Ga0207660_10151849 3300025917 Bacteria 1780
121 Ga0207660_10251494 3300025917 Bacteria 1395
122 Ga0207657_10000031 3300025919 Bacteria 132167
123 Ga0207657_10006383 3300025919 Bacteria 12243
124 Ga0207657_10027289 3300025919 Bacteria 5231
125 Ga0207657_10038265 3300025919 Bacteria 4273
126 Ga0207649_10000394 3300025920 Bacteria 32788
127 Ga0207649_10000396 3300025920 Bacteria 32769
128 Ga0207652_10000003 3300025921 Bacteria 502441
129 Ga0207652_10070344 3300025921 Bacteria 3039
130 Ga0207652_10077209 3300025921 Bacteria 2906
131 Ga0207652_10087872 3300025921 Bacteria 2726
132 Ga0207652_10244997 3300025921 Bacteria 1616
133 Ga0207652_10401024 3300025921 Bacteria 1237
134 Ga0207681_10000176 3300025923 Bacteria 52358
135 Ga0207644_10002537 3300025931 Bacteria 11747
136 Ga0207644_10005857 3300025931 Bacteria 8010
137 Ga0207644_10049194 3300025931 Bacteria 3017
138 Ga0207644_10059604 3300025931 Bacteria 2760
139 Ga0207690_10000382 3300025932 Bacteria 29300
140 Ga0207690_10051338 3300025932 Bacteria 2758
141 Ga0207690_10340257 3300025932 Bacteria 1184
142 Ga0207706_10000028 3300025933 Bacteria 149092
143 Ga0207706_10000475 3300025933 Bacteria 42955
144 Ga0207706_10082301 3300025933 Bacteria 2829
145 Ga0207691_10173141 3300025940 Bacteria 1889
146 Ga0207711_10000500 3300025941 Bacteria 40435
147 Ga0207711_10001375 3300025941 Bacteria 22908
148 Ga0207711_10020529 3300025941 Bacteria 5510
149 Ga0207711_10105867 3300025941 Bacteria 2495
150 Ga0207661_10193695 3300025944 Bacteria 1783
151 Ga0207661_10249233 3300025944 Bacteria 1578
152 Ga0207679_10000129 3300025945 Bacteria 61477
153 Ga0207667_10000357 3300025949 Bacteria 62034
154 Ga0207667_10369760 3300025949 Bacteria 1461
155 Ga0207668_10003524 3300025972 Bacteria 9194
156 Ga0207668_10222987 3300025972 Bacteria 1515
157 Ga0207640_10031599 3300025981 Bacteria 3273
158 Ga0207658_10002285 3300025986 Bacteria 14158
159 Ga0207658_10004048 3300025986 Bacteria 10243
160 Ga0207658_10036095 3300025986 Bacteria 3543
161 Ga0207703_10093564 3300026035 Bacteria 2532
162 Ga0207639_10000131 3300026041 Bacteria 54681
163 Ga0207678_10000740 3300026067 Bacteria 29953
164 Ga0207678_10025287 3300026067 Bacteria 5183
165 Ga0207702_10000247 3300026078 Bacteria 62873
166 Ga0207702_10062599 3300026078 Bacteria 3178
167 Ga0207702_10364235 3300026078 Bacteria 1386
168 Ga0207641_10000326 3300026088 Bacteria 58336
169 Ga0207641_10110431 3300026088 Bacteria 2436
170 Ga0207676_10008398 3300026095 Bacteria 7341
171 Ga0207676_10017890 3300026095 Bacteria 5143
172 Ga0207674_10000289 3300026116 Bacteria 63604
173 Ga0207674_10012168 3300026116 Bacteria 9633
174 Ga0209974_10011005 3300027876 Bacteria 3045
175 Ga0268266_10010263 3300028379 Bacteria 8200
176 Ga0268266_10010715 3300028379 Bacteria 7988
177 Ga0268266_10240517 3300028379 Bacteria 1671
178 Ga0268265_10127125 3300028380 Bacteria 2111
179 Ga0268264_10000066 3300028381 Bacteria 285125
180 Ga0268264_10078912 3300028381 Bacteria 2808
181 Ga0307408_100051681 3300031548 Bacteria 2961
182 Ga0307408_100314288 3300031548 Bacteria 1317
183 Ga0307405_10120689 3300031731 Bacteria 1793
184 Ga0307405_10350854 3300031731 Bacteria 1138
185 Ga0307413_10010033 3300031824 Bacteria 4566
186 Ga0307413_10205930 3300031824 Bacteria 1424
187 Ga0307410_10003819 3300031852 Bacteria 7656
188 Ga0307407_10004615 3300031903 Bacteria 5877
189 Ga0307409_100002843 3300031995 Bacteria 9157
190 Ga0307416_100043719 3300032002 Bacteria 3510
191 Ga0307414_10020826 3300032004 Bacteria 4096
192 Ga0307414_10114705 3300032004 Bacteria 2059
193 Ga0307414_10152371 3300032004 Bacteria 1825
194 Ga0307411_10011439 3300032005 Bacteria 4790
195 Ga0307411_10180093 3300032005 Bacteria 1603
196 Ga0307415_100018950 3300032126 Bacteria 4168
197 Ga0373954_0013710 3300035118 Bacteria 3612
198 Ga0373957_0036707 3300035120 Bacteria 1827
199 Ga0373955_0017242 3300035172 Bacteria 3570
200 Ga0316574_0029261 3300035398 Bacteria 3327
201 Ga0373931_0005757 3300035691 Bacteria 5757
202 Ga0373933_0089745 3300035724 Bacteria 1895
203 Ga0373937_0004086 3300036401 Bacteria 12375
204 Ga0316584_0040702 3300036712 Bacteria 3463
205 Ga0395899_0075855 3300037312 Bacteria 2455
206 Ga0395899_0191600 3300037312 Bacteria 1430
207 Ga0395900_0061137 3300037418 Bacteria 3874
208 Ga0395900_0094481 3300037418 Bacteria 3071
209 Ga0395900_0594868 3300037418 Bacteria 1047
210 Ga0395898_0010805 3300037466 Bacteria 9538
211 Ga0395898_0257543 3300037466 Bacteria 1664
212 Ga0395905_0070193 3300037471 Bacteria 3282
213 Ga0395905_0117823 3300037471 Bacteria 2496
214 Ga0395905_0187582 3300037471 Bacteria 1941
215 Ga0395905_0193281 3300037471 Bacteria 1908
216 Ga0395905_0259888 3300037471 Bacteria 1621
217 Ga0395901_0010013 3300038443 Bacteria 9610
218 Ga0395901_0194748 3300038443 Bacteria 2125
219 Ga0436365_0343272 3300039437 Bacteria 70160
220 Ga0436365_1302039 3300039437 Bacteria 91581
221 Ga0436362_0346086 3300039453 Bacteria 49085
222 Ga0439443_006081 3300042003 Bacteria 1639
223 Ga0451577_0464683 3300042876 Bacteria 1149
224 Ga0453684_0376343 3300044712 Bacteria 1595
225 Ga0466957_0120980 3300044842 Bacteria 1669
226 Ga0466958_0021618 3300045836 Bacteria 3762
227 Ga0466967_0037141 3300045976 Bacteria 4165
228 Ga0466967_0186175 3300045976 Bacteria 1960
229 Ga0495623_0031826 3300046679 Bacteria 3391
230 Ga0495669_0017334 3300046684 Bacteria 3090
231 Ga0495613_0001115 3300046689 Bacteria 20443
232 Ga0495602_0028280 3300048088 Bacteria 5368
233 Ga0496100_0029394 3300048903 Bacteria 3399
234 Ga0496100_0061192 3300048903 Bacteria 2480
235 Ga0496101_0119007 3300048904 Bacteria 1995
236 Ga0496101_0177949 3300048904 Bacteria 1637
237 Ga0496102_0000445 3300048905 Bacteria 47017
238 Ga0496102_0042681 3300048905 Bacteria 4110
239 Ga0496103_0000021 3300048906 Bacteria 229062
240 Ga0496104_0000131 3300048907 Bacteria 69658
241 Ga0496105_0000111 3300048908 Bacteria 55868
242 Ga0496106_0017372 3300048909 Bacteria 5324
243 Ga0496107_0001919 3300048910 Bacteria 13202
244 Ga0496107_0008085 3300048910 Bacteria 7264
245 Ga0496107_0049549 3300048910 Bacteria 3027
246 Ga0496107_0127414 3300048910 Bacteria 1878
247 Ga0496108_0007036 3300048911 Bacteria 9109
248 Ga0496109_0006003 3300048912 Bacteria 10202
249 Ga0496110_0012913 3300048913 Bacteria 6887
250 Ga0496111_0003769 3300048914 Bacteria 9441
251 Ga0496112_0005909 3300048915 Bacteria 10673
252 Ga0496112_0009196 3300048915 Bacteria 8879
253 Ga0496112_0030253 3300048915 Bacteria 5238
254 Ga0496113_0001810 3300048916 Bacteria 12139
255 Ga0496116_0119500 3300048919 Bacteria 1528
256 Ga0496117_0013284 3300048920 Bacteria 7195
257 Ga0496118_0082580 3300048921 Bacteria 2250
258 Ga0496119_0000339 3300048922 Bacteria 65402
259 Ga0496120_0000334 3300048923 Bacteria 78728
260 Ga0496122_0001206 3300048925 Bacteria 44057
261 Ga0496123_0000367 3300048926 Bacteria 84634
262 Ga0496124_0017839 3300048927 Bacteria 6671
263 Ga0496125_0011446 3300048928 Bacteria 8870
264 Ga0496126_0000367 3300048929 Bacteria 93102
265 Ga0501034_0165035 3300049571 Bacteria 2184
266 Ga0501074_0026641 3300049590 Bacteria 4192
267 Ga0501080_0056533 3300049742 Bacteria 3654
268 Ga0501044_0187941 3300049823 Bacteria 2030
269 nmdc:mga0k408_15552_c1 3300050493 Bacteria 4208
270 nmdc:mga0k408_58464_c1 3300050493 Bacteria 2239
271 nmdc:mga07m45_151208_c1 3300050496 Bacteria 1346
272 nmdc:mga07m45_19911_c1 3300050496 Bacteria 3640
273 nmdc:mga07m45_909_c1 3300050496 Bacteria 12934
274 Ga0495612_0046861 3300053078 Bacteria 1771
275 Ga0500559_0000010 3300053136 Bacteria 165569
276 Ga0500622_0000283 3300053156 Bacteria 51667
277 Ga0466962_0035555 3300061719 Bacteria 2385
278 2643948673 2643221588 Bacteria 3692460
279 2738711605 2738541275 Bacteria 4830863
280 2738850030 2738541301 Bacteria 4834102
281 2738865759 2738541304 Bacteria 4833665
282 2739298277 2738543022 Bacteria 4835059
283 2739359955 2738543033 Bacteria 4833336
284 2896255735 2896253425 Bacteria 3418029
285 2928103760 2928100450 Bacteria 4837635
286 2928961688 2928959182 Bacteria 4725774
287 Ga0307510_10203260
288 SwRhRL2b_contig_2557718
289 LJQas_1004221
290 JGI24739J22299_10009892
291 JGI24737J22298_10011049
292 JGI24735J21928_10016801
293 JGI24738J21930_10001350
294 JGI24034J26672_10009593
295 Ga0065704_10080702
296 Ga0070658_10000179
297 Ga0070658_10004395
298 Ga0070683_100000209
299 Ga0070683_100227971
300 Ga0070677_10005215
301 Ga0070666_10002196
302 Ga0070680_100003048
303 Ga0070680_100010875
304 Ga0070680_100109530
305 Ga0070680_100198282
306 Ga0070660_100000496
307 Ga0070660_100009878
308 Ga0070660_100017527
309 Ga0070661_100000162
310 Ga0070661_100000509
311 Ga0070661_100023971
312 Ga0070661_100201945
313 Ga0070692_10001701
314 Ga0070668_100002363
315 Ga0070669_100000193
316 Ga0070675_100051454
317 Ga0070671_100009970
318 Ga0070671_100014229
319 Ga0070671_100027301
320 Ga0070671_100066315
321 Ga0070659_100000138
322 Ga0070659_100043630
323 Ga0070659_100282036
324 Ga0070667_100005828
325 Ga0070667_100017413
326 Ga0070667_100125868
327 Ga0070663_100002205
328 Ga0070662_100005377
329 Ga0070662_100016179
330 Ga0070662_100051930
331 Ga0070681_10083437
332 Ga0070679_100000001
333 Ga0070679_100026909
334 Ga0070679_100035261
335 Ga0070679_100051106
336 Ga0070679_100070909
337 Ga0070679_100104864
338 Ga0068853_100001329
339 Ga0070672_100013891
340 Ga0070696_100089725
341 Ga0070693_100000703
342 Ga0070665_100005560
343 Ga0070665_100008204
344 Ga0070665_100028368
345 Ga0068855_100000163
346 Ga0068855_100123831
347 Ga0070664_100000544
348 Ga0070664_100048153
349 Ga0068857_100058275
350 Ga0068854_100048327
351 Ga0068854_100082784
352 Ga0068856_100001006
353 Ga0068856_100060282
354 Ga0068852_100000502
355 Ga0068852_100013907
356 Ga0068864_100005333
357 Ga0068864_100010009
358 Ga0068864_100038052
359 Ga0068851_10022353
360 Ga0068863_100000005
361 Ga0068863_100075193
362 Ga0068863_100183485
363 Ga0068858_100002024
364 Ga0068860_100000028
365 Ga0068860_100025643
366 Ga0068862_100017716
367 Ga0068862_100140879
368 Ga0075366_10003089
369 Ga0075366_10111849
370 Ga0097621_100057008
371 Ga0097621_100244400
372 Ga0075370_10004734
373 Ga0075370_10008960
374 Ga0105250_10004660
375 Ga0105240_10020736
376 Ga0105247_10084823
377 Ga0105241_10315450
378 Ga0105248_10005569
379 Ga0105248_10056551
380 Ga0105248_10128638
381 Ga0105248_10158001
382 Ga0105237_10058276
383 Ga0105238_10100625
384 Ga0105238_10189207
385 Ga0157373_10008452
386 Ga0163163_10000338
387 Ga0163163_10028144
388 Ga0157379_10012489
389 Ga0206354_11537384
390 Ga0213873_10000031
391 Ga0213876_10000020
392 Ga0213876_10000378
393 Ga0209233_1011612
394 Ga0207696_1005679
395 Ga0207713_1039785
396 Ga0207680_10074627
397 Ga0207647_10017285
398 Ga0207705_10000002
399 Ga0207705_10000260
400 Ga0207705_10018858
401 Ga0207705_10099363
402 Ga0207654_10216853
403 Ga0207671_10120394
404 Ga0207660_10005902
405 Ga0207660_10045934
406 Ga0207660_10151849
407 Ga0207660_10251494
408 Ga0207657_10000031
409 Ga0207657_10006383
410 Ga0207657_10027289
411 Ga0207657_10038265
412 Ga0207649_10000394
413 Ga0207649_10000396
414 Ga0207652_10000003
415 Ga0207652_10070344
416 Ga0207652_10077209
417 Ga0207652_10087872
418 Ga0207652_10244997
419 Ga0207652_10401024
420 Ga0207681_10000176
421 Ga0207644_10002537
422 Ga0207644_10005857
423 Ga0207644_10049194
424 Ga0207644_10059604
425 Ga0207690_10000382
426 Ga0207690_10051338
427 Ga0207690_10340257
428 Ga0207706_10000028
429 Ga0207706_10000475
430 Ga0207706_10082301
431 Ga0207691_10173141
432 Ga0207711_10000500
433 Ga0207711_10001375
434 Ga0207711_10020529
435 Ga0207711_10105867
436 Ga0207661_10193695
437 Ga0207661_10249233
438 Ga0207679_10000129
439 Ga0207667_10000357
440 Ga0207667_10369760
441 Ga0207668_10003524
442 Ga0207668_10222987
443 Ga0207640_10031599
444 Ga0207658_10002285
445 Ga0207658_10004048
446 Ga0207658_10036095
447 Ga0207703_10093564
448 Ga0207639_10000131
449 Ga0207678_10000740
450 Ga0207678_10025287
451 Ga0207702_10000247
452 Ga0207702_10062599
453 Ga0207702_10364235
454 Ga0207641_10000326
455 Ga0207641_10110431
456 Ga0207676_10008398
457 Ga0207676_10017890
458 Ga0207674_10000289
459 Ga0207674_10012168
460 Ga0209974_10011005
461 Ga0268266_10010263
462 Ga0268266_10010715
463 Ga0268266_10240517
464 Ga0268265_10127125
465 Ga0268264_10000066
466 Ga0268264_10078912
467 Ga0307408_100051681
468 Ga0307408_100314288
469 Ga0307405_10120689
470 Ga0307405_10350854
471 Ga0307413_10010033
472 Ga0307413_10205930
473 Ga0307410_10003819
474 Ga0307407_10004615
475 Ga0307409_100002843
476 Ga0307416_100043719
477 Ga0307414_10020826
478 Ga0307414_10114705
479 Ga0307414_10152371
480 Ga0307411_10011439
481 Ga0307411_10180093
482 Ga0307415_100018950
483 Ga0373954_0013710
484 Ga0373957_0036707
485 Ga0373955_0017242
486 Ga0316574_0029261
487 Ga0373931_0005757
488 Ga0373933_0089745
489 Ga0373937_0004086
490 Ga0316584_0040702
491 Ga0395899_0075855
492 Ga0395899_0191600
493 Ga0395900_0061137
494 Ga0395900_0094481
495 Ga0395900_0594868
496 Ga0395898_0010805
497 Ga0395898_0257543
498 Ga0395905_0070193
499 Ga0395905_0117823
500 Ga0395905_0187582
501 Ga0395905_0193281
502 Ga0395905_0259888
503 Ga0395901_0010013
504 Ga0395901_0194748
505 Ga0436365_0343272
506 Ga0436365_1302039
507 Ga0436362_0346086
508 Ga0439443_006081
509 Ga0451577_0464683
510 Ga0453684_0376343
511 Ga0466957_0120980
512 Ga0466958_0021618
513 Ga0466967_0037141
514 Ga0466967_0186175
515 Ga0495623_0031826
516 Ga0495669_0017334
517 Ga0495613_0001115
518 Ga0495602_0028280
519 Ga0496100_0029394
520 Ga0496100_0061192
521 Ga0496101_0119007
522 Ga0496101_0177949
523 Ga0496102_0000445
524 Ga0496102_0042681
525 Ga0496103_0000021
526 Ga0496104_0000131
527 Ga0496105_0000111
528 Ga0496106_0017372
529 Ga0496107_0001919
530 Ga0496107_0008085
531 Ga0496107_0049549
532 Ga0496107_0127414
533 Ga0496108_0007036
534 Ga0496109_0006003
535 Ga0496110_0012913
536 Ga0496111_0003769
537 Ga0496112_0005909
538 Ga0496112_0009196
539 Ga0496112_0030253
540 Ga0496113_0001810
541 Ga0496116_0119500
542 Ga0496117_0013284
543 Ga0496118_0082580
544 Ga0496119_0000339
545 Ga0496120_0000334
546 Ga0496122_0001206
547 Ga0496123_0000367
548 Ga0496124_0017839
549 Ga0496125_0011446
550 Ga0496126_0000367
551 Ga0501034_0165035
552 Ga0501074_0026641
553 Ga0501080_0056533
554 Ga0501044_0187941
555 nmdc:mga0k408_15552_c1
556 nmdc:mga0k408_58464_c1
557 nmdc:mga07m45_151208_c1
558 nmdc:mga07m45_19911_c1
559 nmdc:mga07m45_909_c1
560 Ga0495612_0046861
561 Ga0500559_0000010
562 Ga0500622_0000283
563 Ga0466962_0035555
564 2643948673
565 2738711605
566 2738850030
567 2738865759
568 2739298277
569 2739359955
570 2896255735
571 2928103760
572 2928961688

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01979

Amidohydro_1

Amidohydrolase family

12

307

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
2z25-assembly1.cif.gz_B thr110val dihydroorotase from e. coli 0.9606 6 345
3mjm-assembly1.cif.gz_B his257ala mutant of dihydroorotase from e. coli 0.9606 6 345
6cty-assembly2.cif.gz_F crystal structure of dihydroorotase pyrc from yersinia pestis in complex with zinc and malate at 2.4 a resolution 0.9604 6 345
1xge-assembly1.cif.gz_B dihydroorotase from escherichia coli: loop movement and cooperativity between subunits 0.9603 6 345
2z24-assembly1.cif.gz_B thr110ser dihydroorotase from e. coli 0.9592 6 345
ID Description Score Start End Superfamily
af_Q9UTI0_1_335_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9423 6 346 3.20.20.140
4lfyB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9377 2 346 3.20.20.140
af_Q9UTI0_1_335_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9368 6 346 3.20.20.140
3pnuA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9203 1 346 3.20.20.140
4lfyB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.917 2 346 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A1J3IPR5-F1-model_v4 Dihydroorotase, mitochondrial 0.9987 7 81 GO:0004151
GO:0006207
GO:0009507
GO:0044205
GO:0046872
AF-A0A2X3F9W8-F1-model_v4 Dihydroorotase (EC 3.5.2.3) 0.9969 76 201 GO:0004151
GO:0005829
GO:0006207
GO:0044205
AF-A0A519VNW5-F1-model_v4 Dihydroorotase (EC 3.5.2.3) 0.9967 7 73 GO:0004151
GO:0005737
GO:0006207
GO:0044205
GO:0046872
AF-A0A7C5GPA1-F1-model_v4 dihydroorotase (EC 3.5.2.3) 0.996 11 171 GO:0004151
GO:0005829
GO:0006207
GO:0044205
GO:0046872
AF-A0A358L4U7-F1-model_v4 dihydroorotase (EC 3.5.2.3) 0.9954 7 180 GO:0004151
GO:0005829
GO:0006207
GO:0044205

Map