F386889

General Info

Members Datasets Scaffolds Average Seq Length
285 180 570 307

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10003266|Ga0316576_100032665
Length 349
Sequence VGKRPASTRVRPARDDAPTEHEPDGATGHGAAADPAGDPDDXXXGRPSPGLSAFIGHLAYERRLSPHTVGNYERDLRRIAAWCSNHGVTDWPELREIHVRRYLADRHRGGVGGRTMARELSALRTLFEYLLREGEAKVNPARGVRAPKSSRKLPDTFDADTLMALMDGPAGGDQTGDDDPLTRRDNAVVELFYSSGLRLAELIAVDVRDIDGADATLTVTGKGAKTRRVPVGTKALAAIRAWLQVRGLLAGPDEPALFVSSRGSRIHPRTVQKRLQQWAQERGAARNLHPHLLRHSFASHLLESSGDLRAVQELLGHADISTTQVYTHLDFQHLAKVYDQAHPRAKRKR

Samples

Sample ID Description Type Environment
1 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
60 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
94 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
95 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
98 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
99 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
100 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
101 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
102 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
103 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
104 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
109 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
110 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
111 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
112 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
113 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
114 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
115 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
116 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
117 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
118 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
119 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
120 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
123 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
124 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
125 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
126 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
127 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
128 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
129 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
130 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
131 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
132 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
133 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
134 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
135 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
136 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
137 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
138 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
139 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
140 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
141 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
142 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
143 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
144 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
145 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
146 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
147 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
148 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
149 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
150 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
151 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
152 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
153 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
154 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
155 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
156 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
157 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
158 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
169 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
170 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
171 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
175 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
176 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
177 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
178 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
179 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
180 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.49
Metatranscriptomes 3.51
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.4
Nodule 0
Rhizoplane 3.51
Rhizosphere 85.96
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316576_10003266 3300031727 Bacteria 9463
2 Ga0070683_100026109 3300005329 Bacteria 5254
3 Ga0070690_100001306 3300005330 Bacteria 12946
4 Ga0070670_100112310 3300005331 Bacteria 2348
5 Ga0070677_10002267 3300005333 Bacteria 6132
6 Ga0068869_100068598 3300005334 Bacteria 2620
7 Ga0068869_100086930 3300005334 Bacteria 2345
8 Ga0070680_100029640 3300005336 Bacteria 4395
9 Ga0070682_100024421 3300005337 Bacteria 3597
10 Ga0070689_100000752 3300005340 Bacteria 19801
11 Ga0070691_10046206 3300005341 Bacteria 2068
12 Ga0070687_100061772 3300005343 Bacteria 1981
13 Ga0070669_100098830 3300005353 Bacteria 2199
14 Ga0070675_100022129 3300005354 Bacteria 5079
15 Ga0070675_100052453 3300005354 Bacteria 3353
16 Ga0070673_100180539 3300005364 Bacteria 1806
17 Ga0070688_100059771 3300005365 Bacteria 2405
18 Ga0070688_100164975 3300005365 Bacteria 1524
19 Ga0070709_10003499 3300005434 Bacteria 8431
20 Ga0070714_100017228 3300005435 Bacteria 5850
21 Ga0070713_100125660 3300005436 Bacteria 2255
22 Ga0070713_100159605 3300005436 Bacteria 2012
23 Ga0070701_10119916 3300005438 Bacteria 1481
24 Ga0070711_100106737 3300005439 Bacteria 2048
25 Ga0070700_100009753 3300005441 Bacteria 5280
26 Ga0070700_100021207 3300005441 Bacteria 3774
27 Ga0070678_100103795 3300005456 Bacteria 2209
28 Ga0070662_100182345 3300005457 Bacteria 1656
29 Ga0070681_10121548 3300005458 Bacteria 2546
30 Ga0070679_100017808 3300005530 Bacteria 6879
31 Ga0070684_100129685 3300005535 Bacteria 2274
32 Ga0070672_100023440 3300005543 Bacteria 4550
33 Ga0070672_100155251 3300005543 Bacteria 1895
34 Ga0070686_100065501 3300005544 Bacteria 2361
35 Ga0070665_100001516 3300005548 Bacteria 26927
36 Ga0070665_100003663 3300005548 Bacteria 16281
37 Ga0070665_100008451 3300005548 Bacteria 10412
38 Ga0070702_100401500 3300005615 Bacteria 981
39 Ga0068859_100013218 3300005617 Bacteria 8285
40 Ga0068859_100013256 3300005617 Bacteria 8272
41 Ga0068861_100001565 3300005719 Bacteria 14552
42 Ga0068861_100051473 3300005719 Bacteria 3126
43 Ga0068861_100107166 3300005719 Bacteria 2234
44 Ga0068863_100107627 3300005841 Bacteria 2653
45 Ga0068863_100147161 3300005841 Bacteria 2253
46 Ga0068863_100443029 3300005841 Bacteria 1274
47 Ga0068863_100467977 3300005841 Bacteria 1238
48 Ga0068858_100017857 3300005842 Bacteria 6643
49 Ga0068860_100001398 3300005843 Bacteria 26152
50 Ga0068860_100201994 3300005843 Bacteria 1926
51 Ga0068860_100232217 3300005843 Bacteria 1793
52 Ga0068860_100329330 3300005843 Bacteria 1500
53 Ga0081455_10001808 3300005937 Bacteria 25787
54 Ga0070717_10016265 3300006028 Bacteria 5765
55 Ga0070716_100024742 3300006173 Bacteria 3198
56 Ga0097621_100064200 3300006237 Bacteria 3019
57 Ga0097621_100101903 3300006237 Bacteria 2416
58 Ga0068871_100018637 3300006358 Bacteria 5282
59 Ga0068871_100051265 3300006358 Bacteria 3341
60 Ga0068871_100277292 3300006358 Bacteria 1466
61 Ga0068871_100303692 3300006358 Bacteria 1401
62 Ga0075431_100007781 3300006847 Bacteria 10671
63 Ga0097620_100013218 3300006931 Bacteria 8285
64 Ga0097620_100013256 3300006931 Bacteria 8272
65 Ga0105240_10034277 3300009093 Bacteria 6550
66 Ga0105240_10042650 3300009093 Bacteria 5780
67 Ga0105240_10194273 3300009093 Bacteria 2384
68 Ga0111539_10086823 3300009094 Bacteria 3676
69 Ga0111539_10286035 3300009094 Bacteria 1919
70 Ga0105241_10336438 3300009174 Bacteria 1306
71 Ga0105242_10575956 3300009176 Bacteria 1083
72 Ga0105248_10132806 3300009177 Bacteria 2809
73 Ga0105237_10108421 3300009545 Bacteria 2768
74 Ga0105237_10253079 3300009545 Bacteria 1763
75 Ga0105237_10349271 3300009545 Bacteria 1483
76 Ga0105238_10055583 3300009551 Bacteria 3973
77 Ga0105238_10402995 3300009551 Bacteria 1361
78 Ga0105238_10414145 3300009551 Bacteria 1342
79 Ga0105249_10035824 3300009553 Bacteria 4500
80 Ga0105239_10459945 3300010375 Bacteria 1444
81 Ga0163162_10208118 3300013306 Bacteria 2085
82 Ga0163162_10642389 3300013306 Bacteria 1185
83 Ga0157375_10654787 3300013308 Bacteria 1206
84 Ga0163163_10065023 3300014325 Bacteria 3619
85 Ga0163163_10157422 3300014325 Bacteria 2316
86 Ga0163163_10288666 3300014325 Bacteria 1693
87 Ga0157380_10087241 3300014326 Bacteria 2565
88 Ga0157380_10194732 3300014326 Bacteria 1793
89 Ga0157380_10283869 3300014326 Bacteria 1516
90 Ga0157379_10204617 3300014968 Bacteria 1785
91 Ga0157376_10098364 3300014969 Bacteria 2551
92 Ga0157376_10128539 3300014969 Bacteria 2257
93 Ga0157376_10195853 3300014969 Bacteria 1856
94 Ga0163161_10053128 3300017792 Bacteria 2938
95 Ga0163161_10411208 3300017792 Bacteria 1087
96 Ga0213871_10005203 3300021441 Bacteria 2666
97 Ga0207682_10004338 3300025893 Bacteria 5959
98 Ga0207682_10069506 3300025893 Bacteria 1489
99 Ga0207642_10083064 3300025899 Bacteria 1561
100 Ga0207645_10062680 3300025907 Bacteria 2375
101 Ga0207643_10001624 3300025908 Bacteria 12674
102 Ga0207643_10010713 3300025908 Bacteria 4941
103 Ga0207684_10194199 3300025910 Bacteria 1751
104 Ga0207695_10181664 3300025913 Bacteria 2024
105 Ga0207671_10060026 3300025914 Bacteria 2821
106 Ga0207671_10216141 3300025914 Bacteria 1501
107 Ga0207660_10044683 3300025917 Bacteria 3117
108 Ga0207652_10132085 3300025921 Bacteria 2227
109 Ga0207681_10027125 3300025923 Bacteria 3701
110 Ga0207659_10192634 3300025926 Bacteria 1623
111 Ga0207700_10024400 3300025928 Bacteria 4185
112 Ga0207700_10412259 3300025928 Bacteria 1185
113 Ga0207664_10047220 3300025929 Bacteria 3382
114 Ga0207709_10106091 3300025935 Bacteria 1868
115 Ga0207704_10458649 3300025938 Bacteria 1019
116 Ga0207691_10035587 3300025940 Bacteria 4620
117 Ga0207691_10037163 3300025940 Bacteria 4511
118 Ga0207691_10041421 3300025940 Bacteria 4253
119 Ga0207711_10105886 3300025941 Bacteria 2494
120 Ga0207689_10086078 3300025942 Bacteria 2583
121 Ga0207689_10105133 3300025942 Bacteria 2319
122 Ga0207689_10164264 3300025942 Bacteria 1829
123 Ga0207689_10473950 3300025942 Bacteria 1048
124 Ga0207651_10297349 3300025960 Bacteria 1341
125 Ga0207712_10158722 3300025961 Bacteria 1755
126 Ga0207640_10046178 3300025981 Bacteria 2801
127 Ga0207658_10274937 3300025986 Bacteria 1441
128 Ga0207703_10013167 3300026035 Bacteria 6444
129 Ga0207639_10281130 3300026041 Bacteria 1463
130 Ga0207678_10184561 3300026067 Bacteria 1781
131 Ga0207708_10023280 3300026075 Bacteria 4680
132 Ga0207708_10042729 3300026075 Bacteria 3454
133 Ga0207641_10001391 3300026088 Bacteria 23825
134 Ga0207641_10617664 3300026088 Bacteria 1062
135 Ga0207676_10009441 3300026095 Bacteria 6944
136 Ga0207675_100003324 3300026118 Bacteria 15743
137 Ga0207675_100052931 3300026118 Bacteria 3787
138 Ga0207675_100088162 3300026118 Bacteria 2914
139 Ga0207683_10038867 3300026121 Bacteria 4150
140 Ga0268266_10000589 3300028379 Bacteria 50116
141 Ga0268266_10016580 3300028379 Bacteria 6295
142 Ga0268266_10025884 3300028379 Bacteria 4991
143 Ga0268265_10380706 3300028380 Bacteria 1298
144 Ga0268265_10475147 3300028380 Bacteria 1173
145 Ga0268264_10000085 3300028381 Bacteria 240739
146 Ga0268264_10057342 3300028381 Bacteria 3258
147 Ga0268264_10215571 3300028381 Bacteria 1765
148 Ga0307515_10154865 3300028794 Bacteria 2372
149 Ga0307511_10027663 3300030521 Bacteria 5175
150 Ga0265331_10016460 3300031250 Bacteria 3881
151 Ga0307513_10003057 3300031456 Bacteria 22809
152 Ga0307513_10029593 3300031456 Bacteria 6239
153 Ga0307513_10462626 3300031456 Bacteria 991
154 Ga0307509_10055120 3300031507 Bacteria 4227
155 Ga0307509_10061275 3300031507 Bacteria 3973
156 Ga0316575_10001400 3300031665 Bacteria 7743
157 Ga0316575_10013892 3300031665 Bacteria 3016
158 Ga0316575_10034001 3300031665 Bacteria 2001
159 Ga0316579_10008493 3300031691 Bacteria 4284
160 Ga0316579_10069502 3300031691 Bacteria 1666
161 Ga0316579_10072640 3300031691 Bacteria 1631
162 Ga0316576_10052051 3300031727 Bacteria 2981
163 Ga0316576_10079679 3300031727 Bacteria 2428
164 Ga0316576_10185641 3300031727 Bacteria 1568
165 Ga0316576_10331403 3300031727 Bacteria 1134
166 Ga0316578_10001428 3300031728 Bacteria 9684
167 Ga0316578_10037010 3300031728 Bacteria 2810
168 Ga0307405_10062163 3300031731 Bacteria 2364
169 Ga0316577_10001909 3300031733 Bacteria 10077
170 Ga0307413_10010256 3300031824 Bacteria 4533
171 Ga0307413_10011947 3300031824 Bacteria 4297
172 Ga0307410_10029948 3300031852 Bacteria 3473
173 Ga0307412_10142951 3300031911 Bacteria 1755
174 Ga0307409_100013352 3300031995 Bacteria 5282
175 Ga0307409_100082802 3300031995 Bacteria 2599
176 Ga0307416_100016312 3300032002 Bacteria 5159
177 Ga0307414_10131146 3300032004 Bacteria 1946
178 Ga0307411_10002813 3300032005 Bacteria 7843
179 Ga0307415_100029209 3300032126 Bacteria 3521
180 Ga0307415_100450327 3300032126 Bacteria 1113
181 Ga0316583_10015448 3300032133 Bacteria 2747
182 Ga0316585_10000197 3300032137 Bacteria 12388
183 Ga0316585_10010249 3300032137 Bacteria 2748
184 Ga0316585_10018338 3300032137 Bacteria 2123
185 Ga0316580_10013017 3300032139 Bacteria 2535
186 Ga0316580_10016368 3300032139 Bacteria 2275
187 Ga0316580_10037095 3300032139 Bacteria 1508
188 Ga0316580_10047260 3300032139 Bacteria 1326
189 Ga0316593_10004115 3300032168 Bacteria 3693
190 Ga0316593_10015123 3300032168 Bacteria 2316
191 Ga0316592_1009384 3300033524 Bacteria 1958
192 Ga0316592_1018093 3300033524 Bacteria 1483
193 Ga0316588_1005532 3300033528 Bacteria 2466
194 Ga0316588_1011632 3300033528 Bacteria 1881
195 Ga0316588_1022056 3300033528 Bacteria 1453
196 Ga0316596_1006521 3300033541 Bacteria 2719
197 Ga0316596_1008801 3300033541 Bacteria 2414
198 Ga0316596_1018575 3300033541 Bacteria 1758
199 Ga0373946_0023070 3300035171 Bacteria 2429
200 Ga0373955_0015014 3300035172 Bacteria 3782
201 Ga0316574_0011841 3300035398 Bacteria 4971
202 Ga0316574_0029807 3300035398 Bacteria 3299
203 Ga0316574_0060223 3300035398 Bacteria 2382
204 Ga0373937_0152990 3300036401 Bacteria 2161
205 Ga0316582_0000613 3300036647 Bacteria 13870
206 Ga0316582_0065317 3300036647 Bacteria 2342
207 Ga0316582_0168830 3300036647 Bacteria 1484
208 Ga0316584_0003100 3300036712 Bacteria 10726
209 Ga0316584_0015126 3300036712 Bacteria 5515
210 Ga0316584_0267643 3300036712 Bacteria 1244
211 Ga0316581_0004811 3300037588 Bacteria 3474
212 Ga0316581_0040484 3300037588 Bacteria 1419
213 Ga0400484_09067 3300038725 Bacteria 19085
214 Ga0400490_13495 3300038726 Bacteria 30322
215 Ga0400490_23786 3300038726 Bacteria 23887
216 Ga0400490_60990 3300038726 Bacteria 10858
217 Ga0400485_06520 3300038735 Bacteria 3216
218 Ga0400485_11848 3300038735 Bacteria 2519
219 Ga0400488_59976 3300038741 Bacteria 11525
220 Ga0400486_14507 3300038742 Bacteria 3383
221 Ga0400486_19308 3300038742 Bacteria 1197
222 Ga0400483_135177 3300039062 Bacteria 1941
223 Ga0400483_222691 3300039062 Bacteria 32176
224 Ga0400489_45014 3300039093 Bacteria 1907
225 Ga0400489_59570 3300039093 Bacteria 26016
226 Ga0400487_42418 3300039110 Bacteria 22363
227 Ga0436365_1000380 3300039437 Bacteria 4463
228 Ga0436360_0391186 3300039438 Bacteria 2731
229 Ga0436363_0216572 3300039450 Bacteria 5088
230 Ga0451793_0136609 3300041452 Bacteria 1410
231 Ga0451793_1060877 3300041452 Bacteria 1626
232 Ga0451807_1448232 3300041486 Bacteria 5455
233 Ga0451853_2208681 3300041512 Bacteria 2754
234 Ga0451853_3651236 3300041512 Bacteria 1569
235 Ga0439434_0013595 3300042435 Bacteria 2417
236 Ga0450918_005636 3300042531 Bacteria 2246
237 Ga0466966_0000214 3300044684 Bacteria 38731
238 Ga0466971_0000271 3300044719 Bacteria 19954
239 Ga0466970_0001850 3300044765 Bacteria 10227
240 Ga0466957_0024050 3300044842 Bacteria 3605
241 Ga0466959_0111853 3300045049 Bacteria 1948
242 Ga0495638_0044087 3300046460 Bacteria 2811
243 Ga0495616_0006983 3300046513 Bacteria 6798
244 Ga0495616_0026475 3300046513 Bacteria 3086
245 Ga0495616_0061978 3300046513 Bacteria 1833
246 Ga0495632_0050443 3300046519 Bacteria 2052
247 Ga0495632_0150111 3300046519 Bacteria 1078
248 Ga0495625_0047959 3300046660 Bacteria 3078
249 Ga0495625_0070705 3300046660 Bacteria 2450
250 Ga0495658_0129478 3300046683 Bacteria 1535
251 Ga0495649_0008545 3300046694 Bacteria 6153
252 Ga0495687_014132 3300047443 Bacteria 4127
253 Ga0495686_0048039 3300047472 Bacteria 2693
254 Ga0496104_0128334 3300048907 Bacteria 2435
255 Ga0496104_0244165 3300048907 Bacteria 1708
256 Ga0496108_0331959 3300048911 Bacteria 1326
257 Ga0496114_0040197 3300048917 Bacteria 3870
258 Ga0496114_0053597 3300048917 Bacteria 3362
259 Ga0496115_0056604 3300048918 Bacteria 3152
260 Ga0496115_0147092 3300048918 Bacteria 1945
261 Ga0496125_0000797 3300048928 Bacteria 51430
262 Ga0501034_0269195 3300049571 Bacteria 1645
263 Ga0501036_0214759 3300049572 Bacteria 1616
264 Ga0501036_0582763 3300049572 Bacteria 929
265 Ga0501038_0043689 3300049574 Bacteria 3896
266 Ga0501040_0000138 3300049576 Bacteria 39114
267 Ga0501042_0000233 3300049578 Bacteria 26779
268 Ga0501068_0003138 3300049584 Bacteria 8845
269 Ga0501070_0056918 3300049586 Bacteria 3241
270 Ga0501071_0010515 3300049587 Bacteria 6206
271 Ga0501071_0099922 3300049587 Bacteria 2138
272 Ga0501072_0160312 3300049588 Bacteria 1794
273 Ga0501073_0033161 3300049589 Bacteria 3678
274 Ga0501077_0027289 3300049593 Bacteria 3626
275 Ga0501079_0003634 3300049741 Bacteria 11355
276 Ga0501083_0028691 3300049744 Bacteria 3834
277 nmdc:mga09592_46907_c1 3300050508 Bacteria 3640
278 nmdc:mga08y16_55548_c1 3300050511 Bacteria 4137
279 Ga0495601_0124569 3300053077 Bacteria 1676
280 Ga0500583_0143161 3300053092 Bacteria 1188
281 Ga0500556_0000901 3300053104 Bacteria 16547
282 Ga0500568_0031645 3300053139 Bacteria 2181
283 Ga0500639_057276 3300053163 Bacteria 2016
284 Ga0501084_0002861 3300054114 Bacteria 13952
285 Ga0466962_0000092 3300061719 Bacteria 36558
286 Ga0316576_10003266
287 Ga0070683_100026109
288 Ga0070690_100001306
289 Ga0070670_100112310
290 Ga0070677_10002267
291 Ga0068869_100068598
292 Ga0068869_100086930
293 Ga0070680_100029640
294 Ga0070682_100024421
295 Ga0070689_100000752
296 Ga0070691_10046206
297 Ga0070687_100061772
298 Ga0070669_100098830
299 Ga0070675_100022129
300 Ga0070675_100052453
301 Ga0070673_100180539
302 Ga0070688_100059771
303 Ga0070688_100164975
304 Ga0070709_10003499
305 Ga0070714_100017228
306 Ga0070713_100125660
307 Ga0070713_100159605
308 Ga0070701_10119916
309 Ga0070711_100106737
310 Ga0070700_100009753
311 Ga0070700_100021207
312 Ga0070678_100103795
313 Ga0070662_100182345
314 Ga0070681_10121548
315 Ga0070679_100017808
316 Ga0070684_100129685
317 Ga0070672_100023440
318 Ga0070672_100155251
319 Ga0070686_100065501
320 Ga0070665_100001516
321 Ga0070665_100003663
322 Ga0070665_100008451
323 Ga0070702_100401500
324 Ga0068859_100013218
325 Ga0068859_100013256
326 Ga0068861_100001565
327 Ga0068861_100051473
328 Ga0068861_100107166
329 Ga0068863_100107627
330 Ga0068863_100147161
331 Ga0068863_100443029
332 Ga0068863_100467977
333 Ga0068858_100017857
334 Ga0068860_100001398
335 Ga0068860_100201994
336 Ga0068860_100232217
337 Ga0068860_100329330
338 Ga0081455_10001808
339 Ga0070717_10016265
340 Ga0070716_100024742
341 Ga0097621_100064200
342 Ga0097621_100101903
343 Ga0068871_100018637
344 Ga0068871_100051265
345 Ga0068871_100277292
346 Ga0068871_100303692
347 Ga0075431_100007781
348 Ga0097620_100013218
349 Ga0097620_100013256
350 Ga0105240_10034277
351 Ga0105240_10042650
352 Ga0105240_10194273
353 Ga0111539_10086823
354 Ga0111539_10286035
355 Ga0105241_10336438
356 Ga0105242_10575956
357 Ga0105248_10132806
358 Ga0105237_10108421
359 Ga0105237_10253079
360 Ga0105237_10349271
361 Ga0105238_10055583
362 Ga0105238_10402995
363 Ga0105238_10414145
364 Ga0105249_10035824
365 Ga0105239_10459945
366 Ga0163162_10208118
367 Ga0163162_10642389
368 Ga0157375_10654787
369 Ga0163163_10065023
370 Ga0163163_10157422
371 Ga0163163_10288666
372 Ga0157380_10087241
373 Ga0157380_10194732
374 Ga0157380_10283869
375 Ga0157379_10204617
376 Ga0157376_10098364
377 Ga0157376_10128539
378 Ga0157376_10195853
379 Ga0163161_10053128
380 Ga0163161_10411208
381 Ga0213871_10005203
382 Ga0207682_10004338
383 Ga0207682_10069506
384 Ga0207642_10083064
385 Ga0207645_10062680
386 Ga0207643_10001624
387 Ga0207643_10010713
388 Ga0207684_10194199
389 Ga0207695_10181664
390 Ga0207671_10060026
391 Ga0207671_10216141
392 Ga0207660_10044683
393 Ga0207652_10132085
394 Ga0207681_10027125
395 Ga0207659_10192634
396 Ga0207700_10024400
397 Ga0207700_10412259
398 Ga0207664_10047220
399 Ga0207709_10106091
400 Ga0207704_10458649
401 Ga0207691_10035587
402 Ga0207691_10037163
403 Ga0207691_10041421
404 Ga0207711_10105886
405 Ga0207689_10086078
406 Ga0207689_10105133
407 Ga0207689_10164264
408 Ga0207689_10473950
409 Ga0207651_10297349
410 Ga0207712_10158722
411 Ga0207640_10046178
412 Ga0207658_10274937
413 Ga0207703_10013167
414 Ga0207639_10281130
415 Ga0207678_10184561
416 Ga0207708_10023280
417 Ga0207708_10042729
418 Ga0207641_10001391
419 Ga0207641_10617664
420 Ga0207676_10009441
421 Ga0207675_100003324
422 Ga0207675_100052931
423 Ga0207675_100088162
424 Ga0207683_10038867
425 Ga0268266_10000589
426 Ga0268266_10016580
427 Ga0268266_10025884
428 Ga0268265_10380706
429 Ga0268265_10475147
430 Ga0268264_10000085
431 Ga0268264_10057342
432 Ga0268264_10215571
433 Ga0307515_10154865
434 Ga0307511_10027663
435 Ga0265331_10016460
436 Ga0307513_10003057
437 Ga0307513_10029593
438 Ga0307513_10462626
439 Ga0307509_10055120
440 Ga0307509_10061275
441 Ga0316575_10001400
442 Ga0316575_10013892
443 Ga0316575_10034001
444 Ga0316579_10008493
445 Ga0316579_10069502
446 Ga0316579_10072640
447 Ga0316576_10052051
448 Ga0316576_10079679
449 Ga0316576_10185641
450 Ga0316576_10331403
451 Ga0316578_10001428
452 Ga0316578_10037010
453 Ga0307405_10062163
454 Ga0316577_10001909
455 Ga0307413_10010256
456 Ga0307413_10011947
457 Ga0307410_10029948
458 Ga0307412_10142951
459 Ga0307409_100013352
460 Ga0307409_100082802
461 Ga0307416_100016312
462 Ga0307414_10131146
463 Ga0307411_10002813
464 Ga0307415_100029209
465 Ga0307415_100450327
466 Ga0316583_10015448
467 Ga0316585_10000197
468 Ga0316585_10010249
469 Ga0316585_10018338
470 Ga0316580_10013017
471 Ga0316580_10016368
472 Ga0316580_10037095
473 Ga0316580_10047260
474 Ga0316593_10004115
475 Ga0316593_10015123
476 Ga0316592_1009384
477 Ga0316592_1018093
478 Ga0316588_1005532
479 Ga0316588_1011632
480 Ga0316588_1022056
481 Ga0316596_1006521
482 Ga0316596_1008801
483 Ga0316596_1018575
484 Ga0373946_0023070
485 Ga0373955_0015014
486 Ga0316574_0011841
487 Ga0316574_0029807
488 Ga0316574_0060223
489 Ga0373937_0152990
490 Ga0316582_0000613
491 Ga0316582_0065317
492 Ga0316582_0168830
493 Ga0316584_0003100
494 Ga0316584_0015126
495 Ga0316584_0267643
496 Ga0316581_0004811
497 Ga0316581_0040484
498 Ga0400484_09067
499 Ga0400490_13495
500 Ga0400490_23786
501 Ga0400490_60990
502 Ga0400485_06520
503 Ga0400485_11848
504 Ga0400488_59976
505 Ga0400486_14507
506 Ga0400486_19308
507 Ga0400483_135177
508 Ga0400483_222691
509 Ga0400489_45014
510 Ga0400489_59570
511 Ga0400487_42418
512 Ga0436365_1000380
513 Ga0436360_0391186
514 Ga0436363_0216572
515 Ga0451793_0136609
516 Ga0451793_1060877
517 Ga0451807_1448232
518 Ga0451853_2208681
519 Ga0451853_3651236
520 Ga0439434_0013595
521 Ga0450918_005636
522 Ga0466966_0000214
523 Ga0466971_0000271
524 Ga0466970_0001850
525 Ga0466957_0024050
526 Ga0466959_0111853
527 Ga0495638_0044087
528 Ga0495616_0006983
529 Ga0495616_0026475
530 Ga0495616_0061978
531 Ga0495632_0050443
532 Ga0495632_0150111
533 Ga0495625_0047959
534 Ga0495625_0070705
535 Ga0495658_0129478
536 Ga0495649_0008545
537 Ga0495687_014132
538 Ga0495686_0048039
539 Ga0496104_0128334
540 Ga0496104_0244165
541 Ga0496108_0331959
542 Ga0496114_0040197
543 Ga0496114_0053597
544 Ga0496115_0056604
545 Ga0496115_0147092
546 Ga0496125_0000797
547 Ga0501034_0269195
548 Ga0501036_0214759
549 Ga0501036_0582763
550 Ga0501038_0043689
551 Ga0501040_0000138
552 Ga0501042_0000233
553 Ga0501068_0003138
554 Ga0501070_0056918
555 Ga0501071_0010515
556 Ga0501071_0099922
557 Ga0501072_0160312
558 Ga0501073_0033161
559 Ga0501077_0027289
560 Ga0501079_0003634
561 Ga0501083_0028691
562 nmdc:mga09592_46907_c1
563 nmdc:mga08y16_55548_c1
564 Ga0495601_0124569
565 Ga0500583_0143161
566 Ga0500556_0000901
567 Ga0500568_0031645
568 Ga0500639_057276
569 Ga0501084_0002861
570 Ga0466962_0000092

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02899

Phage_int_SAM_1

Phage integrase, N-terminal SAM-like domain

51

134

0.97

PF00589

Phage_integrase

Phage integrase family

156

333

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nrw-assembly1.cif.gz_A crystal structure of the n-terminal domain of phage integrase/site-specific recombinase (tnp) from haloarcula marismortui, northeast structural genomics consortium target hmr208a 0.8295 5 101
6hah-assembly1.cif.gz_A crystal structure of paf - p-sulfonatocalix[6]arene complex 0.7974 171 195
2kd1-assembly1.cif.gz_A solution nmr structure of the integrase-like domain from bacillus cereus ordered locus bc_1272. northeast structural genomics consortium target bcr268f 0.7939 1 118
2mhv-assembly1.cif.gz_A solution structure of penicillium antifungal protein paf 0.7768 171 195
3nrw-assembly1.cif.gz_A crystal structure of the n-terminal domain of phage integrase/site-specific recombinase (tnp) from haloarcula marismortui, northeast structural genomics consortium target hmr208a 0.7552 5 101
ID Description Score Start End Superfamily
af_P0A8P6_5_99_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9836 7 110 1.10.150.130
af_Q2FY74_2_96_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9763 7 111 1.10.150.130
af_Q2FY74_2_96_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9563 7 111 1.10.150.130
af_Q2FZ30_3_95_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9535 8 111 1.10.150.130
af_P0A8P6_5_99_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9532 7 110 1.10.150.130
ID Description Score Start End GO Terms
AF-A0A6N6S2D1-F1-model_v4 Site-specific tyrosine recombinase XerD 0.9644 7 111 GO:0003677
GO:0015074
AF-X1KSG8-F1-model_v4 Tyr recombinase domain-containing protein 0.9541 122 259 GO:0003677
GO:0006310
GO:0015074
AF-X1IKC8-F1-model_v4 Tyr recombinase domain-containing protein 0.9357 122 245 GO:0003677
GO:0006310
GO:0015074
AF-A0A6N6S2D1-F1-model_v4 Site-specific tyrosine recombinase XerD 0.9169 7 111 GO:0003677
GO:0015074
AF-X1KSG8-F1-model_v4 Tyr recombinase domain-containing protein 0.9157 122 259 GO:0003677
GO:0006310
GO:0015074

Map