F386207

General Info

Members Datasets Scaffolds Average Seq Length
284 208 568 334

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10140360|Ga0157372_101403602
Length 392
Sequence MVIPSRVEVRIMTVLVTGGAGYVGSQLVHELHAAGESVVVMDDLSSGHADLVPGGVTLVIGSVGDPALLAQTLRQYGVTEIVHFAASAVVPESVRNPLLYYANNTTNTLTIAREAVLARVKSIIFSSTAAVYGNPQSVPVDESAPLQPLSPYGRSKLACEWIVRDVCSAHPLRYIVLRYFNVAGADPLLRTGQWSVGATHLIKVAIEAGLGIRQKLDVFGTDYSTSDGTGVRDFIHVADLAAAHVLALRRLREGCCNDTFNCGYGRGYSVLEVISAIKQEIGRDFQVNFGPRRTGDPAIVVADATKARAALGWRPQYDDLAVIVRHAIAWEIRMRTLRGRAAAHAPLTESIPAQSMGLAAADNATNIDRPPWPAHHNLEPSPPELGGDAAER

Samples

Sample ID Description Type Environment
1 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
39 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
40 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
41 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
42 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
43 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
44 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
45 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
63 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
64 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
65 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
66 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
67 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
77 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
78 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
79 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
80 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
81 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
82 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
88 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
89 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
90 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
91 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
92 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
93 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
94 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
95 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
96 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
100 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
101 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
102 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
103 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
104 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
105 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
106 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
107 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
111 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
112 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
113 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
114 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
115 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
116 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
130 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
133 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
147 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
148 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
152 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
157 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
158 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
159 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
160 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
162 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
163 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
166 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
167 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
168 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
169 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
170 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
171 2643221618 Ensifer sp. Root231 Isolate Unclassified
172 2643221626 Ensifer sp. Root31 Isolate Unclassified
173 2643221655 Ensifer sp. Root1252 Isolate Unclassified
174 2643221659 Ensifer sp. Root127 Isolate Unclassified
175 2643221698 Ensifer sp. Root142 Isolate Unclassified
176 2643221712 Ensifer sp. Root258 Isolate Unclassified
177 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
178 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
179 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
180 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
181 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
182 2844163670 Ensifer sp. 1H6 Isolate Unclassified
183 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
184 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
185 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
186 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
187 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
188 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
189 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
190 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
191 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
192 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
193 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
194 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
195 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
196 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
197 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
198 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
199 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
200 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
201 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
202 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
203 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
204 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
205 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
206 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule
207 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule
208 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.51
Metatranscriptomes 0
Isolates 15.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.39
Nodule 9.86
Rhizoplane 12.32
Rhizosphere 60.92
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157372_10140360 3300013307 Bacteria 2783
2 JGI25151J46595_10024792 3300003187 Bacteria 2449
3 JGI25153J46596_10007443 3300003215 Bacteria 5387
4 rootH2_10027789 3300003320 Bacteria 4026
5 rootH2_10192287 3300003320 Bacteria 3187
6 rootH1_10032232 3300003323 Bacteria 5698
7 Ga0055540_1000567 3300003792 Bacteria 27204
8 Ga0055531_10004633 3300003794 Bacteria 8259
9 Ga0070658_10000002 3300005327 Bacteria 637290
10 Ga0068868_100000090 3300005338 Bacteria 55967
11 Ga0070660_100010057 3300005339 Bacteria 6674
12 Ga0070675_100015865 3300005354 Bacteria 5965
13 Ga0070659_100000017 3300005366 Bacteria 163966
14 Ga0070700_100053774 3300005441 Bacteria 2514
15 Ga0070681_10040013 3300005458 Bacteria 4700
16 Ga0070695_100020806 3300005545 Bacteria 4008
17 Ga0070665_100000564 3300005548 Bacteria 51696
18 Ga0068861_100311207 3300005719 Bacteria 1368
19 Ga0081540_1001818 3300005983 Bacteria 17905
20 Ga0081540_1036044 3300005983 Bacteria 2644
21 Ga0070717_10262963 3300006028 Bacteria 1527
22 Ga0075365_10005261 3300006038 Bacteria 6963
23 Ga0075365_10011464 3300006038 Bacteria 5213
24 Ga0070712_100001365 3300006175 Bacteria 14802
25 Ga0075369_10007529 3300006186 Bacteria 4152
26 Ga0075428_100475003 3300006844 Bacteria 1338
27 Ga0075433_10022938 3300006852 Bacteria 5246
28 Ga0075434_100011447 3300006871 Bacteria 8371
29 Ga0075429_100184498 3300006880 Bacteria 1828
30 Ga0075429_100278581 3300006880 Bacteria 1464
31 Ga0075435_100051268 3300007076 Bacteria 3324
32 Ga0075435_100097766 3300007076 Bacteria 2429
33 Ga0111539_10063903 3300009094 Bacteria 4355
34 Ga0105245_10014262 3300009098 Bacteria 6924
35 Ga0105245_10041930 3300009098 Bacteria 4081
36 Ga0114129_10004119 3300009147 Bacteria 20545
37 Ga0114129_10177472 3300009147 Bacteria 2901
38 Ga0105248_10243382 3300009177 Bacteria 2025
39 Ga0105237_10361839 3300009545 Bacteria 1455
40 Ga0105238_10009120 3300009551 Bacteria 9929
41 Ga0105239_10006806 3300010375 Bacteria 13191
42 Ga0157370_10014362 3300013104 Bacteria 8099
43 Ga0157369_10016008 3300013105 Bacteria 8439
44 Ga0163162_10103191 3300013306 Bacteria 2945
45 Ga0182005_1015195 3300015265 Bacteria 2150
46 Ga0214544_1000053 3300021320 Bacteria 133908
47 Ga0214542_1000058 3300021321 Bacteria 133923
48 Ga0214545_1000026 3300021324 Bacteria 133811
49 Ga0214543_1000160 3300021327 Bacteria 96627
50 Ga0209025_1000037 3300025294 Bacteria 383429
51 Ga0209758_1002003 3300025297 Bacteria 21930
52 Ga0209051_1012077 3300025303 Bacteria 4204
53 Ga0209257_1003503 3300025304 Bacteria 13367
54 Ga0207684_10098537 3300025910 Bacteria 2497
55 Ga0207707_10001554 3300025912 Bacteria 21147
56 Ga0207693_10059942 3300025915 Bacteria 2981
57 Ga0207657_10018170 3300025919 Bacteria 6726
58 Ga0207694_10014084 3300025924 Bacteria 6028
59 Ga0207659_10180610 3300025926 Bacteria 1671
60 Ga0207690_10000035 3300025932 Bacteria 149201
61 Ga0207711_10202568 3300025941 Bacteria 1811
62 Ga0207677_10000224 3300026023 Bacteria 44846
63 Ga0207703_10450889 3300026035 Bacteria 1202
64 Ga0207639_10080626 3300026041 Bacteria 2575
65 Ga0207708_10043102 3300026075 Bacteria 3439
66 Ga0207708_10053306 3300026075 Bacteria 3082
67 Ga0207702_10003523 3300026078 Bacteria 14267
68 Ga0207702_10069952 3300026078 Bacteria 3018
69 Ga0207641_10005486 3300026088 Bacteria 10820
70 Ga0207675_100211105 3300026118 Bacteria 1867
71 Ga0209389_1000093 3300027296 Bacteria 82436
72 Ga0209489_107521 3300027361 Bacteria 16071
73 Ga0209700_100138 3300027363 Bacteria 111133
74 Ga0207428_10045966 3300027907 Bacteria 3513
75 Ga0265318_10011796 3300028577 Bacteria 3746
76 Ga0265328_10002032 3300031239 Bacteria 9152
77 Ga0265340_10025841 3300031247 Bacteria 2971
78 Ga0265340_10064641 3300031247 Bacteria 1744
79 Ga0265331_10000061 3300031250 Bacteria 168963
80 Ga0265327_10043404 3300031251 Bacteria 2406
81 Ga0265316_10048793 3300031344 Bacteria 3339
82 Ga0265314_10119982 3300031711 Bacteria 1657
83 Ga0307410_10023799 3300031852 Bacteria 3816
84 Ga0307410_10024316 3300031852 Bacteria 3783
85 Ga0307416_100233000 3300032002 Bacteria 1777
86 Ga0307414_10169928 3300032004 Bacteria 1742
87 Ga0307414_10187922 3300032004 Bacteria 1669
88 Ga0316583_10010657 3300032133 Bacteria 3314
89 Ga0373932_0066200 3300035112 Bacteria 1110
90 Ga0373936_0031702 3300035113 Bacteria 2088
91 Ga0373961_0027522 3300035241 Bacteria 1561
92 Ga0316574_0045820 3300035398 Bacteria 2709
93 Ga0373931_0012077 3300035691 Bacteria 4181
94 Ga0373933_0230439 3300035724 Bacteria 1190
95 Ga0395900_0045593 3300037418 Bacteria 4516
96 Ga0395900_0153529 3300037418 Bacteria 2352
97 Ga0395898_0006738 3300037466 Bacteria 12243
98 Ga0395898_0124473 3300037466 Bacteria 2470
99 Ga0395905_0006212 3300037471 Bacteria 12057
100 Ga0395905_0078142 3300037471 Bacteria 3101
101 Ga0395905_0094574 3300037471 Bacteria 2804
102 Ga0395901_0205047 3300038443 Bacteria 2066
103 Ga0395901_0319926 3300038443 Bacteria 1605
104 Ga0439436_0009064 3300041404 Bacteria 3052
105 Ga0439449_0000865 3300042007 Bacteria 11813
106 Ga0495643_0003948 3300046522 Bacteria 10621
107 Ga0495648_0046457 3300046524 Bacteria 2691
108 Ga0495654_0000180 3300046530 Bacteria 61780
109 Ga0495622_0022282 3300046557 Bacteria 2952
110 Ga0495668_0150564 3300046616 Bacteria 1274
111 Ga0495687_046034 3300047443 Bacteria 1886
112 Ga0496100_0155900 3300048903 Bacteria 1633
113 Ga0496101_0003810 3300048904 Bacteria 9423
114 Ga0496102_0119760 3300048905 Bacteria 2458
115 Ga0496102_0234844 3300048905 Bacteria 1729
116 Ga0496104_0001387 3300048907 Bacteria 20955
117 Ga0496104_0047998 3300048907 Bacteria 4025
118 Ga0496104_0174215 3300048907 Bacteria 2062
119 Ga0496104_0401119 3300048907 Bacteria 1284
120 Ga0496105_0027689 3300048908 Bacteria 4632
121 Ga0496105_0058170 3300048908 Bacteria 3191
122 Ga0496105_0163483 3300048908 Bacteria 1827
123 Ga0496106_0007939 3300048909 Bacteria 7841
124 Ga0496107_0003953 3300048910 Bacteria 9971
125 Ga0496108_0020489 3300048911 Bacteria 5437
126 Ga0496108_0059394 3300048911 Bacteria 3215
127 Ga0496108_0119736 3300048911 Bacteria 2257
128 Ga0496109_0001886 3300048912 Bacteria 17394
129 Ga0496109_0064051 3300048912 Bacteria 3363
130 Ga0496109_0075791 3300048912 Bacteria 3093
131 Ga0496110_0005976 3300048913 Bacteria 9583
132 Ga0496110_0012039 3300048913 Bacteria 7107
133 Ga0496110_0045910 3300048913 Bacteria 3820
134 Ga0496110_0046862 3300048913 Bacteria 3783
135 Ga0496110_0149212 3300048913 Bacteria 2116
136 Ga0496110_0189257 3300048913 Bacteria 1869
137 Ga0496111_0012581 3300048914 Bacteria 5734
138 Ga0496111_0025758 3300048914 Bacteria 4151
139 Ga0496111_0196888 3300048914 Bacteria 1498
140 Ga0496112_0010570 3300048915 Bacteria 8383
141 Ga0496112_0092201 3300048915 Bacteria 2999
142 Ga0496112_0137427 3300048915 Bacteria 2414
143 Ga0496113_0129334 3300048916 Bacteria 1980
144 Ga0496114_0108352 3300048917 Bacteria 2378
145 Ga0496115_0232707 3300048918 Bacteria 1519
146 Ga0496117_0001201 3300048920 Bacteria 38953
147 Ga0496119_0000936 3300048922 Bacteria 37609
148 Ga0496122_0032692 3300048925 Bacteria 4296
149 Ga0496123_0025125 3300048926 Bacteria 4500
150 Ga0496124_0035517 3300048927 Bacteria 4360
151 Ga0496126_0021030 3300048929 Bacteria 6385
152 Ga0496126_0161150 3300048929 Bacteria 1916
153 Ga0501031_0170796 3300049568 Bacteria 1421
154 Ga0501033_0000641 3300049570 Bacteria 32330
155 Ga0501033_0017715 3300049570 Bacteria 5380
156 Ga0501033_0074271 3300049570 Bacteria 2496
157 Ga0501034_0088074 3300049571 Bacteria 3103
158 Ga0501036_0017377 3300049572 Bacteria 6014
159 Ga0501037_0001036 3300049573 Bacteria 20557
160 Ga0501037_0028582 3300049573 Bacteria 4119
161 Ga0501037_0056600 3300049573 Bacteria 2863
162 Ga0501037_0082317 3300049573 Bacteria 2332
163 Ga0501038_0048492 3300049574 Bacteria 3675
164 Ga0501038_0049159 3300049574 Bacteria 3647
165 Ga0501038_0169708 3300049574 Bacteria 1767
166 Ga0501039_0093666 3300049575 Bacteria 2341
167 Ga0501039_0369911 3300049575 Bacteria 1126
168 Ga0501040_0032241 3300049576 Bacteria 3546
169 Ga0501041_0004894 3300049577 Bacteria 7784
170 Ga0501041_0187970 3300049577 Bacteria 1294
171 Ga0501043_0000022 3300049579 Bacteria 154467
172 Ga0501043_0069827 3300049579 Bacteria 2759
173 Ga0501046_0032352 3300049580 Bacteria 4235
174 Ga0501046_0178914 3300049580 Bacteria 1587
175 Ga0501047_0022292 3300049581 Bacteria 6084
176 Ga0501047_0298881 3300049581 Bacteria 1453
177 Ga0501047_0299884 3300049581 Bacteria 1450
178 Ga0501067_0062240 3300049583 Bacteria 2066
179 Ga0501067_0159379 3300049583 Bacteria 1257
180 Ga0501068_0006056 3300049584 Bacteria 6648
181 Ga0501068_0089550 3300049584 Bacteria 1897
182 Ga0501069_0000035 3300049585 Bacteria 88215
183 Ga0501069_0012799 3300049585 Bacteria 4466
184 Ga0501070_0000295 3300049586 Bacteria 46538
185 Ga0501070_0007723 3300049586 Bacteria 9119
186 Ga0501070_0302602 3300049586 Bacteria 1302
187 Ga0501071_0019898 3300049587 Bacteria 4662
188 Ga0501073_0042016 3300049589 Bacteria 3228
189 Ga0501073_0096586 3300049589 Bacteria 2052
190 Ga0501074_0000714 3300049590 Bacteria 20800
191 Ga0501074_0102659 3300049590 Bacteria 2047
192 Ga0501075_0056243 3300049591 Bacteria 2962
193 Ga0501075_0195252 3300049591 Bacteria 1544
194 Ga0501076_0020259 3300049592 Bacteria 5089
195 Ga0501077_0001505 3300049593 Bacteria 14054
196 Ga0501077_0034674 3300049593 Bacteria 3212
197 Ga0501079_0251133 3300049741 Bacteria 1382
198 Ga0501080_0000395 3300049742 Bacteria 33650
199 Ga0501080_0029082 3300049742 Bacteria 5144
200 Ga0501081_0002535 3300049743 Bacteria 11511
201 Ga0501083_0000104 3300049744 Bacteria 57084
202 Ga0501083_0004742 3300049744 Bacteria 9604
203 Ga0501083_0186384 3300049744 Bacteria 1354
204 Ga0501241_016182 3300049758 Bacteria 1360
205 Ga0501035_0000139 3300049822 Bacteria 88322
206 Ga0501044_0000433 3300049823 Bacteria 51535
207 Ga0501044_0014790 3300049823 Bacteria 8413
208 Ga0501044_0344656 3300049823 Bacteria 1410
209 Ga0501045_0001855 3300049824 Bacteria 14299
210 Ga0501045_0092726 3300049824 Bacteria 2234
211 nmdc:mga0yw44_5633_c1 3300050492 Bacteria 5955
212 nmdc:mga06z11_21774_c1 3300050494 Bacteria 2983
213 nmdc:mga04h51_20190_c1 3300050495 Bacteria 1985
214 nmdc:mga05p37_23484_c1 3300050507 Bacteria 7482
215 nmdc:mga05p37_260603_c1 3300050507 Bacteria 2075
216 nmdc:mga05p37_521733_c1 3300050507 Bacteria 1359
217 nmdc:mga09592_149002_c1 3300050508 Bacteria 2018
218 nmdc:mga09592_44490_c1 3300050508 Bacteria 3738
219 nmdc:mga0qj67_44978_c1 3300050509 Bacteria 3483
220 nmdc:mga06r32_4155_c1 3300050510 Bacteria 12967
221 nmdc:mga08y16_107532_c1 3300050511 Bacteria 2904
222 nmdc:mga08y16_11265_c1 3300050511 Bacteria 9393
223 nmdc:mga08y16_257327_c1 3300050511 Bacteria 1803
224 nmdc:mga0n895_4928_c1 3300050512 Bacteria 11075
225 nmdc:mga0rr50_30482_c1 3300050513 Bacteria 3819
226 nmdc:mga0rr50_377154_c1 3300050513 Bacteria 1195
227 nmdc:mga0a205_59354_c1 3300050515 Bacteria 3695
228 nmdc:mga0sz30_5903_c1 3300050516 Bacteria 4518
229 Ga0500578_0003225 3300053086 Bacteria 12433
230 Ga0500618_000090 3300053125 Bacteria 74320
231 Ga0500618_000340 3300053125 Bacteria 33633
232 Ga0500658_0002766 3300053134 Bacteria 6742
233 Ga0500616_0000442 3300053153 Bacteria 54652
234 Ga0500627_0097534 3300053158 Bacteria 1318
235 Ga0501084_0119394 3300054114 Bacteria 2216
236 Ga0501084_0217416 3300054114 Bacteria 1612
237 Ga0501082_0012098 3300060353 Bacteria 7415
238 Ga0501082_0101111 3300060353 Bacteria 2494
239 Ga0501082_0111053 3300060353 Bacteria 2373
240 Ga0530510_0009157 3300061734 Bacteria 6938
241 2509078860 2508501114 Bacteria 7082538
242 2511171440 2510917026 Bacteria 7046020
243 2513692057 2513237101 Bacteria 7952346
244 2513698588 2513237101 Bacteria 7952346
245 2586003677 2585427634 Bacteria 6455027
246 2599719653 2599185236 Bacteria 6875203
247 2644103440 2643221618 Bacteria 7717186
248 2644144319 2643221626 Bacteria 8069654
249 2644306370 2643221655 Bacteria 7722067
250 2644330560 2643221659 Bacteria 7890716
251 2644542636 2643221698 Bacteria 7756764
252 2644611981 2643221712 Bacteria 7729434
253 2728748146 2728368998 Bacteria 8720350
254 2792623022 2791355091 Bacteria 6135441
255 2792626834 2791355092 Bacteria 6248105
256 2821123523 2821123053 Bacteria 7836056
257 2835317797 2835312727 Bacteria 7413381
258 2844165110 2844163670 Bacteria 7266046
259 2847938895 2847930680 Bacteria 9342022
260 2854898139 2854896431 Bacteria 5869725
261 2854919815 2854916844 Bacteria 5725939
262 2857531086 2857531043 Bacteria 6754041
263 2874609839 2874604998 Bacteria 7834745
264 2881667576 2881665667 Bacteria 8175609
265 2891375087 2891373044 Bacteria 5202277
266 2894234979 2894232714 Bacteria 8834183
267 2906626533 2906626472 Bacteria 8826946
268 2919176657 2919171160 Bacteria 6499771
269 2920763539 2920760137 Bacteria 7427611
270 2935826724 2935819856 Bacteria 8261050
271 2935915862 2935908558 Bacteria 8568796
272 2935923031 2935916978 Bacteria 9113783
273 2935933479 2935926038 Bacteria 8601059
274 2935942006 2935934488 Bacteria 8602579
275 2935950456 2935942939 Bacteria 8599779
276 2935958630 2935951376 Bacteria 8602333
277 2935974975 2935967501 Bacteria 8603075
278 2939670642 2939669807 Bacteria 5028511
279 2941500865 2941499720 Bacteria 7599444
280 2989351608 2989349275 Bacteria 6349068
281 8006997411 8006994254 Bacteria 8309700
282 8016591436 8016583857 Bacteria 10421953
283 8019692347 8019687851 Bacteria 8712826
284 8056878905 8056875544 Bacteria 4355797
285 Ga0157372_10140360
286 JGI25151J46595_10024792
287 JGI25153J46596_10007443
288 rootH2_10027789
289 rootH2_10192287
290 rootH1_10032232
291 Ga0055540_1000567
292 Ga0055531_10004633
293 Ga0070658_10000002
294 Ga0068868_100000090
295 Ga0070660_100010057
296 Ga0070675_100015865
297 Ga0070659_100000017
298 Ga0070700_100053774
299 Ga0070681_10040013
300 Ga0070695_100020806
301 Ga0070665_100000564
302 Ga0068861_100311207
303 Ga0081540_1001818
304 Ga0081540_1036044
305 Ga0070717_10262963
306 Ga0075365_10005261
307 Ga0075365_10011464
308 Ga0070712_100001365
309 Ga0075369_10007529
310 Ga0075428_100475003
311 Ga0075433_10022938
312 Ga0075434_100011447
313 Ga0075429_100184498
314 Ga0075429_100278581
315 Ga0075435_100051268
316 Ga0075435_100097766
317 Ga0111539_10063903
318 Ga0105245_10014262
319 Ga0105245_10041930
320 Ga0114129_10004119
321 Ga0114129_10177472
322 Ga0105248_10243382
323 Ga0105237_10361839
324 Ga0105238_10009120
325 Ga0105239_10006806
326 Ga0157370_10014362
327 Ga0157369_10016008
328 Ga0163162_10103191
329 Ga0182005_1015195
330 Ga0214544_1000053
331 Ga0214542_1000058
332 Ga0214545_1000026
333 Ga0214543_1000160
334 Ga0209025_1000037
335 Ga0209758_1002003
336 Ga0209051_1012077
337 Ga0209257_1003503
338 Ga0207684_10098537
339 Ga0207707_10001554
340 Ga0207693_10059942
341 Ga0207657_10018170
342 Ga0207694_10014084
343 Ga0207659_10180610
344 Ga0207690_10000035
345 Ga0207711_10202568
346 Ga0207677_10000224
347 Ga0207703_10450889
348 Ga0207639_10080626
349 Ga0207708_10043102
350 Ga0207708_10053306
351 Ga0207702_10003523
352 Ga0207702_10069952
353 Ga0207641_10005486
354 Ga0207675_100211105
355 Ga0209389_1000093
356 Ga0209489_107521
357 Ga0209700_100138
358 Ga0207428_10045966
359 Ga0265318_10011796
360 Ga0265328_10002032
361 Ga0265340_10025841
362 Ga0265340_10064641
363 Ga0265331_10000061
364 Ga0265327_10043404
365 Ga0265316_10048793
366 Ga0265314_10119982
367 Ga0307410_10023799
368 Ga0307410_10024316
369 Ga0307416_100233000
370 Ga0307414_10169928
371 Ga0307414_10187922
372 Ga0316583_10010657
373 Ga0373932_0066200
374 Ga0373936_0031702
375 Ga0373961_0027522
376 Ga0316574_0045820
377 Ga0373931_0012077
378 Ga0373933_0230439
379 Ga0395900_0045593
380 Ga0395900_0153529
381 Ga0395898_0006738
382 Ga0395898_0124473
383 Ga0395905_0006212
384 Ga0395905_0078142
385 Ga0395905_0094574
386 Ga0395901_0205047
387 Ga0395901_0319926
388 Ga0439436_0009064
389 Ga0439449_0000865
390 Ga0495643_0003948
391 Ga0495648_0046457
392 Ga0495654_0000180
393 Ga0495622_0022282
394 Ga0495668_0150564
395 Ga0495687_046034
396 Ga0496100_0155900
397 Ga0496101_0003810
398 Ga0496102_0119760
399 Ga0496102_0234844
400 Ga0496104_0001387
401 Ga0496104_0047998
402 Ga0496104_0174215
403 Ga0496104_0401119
404 Ga0496105_0027689
405 Ga0496105_0058170
406 Ga0496105_0163483
407 Ga0496106_0007939
408 Ga0496107_0003953
409 Ga0496108_0020489
410 Ga0496108_0059394
411 Ga0496108_0119736
412 Ga0496109_0001886
413 Ga0496109_0064051
414 Ga0496109_0075791
415 Ga0496110_0005976
416 Ga0496110_0012039
417 Ga0496110_0045910
418 Ga0496110_0046862
419 Ga0496110_0149212
420 Ga0496110_0189257
421 Ga0496111_0012581
422 Ga0496111_0025758
423 Ga0496111_0196888
424 Ga0496112_0010570
425 Ga0496112_0092201
426 Ga0496112_0137427
427 Ga0496113_0129334
428 Ga0496114_0108352
429 Ga0496115_0232707
430 Ga0496117_0001201
431 Ga0496119_0000936
432 Ga0496122_0032692
433 Ga0496123_0025125
434 Ga0496124_0035517
435 Ga0496126_0021030
436 Ga0496126_0161150
437 Ga0501031_0170796
438 Ga0501033_0000641
439 Ga0501033_0017715
440 Ga0501033_0074271
441 Ga0501034_0088074
442 Ga0501036_0017377
443 Ga0501037_0001036
444 Ga0501037_0028582
445 Ga0501037_0056600
446 Ga0501037_0082317
447 Ga0501038_0048492
448 Ga0501038_0049159
449 Ga0501038_0169708
450 Ga0501039_0093666
451 Ga0501039_0369911
452 Ga0501040_0032241
453 Ga0501041_0004894
454 Ga0501041_0187970
455 Ga0501043_0000022
456 Ga0501043_0069827
457 Ga0501046_0032352
458 Ga0501046_0178914
459 Ga0501047_0022292
460 Ga0501047_0298881
461 Ga0501047_0299884
462 Ga0501067_0062240
463 Ga0501067_0159379
464 Ga0501068_0006056
465 Ga0501068_0089550
466 Ga0501069_0000035
467 Ga0501069_0012799
468 Ga0501070_0000295
469 Ga0501070_0007723
470 Ga0501070_0302602
471 Ga0501071_0019898
472 Ga0501073_0042016
473 Ga0501073_0096586
474 Ga0501074_0000714
475 Ga0501074_0102659
476 Ga0501075_0056243
477 Ga0501075_0195252
478 Ga0501076_0020259
479 Ga0501077_0001505
480 Ga0501077_0034674
481 Ga0501079_0251133
482 Ga0501080_0000395
483 Ga0501080_0029082
484 Ga0501081_0002535
485 Ga0501083_0000104
486 Ga0501083_0004742
487 Ga0501083_0186384
488 Ga0501241_016182
489 Ga0501035_0000139
490 Ga0501044_0000433
491 Ga0501044_0014790
492 Ga0501044_0344656
493 Ga0501045_0001855
494 Ga0501045_0092726
495 nmdc:mga0yw44_5633_c1
496 nmdc:mga06z11_21774_c1
497 nmdc:mga04h51_20190_c1
498 nmdc:mga05p37_23484_c1
499 nmdc:mga05p37_260603_c1
500 nmdc:mga05p37_521733_c1
501 nmdc:mga09592_149002_c1
502 nmdc:mga09592_44490_c1
503 nmdc:mga0qj67_44978_c1
504 nmdc:mga06r32_4155_c1
505 nmdc:mga08y16_107532_c1
506 nmdc:mga08y16_11265_c1
507 nmdc:mga08y16_257327_c1
508 nmdc:mga0n895_4928_c1
509 nmdc:mga0rr50_30482_c1
510 nmdc:mga0rr50_377154_c1
511 nmdc:mga0a205_59354_c1
512 nmdc:mga0sz30_5903_c1
513 Ga0500578_0003225
514 Ga0500618_000090
515 Ga0500618_000340
516 Ga0500658_0002766
517 Ga0500616_0000442
518 Ga0500627_0097534
519 Ga0501084_0119394
520 Ga0501084_0217416
521 Ga0501082_0012098
522 Ga0501082_0101111
523 Ga0501082_0111053
524 Ga0530510_0009157
525 2509078860
526 2511171440
527 2513692057
528 2513698588
529 2586003677
530 2599719653
531 2644103440
532 2644144319
533 2644306370
534 2644330560
535 2644542636
536 2644611981
537 2728748146
538 2792623022
539 2792626834
540 2821123523
541 2835317797
542 2844165110
543 2847938895
544 2854898139
545 2854919815
546 2857531086
547 2874609839
548 2881667576
549 2891375087
550 2894234979
551 2906626533
552 2919176657
553 2920763539
554 2935826724
555 2935915862
556 2935923031
557 2935933479
558 2935942006
559 2935950456
560 2935958630
561 2935974975
562 2939670642
563 2941500865
564 2989351608
565 8006997411
566 8016591436
567 8019692347
568 8056878905

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

14

263

0.93

PF04321

RmlD_sub_bind

RmlD substrate binding domain

12

186

0.9

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

15

170

0.82

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

14

187

0.81

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

15

325

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1hzj-assembly1.cif.gz_B human udp-galactose 4-epimerase: accommodation of udp-n-acetylglucosamine within the active site 0.967 2 323
2c20-assembly3.cif.gz_F crystal structure of udp-glucose 4-epimerase 0.9641 1 325
3enk-assembly1.cif.gz_B 1.9a crystal structure of udp-glucose 4-epimerase from burkholderia pseudomallei 0.9619 2 326
1i3n-assembly1.cif.gz_B molecular basis for severe epimerase-deficiency galactosemia: x-ray structure of the human v94m-substituted udp-galactose 4-epimerase 0.9599 2 323
4wok-assembly1.cif.gz_A crystal structure of udp-glucose 4-epimerase from brucella ovis in complex with nad 0.9593 2 325
ID Description Score Start End Superfamily
2c20A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9731 1 253 3.40.50.720
2c20A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9684 1 253 3.40.50.720
4wokA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9608 2 253 3.40.50.720
af_Q4DUZ8_1_205_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9547 1 171 3.40.50.720
af_Q4DN47_4_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9543 5 319 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7C1SXV4-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.9902 196 327 GO:0016853
GO:0033499
AF-A0A6G3XIY6-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.9882 1 112 GO:0016853
GO:0033499
AF-A0A8B3RRD1-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.9882 1 103 GO:0016853
GO:0033499
AF-A0A350CYY4-F1-model_v4 UDP-glucose 4-epimerase 0.9878 191 327 GO:0016853
GO:0033499
AF-A0A6B3GTU6-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9863 1 76

Map