F385600

General Info

Members Datasets Scaffolds Average Seq Length
283 226 236 293

Family's Representative Sequence

Representative Sequence 3300025298|Ga0209050_1013998|Ga0209050_10139983
Length 331
Sequence MRAGSTVTHIARAGRLGSGPALGPHTNAEWTTDMKILLLGKGGQVGWELQRSLAVAGEVVALDFDDGGDFSKPDSLLARVQAEAPQVIVNAAAYTAVDKAESEPELARQINARTPALLAIEARRTGAMLVHYSTDYVFDGSGNQARDEDAATGPLNVYGATKAEAEDAIRASGCQHLILRTSWVYAARGGNFAKTMLRLAAEREQLKVIADQVGAPTGAELLADLTVPMLRAVRVNPALVGTYNAVAGGETSWHEYARFVIEFARARGANMRVAPDQVLAIPTTDYPTPAKRPLNSRLACAKLQQRFGLRLPPWQQGVERMLNEILVEARA

Samples

Sample ID Description Type Environment
1 2512047018 Pseudomonas chlororaphis chlororaphis GP72 Isolate Rhizosphere
2 2582580891 Pseudomonas chlororaphis YL-1 Isolate Unclassified
3 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
4 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
5 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
6 2597489887 Pseudomonas chlororaphis aureofaciens 30-84 Isolate Rhizosphere
7 2599185185 Pseudomonas sp. NFPP07 Isolate Rhizoplane
8 2599185257 Pseudomonas sp. NFACC41-3 Isolate Rhizoplane
9 2599185288 Pseudomonas sp. NFACC25 Isolate Rhizoplane
10 2599185303 Pseudomonas sp. NFACC42-2 Isolate Rhizoplane
11 2600254931 Pseudomonas sp. NFIX28 Isolate Rhizoplane
12 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
13 2643221585 Pelomonas sp. Root662 Isolate Unclassified
14 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
15 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
16 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
17 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
18 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
19 2643221656 Pelomonas sp. Root405 Isolate Unclassified
20 2671180172 Pseudomonas sp. NFIX51 Isolate Rhizoplane
21 2675903420 Pseudomonas fluorescens Ps006 Isolate Unclassified
22 2728369097 Stutzerimonas balearica st101 Isolate Unclassified
23 2738541294 Pseudomonas sp. GV087 Isolate Unclassified
24 2738541309 Pseudomonas sp. GV047 Isolate Unclassified
25 2738541337 Pelomonas sp. BT06 Isolate Unclassified
26 2740892503 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
27 2808606361 Pseudomonas sp. SJZ075 Isolate Rhizosphere
28 2808606376 Pseudomonas sp. SJZ074 Isolate Rhizosphere
29 2808606378 Pseudomonas sp. SJZ078 Isolate Rhizosphere
30 2808606380 Pseudomonas sp. SJZ085 Isolate Rhizosphere
31 2808606383 Pseudomonas sp. SJZ124 Isolate Rhizosphere
32 2808606385 Pseudomonas sp. SJZ103 Isolate Rhizosphere
33 2808606388 Pseudomonas sp. SJZ094 Isolate Rhizosphere
34 2808606389 Pseudomonas sp. SJZ101 Isolate Rhizosphere
35 2842747753 Variovorax sp. R-72060 Isolate Unclassified
36 2842854478 Pseudomonas sp. R-71998 Isolate Unclassified
37 2852612431 Pseudomonas sp. SJZ073 Isolate Rhizosphere
38 2852667396 Pseudomonas sp. JAI120 Isolate Rhizosphere
39 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
40 2923153595 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
41 2984286254 Pseudomonas chlororaphis aurantiaca JD37 Isolate Rhizosphere
42 2988728565 Pseudomonas corrugata RM1-1-4 Isolate Rhizosphere
43 3007866637 Pseudomonas marvdashtae SWRI102 Isolate Rhizosphere
44 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
45 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
46 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
47 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
48 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
49 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
50 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
51 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
52 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
53 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
54 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
55 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
56 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
57 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
58 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
59 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
60 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
66 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
67 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
68 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
83 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
84 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
85 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
86 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
87 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
88 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
89 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
90 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
91 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
92 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
95 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
96 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
97 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
98 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
105 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
106 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
107 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
108 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
115 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
116 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
117 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
118 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
119 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
120 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
121 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
122 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
123 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
124 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
125 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
126 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
127 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
128 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
129 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
130 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
131 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
132 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
133 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
134 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
135 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
136 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
137 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
138 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
139 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
140 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
141 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
142 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
143 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
144 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
145 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
146 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
147 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
148 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
149 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
150 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
151 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
152 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
153 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
154 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
155 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
156 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
157 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
158 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
159 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
160 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
161 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
162 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
163 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
164 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
165 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
166 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
167 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
168 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
169 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
170 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
171 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
172 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
173 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
174 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
175 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
176 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
177 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
178 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
179 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
180 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
181 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
182 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
183 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
184 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
185 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
186 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
187 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
188 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
189 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
190 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
191 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
192 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
193 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
194 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
195 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
196 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
197 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
198 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
199 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
200 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
201 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
202 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
203 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
204 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
205 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
206 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
207 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
208 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
209 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
210 3300049771 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_B_4_control Metagenome Rhizosphere
211 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
212 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
213 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
214 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
215 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
216 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
217 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
218 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
219 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
220 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
221 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
222 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
223 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
224 8015687852 Pseudomonas chlororaphis aurantiaca RP4 Isolate Rhizosphere
225 8055817908 Pseudomonas pergaminensis 1008 Isolate Rhizosphere
226 8056143049 Pseudomonas alvandae SWRI17 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.04
Metatranscriptomes 0
Isolates 16.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.07
Nodule 0
Rhizoplane 3.53
Rhizosphere 68.9
Stem 0
Stem Tuber 0
Unclassified 14.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10035624 3300003316 Bacteria 1050
2 rootH1_10035624 3300003323 Bacteria 7201
3 rootH2_10023198 3300003320 Bacteria 9155
4 rootH1_10053800 3300003323 Bacteria 1113
5 rootH1_10084501 3300003323 Bacteria 1482
6 Ga0055536_1000109 3300003781 Bacteria 72531
7 Ga0055530_10000034 3300003791 Bacteria 118012
8 Ga0055540_1000658 3300003792 Bacteria 24199
9 Ga0055531_10000007 3300003794 Bacteria 225289
10 Ga0065165_1005965 3300005262 Bacteria 6588
11 Ga0065714_10044851 3300005288 Bacteria 1088
12 Ga0065704_10099018 3300005289 Bacteria 2328
13 Ga0068857_100401299 3300005577 Bacteria 1276
14 Ga0068856_100023741 3300005614 Bacteria 5964
15 Ga0075368_10020831 3300006042 Bacteria 2485
16 Ga0075367_10060515 3300006178 Bacteria 2258
17 Ga0075366_10005684 3300006195 Bacteria 6764
18 Ga0075366_10145557 3300006195 Bacteria 1433
19 Ga0105251_10002706 3300009011 Bacteria 13604
20 Ga0105250_10000325 3300009092 Bacteria 36727
21 Ga0157373_10004231 3300013100 Bacteria 10835
22 Ga0157373_10028145 3300013100 Bacteria 4055
23 Ga0157369_10012488 3300013105 Bacteria 9637
24 Ga0182008_10000156 3300014497 Bacteria 53866
25 Ga0163161_10043240 3300017792 Bacteria 3243
26 Ga0163161_10090551 3300017792 Bacteria 2263
27 Ga0213872_10000093 3300021361 Bacteria 83513
28 Ga0213872_10000105 3300021361 Bacteria 77592
29 Ga0207425_1002094 3300025245 Bacteria 7386
30 Ga0209129_1000027 3300025258 Bacteria 409587
31 Ga0209565_1008097 3300025263 Bacteria 2777
32 Ga0209673_1007558 3300025273 Bacteria 4979
33 Ga0209676_1000032 3300025292 Bacteria 469558
34 Ga0209564_1000014 3300025295 Bacteria 621501
35 Ga0209758_1000193 3300025297 Bacteria 134744
36 Ga0209758_1000208 3300025297 Bacteria 128596
37 Ga0209050_1000025 3300025298 Bacteria 528225
38 Ga0209050_1000198 3300025298 Bacteria 134820
39 Ga0209050_1013998 3300025298 Bacteria 3503
40 Ga0209051_1000039 3300025303 Bacteria 319632
41 Ga0209051_1000047 3300025303 Bacteria 293227
42 Ga0209051_1036984 3300025303 Bacteria 1796
43 Ga0209257_1000021 3300025304 Bacteria 771986
44 Ga0209257_1010098 3300025304 Bacteria 4874
45 Ga0209257_1028099 3300025304 Bacteria 1858
46 Ga0207696_1000386 3300025711 Bacteria 42561
47 Ga0207713_1003387 3300025735 Bacteria 10909
48 Ga0207709_10062137 3300025935 Bacteria 2336
49 Ga0207712_10274446 3300025961 Bacteria 1373
50 Ga0207702_10287707 3300026078 Bacteria 1556
51 Ga0209971_1005316 3300027682 Bacteria 3062
52 Ga0265319_1000301 3300028563 Bacteria 36705
53 Ga0265318_10000122 3300028577 Bacteria 71971
54 Ga0307517_10106102 3300028786 Bacteria 2175
55 Ga0307515_10009616 3300028794 Bacteria 18663
56 Ga0307515_10118352 3300028794 Bacteria 3024
57 Ga0307515_10139961 3300028794 Bacteria 2602
58 Ga0307515_10314456 3300028794 Bacteria 1238
59 Ga0265330_10000012 3300031235 Bacteria 180837
60 Ga0265330_10005977 3300031235 Bacteria 6025
61 Ga0265332_10000012 3300031238 Bacteria 272641
62 Ga0265332_10020683 3300031238 Bacteria 2906
63 Ga0265325_10008795 3300031241 Bacteria 5934
64 Ga0265329_10000720 3300031242 Bacteria 16786
65 Ga0265329_10037731 3300031242 Bacteria 1556
66 Ga0265340_10001710 3300031247 Bacteria 12588
67 Ga0265340_10033752 3300031247 Bacteria 2546
68 Ga0265339_10008636 3300031249 Bacteria 6464
69 Ga0265339_10019141 3300031249 Bacteria 4023
70 Ga0265331_10000028 3300031250 Bacteria 216539
71 Ga0265331_10060093 3300031250 Bacteria 1796
72 Ga0265316_10027007 3300031344 Bacteria 4764
73 Ga0307513_10008378 3300031456 Bacteria 13239
74 Ga0307408_100000023 3300031548 Bacteria 295931
75 Ga0307408_100001094 3300031548 Bacteria 20723
76 Ga0307408_100012140 3300031548 Bacteria 5702
77 Ga0265313_10000847 3300031595 Bacteria 30816
78 Ga0265314_10000029 3300031711 Bacteria 272506
79 Ga0265314_10001032 3300031711 Bacteria 32416
80 Ga0265314_10032544 3300031711 Bacteria 3835
81 Ga0265342_10000161 3300031712 Bacteria 75750
82 Ga0307405_10000765 3300031731 Bacteria 12571
83 Ga0307405_10023166 3300031731 Bacteria 3524
84 Ga0307413_10029678 3300031824 Bacteria 3063
85 Ga0307412_10001117 3300031911 Bacteria 15389
86 Ga0307412_10023225 3300031911 Bacteria 3812
87 Ga0307412_10042740 3300031911 Bacteria 2947
88 Ga0307412_10051064 3300031911 Bacteria 2731
89 Ga0307414_10025459 3300032004 Bacteria 3791
90 Ga0307411_10023494 3300032005 Bacteria 3653
91 Ga0307411_10049692 3300032005 Bacteria 2727
92 Ga0373959_0031646 3300034820 Bacteria 1072
93 Ga0373951_0009141 3300035091 Bacteria 2233
94 Ga0373939_0000219 3300035114 Bacteria 15660
95 Ga0373960_0004077 3300035121 Bacteria 3338
96 Ga0373931_0000827 3300035691 Bacteria 12984
97 Ga0395899_0001730 3300037312 Bacteria 18156
98 Ga0395900_0035661 3300037418 Bacteria 5124
99 Ga0395898_0046048 3300037466 Bacteria 4285
100 Ga0395905_0000027 3300037471 Bacteria 297239
101 Ga0395905_0001331 3300037471 Bacteria 30156
102 Ga0395905_0015074 3300037471 Bacteria 7362
103 Ga0395905_0018757 3300037471 Bacteria 6562
104 Ga0395905_0027941 3300037471 Bacteria 5319
105 Ga0395905_0060383 3300037471 Bacteria 3545
106 Ga0395901_0028659 3300038443 Bacteria 5727
107 Ga0395901_0265141 3300038443 Bacteria 1787
108 Ga0436361_0773293 3300039447 Bacteria 38992
109 Ga0436361_0947109 3300039447 Bacteria 78044
110 Ga0439447_011863 3300041407 Bacteria 2524
111 Ga0439466_0001942 3300041411 Bacteria 8112
112 Ga0439466_0035842 3300041411 Bacteria 1677
113 Ga0439466_0041030 3300041411 Bacteria 1545
114 Ga0439465_0006213 3300041413 Bacteria 3797
115 Ga0439465_0061656 3300041413 Bacteria 1244
116 Ga0451793_1141657 3300041452 Bacteria 1753
117 Ga0451804_0470728 3300041463 Bacteria 1247
118 Ga0439432_009780 3300042006 Unclassified 3336
119 Ga0439449_0028819 3300042007 Bacteria 2069
120 Ga0439451_002669 3300042009 Bacteria 3621
121 Ga0439452_006849 3300042010 Bacteria 3537
122 Ga0439456_003504 3300042013 Bacteria 3183
123 Ga0439463_000635 3300042016 Bacteria 9719
124 Ga0450922_001017 3300042124 Bacteria 2814
125 Ga0450888_000571 3300042126 Bacteria 3480
126 Ga0450890_005490 3300042127 Bacteria 1629
127 Ga0450891_005114 3300042129 Bacteria 1214
128 Ga0450892_001335 3300042130 Bacteria 2470
129 Ga0450889_002357 3300042144 Bacteria 1884
130 Ga0450910_015874 3300042147 Bacteria 1110
131 Ga0466966_0042511 3300044684 Bacteria 2916
132 Ga0466961_0095080 3300044693 Bacteria 1879
133 Ga0453684_0167454 3300044712 Bacteria 2593
134 Ga0466970_0026526 3300044765 Bacteria 3036
135 Ga0466959_0016579 3300045049 Bacteria 5386
136 Ga0451576_0118529 3300045051 Bacteria 2755
137 Ga0451576_0273504 3300045051 Bacteria 1766
138 Ga0495617_039413 3300046452 Bacteria 1580
139 Ga0495627_001285 3300046453 Bacteria 15434
140 Ga0495627_001889 3300046453 Bacteria 11020
141 Ga0495591_008550 3300046458 Bacteria 4181
142 Ga0495651_0001572 3300046462 Bacteria 17661
143 Ga0495653_0155316 3300046463 Bacteria 1594
144 Ga0495650_0010742 3300046471 Bacteria 5087
145 Ga0495650_0016310 3300046471 Bacteria 3768
146 Ga0495605_0044460 3300046474 Bacteria 2196
147 Ga0495584_0015223 3300046491 Bacteria 3917
148 Ga0495585_0129975 3300046492 Bacteria 1326
149 Ga0495583_0000257 3300046506 Bacteria 87964
150 Ga0495583_0003238 3300046506 Bacteria 12699
151 Ga0495606_0014255 3300046507 Bacteria 6216
152 Ga0495608_0101864 3300046511 Bacteria 1851
153 Ga0495610_0003624 3300046512 Bacteria 11897
154 Ga0495616_0002306 3300046513 Bacteria 12768
155 Ga0495628_0000524 3300046516 Bacteria 35187
156 Ga0495630_0159061 3300046517 Bacteria 1720
157 Ga0495631_0003269 3300046518 Bacteria 8910
158 Ga0495632_0007707 3300046519 Bacteria 6724
159 Ga0495632_0009182 3300046519 Bacteria 5976
160 Ga0495632_0020111 3300046519 Bacteria 3622
161 Ga0495637_0010134 3300046520 Bacteria 4571
162 Ga0495652_0002166 3300046529 Bacteria 20646
163 Ga0495654_0001660 3300046530 Bacteria 15059
164 Ga0495654_0003598 3300046530 Bacteria 9433
165 Ga0495654_0004186 3300046530 Bacteria 8634
166 Ga0495640_0028261 3300046533 Unclassified 4039
167 Ga0495587_0000766 3300046536 Bacteria 21421
168 Ga0495597_0012326 3300046542 Bacteria 4124
169 Ga0495645_0103669 3300046543 Bacteria 2021
170 Ga0495645_0111069 3300046543 Bacteria 1940
171 Ga0495633_0032039 3300046558 Bacteria 2542
172 Ga0495667_0024974 3300046559 Bacteria 4026
173 Ga0495625_0002460 3300046660 Bacteria 20016
174 Ga0495661_0000384 3300046665 Bacteria 47272
175 Ga0495661_0005078 3300046665 Bacteria 9390
176 Ga0495661_0065126 3300046665 Bacteria 2148
177 Ga0495599_0078449 3300046678 Bacteria 2062
178 Ga0495671_0014819 3300046692 Bacteria 4188
179 Ga0495589_0006084 3300046794 Bacteria 6375
180 Ga0495660_0097244 3300046810 Bacteria 1520
181 Ga0495604_0001169 3300047317 Bacteria 21698
182 Ga0495636_0135220 3300047318 Bacteria 1098
183 Ga0495674_0081165 3300047319 Unclassified 2782
184 Ga0495672_0003496 3300047320 Bacteria 13405
185 Ga0495680_0156001 3300047322 Bacteria 1660
186 Ga0495683_0000272 3300047323 Bacteria 45419
187 Ga0495675_0000236 3300047444 Bacteria 39933
188 Ga0495679_000745 3300047446 Bacteria 20869
189 Ga0495673_0012932 3300047469 Bacteria 4400
190 Ga0495681_0061747 3300047470 Bacteria 1725
191 Ga0495602_0057608 3300048088 Bacteria 3407
192 Ga0496110_0132981 3300048913 Bacteria 2247
193 Ga0496112_0089834 3300048915 Bacteria 3040
194 Ga0496117_0009546 3300048920 Bacteria 9004
195 Ga0496117_0213679 3300048920 Bacteria 1079
196 Ga0496118_0029332 3300048921 Bacteria 4615
197 Ga0496118_0030938 3300048921 Bacteria 4452
198 Ga0496120_0040477 3300048923 Bacteria 2738
199 Ga0496121_0019427 3300048924 Bacteria 6793
200 Ga0496122_0029808 3300048925 Bacteria 4589
201 Ga0496123_0170251 3300048926 Bacteria 1150
202 Ga0496124_0066286 3300048927 Bacteria 3007
203 Ga0496124_0233358 3300048927 Bacteria 1373
204 Ga0496125_0068307 3300048928 Bacteria 2796
205 Ga0496125_0075747 3300048928 Bacteria 2602
206 Ga0496126_0029998 3300048929 Bacteria 5160
207 Ga0501297_012732 3300049520 Bacteria 981
208 Ga0501034_0169128 3300049571 Bacteria 2154
209 Ga0501046_0164400 3300049580 Bacteria 1668
210 Ga0501074_0113688 3300049590 Bacteria 1937
211 Ga0501199_004023 3300049650 Bacteria 1435
212 Ga0501201_006634 3300049651 Bacteria 1099
213 Ga0501217_020588 3300049661 Bacteria 1551
214 Ga0501222_000860 3300049662 Bacteria 4385
215 Ga0501223_019506 3300049663 Bacteria 1332
216 Ga0501235_003426 3300049669 Bacteria 3433
217 Ga0501236_004873 3300049670 Bacteria 1607
218 Ga0501221_000033 3300049704 Bacteria 13541
219 Ga0501229_000039 3300049706 Bacteria 12869
220 Ga0501268_024714 3300049765 Bacteria 1051
221 Ga0501269_002758 3300049766 Bacteria 2142
222 Ga0501272_000925 3300049769 Bacteria 2672
223 Ga0501274_005702 3300049771 Bacteria 1059
224 Ga0501283_007037 3300049779 Bacteria 1592
225 Ga0501226_002279 3300049853 Bacteria 2356
226 nmdc:mga0k408_107702_c1 3300050493 Bacteria 1646
227 nmdc:mga0k408_15640_c1 3300050493 Bacteria 4198
228 nmdc:mga0k408_97488_c1 3300050493 Bacteria 1731
229 nmdc:mga07m45_1216_c1 3300050496 Bacteria 11670
230 Ga0500635_0054465 3300053080 Bacteria 1379
231 Ga0500578_0000006 3300053086 Bacteria 234598
232 Ga0500652_001508 3300053131 Bacteria 7149
233 Ga0500568_0025857 3300053139 Bacteria 2469
234 Ga0500604_0018825 3300053151 Bacteria 1928
235 Ga0500622_0002520 3300053156 Bacteria 13153
236 Ga0500634_0055230 3300053161 Bacteria 2124

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037471 Ga0395905_0001331 Ga0395905_0001331_17015_17917 256
2 3300031235 Ga0265330_10000012 Ga0265330_10000012135 264
3 3300031238 Ga0265332_10000012 Ga0265332_10000012135 264
4 3300031241 Ga0265325_10008795 Ga0265325_100087954 264
5 3300031711 Ga0265314_10000029 Ga0265314_10000029122 264
6 3300031235 Ga0265330_10005977 Ga0265330_100059776 265
7 3300031238 Ga0265332_10020683 Ga0265332_100206832 265
8 3300031242 Ga0265329_10037731 Ga0265329_100377312 265
9 3300031250 Ga0265331_10060093 Ga0265331_100600932 265
10 3300031711 Ga0265314_10001032 Ga0265314_1000103216 265
11 3300044684 Ga0466966_0042511 Ga0466966_0042511_1906_2796 265
12 3300044693 Ga0466961_0095080 Ga0466961_0095080_138_1028 265
13 3300044765 Ga0466970_0026526 Ga0466970_0026526_1143_2033 265
14 3300045049 Ga0466959_0016579 Ga0466959_0016579_3651_4541 265
15 3300046463 Ga0495653_0155316 Ga0495653_0155316_689_1561 273
16 3300049590 Ga0501074_0113688 Ga0501074_0113688_561_1475 275
17 3300046474 Ga0495605_0044460 Ga0495605_0044460_729_1583 276
18 3300049771 Ga0501274_005702 Ga0501274_005702_205_1035 276
19 3300045051 Ga0451576_0118529 Ga0451576_0118529_1113_1955 277
20 iso_pu_bacteria 2899275550 2899276946 278
21 3300046506 Ga0495583_0000257 Ga0495583_0000257_45057_45914 280
22 3300003320 rootH2_10023198 rootH2_100231983 282
23 3300005614 Ga0068856_100023741 Ga0068856_1000237412 282
24 3300026078 Ga0207702_10287707 Ga0207702_102877072 282
25 3300031911 Ga0307412_10042740 Ga0307412_100427402 282
26 3300042006 Ga0439432_009780 Ga0439432_009780_306_1190 282
27 3300031247 Ga0265340_10001710 Ga0265340_1000171012 284
28 3300031249 Ga0265339_10008636 Ga0265339_100086362 284
29 3300031595 Ga0265313_10000847 Ga0265313_100008478 284
30 3300049580 Ga0501046_0164400 Ga0501046_0164400_352_1272 284
31 iso_pu_bacteria 2599185288 2599882502 284
32 iso_pu_bacteria 2599185303 2599950573 284
33 iso_pu_bacteria 2675903420 2677898361 284
34 iso_pu_bacteria 2728369097 2729147043 284
35 iso_pu_bacteria 2738541294 2738808075 284
36 iso_pu_bacteria 2738541309 2738895435 284
37 iso_pu_bacteria 2808606385 2808976819 284
38 iso_pu_bacteria 2808606388 2808991743 284
39 iso_pu_bacteria 2852612431 2852616901 284
40 iso_pu_bacteria 2852667396 2852672110 284
41 iso_pu_bacteria 640427133 640486037 284
42 iso_pu_bacteria 651053060 651173956 284
43 iso_pu_bacteria 8055817908 8055818188 284
44 3300041413 Ga0439465_0006213 Ga0439465_0006213_2334_3230 285
45 3300041413 Ga0439465_0061656 Ga0439465_0061656_243_1139 285
46 3300042007 Ga0439449_0028819 Ga0439449_0028819_496_1392 285
47 3300048927 Ga0496124_0066286 Ga0496124_0066286_1681_2550 285
48 3300003781 Ga0055536_1000109 Ga0055536_100010939 288
49 3300003791 Ga0055530_10000034 Ga0055530_1000003442 288
50 3300003792 Ga0055540_1000658 Ga0055540_100065821 288
51 3300005288 Ga0065714_10044851 Ga0065714_100448512 288
52 3300009011 Ga0105251_10002706 Ga0105251_1000270611 288
53 3300009092 Ga0105250_10000325 Ga0105250_1000032538 288
54 3300013100 Ga0157373_10004231 Ga0157373_100042315 288
55 3300013100 Ga0157373_10028145 Ga0157373_100281452 288
56 3300013105 Ga0157369_10012488 Ga0157369_100124882 288
57 3300017792 Ga0163161_10043240 Ga0163161_100432403 288
58 3300017792 Ga0163161_10090551 Ga0163161_100905513 288
59 3300025292 Ga0209676_1000032 Ga0209676_1000032197 288
60 3300025298 Ga0209050_1000025 Ga0209050_1000025198 288
61 3300025303 Ga0209051_1000039 Ga0209051_100003979 288
62 3300025303 Ga0209051_1000047 Ga0209051_100004779 288
63 3300025711 Ga0207696_1000386 Ga0207696_100038639 288
64 3300031548 Ga0307408_100001094 Ga0307408_10000109418 288
65 3300031548 Ga0307408_100012140 Ga0307408_1000121402 288
66 3300031731 Ga0307405_10000765 Ga0307405_1000076510 288
67 3300031731 Ga0307405_10023166 Ga0307405_100231664 288
68 3300031824 Ga0307413_10029678 Ga0307413_100296783 288
69 3300031911 Ga0307412_10001117 Ga0307412_100011173 288
70 3300031911 Ga0307412_10023225 Ga0307412_100232252 288
71 3300031911 Ga0307412_10051064 Ga0307412_100510642 288
72 3300032004 Ga0307414_10025459 Ga0307414_100254593 288
73 3300032005 Ga0307411_10049692 Ga0307411_100496922 288
74 3300037471 Ga0395905_0060383 Ga0395905_0060383_814_1698 288
75 3300041407 Ga0439447_011863 Ga0439447_011863_1241_2122 288
76 3300041411 Ga0439466_0001942 Ga0439466_0001942_1867_2748 288
77 3300041411 Ga0439466_0035842 Ga0439466_0035842_625_1494 288
78 3300041411 Ga0439466_0041030 Ga0439466_0041030_45_926 288
79 3300042009 Ga0439451_002669 Ga0439451_002669_2669_3550 288
80 3300042010 Ga0439452_006849 Ga0439452_006849_1114_1995 288
81 3300042013 Ga0439456_003504 Ga0439456_003504_427_1308 288
82 3300042016 Ga0439463_000635 Ga0439463_000635_1184_2065 288
83 3300042124 Ga0450922_001017 Ga0450922_001017_1250_2131 288
84 3300042147 Ga0450910_015874 Ga0450910_015874_20_901 288
85 3300046452 Ga0495617_039413 Ga0495617_039413_606_1475 288
86 3300046453 Ga0495627_001285 Ga0495627_001285_12802_13686 288
87 3300046453 Ga0495627_001889 Ga0495627_001889_8491_9372 288
88 3300046458 Ga0495591_008550 Ga0495591_008550_949_1830 288
89 3300046471 Ga0495650_0010742 Ga0495650_0010742_189_1073 288
90 3300046471 Ga0495650_0016310 Ga0495650_0016310_148_1017 288
91 3300046491 Ga0495584_0015223 Ga0495584_0015223_2922_3791 288
92 3300046492 Ga0495585_0129975 Ga0495585_0129975_239_1108 288
93 3300046506 Ga0495583_0003238 Ga0495583_0003238_10324_11193 288
94 3300046507 Ga0495606_0014255 Ga0495606_0014255_3841_4710 288
95 3300046512 Ga0495610_0003624 Ga0495610_0003624_1197_2066 288
96 3300046513 Ga0495616_0002306 Ga0495616_0002306_5280_6149 288
97 3300046518 Ga0495631_0003269 Ga0495631_0003269_7783_8667 288
98 3300046519 Ga0495632_0009182 Ga0495632_0009182_4995_5879 288
99 3300046519 Ga0495632_0020111 Ga0495632_0020111_433_1317 288
100 3300046520 Ga0495637_0010134 Ga0495637_0010134_977_1846 288
101 3300046530 Ga0495654_0001660 Ga0495654_0001660_12499_13383 288
102 3300046530 Ga0495654_0003598 Ga0495654_0003598_1543_2412 288
103 3300046530 Ga0495654_0004186 Ga0495654_0004186_240_1109 288
104 3300046542 Ga0495597_0012326 Ga0495597_0012326_2162_3043 288
105 3300046543 Ga0495645_0103669 Ga0495645_0103669_358_1233 288
106 3300046558 Ga0495633_0032039 Ga0495633_0032039_1358_2227 288
107 3300046660 Ga0495625_0002460 Ga0495625_0002460_8991_9860 288
108 3300046665 Ga0495661_0000384 Ga0495661_0000384_27812_28693 288
109 3300046665 Ga0495661_0005078 Ga0495661_0005078_3732_4601 288
110 3300046665 Ga0495661_0065126 Ga0495661_0065126_50_919 288
111 3300046692 Ga0495671_0014819 Ga0495671_0014819_3095_3979 288
112 3300046794 Ga0495589_0006084 Ga0495589_0006084_4479_5348 288
113 3300046810 Ga0495660_0097244 Ga0495660_0097244_18_887 288
114 3300047320 Ga0495672_0003496 Ga0495672_0003496_10721_11605 288
115 3300047323 Ga0495683_0000272 Ga0495683_0000272_24147_25016 288
116 3300047446 Ga0495679_000745 Ga0495679_000745_5204_6073 288
117 3300047469 Ga0495673_0012932 Ga0495673_0012932_3167_4036 288
118 3300047470 Ga0495681_0061747 Ga0495681_0061747_397_1278 288
119 3300048915 Ga0496112_0089834 Ga0496112_0089834_1063_1944 288
120 3300048920 Ga0496117_0009546 Ga0496117_0009546_1825_2694 288
121 3300048920 Ga0496117_0213679 Ga0496117_0213679_159_1040 288
122 3300048921 Ga0496118_0029332 Ga0496118_0029332_1290_2159 288
123 3300048921 Ga0496118_0030938 Ga0496118_0030938_2457_3326 288
124 3300048923 Ga0496120_0040477 Ga0496120_0040477_1473_2342 288
125 3300048924 Ga0496121_0019427 Ga0496121_0019427_4295_5164 288
126 3300048925 Ga0496122_0029808 Ga0496122_0029808_2935_3816 288
127 3300048928 Ga0496125_0068307 Ga0496125_0068307_1808_2677 288
128 3300048928 Ga0496125_0075747 Ga0496125_0075747_530_1411 288
129 3300048929 Ga0496126_0029998 Ga0496126_0029998_903_1772 288
130 3300049766 Ga0501269_002758 Ga0501269_002758_382_1263 288
131 3300049853 Ga0501226_002279 Ga0501226_002279_744_1625 288
132 3300053161 Ga0500634_0055230 Ga0500634_0055230_930_1799 288
133 iso_pu_bacteria 2512047018 2512327828 288
134 iso_pu_bacteria 2582580891 2583789957 288
135 iso_pu_bacteria 2597489887 2597855504 288
136 iso_pu_bacteria 2599185185 2599485388 288
137 iso_pu_bacteria 2599185257 2599806533 288
138 iso_pu_bacteria 2600254931 2600368108 288
139 iso_pu_bacteria 2671180172 2671772184 288
140 iso_pu_bacteria 2740892503 2743734918 288
141 iso_pu_bacteria 2808606361 2808857862 288
142 iso_pu_bacteria 2808606376 2808923847 288
143 iso_pu_bacteria 2808606378 2808938060 288
144 iso_pu_bacteria 2808606380 2808945768 288
145 iso_pu_bacteria 2808606383 2808966313 288
146 iso_pu_bacteria 2808606389 2809001238 288
147 iso_pu_bacteria 2842854478 2842858805 288
148 iso_pu_bacteria 2923153595 2923153909 288
149 iso_pu_bacteria 2984286254 2984292180 288
150 iso_pu_bacteria 2988728565 2988732045 288
151 iso_pu_bacteria 3007866637 3007870754 288
152 iso_pu_bacteria 8015687852 8015688168 288
153 iso_pu_bacteria 8056143049 8056143563 288
154 3300028794 Ga0307515_10118352 Ga0307515_101183523 289
155 3300031456 Ga0307513_10008378 Ga0307513_1000837812 289
156 3300037471 Ga0395905_0018757 Ga0395905_0018757_4880_5767 289
157 3300038443 Ga0395901_0265141 Ga0395901_0265141_398_1285 289
158 iso_pu_bacteria 2585428057 2587725086 289
159 iso_pu_bacteria 2585428058 2587731553 289
160 iso_pu_bacteria 2588253510 2588295199 289
161 iso_pu_bacteria 2643221544 2643743818 289
162 iso_pu_bacteria 2643221585 2643937224 289
163 iso_pu_bacteria 2643221592 2643967025 289
164 iso_pu_bacteria 2643221625 2644142606 289
165 iso_pu_bacteria 2643221639 2644222733 289
166 iso_pu_bacteria 2643221646 2644260660 289
167 iso_pu_bacteria 2643221648 2644271131 289
168 iso_pu_bacteria 2643221656 2644318389 289
169 iso_pu_bacteria 2738541337 2739056445 289
170 iso_pu_bacteria 2842747753 2842749871 289
171 3300003323 rootH1_10084501 rootH1_100845012 290
172 3300037312 Ga0395899_0001730 Ga0395899_0001730_12368_13258 290
173 3300037418 Ga0395900_0035661 Ga0395900_0035661_1274_2164 290
174 3300037466 Ga0395898_0046048 Ga0395898_0046048_3126_4016 290
175 3300037471 Ga0395905_0000027 Ga0395905_0000027_204258_205148 290
176 3300037471 Ga0395905_0027941 Ga0395905_0027941_1694_2584 290
177 3300038443 Ga0395901_0028659 Ga0395901_0028659_4100_4990 290
178 3300046462 Ga0495651_0001572 Ga0495651_0001572_3541_4473 291
179 3300046511 Ga0495608_0101864 Ga0495608_0101864_506_1438 291
180 3300046516 Ga0495628_0000524 Ga0495628_0000524_31906_32838 291
181 3300046517 Ga0495630_0159061 Ga0495630_0159061_700_1632 291
182 3300046529 Ga0495652_0002166 Ga0495652_0002166_844_1776 291
183 3300046533 Ga0495640_0028261 Ga0495640_0028261_982_1914 291
184 3300046536 Ga0495587_0000766 Ga0495587_0000766_17122_18054 291
185 3300046543 Ga0495645_0111069 Ga0495645_0111069_681_1613 291
186 3300046559 Ga0495667_0024974 Ga0495667_0024974_1318_2250 291
187 3300046678 Ga0495599_0078449 Ga0495599_0078449_294_1226 291
188 3300047317 Ga0495604_0001169 Ga0495604_0001169_20569_21501 291
189 3300047319 Ga0495674_0081165 Ga0495674_0081165_486_1418 291
190 3300047322 Ga0495680_0156001 Ga0495680_0156001_705_1637 291
191 3300047444 Ga0495675_0000236 Ga0495675_0000236_29573_30505 291
192 3300048088 Ga0495602_0057608 Ga0495602_0057608_1042_1974 291
193 3300028563 Ga0265319_1000301 Ga0265319_10003014 292
194 3300028577 Ga0265318_10000122 Ga0265318_1000012254 292
195 3300031242 Ga0265329_10000720 Ga0265329_100007204 292
196 3300031247 Ga0265340_10033752 Ga0265340_100337522 292
197 3300031249 Ga0265339_10019141 Ga0265339_100191414 292
198 3300031250 Ga0265331_10000028 Ga0265331_1000002831 292
199 3300031344 Ga0265316_10027007 Ga0265316_100270072 292
200 3300031711 Ga0265314_10032544 Ga0265314_100325443 292
201 3300031712 Ga0265342_10000161 Ga0265342_1000016127 292
202 3300044712 Ga0453684_0167454 Ga0453684_0167454_410_1312 292
203 3300003316 rootH1_10035624 rootH1_100356241 293
204 3300003323 rootH1_10053800 rootH1_100538002 293
205 3300003794 Ga0055531_10000007 Ga0055531_1000000786 293
206 3300005262 Ga0065165_1005965 Ga0065165_10059652 293
207 3300005289 Ga0065704_10099018 Ga0065704_100990182 293
208 3300005577 Ga0068857_100401299 Ga0068857_1004012992 293
209 3300006042 Ga0075368_10020831 Ga0075368_100208313 293
210 3300006178 Ga0075367_10060515 Ga0075367_100605152 293
211 3300006195 Ga0075366_10005684 Ga0075366_100056846 293
212 3300006195 Ga0075366_10145557 Ga0075366_101455571 293
213 3300014497 Ga0182008_10000156 Ga0182008_1000015620 293
214 3300021361 Ga0213872_10000093 Ga0213872_1000009333 293
215 3300021361 Ga0213872_10000105 Ga0213872_1000010516 293
216 3300025245 Ga0207425_1002094 Ga0207425_10020944 293
217 3300025258 Ga0209129_1000027 Ga0209129_1000027294 293
218 3300025263 Ga0209565_1008097 Ga0209565_10080972 293
219 3300025273 Ga0209673_1007558 Ga0209673_10075585 293
220 3300025295 Ga0209564_1000014 Ga0209564_1000014488 293
221 3300025297 Ga0209758_1000193 Ga0209758_100019382 293
222 3300025297 Ga0209758_1000208 Ga0209758_100020843 293
223 3300025298 Ga0209050_1000198 Ga0209050_100019824 293
224 3300025298 Ga0209050_1013998 Ga0209050_10139983 293
225 3300025303 Ga0209051_1036984 Ga0209051_10369842 293
226 3300025304 Ga0209257_1000021 Ga0209257_1000021142 293
227 3300025304 Ga0209257_1010098 Ga0209257_10100981 293
228 3300025304 Ga0209257_1028099 Ga0209257_10280992 293
229 3300025735 Ga0207713_1003387 Ga0207713_10033873 293
230 3300025935 Ga0207709_10062137 Ga0207709_100621372 293
231 3300025961 Ga0207712_10274446 Ga0207712_102744462 293
232 3300027682 Ga0209971_1005316 Ga0209971_10053162 293
233 3300028786 Ga0307517_10106102 Ga0307517_101061023 293
234 3300028794 Ga0307515_10009616 Ga0307515_100096166 293
235 3300028794 Ga0307515_10139961 Ga0307515_101399614 293
236 3300028794 Ga0307515_10314456 Ga0307515_103144562 293
237 3300031548 Ga0307408_100000023 Ga0307408_10000002374 293
238 3300032005 Ga0307411_10023494 Ga0307411_100234944 293
239 3300034820 Ga0373959_0031646 Ga0373959_0031646_156_1037 293
240 3300035091 Ga0373951_0009141 Ga0373951_0009141_818_1699 293
241 3300035114 Ga0373939_0000219 Ga0373939_0000219_1620_2501 293
242 3300035121 Ga0373960_0004077 Ga0373960_0004077_1630_2511 293
243 3300035691 Ga0373931_0000827 Ga0373931_0000827_1608_2489 293
244 3300037471 Ga0395905_0015074 Ga0395905_0015074_1556_2440 293
245 3300039447 Ga0436361_0773293 Ga0436361_0773293_488_1378 293
246 3300039447 Ga0436361_0947109 Ga0436361_0947109_17831_18712 293
247 3300041452 Ga0451793_1141657 Ga0451793_1141657_488_1384 293
248 3300041463 Ga0451804_0470728 Ga0451804_0470728_151_1047 293
249 3300042126 Ga0450888_000571 Ga0450888_000571_2332_3213 293
250 3300042127 Ga0450890_005490 Ga0450890_005490_710_1594 293
251 3300042129 Ga0450891_005114 Ga0450891_005114_278_1162 293
252 3300042130 Ga0450892_001335 Ga0450892_001335_1206_2090 293
253 3300042144 Ga0450889_002357 Ga0450889_002357_186_1067 293
254 3300045051 Ga0451576_0273504 Ga0451576_0273504_172_1053 293
255 3300046519 Ga0495632_0007707 Ga0495632_0007707_2794_3690 293
256 3300047318 Ga0495636_0135220 Ga0495636_0135220_78_1001 293
257 3300048913 Ga0496110_0132981 Ga0496110_0132981_1116_2048 293
258 3300048926 Ga0496123_0170251 Ga0496123_0170251_58_951 293
259 3300048927 Ga0496124_0233358 Ga0496124_0233358_267_1160 293
260 3300049520 Ga0501297_012732 Ga0501297_012732_26_907 293
261 3300049571 Ga0501034_0169128 Ga0501034_0169128_25_915 293
262 3300049650 Ga0501199_004023 Ga0501199_004023_296_1177 293
263 3300049651 Ga0501201_006634 Ga0501201_006634_74_955 293
264 3300049661 Ga0501217_020588 Ga0501217_020588_539_1420 293
265 3300049662 Ga0501222_000860 Ga0501222_000860_1855_2736 293
266 3300049663 Ga0501223_019506 Ga0501223_019506_348_1229 293
267 3300049669 Ga0501235_003426 Ga0501235_003426_1136_2017 293
268 3300049670 Ga0501236_004873 Ga0501236_004873_212_1093 293
269 3300049704 Ga0501221_000033 Ga0501221_000033_3775_4656 293
270 3300049706 Ga0501229_000039 Ga0501229_000039_2016_2897 293
271 3300049765 Ga0501268_024714 Ga0501268_024714_63_944 293
272 3300049769 Ga0501272_000925 Ga0501272_000925_703_1584 293
273 3300049779 Ga0501283_007037 Ga0501283_007037_532_1413 293
274 3300050493 nmdc:mga0k408_107702_c1 nmdc:mga0k408_107702_c1_367_1248 293
275 3300050493 nmdc:mga0k408_15640_c1 nmdc:mga0k408_15640_c1_1712_2593 293
276 3300050493 nmdc:mga0k408_97488_c1 nmdc:mga0k408_97488_c1_449_1330 293
277 3300050496 nmdc:mga07m45_1216_c1 nmdc:mga07m45_1216_c1_713_1594 293
278 3300053080 Ga0500635_0054465 Ga0500635_0054465_93_989 293
279 3300053086 Ga0500578_0000006 Ga0500578_0000006_151145_152041 293
280 3300053131 Ga0500652_001508 Ga0500652_001508_2618_3514 293
281 3300053139 Ga0500568_0025857 Ga0500568_0025857_816_1712 293
282 3300053151 Ga0500604_0018825 Ga0500604_0018825_104_1000 293
283 3300053156 Ga0500622_0002520 Ga0500622_0002520_4027_4923 293

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04321

RmlD_sub_bind

RmlD substrate binding domain

34

327

0.98

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

36

213

0.9

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

59

189

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ctr-assembly4.cif.gz_D crystal structure of dtdp-4-dehydrorhamnose reductase from klebsiella pneumoniae with bound nadp 0.9846 1 290
1kbz-assembly1.cif.gz_A crystal structure of apo-dtdp-6-deoxy-l-lyxo-4-hexulose reductase (rmld) from salmonella enterica serovar typhimurium 0.9805 1 290
8ctr-assembly4.cif.gz_D crystal structure of dtdp-4-dehydrorhamnose reductase from klebsiella pneumoniae with bound nadp 0.9779 1 290
1kbz-assembly1.cif.gz_A crystal structure of apo-dtdp-6-deoxy-l-lyxo-4-hexulose reductase (rmld) from salmonella enterica serovar typhimurium 0.9738 1 290
1vl0-assembly1.cif.gz_B crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution 0.9369 1 290
ID Description Score Start End Superfamily
1kc0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.98 1 290 3.40.50.720
1kc0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9733 1 290 3.40.50.720
1n2sA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9517 1 277 3.40.50.720
1n2sA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9473 1 277 3.40.50.720
1vl0B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9236 3 212 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1A9HVD2-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.997 1 291 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A1A9HVD2-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9936 1 291 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A3A3G0U2-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9898 1 291 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A7H0GNV5-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9888 1 291 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A235C6H7-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9886 1 145 GO:0005829
GO:0008831
GO:0009243
GO:0019305
GO:0045226

Feature Viewer

pLDDT pTM Quality
97.07 0.93 High
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Predicted Structure (AlphaFold2)

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