F385464

General Info

Members Datasets Scaffolds Average Seq Length
283 193 566 257

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10037578|Ga0081455_100375786
Length 281
Sequence VSEIWPSRQRPDIARLASMSEETTRSAPVLGIDIGGSGIKGAPVDLATGEFTSKRLRITTPNKSTPKNVATVVAEIVESFAAMIGDGPIGVTIPAVVTHGKTRSAANIDKSWIDADAEKIFEDQLGREILLVNDADAAGIAEVHYGAAAGHPGLVLMTTLGTGIGTAIVYRGVLIPNSELGHIEVDGHDAETRAAASIREREGLSYGEYAARLQRYYQRLEALMWPDLIVIGGGISKHSDKFIPKLKLNAEVVPAKLLNTAGIVGAAWLAADRQIHPDELR

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
84 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
91 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
92 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
93 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
94 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
95 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
96 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
97 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
102 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
105 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
106 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
107 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
108 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
109 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
110 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
111 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
112 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
113 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
114 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
115 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
116 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
117 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
118 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
119 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
126 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
127 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
135 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
136 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
137 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
138 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
152 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
153 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
154 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
155 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
156 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
157 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
163 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
166 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
171 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
174 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
175 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
176 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
177 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
178 2643221566 Microbacterium sp. Root166 Isolate Unclassified
179 2643221613 Oerskovia sp. Root22 Isolate Unclassified
180 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
181 2643221721 Oerskovia sp. Root918 Isolate Unclassified
182 2739367653 Kocuria sp. OV113 Isolate Unclassified
183 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
184 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
185 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
186 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
187 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
188 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
189 2857727296 Kocuria sp. R-72562 Isolate Unclassified
190 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
191 2920879853 Kocuria salina CV6 Isolate Unclassified
192 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
193 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.35
Metatranscriptomes 0
Isolates 5.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.12
Nodule 0.71
Rhizoplane 7.07
Rhizosphere 82.69
Stem 0
Stem Tuber 0
Unclassified 1.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10037578 3300005937 Bacteria 4297
2 JGI25406J46586_10008773 3300003203 Bacteria 4555
3 JGI25405J52794_10013284 3300003911 Bacteria 1595
4 Ga0070683_100178608 3300005329 Bacteria 2015
5 Ga0068869_100108809 3300005334 Bacteria 2106
6 Ga0070682_100002589 3300005337 Bacteria 9990
7 Ga0070682_100334153 3300005337 Bacteria 1124
8 Ga0070691_10057757 3300005341 Bacteria 1862
9 Ga0070668_100018746 3300005347 Bacteria 5197
10 Ga0070668_100161743 3300005347 Bacteria 1817
11 Ga0070668_100390710 3300005347 Bacteria 1186
12 Ga0070674_100016540 3300005356 Bacteria 4624
13 Ga0070659_100156540 3300005366 Bacteria 1861
14 Ga0070714_100552102 3300005435 Bacteria 1103
15 Ga0070705_100019478 3300005440 Bacteria 3571
16 Ga0070700_100094072 3300005441 Unclassified 1962
17 Ga0070662_100006151 3300005457 Bacteria 7718
18 Ga0070662_100117556 3300005457 Bacteria 2034
19 Ga0070681_10166084 3300005458 Bacteria 2130
20 Ga0070685_10160528 3300005466 Bacteria 1432
21 Ga0070679_100725565 3300005530 Bacteria 937
22 Ga0070684_100332791 3300005535 Bacteria 1396
23 Ga0070696_100051414 3300005546 Bacteria 2866
24 Ga0070693_100274083 3300005547 Bacteria 1127
25 Ga0068855_100420039 3300005563 Bacteria 1463
26 Ga0068854_100117006 3300005578 Bacteria 2018
27 Ga0068856_100767524 3300005614 Bacteria 984
28 Ga0070702_100023495 3300005615 Bacteria 3276
29 Ga0070702_100368661 3300005615 Bacteria 1017
30 Ga0068866_10015645 3300005718 Bacteria 3373
31 Ga0068866_10050969 3300005718 Bacteria 2105
32 Ga0068861_100145570 3300005719 Bacteria 1939
33 Ga0068860_100623345 3300005843 Bacteria 1085
34 Ga0081455_10000740 3300005937 Bacteria 42421
35 Ga0081539_10000202 3300005985 Bacteria 138350
36 Ga0075365_10113882 3300006038 Bacteria 1861
37 Ga0075432_10000111 3300006058 Bacteria 17776
38 Ga0075432_10000199 3300006058 Bacteria 15725
39 Ga0075432_10005958 3300006058 Bacteria 4149
40 Ga0075428_100011910 3300006844 Bacteria 9674
41 Ga0075428_100176477 3300006844 Bacteria 2314
42 Ga0075428_100247736 3300006844 Bacteria 1921
43 Ga0075430_100022939 3300006846 Bacteria 5309
44 Ga0075431_100009214 3300006847 Bacteria 9906
45 Ga0075433_10000805 3300006852 Bacteria 21784
46 Ga0075433_10005329 3300006852 Bacteria 10090
47 Ga0075434_100000012 3300006871 Bacteria 83539
48 Ga0075434_100000586 3300006871 Bacteria 28076
49 Ga0075434_100300673 3300006871 Bacteria 1625
50 Ga0068865_100005471 3300006881 Bacteria 7705
51 Ga0068865_100093741 3300006881 Bacteria 2184
52 Ga0075436_100040090 3300006914 Bacteria 3232
53 Ga0075435_100001261 3300007076 Bacteria 16237
54 Ga0075435_100014648 3300007076 Bacteria 5873
55 Ga0111539_10001961 3300009094 Bacteria 27463
56 Ga0111539_10004582 3300009094 Bacteria 18065
57 Ga0105245_10072241 3300009098 Bacteria 3134
58 Ga0105245_10605505 3300009098 Bacteria 1122
59 Ga0114129_10055140 3300009147 Bacteria 5572
60 Ga0105243_10012899 3300009148 Bacteria 6315
61 Ga0105243_10436596 3300009148 Bacteria 1225
62 Ga0105242_10030242 3300009176 Bacteria 4324
63 Ga0105242_10117600 3300009176 Bacteria 2276
64 Ga0105248_10265515 3300009177 Bacteria 1932
65 Ga0105237_10111143 3300009545 Bacteria 2732
66 Ga0105238_10326583 3300009551 Bacteria 1520
67 Ga0105238_10377937 3300009551 Bacteria 1408
68 Ga0105249_10049540 3300009553 Bacteria 3830
69 Ga0105249_10479214 3300009553 Bacteria 1287
70 Ga0105249_10545636 3300009553 Bacteria 1209
71 Ga0105249_10714792 3300009553 Bacteria 1062
72 Ga0105239_10386591 3300010375 Bacteria 1582
73 Ga0105239_10765267 3300010375 Bacteria 1105
74 Ga0157369_10548034 3300013105 Bacteria 1195
75 Ga0157369_10894569 3300013105 Bacteria 911
76 Ga0163162_10024281 3300013306 Bacteria 5983
77 Ga0163162_10039391 3300013306 Bacteria 4722
78 Ga0163162_10281997 3300013306 Bacteria 1793
79 Ga0163162_10381524 3300013306 Bacteria 1543
80 Ga0157372_10041043 3300013307 Bacteria 5115
81 Ga0157372_10289338 3300013307 Bacteria 1905
82 Ga0157372_10310010 3300013307 Bacteria 1837
83 Ga0157372_10680796 3300013307 Bacteria 1197
84 Ga0157372_10764519 3300013307 Bacteria 1123
85 Ga0157380_10030110 3300014326 Unclassified 4155
86 Ga0157380_10277554 3300014326 Bacteria 1531
87 Ga0157377_10006944 3300014745 Bacteria 5434
88 Ga0209758_1002138 3300025297 Bacteria 20823
89 Ga0207642_10040612 3300025899 Bacteria 2031
90 Ga0207688_10001148 3300025901 Bacteria 13654
91 Ga0207688_10185857 3300025901 Bacteria 1241
92 Ga0207660_10247105 3300025917 Bacteria 1407
93 Ga0207652_10334292 3300025921 Bacteria 1368
94 Ga0207687_10178790 3300025927 Bacteria 1642
95 Ga0207690_10181101 3300025932 Bacteria 1586
96 Ga0207706_10001585 3300025933 Bacteria 22585
97 Ga0207709_10150816 3300025935 Bacteria 1610
98 Ga0207709_10271691 3300025935 Bacteria 1248
99 Ga0207704_10103373 3300025938 Bacteria 1905
100 Ga0207704_10143958 3300025938 Bacteria 1672
101 Ga0207661_10157439 3300025944 Bacteria 1969
102 Ga0207661_10258942 3300025944 Bacteria 1549
103 Ga0207712_10031982 3300025961 Bacteria 3548
104 Ga0207712_10335413 3300025961 Bacteria 1252
105 Ga0207640_10109911 3300025981 Unclassified 1951
106 Ga0207675_100025615 3300026118 Bacteria 5489
107 Ga0207698_10351116 3300026142 Bacteria 1393
108 Ga0207428_10000607 3300027907 Bacteria 42448
109 Ga0207428_10000884 3300027907 Bacteria 33619
110 Ga0265334_10000596 3300028573 Bacteria 18250
111 Ga0307408_100013654 3300031548 Bacteria 5394
112 Ga0307408_100236390 3300031548 Bacteria 1499
113 Ga0307405_10002784 3300031731 Bacteria 7846
114 Ga0307405_10071792 3300031731 Bacteria 2229
115 Ga0307405_10150973 3300031731 Bacteria 1633
116 Ga0307413_10011093 3300031824 Bacteria 4409
117 Ga0307413_10034078 3300031824 Bacteria 2906
118 Ga0307413_10157536 3300031824 Bacteria 1591
119 Ga0307410_10000454 3300031852 Bacteria 16523
120 Ga0307410_10011906 3300031852 Bacteria 5000
121 Ga0307410_10246331 3300031852 Bacteria 1387
122 Ga0307410_10375986 3300031852 Bacteria 1142
123 Ga0307406_10003475 3300031901 Bacteria 8569
124 Ga0307406_10036410 3300031901 Bacteria 3032
125 Ga0307407_10003260 3300031903 Bacteria 6607
126 Ga0307407_10024365 3300031903 Bacteria 3172
127 Ga0307412_10036215 3300031911 Bacteria 3159
128 Ga0307412_10076558 3300031911 Bacteria 2299
129 Ga0307412_10420593 3300031911 Bacteria 1093
130 Ga0307409_100000587 3300031995 Bacteria 15886
131 Ga0307409_100101703 3300031995 Bacteria 2385
132 Ga0307409_100184194 3300031995 Bacteria 1852
133 Ga0307409_100189191 3300031995 Bacteria 1830
134 Ga0307416_100000343 3300032002 Bacteria 24154
135 Ga0307416_100020950 3300032002 Bacteria 4680
136 Ga0307416_100075086 3300032002 Bacteria 2828
137 Ga0307414_10027009 3300032004 Bacteria 3703
138 Ga0307414_10027016 3300032004 Bacteria 3702
139 Ga0307414_10109245 3300032004 Bacteria 2100
140 Ga0307411_10053571 3300032005 Bacteria 2644
141 Ga0307411_10172804 3300032005 Bacteria 1631
142 Ga0307415_100000466 3300032126 Bacteria 17481
143 Ga0307415_100018538 3300032126 Bacteria 4205
144 Ga0307415_100033329 3300032126 Bacteria 3343
145 Ga0373952_0037639 3300035092 Bacteria 1105
146 Ga0316574_0001710 3300035398 Bacteria 10617
147 Ga0373937_0796520 3300036401 Bacteria 893
148 Ga0373937_0832425 3300036401 Bacteria 871
149 Ga0316582_0015712 3300036647 Unclassified 4340
150 Ga0316582_0038339 3300036647 Bacteria 2978
151 Ga0395900_0383466 3300037418 Bacteria 1373
152 Ga0395898_0397506 3300037466 Bacteria 1314
153 Ga0395901_0061934 3300038443 Bacteria 3893
154 Ga0439465_0036341 3300041413 Bacteria 1582
155 Ga0451791_0035922 3300041451 Bacteria 2480
156 Ga0451800_1422010 3300041459 Bacteria 1126
157 Ga0451837_0040552 3300041494 Bacteria 2300
158 Ga0451841_0832705 3300041498 Bacteria 1439
159 Ga0451853_0750303 3300041512 Bacteria 10687
160 Ga0439464_0039862 3300042439 Bacteria 1336
161 Ga0439460_0065158 3300042461 Bacteria 1119
162 Ga0451577_0711511 3300042876 Unclassified 909
163 Ga0466963_0077125 3300044694 Bacteria 2251
164 Ga0466963_0091483 3300044694 Bacteria 2072
165 Ga0453684_0003077 3300044712 Bacteria 38578
166 Ga0453684_0105517 3300044712 Bacteria 3436
167 Ga0453684_0123019 3300044712 Bacteria 3129
168 Ga0453684_0269920 3300044712 Bacteria 1944
169 Ga0466957_0058163 3300044842 Bacteria 2368
170 Ga0466957_0107919 3300044842 Bacteria 1763
171 Ga0466957_0262499 3300044842 Bacteria 1151
172 Ga0466959_0350819 3300045049 Bacteria 1006
173 Ga0466967_0060027 3300045976 Bacteria 3368
174 Ga0466967_0204997 3300045976 Bacteria 1869
175 Ga0466967_0296837 3300045976 Bacteria 1554
176 Ga0466967_0529984 3300045976 Bacteria 1158
177 Ga0495627_082966 3300046453 Bacteria 927
178 Ga0495592_0138255 3300046454 Bacteria 1697
179 Ga0495651_0140015 3300046462 Bacteria 1756
180 Ga0495653_0044940 3300046463 Bacteria 3426
181 Ga0495653_0052649 3300046463 Bacteria 3119
182 Ga0495620_0117620 3300046515 Bacteria 1050
183 Ga0495643_0226853 3300046522 Bacteria 883
184 Ga0495644_0130581 3300046523 Bacteria 957
185 Ga0495652_0451384 3300046529 Bacteria 900
186 Ga0495640_0229322 3300046533 Bacteria 1169
187 Ga0495598_0025051 3300046537 Bacteria 1624
188 Ga0495667_0267424 3300046559 Bacteria 1087
189 Ga0495656_0039425 3300046615 Bacteria 1962
190 Ga0495600_0309212 3300046809 Bacteria 996
191 Ga0495636_0111360 3300047318 Bacteria 1205
192 Ga0495684_0119151 3300047471 Bacteria 1989
193 Ga0495684_0135331 3300047471 Bacteria 1849
194 Ga0496100_0071234 3300048903 Bacteria 2320
195 Ga0496100_0203028 3300048903 Bacteria 1446
196 Ga0496102_0132905 3300048905 Bacteria 2330
197 Ga0496103_0028364 3300048906 Bacteria 3397
198 Ga0496103_0032951 3300048906 Bacteria 3164
199 Ga0496105_0138939 3300048908 Bacteria 2001
200 Ga0496106_0051197 3300048909 Bacteria 3114
201 Ga0496106_0232376 3300048909 Bacteria 1472
202 Ga0496107_0105844 3300048910 Bacteria 2065
203 Ga0496107_0321509 3300048910 Bacteria 1151
204 Ga0496109_0153475 3300048912 Bacteria 2157
205 Ga0496109_0170520 3300048912 Bacteria 2041
206 Ga0496110_0154387 3300048913 Bacteria 2079
207 Ga0496111_0146068 3300048914 Bacteria 1753
208 Ga0496112_0131799 3300048915 Bacteria 2471
209 Ga0496113_0037318 3300048916 Bacteria 3564
210 Ga0496113_0128263 3300048916 Bacteria 1988
211 Ga0496114_0036908 3300048917 Bacteria 4040
212 Ga0496117_0019238 3300048920 Bacteria 5616
213 Ga0496118_0086914 3300048921 Bacteria 2171
214 Ga0496119_0028098 3300048922 Bacteria 3848
215 Ga0496122_0001351 3300048925 Bacteria 39991
216 Ga0496122_0002266 3300048925 Bacteria 27825
217 Ga0496123_0001051 3300048926 Bacteria 41742
218 Ga0496124_0001248 3300048927 Bacteria 39039
219 Ga0496125_0051635 3300048928 Bacteria 3389
220 Ga0501032_0000178 3300049569 Bacteria 52170
221 Ga0501033_0007798 3300049570 Bacteria 8294
222 Ga0501034_0005265 3300049571 Bacteria 14195
223 Ga0501036_0000437 3300049572 Bacteria 29608
224 Ga0501037_0009944 3300049573 Bacteria 6975
225 Ga0501038_0015577 3300049574 Bacteria 6911
226 Ga0501039_0009070 3300049575 Bacteria 7582
227 Ga0501040_0201312 3300049576 Bacteria 1414
228 Ga0501042_0201106 3300049578 Bacteria 1437
229 Ga0501043_0012713 3300049579 Bacteria 6581
230 Ga0501046_0011251 3300049580 Bacteria 7659
231 Ga0501047_0003296 3300049581 Bacteria 15295
232 Ga0501048_0000586 3300049582 Bacteria 25837
233 Ga0501067_0005390 3300049583 Bacteria 7103
234 Ga0501067_0017474 3300049583 Bacteria 3967
235 Ga0501068_0050192 3300049584 Bacteria 2522
236 Ga0501069_0000512 3300049585 Bacteria 17722
237 Ga0501069_0212272 3300049585 Bacteria 1123
238 Ga0501070_0010558 3300049586 Bacteria 7806
239 Ga0501074_0003910 3300049590 Bacteria 10613
240 Ga0501076_0204248 3300049592 Bacteria 1614
241 Ga0501253_004369 3300049683 Bacteria 1780
242 Ga0501080_0001421 3300049742 Bacteria 20088
243 Ga0501083_0028154 3300049744 Bacteria 3875
244 Ga0501035_0016053 3300049822 Bacteria 6909
245 Ga0501044_0011046 3300049823 Bacteria 9796
246 nmdc:mga00v17_147746_c1 3300050491 Bacteria 1509
247 nmdc:mga0yw44_54258_c1 3300050492 Bacteria 2435
248 nmdc:mga05p37_111529_c1 3300050507 Bacteria 3364
249 nmdc:mga09592_130669_c1 3300050508 Bacteria 2160
250 nmdc:mga0qj67_18869_c1 3300050509 Bacteria 5261
251 nmdc:mga06r32_16542_c1 3300050510 Bacteria 6723
252 nmdc:mga06r32_286000_c1 3300050510 Bacteria 1635
253 nmdc:mga08y16_115487_c1 3300050511 Bacteria 2795
254 nmdc:mga08y16_743367_c1 3300050511 Bacteria 977
255 nmdc:mga0n895_108480_c1 3300050512 Bacteria 2791
256 nmdc:mga0n895_83476_c1 3300050512 Bacteria 3187
257 nmdc:mga0rr50_3842_c1 3300050513 Bacteria 8723
258 nmdc:mga0rr50_5916_c1 3300050513 Bacteria 7362
259 nmdc:mga08x19_26680_c1 3300050514 Bacteria 3605
260 nmdc:mga08x19_48406_c1 3300050514 Bacteria 2724
261 nmdc:mga0a205_3495_c1 3300050515 Bacteria 14033
262 nmdc:mga0a205_7449_c1 3300050515 Bacteria 9911
263 Ga0495601_0034611 3300053077 Bacteria 3152
264 Ga0495619_0047525 3300053085 Bacteria 2826
265 Ga0500646_0000104 3300053090 Bacteria 24217
266 Ga0500568_0000031 3300053139 Bacteria 153522
267 Ga0501084_0000248 3300054114 Bacteria 40872
268 2643848299 2643221566 Bacteria 3460379
269 2644083080 2643221613 Bacteria 4622396
270 2644137161 2643221624 Bacteria 4384879
271 2644666095 2643221721 Bacteria 4486924
272 2739602507 2739367653 Bacteria 2780952
273 2809227435 2808606447 Bacteria 3572005
274 2817508981 2816332305 Bacteria 2697803
275 2833710952 2833709550 Bacteria 4008291
276 2842891341 2842888712 Bacteria 4279094
277 2848552543 2848551377 Bacteria 3720646
278 2852634193 2852632344 Bacteria 3463163
279 2857728911 2857727296 Bacteria 2745552
280 2862383992 2862382967 Bacteria 10317375
281 2920882426 2920879853 Bacteria 4216831
282 2935891451 2935890801 Bacteria 4593001
283 8008562481 8008558824 Bacteria 10610750
284 Ga0081455_10037578
285 JGI25406J46586_10008773
286 JGI25405J52794_10013284
287 Ga0070683_100178608
288 Ga0068869_100108809
289 Ga0070682_100002589
290 Ga0070682_100334153
291 Ga0070691_10057757
292 Ga0070668_100018746
293 Ga0070668_100161743
294 Ga0070668_100390710
295 Ga0070674_100016540
296 Ga0070659_100156540
297 Ga0070714_100552102
298 Ga0070705_100019478
299 Ga0070700_100094072
300 Ga0070662_100006151
301 Ga0070662_100117556
302 Ga0070681_10166084
303 Ga0070685_10160528
304 Ga0070679_100725565
305 Ga0070684_100332791
306 Ga0070696_100051414
307 Ga0070693_100274083
308 Ga0068855_100420039
309 Ga0068854_100117006
310 Ga0068856_100767524
311 Ga0070702_100023495
312 Ga0070702_100368661
313 Ga0068866_10015645
314 Ga0068866_10050969
315 Ga0068861_100145570
316 Ga0068860_100623345
317 Ga0081455_10000740
318 Ga0081539_10000202
319 Ga0075365_10113882
320 Ga0075432_10000111
321 Ga0075432_10000199
322 Ga0075432_10005958
323 Ga0075428_100011910
324 Ga0075428_100176477
325 Ga0075428_100247736
326 Ga0075430_100022939
327 Ga0075431_100009214
328 Ga0075433_10000805
329 Ga0075433_10005329
330 Ga0075434_100000012
331 Ga0075434_100000586
332 Ga0075434_100300673
333 Ga0068865_100005471
334 Ga0068865_100093741
335 Ga0075436_100040090
336 Ga0075435_100001261
337 Ga0075435_100014648
338 Ga0111539_10001961
339 Ga0111539_10004582
340 Ga0105245_10072241
341 Ga0105245_10605505
342 Ga0114129_10055140
343 Ga0105243_10012899
344 Ga0105243_10436596
345 Ga0105242_10030242
346 Ga0105242_10117600
347 Ga0105248_10265515
348 Ga0105237_10111143
349 Ga0105238_10326583
350 Ga0105238_10377937
351 Ga0105249_10049540
352 Ga0105249_10479214
353 Ga0105249_10545636
354 Ga0105249_10714792
355 Ga0105239_10386591
356 Ga0105239_10765267
357 Ga0157369_10548034
358 Ga0157369_10894569
359 Ga0163162_10024281
360 Ga0163162_10039391
361 Ga0163162_10281997
362 Ga0163162_10381524
363 Ga0157372_10041043
364 Ga0157372_10289338
365 Ga0157372_10310010
366 Ga0157372_10680796
367 Ga0157372_10764519
368 Ga0157380_10030110
369 Ga0157380_10277554
370 Ga0157377_10006944
371 Ga0209758_1002138
372 Ga0207642_10040612
373 Ga0207688_10001148
374 Ga0207688_10185857
375 Ga0207660_10247105
376 Ga0207652_10334292
377 Ga0207687_10178790
378 Ga0207690_10181101
379 Ga0207706_10001585
380 Ga0207709_10150816
381 Ga0207709_10271691
382 Ga0207704_10103373
383 Ga0207704_10143958
384 Ga0207661_10157439
385 Ga0207661_10258942
386 Ga0207712_10031982
387 Ga0207712_10335413
388 Ga0207640_10109911
389 Ga0207675_100025615
390 Ga0207698_10351116
391 Ga0207428_10000607
392 Ga0207428_10000884
393 Ga0265334_10000596
394 Ga0307408_100013654
395 Ga0307408_100236390
396 Ga0307405_10002784
397 Ga0307405_10071792
398 Ga0307405_10150973
399 Ga0307413_10011093
400 Ga0307413_10034078
401 Ga0307413_10157536
402 Ga0307410_10000454
403 Ga0307410_10011906
404 Ga0307410_10246331
405 Ga0307410_10375986
406 Ga0307406_10003475
407 Ga0307406_10036410
408 Ga0307407_10003260
409 Ga0307407_10024365
410 Ga0307412_10036215
411 Ga0307412_10076558
412 Ga0307412_10420593
413 Ga0307409_100000587
414 Ga0307409_100101703
415 Ga0307409_100184194
416 Ga0307409_100189191
417 Ga0307416_100000343
418 Ga0307416_100020950
419 Ga0307416_100075086
420 Ga0307414_10027009
421 Ga0307414_10027016
422 Ga0307414_10109245
423 Ga0307411_10053571
424 Ga0307411_10172804
425 Ga0307415_100000466
426 Ga0307415_100018538
427 Ga0307415_100033329
428 Ga0373952_0037639
429 Ga0316574_0001710
430 Ga0373937_0796520
431 Ga0373937_0832425
432 Ga0316582_0015712
433 Ga0316582_0038339
434 Ga0395900_0383466
435 Ga0395898_0397506
436 Ga0395901_0061934
437 Ga0439465_0036341
438 Ga0451791_0035922
439 Ga0451800_1422010
440 Ga0451837_0040552
441 Ga0451841_0832705
442 Ga0451853_0750303
443 Ga0439464_0039862
444 Ga0439460_0065158
445 Ga0451577_0711511
446 Ga0466963_0077125
447 Ga0466963_0091483
448 Ga0453684_0003077
449 Ga0453684_0105517
450 Ga0453684_0123019
451 Ga0453684_0269920
452 Ga0466957_0058163
453 Ga0466957_0107919
454 Ga0466957_0262499
455 Ga0466959_0350819
456 Ga0466967_0060027
457 Ga0466967_0204997
458 Ga0466967_0296837
459 Ga0466967_0529984
460 Ga0495627_082966
461 Ga0495592_0138255
462 Ga0495651_0140015
463 Ga0495653_0044940
464 Ga0495653_0052649
465 Ga0495620_0117620
466 Ga0495643_0226853
467 Ga0495644_0130581
468 Ga0495652_0451384
469 Ga0495640_0229322
470 Ga0495598_0025051
471 Ga0495667_0267424
472 Ga0495656_0039425
473 Ga0495600_0309212
474 Ga0495636_0111360
475 Ga0495684_0119151
476 Ga0495684_0135331
477 Ga0496100_0071234
478 Ga0496100_0203028
479 Ga0496102_0132905
480 Ga0496103_0028364
481 Ga0496103_0032951
482 Ga0496105_0138939
483 Ga0496106_0051197
484 Ga0496106_0232376
485 Ga0496107_0105844
486 Ga0496107_0321509
487 Ga0496109_0153475
488 Ga0496109_0170520
489 Ga0496110_0154387
490 Ga0496111_0146068
491 Ga0496112_0131799
492 Ga0496113_0037318
493 Ga0496113_0128263
494 Ga0496114_0036908
495 Ga0496117_0019238
496 Ga0496118_0086914
497 Ga0496119_0028098
498 Ga0496122_0001351
499 Ga0496122_0002266
500 Ga0496123_0001051
501 Ga0496124_0001248
502 Ga0496125_0051635
503 Ga0501032_0000178
504 Ga0501033_0007798
505 Ga0501034_0005265
506 Ga0501036_0000437
507 Ga0501037_0009944
508 Ga0501038_0015577
509 Ga0501039_0009070
510 Ga0501040_0201312
511 Ga0501042_0201106
512 Ga0501043_0012713
513 Ga0501046_0011251
514 Ga0501047_0003296
515 Ga0501048_0000586
516 Ga0501067_0005390
517 Ga0501067_0017474
518 Ga0501068_0050192
519 Ga0501069_0000512
520 Ga0501069_0212272
521 Ga0501070_0010558
522 Ga0501074_0003910
523 Ga0501076_0204248
524 Ga0501253_004369
525 Ga0501080_0001421
526 Ga0501083_0028154
527 Ga0501035_0016053
528 Ga0501044_0011046
529 nmdc:mga00v17_147746_c1
530 nmdc:mga0yw44_54258_c1
531 nmdc:mga05p37_111529_c1
532 nmdc:mga09592_130669_c1
533 nmdc:mga0qj67_18869_c1
534 nmdc:mga06r32_16542_c1
535 nmdc:mga06r32_286000_c1
536 nmdc:mga08y16_115487_c1
537 nmdc:mga08y16_743367_c1
538 nmdc:mga0n895_108480_c1
539 nmdc:mga0n895_83476_c1
540 nmdc:mga0rr50_3842_c1
541 nmdc:mga0rr50_5916_c1
542 nmdc:mga08x19_26680_c1
543 nmdc:mga08x19_48406_c1
544 nmdc:mga0a205_3495_c1
545 nmdc:mga0a205_7449_c1
546 Ga0495601_0034611
547 Ga0495619_0047525
548 Ga0500646_0000104
549 Ga0500568_0000031
550 Ga0501084_0000248
551 2643848299
552 2644083080
553 2644137161
554 2644666095
555 2739602507
556 2809227435
557 2817508981
558 2833710952
559 2842891341
560 2848552543
561 2852634193
562 2857728911
563 2862383992
564 2920882426
565 2935891451
566 8008562481

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00480

ROK

ROK family

29

197

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
1woq-assembly2.cif.gz_B crystal structure of inorganic polyphosphate/atp-glucomannokinase from arthrobacter sp. strain km at 1.8 a resolution 0.956 9 253
1woq-assembly2.cif.gz_B crystal structure of inorganic polyphosphate/atp-glucomannokinase from arthrobacter sp. strain km at 1.8 a resolution 0.9232 9 253
5f7r-assembly1.cif.gz_A rok repressor lmo0178 from listeria monocytogenes bound to inducer 0.8621 10 256
5nck-assembly1.cif.gz_B the crystal structure of n-acetylmannosamine kinase in fusobacterium nucleatum 0.8571 10 260
3lm2-assembly1.cif.gz_B crystal structure of putative kinase. (17743352) from agrobacterium tumefaciens str. c58 (dupont) at 1.70 a resolution 0.8535 9 255
ID Description Score Start End Superfamily
1woqA02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9633 116 258 3.30.420.40
1woqB01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9623 9 115 3.30.420.40
1woqA02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9567 116 258 3.30.420.40
af_P9WIN1_10_122_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9403 1 115 3.30.420.40
af_P9WIN1_10_122_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9323 1 115 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A7V9ITG3-F1-model_v4 ROK family protein 0.9952 114 255
AF-A0A1G6GF77-F1-model_v4 Polyphosphate glucokinase 0.9947 6 258 GO:0016301
AF-A0A350WP05-F1-model_v4 Polyphosphate glucokinase 0.9923 114 254 GO:0016301
AF-W4TYV3-F1-model_v4 deleted 0.9902 114 260
AF-A0A383AN51-F1-model_v4 ROK family protein 0.9892 103 252

Map