F385082

General Info

Members Datasets Scaffolds Average Seq Length
282 199 281 286

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0980911|Ga0436364_0980911_889_1965
Length 317
Sequence MPASRPYWKGYLKLSLVSCPIALYTASASSERVSFRQINKKTGNRLRQQLVDDVTREPVETADKGRGYEVAKNTYMLVEDEELDAVAIESTQTIEIDNFVPRAQIDERYFDSPYYIVPNDQVGQEAFAVIREAMRDKEMAALGRVVLSKRERVIMLQPWDRGLVGTTLRYAYELRDTHEYFDEIPELKVPKDMLELAEHIVASKTADFDPTKFVDRYEEAVVEMLKTKQAGMAVPKPREIQAPNVINLMDALRRSLAGAGGAAPRVTAAKTPAAAVPKPEDLRAAPQFKFPIAGGKSKAKEEPATEVAKPKSRRKSA

Samples

Sample ID Description Type Environment
1 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
42 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
52 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
53 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
54 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
56 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
57 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
58 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
60 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
61 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
89 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
90 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
92 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
93 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
94 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
95 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
96 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
97 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
98 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
99 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
100 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
106 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
107 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
108 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
109 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
110 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
111 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
112 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
113 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
120 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
121 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
122 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
123 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
124 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
125 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
126 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
127 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
128 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
129 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
130 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
133 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
134 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
135 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
136 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
140 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
153 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
154 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
155 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
158 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
170 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
171 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
172 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
173 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
174 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
175 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
176 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
177 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
178 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
179 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
180 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
182 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
183 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
184 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
185 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
186 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
187 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
188 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
189 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
190 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
191 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
192 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
193 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
194 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
195 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
196 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
197 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
198 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
199 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.23
Metatranscriptomes 1.42
Isolates 0.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.99
Nodule 0.35
Rhizoplane 10.28
Rhizosphere 68.79
Stem 0
Stem Tuber 0
Unclassified 9.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000355 3300002773 Bacteria 28544
2 JGI25150J39212_1000247 3300002774 Bacteria 28544
3 JGI25151J46595_10000687 3300003187 Bacteria 28544
4 JGI25153J46596_10000086 3300003215 Bacteria 111778
5 JGI25153J46596_10014318 3300003215 Bacteria 3304
6 Ga0055530_10027031 3300003791 Bacteria 1573
7 Ga0055531_10005548 3300003794 Bacteria 7362
8 Ga0070676_10073898 3300005328 Bacteria 2052
9 Ga0070683_100283848 3300005329 Bacteria 1575
10 Ga0070670_100004393 3300005331 Bacteria 11803
11 Ga0070670_100522593 3300005331 Bacteria 1057
12 Ga0070660_100323098 3300005339 Bacteria 1268
13 Ga0070689_100049744 3300005340 Bacteria 3237
14 Ga0070669_100218946 3300005353 Bacteria 1505
15 Ga0070675_100073135 3300005354 Bacteria 2846
16 Ga0070675_100214952 3300005354 Bacteria 1673
17 Ga0070671_100479628 3300005355 Bacteria 1068
18 Ga0070674_100041601 3300005356 Bacteria 3116
19 Ga0070673_100571385 3300005364 Bacteria 1029
20 Ga0070688_100032282 3300005365 Bacteria 3156
21 Ga0070713_100176321 3300005436 Bacteria 1918
22 Ga0070710_10074172 3300005437 Bacteria 1969
23 Ga0070711_100075982 3300005439 Bacteria 2380
24 Ga0070708_100737643 3300005445 Bacteria 926
25 Ga0070678_100022710 3300005456 Bacteria 4164
26 Ga0070662_100103532 3300005457 Bacteria 2159
27 Ga0070679_100221649 3300005530 Bacteria 1852
28 Ga0070686_100339339 3300005544 Bacteria 1125
29 Ga0068864_100024799 3300005618 Bacteria 5045
30 Ga0068866_10070832 3300005718 Bacteria 1842
31 Ga0068870_10220366 3300005840 Bacteria 1161
32 Ga0068862_100092768 3300005844 Bacteria 2632
33 Ga0081455_10029245 3300005937 Bacteria 5026
34 Ga0081455_10038273 3300005937 Bacteria 4248
35 Ga0081455_10063638 3300005937 Bacteria 3094
36 Ga0075365_10021348 3300006038 Bacteria 4038
37 Ga0075364_10162069 3300006051 Bacteria 1510
38 Ga0075362_10010092 3300006177 Bacteria 3676
39 Ga0075367_10004871 3300006178 Bacteria 6609
40 Ga0075428_100288398 3300006844 Bacteria 1766
41 Ga0075430_100264021 3300006846 Bacteria 1425
42 Ga0075431_100152440 3300006847 Bacteria 2379
43 Ga0075433_10460785 3300006852 Bacteria 1120
44 Ga0075434_100061278 3300006871 Bacteria 3743
45 Ga0099794_10015170 3300007265 Bacteria 3394
46 Ga0099795_10017052 3300007788 Bacteria 2310
47 Ga0111539_10431647 3300009094 Bacteria 1534
48 Ga0105245_10485208 3300009098 Bacteria 1250
49 Ga0105242_10131474 3300009176 Bacteria 2161
50 Ga0105249_10069096 3300009553 Bacteria 3260
51 Ga0163162_10453479 3300013306 Bacteria 1414
52 Ga0157372_10284848 3300013307 Bacteria 1922
53 Ga0157372_10616040 3300013307 Bacteria 1265
54 Ga0157375_10299589 3300013308 Bacteria 1771
55 Ga0157375_10492177 3300013308 Bacteria 1391
56 Ga0163163_10013706 3300014325 Bacteria 7428
57 Ga0163163_10024526 3300014325 Bacteria 5740
58 Ga0163163_10264748 3300014325 Unclassified 1770
59 Ga0182008_10051491 3300014497 Bacteria 2042
60 Ga0182007_10042849 3300015262 Unclassified 1505
61 Ga0182005_1061123 3300015265 Bacteria 1029
62 Ga0206350_10123372 3300020080 Bacteria 967
63 Ga0213872_10020563 3300021361 Bacteria 3043
64 Ga0213876_10002485 3300021384 Bacteria 10823
65 Ga0213876_10005072 3300021384 Bacteria 7260
66 Ga0213876_10039005 3300021384 Bacteria 2509
67 Ga0213876_10129412 3300021384 Bacteria 1341
68 Ga0213875_10001044 3300021388 Bacteria 19504
69 Ga0213875_10007806 3300021388 Bacteria 5498
70 Ga0224712_10102270 3300022467 Bacteria 1217
71 Ga0207425_1000101 3300025245 Bacteria 80528
72 Ga0209129_1000196 3300025258 Bacteria 80528
73 Ga0209025_1000450 3300025294 Bacteria 80528
74 Ga0209758_1000005 3300025297 Bacteria 1368918
75 Ga0209758_1001145 3300025297 Bacteria 34025
76 Ga0209050_1003733 3300025298 Bacteria 10951
77 Ga0207426_1013282 3300025302 Bacteria 3057
78 Ga0209257_1000391 3300025304 Bacteria 87258
79 Ga0207642_10058050 3300025899 Bacteria 1784
80 Ga0207645_10024459 3300025907 Bacteria 3915
81 Ga0207643_10048229 3300025908 Bacteria 2412
82 Ga0207707_10206866 3300025912 Bacteria 1710
83 Ga0207707_10240133 3300025912 Bacteria 1575
84 Ga0207657_10224155 3300025919 Bacteria 1505
85 Ga0207649_10123196 3300025920 Bacteria 1751
86 Ga0207652_10188278 3300025921 Bacteria 1856
87 Ga0207681_10118578 3300025923 Bacteria 1937
88 Ga0207650_10026292 3300025925 Bacteria 4150
89 Ga0207659_10063235 3300025926 Bacteria 2674
90 Ga0207706_10113520 3300025933 Bacteria 2383
91 Ga0207709_10079576 3300025935 Bacteria 2108
92 Ga0207709_10120519 3300025935 Bacteria 1770
93 Ga0207691_10034882 3300025940 Bacteria 4674
94 Ga0207711_10366623 3300025941 Bacteria 1335
95 Ga0207668_10069551 3300025972 Bacteria 2507
96 Ga0207708_10331028 3300026075 Bacteria 1245
97 Ga0207648_10125275 3300026089 Bacteria 2260
98 Ga0207675_100112047 3300026118 Bacteria 2575
99 Ga0207683_10008156 3300026121 Bacteria 8960
100 Ga0207683_10013014 3300026121 Bacteria 7102
101 Ga0209179_1014852 3300027512 Bacteria 1437
102 Ga0209588_1038157 3300027671 Bacteria 1547
103 Ga0268265_10081785 3300028380 Bacteria 2551
104 Ga0265318_10006712 3300028577 Bacteria 5272
105 Ga0307517_10080032 3300028786 Bacteria 2803
106 Ga0265760_10015068 3300031090 Unclassified 2215
107 Ga0265760_10044150 3300031090 Bacteria 1333
108 Ga0265330_10017973 3300031235 Bacteria 3250
109 Ga0265332_10021527 3300031238 Bacteria 2848
110 Ga0265328_10049798 3300031239 Bacteria 1538
111 Ga0265320_10001441 3300031240 Bacteria 17327
112 Ga0265325_10009836 3300031241 Bacteria 5566
113 Ga0265325_10069364 3300031241 Bacteria 1773
114 Ga0265329_10007204 3300031242 Bacteria 4325
115 Ga0265340_10000234 3300031247 Bacteria 28538
116 Ga0265340_10099815 3300031247 Unclassified 1350
117 Ga0265339_10017155 3300031249 Bacteria 4293
118 Ga0265339_10022552 3300031249 Bacteria 3648
119 Ga0265331_10003021 3300031250 Bacteria 11038
120 Ga0265316_10082438 3300031344 Bacteria 2464
121 Ga0307513_10246134 3300031456 Bacteria 1588
122 Ga0265313_10004081 3300031595 Bacteria 11376
123 Ga0265313_10004163 3300031595 Bacteria 11238
124 Ga0265314_10024411 3300031711 Bacteria 4585
125 Ga0265342_10002015 3300031712 Bacteria 18077
126 Ga0307516_10126327 3300031730 Bacteria 2342
127 Ga0373936_0064917 3300035113 Bacteria 1497
128 Ga0373939_0058950 3300035114 Bacteria 1216
129 Ga0373941_0008439 3300035115 Bacteria 2558
130 Ga0373960_0006367 3300035121 Bacteria 2768
131 Ga0373943_0068584 3300035170 Bacteria 1791
132 Ga0373962_0041393 3300035242 Bacteria 1299
133 Ga0373931_0004679 3300035691 Bacteria 6265
134 Ga0373931_0010343 3300035691 Bacteria 4483
135 Ga0373931_0085354 3300035691 Bacteria 1750
136 Ga0373935_0025220 3300035692 Bacteria 3664
137 Ga0373927_0212679 3300035695 Bacteria 1270
138 Ga0373927_0221863 3300035695 Bacteria 1242
139 Ga0373947_0017715 3300035725 Bacteria 4098
140 Ga0373937_0005053 3300036401 Bacteria 11234
141 Ga0373937_0246438 3300036401 Bacteria 1684
142 Ga0373925_0014079 3300037068 Bacteria 5788
143 Ga0373925_0207746 3300037068 Bacteria 1559
144 Ga0395900_0065253 3300037418 Unclassified 3740
145 Ga0395898_0244836 3300037466 Bacteria 1710
146 Ga0436364_0709664 3300037853 Bacteria 2903
147 Ga0436364_0980911 3300037853 Unclassified 2564
148 Ga0436364_1349433 3300037853 Bacteria 7465
149 Ga0436364_1471614 3300037853 Bacteria 11053
150 Ga0436364_1514196 3300037853 Unclassified 2794
151 Ga0395901_0296470 3300038443 Bacteria 1677
152 Ga0436365_0015820 3300039437 Bacteria 43599
153 Ga0436365_0209699 3300039437 Bacteria 4327
154 Ga0436365_0341049 3300039437 Unclassified 1319
155 Ga0436365_0999482 3300039437 Bacteria 1058
156 Ga0436365_1236287 3300039437 Bacteria 49251
157 Ga0436361_1056469 3300039447 Bacteria 7655
158 Ga0436363_0383032 3300039450 Bacteria 14219
159 Ga0436363_1130352 3300039450 Bacteria 2111
160 Ga0436363_1325734 3300039450 Bacteria 20984
161 Ga0436362_0607096 3300039453 Bacteria 9350
162 Ga0466966_0068609 3300044684 Bacteria 2226
163 Ga0466961_0060186 3300044693 Bacteria 2415
164 Ga0495592_0029573 3300046454 Bacteria 4148
165 Ga0495618_0040718 3300046514 Bacteria 2925
166 Ga0495628_0042511 3300046516 Bacteria 3625
167 Ga0495630_0157674 3300046517 Bacteria 1728
168 Ga0495630_0224381 3300046517 Bacteria 1435
169 Ga0495652_0102499 3300046529 Bacteria 2319
170 Ga0495640_0054038 3300046533 Bacteria 2753
171 Ga0495634_0045839 3300046642 Bacteria 2953
172 Ga0495599_0013935 3300046678 Bacteria 4976
173 Ga0495604_0098693 3300047317 Bacteria 2151
174 Ga0495674_0053722 3300047319 Bacteria 3540
175 Ga0495684_0150670 3300047471 Bacteria 1739
176 Ga0495602_0211395 3300048088 Bacteria 1472
177 Ga0496100_0138753 3300048903 Bacteria 1720
178 Ga0496104_0004234 3300048907 Bacteria 12458
179 Ga0496104_0068060 3300048907 Unclassified 3383
180 Ga0496104_0082823 3300048907 Bacteria 3059
181 Ga0496105_0001518 3300048908 Bacteria 16412
182 Ga0496105_0133500 3300048908 Unclassified 2045
183 Ga0496106_0016237 3300048909 Bacteria 5508
184 Ga0496107_0146717 3300048910 Unclassified 1745
185 Ga0496108_0003063 3300048911 Bacteria 13435
186 Ga0496108_0033673 3300048911 Bacteria 4256
187 Ga0496108_0100005 3300048911 Bacteria 2473
188 Ga0496108_0145413 3300048911 Bacteria 2044
189 Ga0496109_0026031 3300048912 Bacteria 5214
190 Ga0496109_0405217 3300048912 Bacteria 1288
191 Ga0496110_0303411 3300048913 Bacteria 1454
192 Ga0496110_0427415 3300048913 Bacteria 1207
193 Ga0496111_0000509 3300048914 Bacteria 20095
194 Ga0496111_0031443 3300048914 Bacteria 3781
195 Ga0496112_0035189 3300048915 Plasmid 4876
196 Ga0496113_0001812 3300048916 Bacteria 12136
197 Ga0496113_0045175 3300048916 Unclassified 3266
198 Ga0496113_0186089 3300048916 Bacteria 1647
199 Ga0496114_0114878 3300048917 Bacteria 2309
200 Ga0496114_0318005 3300048917 Unclassified 1375
201 Ga0496115_0003644 3300048918 Bacteria 11085
202 Ga0496115_0023110 3300048918 Bacteria 4823
203 Ga0496115_0041743 3300048918 Bacteria 3652
204 Ga0496115_0228808 3300048918 Bacteria 1534
205 Ga0496115_0312285 3300048918 Unclassified 1287
206 Ga0496116_0001751 3300048919 Bacteria 23646
207 Ga0496122_0003829 3300048925 Bacteria 19337
208 Ga0496123_0003241 3300048926 Bacteria 18519
209 Ga0496124_0003793 3300048927 Bacteria 18154
210 Ga0496126_0041977 3300048929 Bacteria 4229
211 Ga0501031_0067696 3300049568 Bacteria 2326
212 Ga0501032_0001871 3300049569 Bacteria 16630
213 Ga0501033_0026740 3300049570 Bacteria 4341
214 Ga0501033_0127377 3300049570 Bacteria 1846
215 Ga0501033_0150274 3300049570 Bacteria 1681
216 Ga0501034_0078051 3300049571 Bacteria 3316
217 Ga0501036_0006808 3300049572 Bacteria 9284
218 Ga0501036_0194606 3300049572 Bacteria 1706
219 Ga0501038_0001352 3300049574 Bacteria 22335
220 Ga0501038_0157164 3300049574 Bacteria 1850
221 Ga0501039_0012525 3300049575 Bacteria 6478
222 Ga0501043_0001070 3300049579 Bacteria 24067
223 Ga0501043_0103583 3300049579 Bacteria 2236
224 Ga0501046_0001902 3300049580 Bacteria 19831
225 Ga0501047_0007606 3300049581 Bacteria 10197
226 Ga0501047_0149867 3300049581 Bacteria 2209
227 Ga0501047_0174890 3300049581 Bacteria 2015
228 Ga0501048_0004676 3300049582 Bacteria 10423
229 Ga0501067_0001134 3300049583 Bacteria 14419
230 Ga0501068_0023459 3300049584 Bacteria 3616
231 Ga0501069_0002301 3300049585 Bacteria 9641
232 Ga0501069_0073677 3300049585 Bacteria 1915
233 Ga0501070_0014925 3300049586 Bacteria 6534
234 Ga0501070_0205344 3300049586 Bacteria 1618
235 Ga0501070_0251714 3300049586 Bacteria 1445
236 Ga0501071_0285854 3300049587 Bacteria 1248
237 Ga0501072_0076825 3300049588 Bacteria 2643
238 Ga0501073_0008659 3300049589 Bacteria 7538
239 Ga0501073_0022978 3300049589 Bacteria 4484
240 Ga0501073_0095435 3300049589 Bacteria 2065
241 Ga0501074_0014812 3300049590 Bacteria 5672
242 Ga0501079_0046568 3300049741 Bacteria 3346
243 Ga0501080_0001465 3300049742 Bacteria 19867
244 Ga0501080_0010454 3300049742 Bacteria 8496
245 Ga0501080_0077149 3300049742 Bacteria 3098
246 Ga0501080_0162213 3300049742 Bacteria 2064
247 Ga0501083_0000898 3300049744 Bacteria 19730
248 Ga0501083_0085514 3300049744 Bacteria 2086
249 Ga0501083_0089003 3300049744 Bacteria 2040
250 Ga0501083_0108710 3300049744 Bacteria 1824
251 Ga0501035_0036906 3300049822 Bacteria 4427
252 Ga0501044_0002579 3300049823 Bacteria 20621
253 Ga0501044_0008098 3300049823 Bacteria 11536
254 Ga0501044_0029344 3300049823 Bacteria 5800
255 Ga0501044_0042575 3300049823 Bacteria 4722
256 Ga0501044_0116428 3300049823 Bacteria 2678
257 nmdc:mga0yw44_47177_c1 3300050492 Bacteria 2591
258 nmdc:mga0qj67_125469_c1 3300050509 Bacteria 2077
259 nmdc:mga0n895_510003_c1 3300050512 Bacteria 1211
260 Ga0495601_0004626 3300053077 Bacteria 7962
261 Ga0495601_0021930 3300053077 Bacteria 3917
262 Ga0495601_0081005 3300053077 Bacteria 2083
263 Ga0495612_0073092 3300053078 Bacteria 1432
264 Ga0495612_0087451 3300053078 Unclassified 1315
265 Ga0495655_0022333 3300053083 Bacteria 1444
266 Ga0495619_0017538 3300053085 Bacteria 4535
267 Ga0495619_0088973 3300053085 Bacteria 2089
268 Ga0500578_0180730 3300053086 Unclassified 1300
269 Ga0500651_0012864 3300053093 Bacteria 5082
270 Ga0500566_0047538 3300053094 Bacteria 2463
271 Ga0500641_0000426 3300053096 Bacteria 15484
272 Ga0500562_004836 3300053108 Bacteria 3394
273 Ga0500595_001890 3300053119 Bacteria 10792
274 Ga0500588_0000727 3300053146 Bacteria 5622
275 Ga0500588_0066788 3300053146 Bacteria 1168
276 Ga0500616_0000512 3300053153 Bacteria 49134
277 Ga0500616_0008474 3300053153 Bacteria 6380
278 Ga0500609_000438 3300053731 Bacteria 6179
279 Ga0501084_0085739 3300054114 Bacteria 2644
280 Ga0501084_0248583 3300054114 Bacteria 1502
281 Ga0501082_0006631 3300060353 Bacteria 10016

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005937 Ga0081455_10029245 Ga0081455_100292454 207
2 3300005937 Ga0081455_10038273 Ga0081455_100382734 207
3 3300006051 Ga0075364_10162069 Ga0075364_101620691 207
4 3300006177 Ga0075362_10010092 Ga0075362_100100924 207
5 3300006847 Ga0075431_100152440 Ga0075431_1001524402 207
6 3300050492 nmdc:mga0yw44_47177_c1 nmdc:mga0yw44_47177_c1_644_1567 207
7 3300009094 Ga0111539_10431647 Ga0111539_104316472 218
8 3300013307 Ga0157372_10284848 Ga0157372_102848483 224
9 3300025912 Ga0207707_10206866 Ga0207707_102068662 224
10 3300037853 Ga0436364_1349433 Ga0436364_1349433_5323_6201 225
11 3300035695 Ga0373927_0221863 Ga0373927_0221863_183_1013 226
12 3300039437 Ga0436365_0015820 Ga0436365_0015820_23651_24529 226
13 3300039437 Ga0436365_0999482 Ga0436365_0999482_113_1033 226
14 3300039453 Ga0436362_0607096 Ga0436362_0607096_4994_5872 226
15 3300046514 Ga0495618_0040718 Ga0495618_0040718_1643_2473 226
16 3300046517 Ga0495630_0224381 Ga0495630_0224381_33_863 226
17 3300046533 Ga0495640_0054038 Ga0495640_0054038_933_1763 226
18 3300046642 Ga0495634_0045839 Ga0495634_0045839_377_1207 226
19 3300047319 Ga0495674_0053722 Ga0495674_0053722_221_1051 226
20 3300047471 Ga0495684_0150670 Ga0495684_0150670_86_916 226
21 3300053077 Ga0495601_0004626 Ga0495601_0004626_3837_4667 226
22 3300053078 Ga0495612_0087451 Ga0495612_0087451_182_1012 226
23 3300053085 Ga0495619_0017538 Ga0495619_0017538_2182_3012 226
24 3300039437 Ga0436365_0209699 Ga0436365_0209699_3174_4037 231
25 3300049570 Ga0501033_0150274 Ga0501033_0150274_598_1401 233
26 3300049588 Ga0501072_0076825 Ga0501072_0076825_1564_2358 234
27 3300049587 Ga0501071_0285854 Ga0501071_0285854_405_1229 237
28 3300044684 Ga0466966_0068609 Ga0466966_0068609_955_1935 242
29 3300044693 Ga0466961_0060186 Ga0466961_0060186_1390_2370 242
30 3300053731 Ga0500609_000438 Ga0500609_000438_469_1284 242
31 3300049579 Ga0501043_0103583 Ga0501043_0103583_352_1332 244
32 3300049586 Ga0501070_0205344 Ga0501070_0205344_43_1023 244
33 3300049823 Ga0501044_0042575 Ga0501044_0042575_2475_3455 244
34 3300005937 Ga0081455_10063638 Ga0081455_100636382 247
35 3300049568 Ga0501031_0067696 Ga0501031_0067696_764_1621 248
36 3300006844 Ga0075428_100288398 Ga0075428_1002883981 249
37 3300006846 Ga0075430_100264021 Ga0075430_1002640211 249
38 3300006852 Ga0075433_10460785 Ga0075433_104607851 249
39 3300006871 Ga0075434_100061278 Ga0075434_1000612789 249
40 3300050512 nmdc:mga0n895_510003_c1 nmdc:mga0n895_510003_c1_92_973 249
41 3300005840 Ga0068870_10220366 Ga0068870_102203662 250
42 3300025908 Ga0207643_10048229 Ga0207643_100482292 250
43 3300013307 Ga0157372_10616040 Ga0157372_106160402 252
44 3300005354 Ga0070675_100073135 Ga0070675_1000731352 253
45 3300005356 Ga0070674_100041601 Ga0070674_1000416014 253
46 3300009176 Ga0105242_10131474 Ga0105242_101314742 253
47 3300013308 Ga0157375_10299589 Ga0157375_102995891 253
48 3300015262 Ga0182007_10042849 Ga0182007_100428491 253
49 3300025935 Ga0207709_10079576 Ga0207709_100795762 253
50 3300025940 Ga0207691_10034882 Ga0207691_100348823 253
51 3300026121 Ga0207683_10013014 Ga0207683_100130145 253
52 3300035691 Ga0373931_0085354 Ga0373931_0085354_351_1253 253
53 3300035692 Ga0373935_0025220 Ga0373935_0025220_294_1238 253
54 3300035725 Ga0373947_0017715 Ga0373947_0017715_3114_4058 253
55 3300037068 Ga0373925_0014079 Ga0373925_0014079_1488_2432 253
56 3300049581 Ga0501047_0174890 Ga0501047_0174890_103_1011 253
57 iso_pu_bacteria 2513237141 2513892245 253
58 3300015265 Ga0182005_1061123 Ga0182005_10611231 254
59 3300031090 Ga0265760_10015068 Ga0265760_100150682 254
60 3300049586 Ga0501070_0251714 Ga0501070_0251714_113_979 254
61 3300049742 Ga0501080_0077149 Ga0501080_0077149_2154_3020 254
62 3300049744 Ga0501083_0089003 Ga0501083_0089003_186_1052 254
63 3300053094 Ga0500566_0047538 Ga0500566_0047538_717_1586 254
64 3300053119 Ga0500595_001890 Ga0500595_001890_2515_3384 254
65 3300003215 JGI25153J46596_10000086 JGI25153J46596_1000008682 255
66 3300003791 Ga0055530_10027031 Ga0055530_100270312 255
67 3300003794 Ga0055531_10005548 Ga0055531_100055486 255
68 3300025297 Ga0209758_1000005 Ga0209758_1000005854 255
69 3300025298 Ga0209050_1003733 Ga0209050_10037335 255
70 3300025304 Ga0209257_1000391 Ga0209257_100039123 255
71 3300025912 Ga0207707_10240133 Ga0207707_102401332 255
72 3300028786 Ga0307517_10080032 Ga0307517_100800322 255
73 3300049570 Ga0501033_0127377 Ga0501033_0127377_880_1737 255
74 3300049572 Ga0501036_0194606 Ga0501036_0194606_580_1437 255
75 3300049574 Ga0501038_0157164 Ga0501038_0157164_105_962 255
76 3300049581 Ga0501047_0007606 Ga0501047_0007606_7423_8280 255
77 3300049585 Ga0501069_0073677 Ga0501069_0073677_674_1531 255
78 3300049589 Ga0501073_0008659 Ga0501073_0008659_1627_2484 255
79 3300049589 Ga0501073_0095435 Ga0501073_0095435_836_1693 255
80 3300049742 Ga0501080_0162213 Ga0501080_0162213_573_1535 255
81 3300049744 Ga0501083_0085514 Ga0501083_0085514_858_1820 255
82 3300049823 Ga0501044_0029344 Ga0501044_0029344_3580_4437 255
83 3300053086 Ga0500578_0180730 Ga0500578_0180730_73_942 255
84 3300053093 Ga0500651_0012864 Ga0500651_0012864_2628_3485 255
85 3300053146 Ga0500588_0000727 Ga0500588_0000727_4181_5038 255
86 3300053146 Ga0500588_0066788 Ga0500588_0066788_25_882 255
87 3300054114 Ga0501084_0085739 Ga0501084_0085739_330_1187 255
88 3300054114 Ga0501084_0248583 Ga0501084_0248583_70_987 255
89 3300005530 Ga0070679_100221649 Ga0070679_1002216492 256
90 3300006178 Ga0075367_10004871 Ga0075367_100048712 256
91 3300014325 Ga0163163_10013706 Ga0163163_100137062 256
92 3300020080 Ga0206350_10123372 Ga0206350_101233722 256
93 3300021388 Ga0213875_10001044 Ga0213875_100010441 256
94 3300022467 Ga0224712_10102270 Ga0224712_101022702 256
95 3300025302 Ga0207426_1013282 Ga0207426_10132822 256
96 3300025921 Ga0207652_10188278 Ga0207652_101882782 256
97 3300026075 Ga0207708_10331028 Ga0207708_103310281 256
98 3300031456 Ga0307513_10246134 Ga0307513_102461341 256
99 3300031730 Ga0307516_10126327 Ga0307516_101263272 256
100 3300037068 Ga0373925_0207746 Ga0373925_0207746_114_1073 256
101 3300037418 Ga0395900_0065253 Ga0395900_0065253_642_1502 256
102 3300037466 Ga0395898_0244836 Ga0395898_0244836_640_1500 256
103 3300037853 Ga0436364_0980911 Ga0436364_0980911_889_1965 256
104 3300038443 Ga0395901_0296470 Ga0395901_0296470_338_1201 256
105 3300048088 Ga0495602_0211395 Ga0495602_0211395_553_1380 256
106 3300048907 Ga0496104_0004234 Ga0496104_0004234_3119_4078 256
107 3300048908 Ga0496105_0001518 Ga0496105_0001518_6532_7491 256
108 3300048911 Ga0496108_0003063 Ga0496108_0003063_4715_5674 256
109 3300048914 Ga0496111_0000509 Ga0496111_0000509_8793_9752 256
110 3300048916 Ga0496113_0001812 Ga0496113_0001812_3394_4353 256
111 3300048917 Ga0496114_0114878 Ga0496114_0114878_1146_2105 256
112 3300048918 Ga0496115_0023110 Ga0496115_0023110_3301_4260 256
113 3300049569 Ga0501032_0001871 Ga0501032_0001871_7927_8808 256
114 3300049571 Ga0501034_0078051 Ga0501034_0078051_468_1349 256
115 3300049572 Ga0501036_0006808 Ga0501036_0006808_7809_8690 256
116 3300049574 Ga0501038_0001352 Ga0501038_0001352_16721_17602 256
117 3300049575 Ga0501039_0012525 Ga0501039_0012525_1502_2383 256
118 3300049579 Ga0501043_0001070 Ga0501043_0001070_10122_11003 256
119 3300049580 Ga0501046_0001902 Ga0501046_0001902_14781_15662 256
120 3300049582 Ga0501048_0004676 Ga0501048_0004676_2061_2942 256
121 3300049583 Ga0501067_0001134 Ga0501067_0001134_3829_4710 256
122 3300049584 Ga0501068_0023459 Ga0501068_0023459_1708_2589 256
123 3300049585 Ga0501069_0002301 Ga0501069_0002301_2365_3246 256
124 3300049586 Ga0501070_0014925 Ga0501070_0014925_324_1205 256
125 3300049589 Ga0501073_0022978 Ga0501073_0022978_3280_4161 256
126 3300049590 Ga0501074_0014812 Ga0501074_0014812_730_1611 256
127 3300049741 Ga0501079_0046568 Ga0501079_0046568_2010_2891 256
128 3300049742 Ga0501080_0001465 Ga0501080_0001465_11059_11940 256
129 3300049744 Ga0501083_0000898 Ga0501083_0000898_3941_4822 256
130 3300049822 Ga0501035_0036906 Ga0501035_0036906_686_1567 256
131 3300049823 Ga0501044_0002579 Ga0501044_0002579_17645_18526 256
132 3300053153 Ga0500616_0000512 Ga0500616_0000512_10941_11810 256
133 3300060353 Ga0501082_0006631 Ga0501082_0006631_2096_2977 256
134 3300005328 Ga0070676_10073898 Ga0070676_100738982 257
135 3300005329 Ga0070683_100283848 Ga0070683_1002838482 257
136 3300005331 Ga0070670_100522593 Ga0070670_1005225931 257
137 3300005339 Ga0070660_100323098 Ga0070660_1003230981 257
138 3300005340 Ga0070689_100049744 Ga0070689_1000497444 257
139 3300005353 Ga0070669_100218946 Ga0070669_1002189461 257
140 3300005354 Ga0070675_100214952 Ga0070675_1002149521 257
141 3300005355 Ga0070671_100479628 Ga0070671_1004796281 257
142 3300005364 Ga0070673_100571385 Ga0070673_1005713851 257
143 3300005365 Ga0070688_100032282 Ga0070688_1000322825 257
144 3300005436 Ga0070713_100176321 Ga0070713_1001763211 257
145 3300005439 Ga0070711_100075982 Ga0070711_1000759821 257
146 3300005445 Ga0070708_100737643 Ga0070708_1007376431 257
147 3300005456 Ga0070678_100022710 Ga0070678_1000227105 257
148 3300005457 Ga0070662_100103532 Ga0070662_1001035322 257
149 3300005544 Ga0070686_100339339 Ga0070686_1003393391 257
150 3300005618 Ga0068864_100024799 Ga0068864_1000247996 257
151 3300005718 Ga0068866_10070832 Ga0068866_100708322 257
152 3300005844 Ga0068862_100092768 Ga0068862_1000927682 257
153 3300006038 Ga0075365_10021348 Ga0075365_100213487 257
154 3300007265 Ga0099794_10015170 Ga0099794_100151703 257
155 3300009098 Ga0105245_10485208 Ga0105245_104852081 257
156 3300009553 Ga0105249_10069096 Ga0105249_100690962 257
157 3300013306 Ga0163162_10453479 Ga0163162_104534792 257
158 3300013308 Ga0157375_10492177 Ga0157375_104921772 257
159 3300014325 Ga0163163_10024526 Ga0163163_100245263 257
160 3300021384 Ga0213876_10002485 Ga0213876_100024856 257
161 3300021384 Ga0213876_10005072 Ga0213876_100050725 257
162 3300021384 Ga0213876_10039005 Ga0213876_100390052 257
163 3300025899 Ga0207642_10058050 Ga0207642_100580502 257
164 3300025907 Ga0207645_10024459 Ga0207645_100244593 257
165 3300025919 Ga0207657_10224155 Ga0207657_102241551 257
166 3300025920 Ga0207649_10123196 Ga0207649_101231961 257
167 3300025923 Ga0207681_10118578 Ga0207681_101185782 257
168 3300025926 Ga0207659_10063235 Ga0207659_100632353 257
169 3300025933 Ga0207706_10113520 Ga0207706_101135203 257
170 3300025935 Ga0207709_10120519 Ga0207709_101205192 257
171 3300025941 Ga0207711_10366623 Ga0207711_103666232 257
172 3300025972 Ga0207668_10069551 Ga0207668_100695512 257
173 3300026089 Ga0207648_10125275 Ga0207648_101252752 257
174 3300026118 Ga0207675_100112047 Ga0207675_1001120473 257
175 3300026121 Ga0207683_10008156 Ga0207683_100081565 257
176 3300027512 Ga0209179_1014852 Ga0209179_10148521 257
177 3300027671 Ga0209588_1038157 Ga0209588_10381572 257
178 3300028380 Ga0268265_10081785 Ga0268265_100817852 257
179 3300028577 Ga0265318_10006712 Ga0265318_100067127 257
180 3300031235 Ga0265330_10017973 Ga0265330_100179734 257
181 3300031238 Ga0265332_10021527 Ga0265332_100215276 257
182 3300031239 Ga0265328_10049798 Ga0265328_100497981 257
183 3300031240 Ga0265320_10001441 Ga0265320_100014418 257
184 3300031241 Ga0265325_10009836 Ga0265325_100098362 257
185 3300031242 Ga0265329_10007204 Ga0265329_100072042 257
186 3300031247 Ga0265340_10000234 Ga0265340_100002346 257
187 3300031249 Ga0265339_10017155 Ga0265339_100171554 257
188 3300031249 Ga0265339_10022552 Ga0265339_100225523 257
189 3300031250 Ga0265331_10003021 Ga0265331_1000302111 257
190 3300031344 Ga0265316_10082438 Ga0265316_100824381 257
191 3300031595 Ga0265313_10004081 Ga0265313_100040819 257
192 3300031711 Ga0265314_10024411 Ga0265314_100244111 257
193 3300031712 Ga0265342_10002015 Ga0265342_100020154 257
194 3300035113 Ga0373936_0064917 Ga0373936_0064917_515_1456 257
195 3300035114 Ga0373939_0058950 Ga0373939_0058950_259_1200 257
196 3300035115 Ga0373941_0008439 Ga0373941_0008439_938_1879 257
197 3300035121 Ga0373960_0006367 Ga0373960_0006367_281_1222 257
198 3300035170 Ga0373943_0068584 Ga0373943_0068584_510_1451 257
199 3300035242 Ga0373962_0041393 Ga0373962_0041393_155_1096 257
200 3300035691 Ga0373931_0004679 Ga0373931_0004679_2890_3831 257
201 3300035691 Ga0373931_0010343 Ga0373931_0010343_1176_2117 257
202 3300035695 Ga0373927_0212679 Ga0373927_0212679_315_1256 257
203 3300036401 Ga0373937_0246438 Ga0373937_0246438_334_1275 257
204 3300037853 Ga0436364_1514196 Ga0436364_1514196_195_1154 257
205 3300039437 Ga0436365_0341049 Ga0436365_0341049_176_1120 257
206 3300039437 Ga0436365_1236287 Ga0436365_1236287_37271_38215 257
207 3300039450 Ga0436363_0383032 Ga0436363_0383032_6056_7000 257
208 3300039450 Ga0436363_1325734 Ga0436363_1325734_11869_12828 257
209 3300046516 Ga0495628_0042511 Ga0495628_0042511_368_1309 257
210 3300046517 Ga0495630_0157674 Ga0495630_0157674_515_1456 257
211 3300046529 Ga0495652_0102499 Ga0495652_0102499_1257_2198 257
212 3300047317 Ga0495604_0098693 Ga0495604_0098693_304_1245 257
213 3300048903 Ga0496100_0138753 Ga0496100_0138753_82_1023 257
214 3300048907 Ga0496104_0082823 Ga0496104_0082823_1500_2441 257
215 3300048909 Ga0496106_0016237 Ga0496106_0016237_4552_5493 257
216 3300048911 Ga0496108_0145413 Ga0496108_0145413_145_1086 257
217 3300048912 Ga0496109_0405217 Ga0496109_0405217_81_1022 257
218 3300048913 Ga0496110_0303411 Ga0496110_0303411_70_1029 257
219 3300048916 Ga0496113_0186089 Ga0496113_0186089_411_1352 257
220 3300048918 Ga0496115_0041743 Ga0496115_0041743_1748_2689 257
221 3300048918 Ga0496115_0228808 Ga0496115_0228808_157_1104 257
222 3300049570 Ga0501033_0026740 Ga0501033_0026740_3339_4319 257
223 3300049581 Ga0501047_0149867 Ga0501047_0149867_875_1852 257
224 3300049742 Ga0501080_0010454 Ga0501080_0010454_6833_7810 257
225 3300049744 Ga0501083_0108710 Ga0501083_0108710_472_1446 257
226 3300049823 Ga0501044_0008098 Ga0501044_0008098_9806_10783 257
227 3300049823 Ga0501044_0116428 Ga0501044_0116428_1258_2238 257
228 3300050509 nmdc:mga0qj67_125469_c1 nmdc:mga0qj67_125469_c1_499_1389 257
229 3300053077 Ga0495601_0081005 Ga0495601_0081005_625_1566 257
230 3300053078 Ga0495612_0073092 Ga0495612_0073092_396_1319 257
231 3300053083 Ga0495655_0022333 Ga0495655_0022333_40_921 257
232 3300053096 Ga0500641_0000426 Ga0500641_0000426_10131_11000 257
233 3300053108 Ga0500562_004836 Ga0500562_004836_1603_2445 257
234 3300002773 JGI25152J39213_1000355 JGI25152J39213_100035519 258
235 3300002774 JGI25150J39212_1000247 JGI25150J39212_100024716 258
236 3300003187 JGI25151J46595_10000687 JGI25151J46595_1000068716 258
237 3300003215 JGI25153J46596_10014318 JGI25153J46596_100143181 258
238 3300005331 Ga0070670_100004393 Ga0070670_1000043934 258
239 3300005437 Ga0070710_10074172 Ga0070710_100741721 258
240 3300007788 Ga0099795_10017052 Ga0099795_100170521 258
241 3300014325 Ga0163163_10264748 Ga0163163_102647483 258
242 3300014497 Ga0182008_10051491 Ga0182008_100514911 258
243 3300021361 Ga0213872_10020563 Ga0213872_100205633 258
244 3300021384 Ga0213876_10129412 Ga0213876_101294121 258
245 3300021388 Ga0213875_10007806 Ga0213875_100078065 258
246 3300025245 Ga0207425_1000101 Ga0207425_100010120 258
247 3300025258 Ga0209129_1000196 Ga0209129_100019620 258
248 3300025294 Ga0209025_1000450 Ga0209025_100045020 258
249 3300025297 Ga0209758_1001145 Ga0209758_100114517 258
250 3300025925 Ga0207650_10026292 Ga0207650_100262922 258
251 3300031090 Ga0265760_10044150 Ga0265760_100441502 258
252 3300031241 Ga0265325_10069364 Ga0265325_100693641 258
253 3300031247 Ga0265340_10099815 Ga0265340_100998151 258
254 3300031595 Ga0265313_10004163 Ga0265313_100041637 258
255 3300036401 Ga0373937_0005053 Ga0373937_0005053_4748_5674 258
256 3300037853 Ga0436364_0709664 Ga0436364_0709664_1326_2285 258
257 3300037853 Ga0436364_1471614 Ga0436364_1471614_7520_8476 258
258 3300039447 Ga0436361_1056469 Ga0436361_1056469_5391_6371 258
259 3300039450 Ga0436363_1130352 Ga0436363_1130352_819_1811 258
260 3300046454 Ga0495592_0029573 Ga0495592_0029573_2465_3391 258
261 3300046678 Ga0495599_0013935 Ga0495599_0013935_520_1446 258
262 3300048907 Ga0496104_0068060 Ga0496104_0068060_1144_2094 258
263 3300048908 Ga0496105_0133500 Ga0496105_0133500_319_1269 258
264 3300048910 Ga0496107_0146717 Ga0496107_0146717_677_1684 258
265 3300048911 Ga0496108_0033673 Ga0496108_0033673_235_1185 258
266 3300048911 Ga0496108_0100005 Ga0496108_0100005_1218_2090 258
267 3300048912 Ga0496109_0026031 Ga0496109_0026031_2474_3424 258
268 3300048913 Ga0496110_0427415 Ga0496110_0427415_110_1060 258
269 3300048914 Ga0496111_0031443 Ga0496111_0031443_151_1101 258
270 3300048915 Ga0496112_0035189 Ga0496112_0035189_1946_2896 258
271 3300048916 Ga0496113_0045175 Ga0496113_0045175_2101_3051 258
272 3300048917 Ga0496114_0318005 Ga0496114_0318005_192_1142 258
273 3300048918 Ga0496115_0003644 Ga0496115_0003644_517_1443 258
274 3300048918 Ga0496115_0312285 Ga0496115_0312285_123_1073 258
275 3300048919 Ga0496116_0001751 Ga0496116_0001751_17866_18687 258
276 3300048925 Ga0496122_0003829 Ga0496122_0003829_6495_7316 258
277 3300048926 Ga0496123_0003241 Ga0496123_0003241_1815_2636 258
278 3300048927 Ga0496124_0003793 Ga0496124_0003793_5319_6140 258
279 3300048929 Ga0496126_0041977 Ga0496126_0041977_457_1467 258
280 3300053077 Ga0495601_0021930 Ga0495601_0021930_2451_3377 258
281 3300053085 Ga0495619_0088973 Ga0495619_0088973_122_1132 258
282 3300053153 Ga0500616_0008474 Ga0500616_0008474_2675_3502 258

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02735

Ku

Ku70/Ku80 beta-barrel domain

13

196

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1jeq-assembly1.cif.gz_A crystal structure of the ku heterodimer 0.7193 5 221
8asc-assembly1.cif.gz_A ku70/80 binds to the ku-binding motif of paxx 0.716 5 218
8asc-assembly1.cif.gz_E ku70/80 binds to the ku-binding motif of paxx 0.7089 5 218
5kxf-assembly1.cif.gz_A crystal structure of the spoc domain of the arabidopsis flowering regulator fpa 0.6922 8 176
7nfc-assembly1.cif.gz_G cryo-em structure of nhej super-complex (dimer) 0.6918 5 225
ID Description Score Start End Superfamily
af_D3ZVK0_237_416_2.40.290.10 Mainly Beta;Beta Barrel;Ku70; Chain: A; Domain 2; 0.8494 93 176 2.40.290.10
af_Q8TC57_257_413_2.40.290.10 Mainly Beta;Beta Barrel;Ku70; Chain: A; Domain 2; 0.8427 94 176 2.40.290.10
af_P9WKD9_3_185_2.40.290.10 Mainly Beta;Beta Barrel;Ku70; Chain: A; Domain 2; 0.8011 7 176 2.40.290.10
af_A0A1D6ETJ1_1_68_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.7659 139 171 2.40.50.140
af_P9WKD9_3_185_2.40.290.10 Mainly Beta;Beta Barrel;Ku70; Chain: A; Domain 2; 0.7457 7 176 2.40.290.10
ID Description Score Start End GO Terms
AF-A0A659XXU8-F1-model_v4 Ku protein 0.9541 106 181 GO:0003690
GO:0006303
AF-A0A659XXU8-F1-model_v4 Ku protein 0.9423 106 181 GO:0003690
GO:0006303
AF-A0A529Z1S8-F1-model_v4 Ku protein 0.889 1 229 GO:0003690
GO:0006303
AF-A0A536VMD1-F1-model_v4 Ku protein 0.8858 93 208 GO:0003690
GO:0006303
AF-A0A523AQN9-F1-model_v4 Ku protein 0.8835 5 230 GO:0003690
GO:0006303

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pLDDT pTM Quality
82.55 0.7 High
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Predicted Structure (AlphaFold2)

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