F384933

General Info

Members Datasets Scaffolds Average Seq Length
282 183 249 139

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10245841|Ga0157375_102458411
Length 157
Sequence MDRTEPADRPEGLTMTDLDPRLLEVVRERNLGSLATIKRDGRPQLSNVNFAFEADKALLRASVTDDRAKVRNLRRDPRASVLVSSADGWSYTVLEGDVTFSEVAASPDDAAVEELIEVYRLVAGEHPDWDDYRRAMVHDRRLVLRLQVTHAYGMAPG

Samples

Sample ID Description Type Environment
1 2501939600 Micromonospora sp. L5 Isolate Unclassified
2 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
3 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
4 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
5 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
6 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
7 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
8 2855683550 Micromonospora sp. RP3T Isolate Unclassified
9 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
10 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
11 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
12 2858868258 Micromonospora sp. MH33 Isolate Unclassified
13 2858882152 Micromonospora noduli MED15 Isolate Nodule
14 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
15 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
16 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
17 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
18 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
19 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
20 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
21 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
22 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
23 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
24 2902582711 Micromonospora sp. AP08 Isolate Unclassified
25 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
26 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
27 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
28 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
29 3300003308 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
30 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
31 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
33 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
34 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
35 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
36 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
37 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
38 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
39 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
40 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
41 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
42 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
43 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
44 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
45 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
46 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
47 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
48 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
49 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
50 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
51 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
52 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
56 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
57 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
58 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
59 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
62 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
63 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
64 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
65 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
71 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
79 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
97 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
98 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
101 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
102 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
107 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
108 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
109 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
110 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
111 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
112 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
113 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
114 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
115 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
116 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
117 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
118 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
121 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
122 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
125 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
126 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
133 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
137 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
153 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
154 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
155 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
156 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
157 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
158 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
159 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
160 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
169 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
172 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
173 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
176 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
177 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
178 649633069 Micromonospora sp. L5 Isolate Unclassified
179 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
180 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
181 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
182 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
183 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.82
Metatranscriptomes 2.48
Isolates 11.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.71
Nodule 1.77
Rhizoplane 3.9
Rhizosphere 84.75
Stem 0
Stem Tuber 0
Unclassified 8.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006778J45830_1012765 3300003162 Bacteria 1238
2 Ga0006777J48905_1009494 3300003308 Bacteria 832
3 Ga0007429J51699_1008853 3300003579 Bacteria 1300
4 JGI25405J52794_10068012 3300003911 Unclassified 775
5 Ga0058859_10066441 3300004798 Bacteria 6283
6 Ga0070683_100555496 3300005329 Bacteria 1098
7 Ga0070682_101083314 3300005337 Bacteria 670
8 Ga0070660_100227076 3300005339 Bacteria 1518
9 Ga0070668_100869749 3300005347 Unclassified 804
10 Ga0070714_100000006 3300005435 Bacteria 293311
11 Ga0070708_100037829 3300005445 Unclassified 4212
12 Ga0070708_100051777 3300005445 Plasmid 3638
13 Ga0070708_100079289 3300005445 Bacteria 2970
14 Ga0070708_100674525 3300005445 Unclassified 973
15 Ga0070663_100343874 3300005455 Bacteria 1206
16 Ga0070662_101617138 3300005457 Unclassified 559
17 Ga0070681_10365085 3300005458 Bacteria 1354
18 Ga0070706_100037013 3300005467 Unclassified 4508
19 Ga0070706_100092138 3300005467 Bacteria 2811
20 Ga0070707_100398712 3300005468 Bacteria 1336
21 Ga0070707_100398925 3300005468 Bacteria 1335
22 Ga0070698_100111682 3300005471 Plasmid 2698
23 Ga0070698_100438365 3300005471 Bacteria 1241
24 Ga0070698_100503029 3300005471 Bacteria 1150
25 Ga0070698_100675370 3300005471 Unclassified 974
26 Ga0070699_100130231 3300005518 Bacteria 2218
27 Ga0070699_101192165 3300005518 Unclassified 698
28 Ga0070679_100523086 3300005530 Bacteria 1130
29 Ga0070684_100861763 3300005535 Bacteria 848
30 Ga0070697_100130734 3300005536 Unclassified 2105
31 Ga0070696_101192499 3300005546 Unclassified 643
32 Ga0068855_101799790 3300005563 Bacteria 622
33 Ga0068859_100234414 3300005617 Bacteria 1924
34 Ga0068861_101936884 3300005719 Bacteria 587
35 Ga0068861_102589906 3300005719 Bacteria 511
36 Ga0068858_100111015 3300005842 Bacteria 2561
37 Ga0068862_102092268 3300005844 Unclassified 577
38 Ga0081455_10003000 3300005937 Bacteria 19690
39 Ga0081455_10009731 3300005937 Bacteria 9854
40 Ga0081455_10227112 3300005937 Bacteria 1380
41 Ga0081538_10094413 3300005981 Bacteria 1532
42 Ga0081538_10249345 3300005981 Bacteria 678
43 Ga0081540_1027628 3300005983 Bacteria 3209
44 Ga0081540_1209453 3300005983 Unclassified 702
45 Ga0081539_10003391 3300005985 Bacteria 19688
46 Ga0081539_10046958 3300005985 Unclassified 2471
47 Ga0075427_10003871 3300006194 Unclassified 2088
48 Ga0075428_100018918 3300006844 Bacteria 7617
49 Ga0075428_100036582 3300006844 Bacteria 5406
50 Ga0075428_100049780 3300006844 Bacteria 4597
51 Ga0075428_100181283 3300006844 Unclassified 2279
52 Ga0075428_100191397 3300006844 Unclassified 2212
53 Ga0075428_100311026 3300006844 Bacteria 1693
54 Ga0075428_100512772 3300006844 Bacteria 1283
55 Ga0075428_100912627 3300006844 Unclassified 931
56 Ga0075430_100082228 3300006846 Unclassified 2699
57 Ga0075430_100329181 3300006846 Bacteria 1262
58 Ga0075430_100716697 3300006846 Unclassified 825
59 Ga0075431_100041810 3300006847 Bacteria 4727
60 Ga0075431_100053058 3300006847 Bacteria 4180
61 Ga0075431_100166001 3300006847 Bacteria 2269
62 Ga0075431_100797101 3300006847 Bacteria 918
63 Ga0075433_10176096 3300006852 Bacteria 1904
64 Ga0075433_10363802 3300006852 Bacteria 1278
65 Ga0075433_11767971 3300006852 Unclassified 532
66 Ga0075434_101110832 3300006871 Unclassified 804
67 Ga0075429_100012464 3300006880 Bacteria 7376
68 Ga0075429_100091123 3300006880 Unclassified 2659
69 Ga0075429_100548942 3300006880 Unclassified 1013
70 Ga0075429_100553054 3300006880 Bacteria 1008
71 Ga0097620_100234401 3300006931 Bacteria 1924
72 Ga0099794_10036532 3300007265 Bacteria 2323
73 Ga0105240_10129910 3300009093 Bacteria 3023
74 Ga0105240_10563664 3300009093 Bacteria 1259
75 Ga0111539_10334051 3300009094 Bacteria 1764
76 Ga0111539_10723685 3300009094 Unclassified 1158
77 Ga0105245_10147606 3300009098 Bacteria 2220
78 Ga0114129_10009525 3300009147 Bacteria 13854
79 Ga0114129_10077356 3300009147 Bacteria 4628
80 Ga0114129_10121714 3300009147 Unclassified 3591
81 Ga0114129_11789722 3300009147 Unclassified 747
82 Ga0105238_10653672 3300009551 Bacteria 1061
83 Ga0105249_10189329 3300009553 Bacteria 2007
84 Ga0105249_10435560 3300009553 Bacteria 1347
85 Ga0105249_11272025 3300009553 Bacteria 807
86 Ga0157369_10564579 3300013105 Bacteria 1176
87 Ga0163162_10002922 3300013306 Bacteria 16292
88 Ga0157375_10245841 3300013308 Bacteria 1949
89 Ga0157375_10537039 3300013308 Bacteria 1332
90 Ga0157379_10047365 3300014968 Bacteria 3835
91 Ga0206350_11498727 3300020080 Bacteria 582
92 Ga0206353_10230365 3300020082 Bacteria 2543
93 Ga0206353_10270566 3300020082 Bacteria 2503
94 Ga0207684_10013159 3300025910 Bacteria 7160
95 Ga0207695_10091209 3300025913 Bacteria 3061
96 Ga0207695_10227141 3300025913 Bacteria 1772
97 Ga0207657_10272389 3300025919 Bacteria 1345
98 Ga0207657_10372449 3300025919 Bacteria 1125
99 Ga0207652_10386497 3300025921 Bacteria 1263
100 Ga0207652_11059917 3300025921 Bacteria 710
101 Ga0207646_10341404 3300025922 Bacteria 1353
102 Ga0207646_10371664 3300025922 Bacteria 1292
103 Ga0207694_10379052 3300025924 Bacteria 1174
104 Ga0207694_11843768 3300025924 Bacteria 508
105 Ga0207664_10000032 3300025929 Bacteria 179232
106 Ga0207670_10234037 3300025936 Bacteria 1412
107 Ga0207665_11264916 3300025939 Unclassified 588
108 Ga0207661_11502750 3300025944 Bacteria 617
109 Ga0207667_11070728 3300025949 Bacteria 791
110 Ga0207677_10315077 3300026023 Bacteria 1298
111 Ga0207703_10159405 3300026035 Bacteria 1975
112 Ga0207678_10657165 3300026067 Bacteria 921
113 Ga0207678_10709752 3300026067 Bacteria 885
114 Ga0207678_11020003 3300026067 Bacteria 732
115 Ga0207674_10019144 3300026116 Bacteria 7422
116 Ga0207675_101976361 3300026118 Bacteria 601
117 Ga0207428_10325337 3300027907 Bacteria 1135
118 Ga0307410_11033167 3300031852 Bacteria 710
119 Ga0307410_11054909 3300031852 Bacteria 703
120 Ga0307409_100011641 3300031995 Bacteria 5560
121 Ga0307416_101333310 3300032002 Viruses 823
122 Ga0307416_101653814 3300032002 Unclassified 745
123 Ga0373943_0584913 3300035170 Bacteria 657
124 Ga0373942_0246212 3300035207 Bacteria 606
125 Ga0373931_0318651 3300035691 Bacteria 965
126 Ga0373933_0693354 3300035724 Bacteria 670
127 Ga0373937_1729458 3300036401 Bacteria 572
128 Ga0395901_0591599 3300038443 Bacteria 1120
129 Ga0436361_0954731 3300039447 Bacteria 1100
130 Ga0436363_1518780 3300039450 Bacteria 1206
131 Ga0451793_0831805 3300041452 Bacteria 676
132 Ga0451847_0456512 3300041503 Bacteria 550
133 Ga0451853_1507682 3300041512 Bacteria 566
134 Ga0451853_3988433 3300041512 Bacteria 930
135 Ga0439448_0191791 3300042005 Unclassified 715
136 Ga0439460_0007767 3300042461 Bacteria 2692
137 Ga0439460_0058094 3300042461 Bacteria 1175
138 Ga0439440_0024116 3300042993 Bacteria 1393
139 Ga0466966_0115250 3300044684 Bacteria 1654
140 Ga0466961_0076791 3300044693 Bacteria 2116
141 Ga0466971_0012030 3300044719 Bacteria 3792
142 Ga0466960_0013370 3300044901 Bacteria 3486
143 Ga0466959_0197302 3300045049 Bacteria 1402
144 Ga0466967_0002711 3300045976 Bacteria 11193
145 Ga0495603_0466295 3300046455 Bacteria 723
146 Ga0495629_0168884 3300046459 Bacteria 1519
147 Ga0495662_0493727 3300046476 Unclassified 600
148 Ga0495645_0244216 3300046543 Bacteria 1196
149 Ga0495667_0329550 3300046559 Bacteria 966
150 Ga0495668_0000604 3300046616 Bacteria 43491
151 Ga0495625_0000792 3300046660 Bacteria 43853
152 Ga0495635_1101399 3300046663 Bacteria 503
153 Ga0495680_0044596 3300047322 Bacteria 3506
154 Ga0495675_0309862 3300047444 Bacteria 936
155 Ga0495684_0166627 3300047471 Bacteria 1641
156 Ga0495684_0249232 3300047471 Bacteria 1293
157 Ga0495602_0267532 3300048088 Bacteria 1265
158 Ga0495626_0000952 3300048091 Bacteria 25154
159 Ga0496101_0186498 3300048904 Bacteria 1599
160 Ga0496102_0592604 3300048905 Bacteria 1031
161 Ga0496105_1199318 3300048908 Bacteria 559
162 Ga0496106_0037245 3300048909 Bacteria 3639
163 Ga0496106_0165594 3300048909 Bacteria 1750
164 Ga0496106_0369343 3300048909 Bacteria 1153
165 Ga0496107_1297633 3300048910 Bacteria 521
166 Ga0496109_0825036 3300048912 Bacteria 865
167 Ga0496110_0451097 3300048913 Bacteria 1172
168 Ga0496115_0330856 3300048918 Bacteria 1245
169 Ga0501031_0578802 3300049568 Bacteria 723
170 Ga0501033_0399139 3300049570 Unclassified 959
171 Ga0501033_0631473 3300049570 Bacteria 733
172 Ga0501036_0047838 3300049572 Bacteria 3621
173 Ga0501036_0754278 3300049572 Bacteria 803
174 Ga0501038_0127394 3300049574 Bacteria 2094
175 Ga0501038_0167498 3300049574 Bacteria 1781
176 Ga0501039_0011588 3300049575 Bacteria 6714
177 Ga0501039_0229333 3300049575 Bacteria 1460
178 Ga0501039_0329638 3300049575 Bacteria 1200
179 Ga0501040_0197030 3300049576 Bacteria 1430
180 Ga0501040_0354976 3300049576 Bacteria 1050
181 Ga0501040_0666850 3300049576 Unclassified 752
182 Ga0501040_0907249 3300049576 Bacteria 638
183 Ga0501041_0277578 3300049577 Bacteria 1054
184 Ga0501041_0318246 3300049577 Unclassified 981
185 Ga0501042_0218943 3300049578 Bacteria 1373
186 Ga0501042_0475145 3300049578 Unclassified 907
187 Ga0501042_0790921 3300049578 Bacteria 690
188 Ga0501043_0697736 3300049579 Bacteria 742
189 Ga0501043_0721493 3300049579 Unclassified 727
190 Ga0501046_0359640 3300049580 Bacteria 1056
191 Ga0501048_0090278 3300049582 Bacteria 2161
192 Ga0501048_0123216 3300049582 Bacteria 1832
193 Ga0501068_0476442 3300049584 Unclassified 809
194 Ga0501068_0582769 3300049584 Unclassified 728
195 Ga0501068_1032164 3300049584 Bacteria 543
196 Ga0501069_0008811 3300049585 Bacteria 5315
197 Ga0501069_0404768 3300049585 Bacteria 808
198 Ga0501070_0002641 3300049586 Bacteria 15647
199 Ga0501070_0007735 3300049586 Bacteria 9110
200 Ga0501071_0098217 3300049587 Bacteria 2157
201 Ga0501071_1085416 3300049587 Bacteria 618
202 Ga0501072_0027916 3300049588 Bacteria 4405
203 Ga0501073_0061419 3300049589 Bacteria 2622
204 Ga0501075_0492092 3300049591 Bacteria 936
205 Ga0501075_1516115 3300049591 Unclassified 507
206 Ga0501076_0184186 3300049592 Bacteria 1703
207 Ga0501077_0085765 3300049593 Bacteria 1996
208 Ga0501079_0556375 3300049741 Bacteria 902
209 Ga0501079_1518716 3300049741 Unclassified 527
210 Ga0501080_0007845 3300049742 Bacteria 9657
211 Ga0501080_0563519 3300049742 Bacteria 1014
212 Ga0501080_1102919 3300049742 Unclassified 685
213 Ga0501081_0123358 3300049743 Bacteria 1847
214 Ga0501081_0390916 3300049743 Bacteria 1029
215 Ga0501081_0454987 3300049743 Bacteria 951
216 Ga0501035_0505007 3300049822 Unclassified 995
217 Ga0501035_0631779 3300049822 Bacteria 870
218 Ga0501045_0531202 3300049824 Bacteria 873
219 Ga0501045_1079774 3300049824 Unclassified 587
220 nmdc:mga05p37_1286621_c1 3300050507 Unclassified 747
221 nmdc:mga05p37_14321_c1 3300050507 Bacteria 9522
222 nmdc:mga05p37_349658_c1 3300050507 Unclassified 1741
223 nmdc:mga05p37_878837_c1 3300050507 Unclassified 970
224 nmdc:mga05p37_949957_c1 3300050507 Bacteria 920
225 nmdc:mga09592_21175_c1 3300050508 Bacteria 5357
226 nmdc:mga09592_24910_c1 3300050508 Bacteria 4949
227 nmdc:mga09592_96137_c1 3300050508 Bacteria 2534
228 nmdc:mga0qj67_176123_c1 3300050509 Unclassified 1737
229 nmdc:mga0qj67_459929_c1 3300050509 Bacteria 1024
230 nmdc:mga0qj67_795382_c1 3300050509 Unclassified 749
231 nmdc:mga06r32_1473023_c1 3300050510 Bacteria 621
232 nmdc:mga06r32_238387_c1 3300050510 Bacteria 1807
233 nmdc:mga06r32_274679_c1 3300050510 Unclassified 1673
234 nmdc:mga08y16_176309_c1 3300050511 Bacteria 2220
235 nmdc:mga08y16_290342_c1 3300050511 Bacteria 1686
236 nmdc:mga0a205_60216_c1 3300050515 Bacteria 3667
237 nmdc:mga0a205_633761_c1 3300050515 Unclassified 921
238 nmdc:mga0a205_685453_c1 3300050515 Unclassified 875
239 Ga0500568_0027080 3300053139 Bacteria 2400
240 Ga0500616_0000794 3300053153 Bacteria 36195
241 Ga0501084_0035717 3300054114 Bacteria 4155
242 Ga0501084_0080395 3300054114 Bacteria 2733
243 Ga0501082_0029238 3300060353 Bacteria 4746
244 Ga0501082_0171434 3300060353 Bacteria 1887
245 Ga0501082_0399329 3300060353 Bacteria 1200
246 Ga0466962_0199152 3300061719 Bacteria 978
247 Ga0530510_0015538 3300061734 Bacteria 5380
248 Ga0530510_0158108 3300061734 Unclassified 1676
249 Ga0530510_0379841 3300061734 Bacteria 1063

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049587 Ga0501071_1085416 Ga0501071_1085416_219_572 115
2 3300049822 Ga0501035_0631779 Ga0501035_0631779_491_844 115
3 iso_pu_bacteria 2775506925 2776377113 129
4 iso_pu_bacteria 2863067949 2863069749 129
5 3300046455 Ga0495603_0466295 Ga0495603_0466295_120_533 130
6 3300045976 Ga0466967_0002711 Ga0466967_0002711_7918_8319 131
7 3300049568 Ga0501031_0578802 Ga0501031_0578802_154_558 132
8 3300049572 Ga0501036_0047838 Ga0501036_0047838_2753_3157 132
9 3300049574 Ga0501038_0127394 Ga0501038_0127394_1409_1813 132
10 3300049575 Ga0501039_0229333 Ga0501039_0229333_993_1397 132
11 3300049577 Ga0501041_0277578 Ga0501041_0277578_173_577 132
12 3300049579 Ga0501043_0697736 Ga0501043_0697736_228_632 132
13 3300049580 Ga0501046_0359640 Ga0501046_0359640_194_598 132
14 3300049582 Ga0501048_0090278 Ga0501048_0090278_1110_1514 132
15 3300049584 Ga0501068_1032164 Ga0501068_1032164_23_427 132
16 3300049741 Ga0501079_0556375 Ga0501079_0556375_65_469 132
17 3300049743 Ga0501081_0123358 Ga0501081_0123358_1395_1799 132
18 3300054114 Ga0501084_0035717 Ga0501084_0035717_1399_1803 132
19 3300061734 Ga0530510_0379841 Ga0530510_0379841_429_833 132
20 iso_pu_bacteria 2501939600 2501942701 132
21 iso_pu_bacteria 2622736626 2623586530 132
22 iso_pu_bacteria 2856858025 2856860451 132
23 iso_pu_bacteria 2858868258 2858870595 132
24 iso_pu_bacteria 2867302475 2867303909 132
25 iso_pu_bacteria 2902582711 2902586287 132
26 iso_pu_bacteria 2929219909 2929220660 132
27 iso_pu_bacteria 2996221748 2996227257 132
28 iso_pu_bacteria 649633069 649811190 132
29 iso_pu_bacteria 8001781756 8001786693 132
30 3300031995 Ga0307409_100011641 Ga0307409_1000116416 133
31 3300049572 Ga0501036_0754278 Ga0501036_0754278_272_679 133
32 3300049576 Ga0501040_0907249 Ga0501040_0907249_81_488 133
33 3300049591 Ga0501075_0492092 Ga0501075_0492092_449_856 133
34 3300049743 Ga0501081_0454987 Ga0501081_0454987_393_800 133
35 3300049824 Ga0501045_0531202 Ga0501045_0531202_225_632 133
36 3300060353 Ga0501082_0171434 Ga0501082_0171434_314_721 133
37 iso_pu_bacteria 2880489317 2880493665 133
38 iso_pu_bacteria 8054704163 8054708175 133
39 3300003911 JGI25405J52794_10068012 JGI25405J52794_100680121 134
40 3300004798 Ga0058859_10066441 Ga0058859_100664413 134
41 3300005347 Ga0070668_100869749 Ga0070668_1008697491 134
42 3300005445 Ga0070708_100037829 Ga0070708_1000378295 134
43 3300005445 Ga0070708_100051777 Ga0070708_1000517775 134
44 3300005445 Ga0070708_100079289 Ga0070708_1000792894 134
45 3300005445 Ga0070708_100674525 Ga0070708_1006745251 134
46 3300005457 Ga0070662_101617138 Ga0070662_1016171381 134
47 3300005467 Ga0070706_100037013 Ga0070706_1000370135 134
48 3300005467 Ga0070706_100092138 Ga0070706_1000921382 134
49 3300005468 Ga0070707_100398712 Ga0070707_1003987122 134
50 3300005468 Ga0070707_100398925 Ga0070707_1003989251 134
51 3300005471 Ga0070698_100111682 Ga0070698_1001116823 134
52 3300005471 Ga0070698_100438365 Ga0070698_1004383651 134
53 3300005471 Ga0070698_100503029 Ga0070698_1005030292 134
54 3300005471 Ga0070698_100675370 Ga0070698_1006753701 134
55 3300005518 Ga0070699_100130231 Ga0070699_1001302314 134
56 3300005518 Ga0070699_101192165 Ga0070699_1011921651 134
57 3300005536 Ga0070697_100130734 Ga0070697_1001307342 134
58 3300005546 Ga0070696_101192499 Ga0070696_1011924991 134
59 3300005617 Ga0068859_100234414 Ga0068859_1002344141 134
60 3300005719 Ga0068861_101936884 Ga0068861_1019368841 134
61 3300005719 Ga0068861_102589906 Ga0068861_1025899061 134
62 3300005842 Ga0068858_100111015 Ga0068858_1001110152 134
63 3300005844 Ga0068862_102092268 Ga0068862_1020922681 134
64 3300005937 Ga0081455_10003000 Ga0081455_1000300016 134
65 3300005937 Ga0081455_10009731 Ga0081455_100097318 134
66 3300005937 Ga0081455_10227112 Ga0081455_102271122 134
67 3300005981 Ga0081538_10094413 Ga0081538_100944133 134
68 3300005981 Ga0081538_10249345 Ga0081538_102493452 134
69 3300005983 Ga0081540_1027628 Ga0081540_10276284 134
70 3300005983 Ga0081540_1209453 Ga0081540_12094531 134
71 3300005985 Ga0081539_10003391 Ga0081539_1000339110 134
72 3300005985 Ga0081539_10046958 Ga0081539_100469585 134
73 3300006194 Ga0075427_10003871 Ga0075427_100038712 134
74 3300006844 Ga0075428_100018918 Ga0075428_10001891811 134
75 3300006844 Ga0075428_100036582 Ga0075428_10003658211 134
76 3300006844 Ga0075428_100049780 Ga0075428_1000497801 134
77 3300006844 Ga0075428_100181283 Ga0075428_1001812834 134
78 3300006844 Ga0075428_100191397 Ga0075428_1001913972 134
79 3300006844 Ga0075428_100311026 Ga0075428_1003110262 134
80 3300006844 Ga0075428_100512772 Ga0075428_1005127721 134
81 3300006844 Ga0075428_100912627 Ga0075428_1009126271 134
82 3300006846 Ga0075430_100082228 Ga0075430_1000822282 134
83 3300006846 Ga0075430_100329181 Ga0075430_1003291812 134
84 3300006846 Ga0075430_100716697 Ga0075430_1007166971 134
85 3300006847 Ga0075431_100041810 Ga0075431_1000418105 134
86 3300006847 Ga0075431_100053058 Ga0075431_1000530582 134
87 3300006847 Ga0075431_100166001 Ga0075431_1001660012 134
88 3300006847 Ga0075431_100797101 Ga0075431_1007971012 134
89 3300006852 Ga0075433_10176096 Ga0075433_101760962 134
90 3300006852 Ga0075433_10363802 Ga0075433_103638022 134
91 3300006852 Ga0075433_11767971 Ga0075433_117679711 134
92 3300006871 Ga0075434_101110832 Ga0075434_1011108321 134
93 3300006880 Ga0075429_100012464 Ga0075429_1000124646 134
94 3300006880 Ga0075429_100091123 Ga0075429_1000911232 134
95 3300006880 Ga0075429_100548942 Ga0075429_1005489422 134
96 3300006880 Ga0075429_100553054 Ga0075429_1005530541 134
97 3300006931 Ga0097620_100234401 Ga0097620_1002344011 134
98 3300007265 Ga0099794_10036532 Ga0099794_100365323 134
99 3300009094 Ga0111539_10334051 Ga0111539_103340512 134
100 3300009094 Ga0111539_10723685 Ga0111539_107236853 134
101 3300009098 Ga0105245_10147606 Ga0105245_101476062 134
102 3300009147 Ga0114129_10009525 Ga0114129_100095257 134
103 3300009147 Ga0114129_10077356 Ga0114129_100773565 134
104 3300009147 Ga0114129_10121714 Ga0114129_101217146 134
105 3300009147 Ga0114129_11789722 Ga0114129_117897221 134
106 3300009553 Ga0105249_10189329 Ga0105249_101893291 134
107 3300009553 Ga0105249_10435560 Ga0105249_104355601 134
108 3300009553 Ga0105249_11272025 Ga0105249_112720251 134
109 3300013306 Ga0163162_10002922 Ga0163162_1000292212 134
110 3300013308 Ga0157375_10537039 Ga0157375_105370393 134
111 3300014968 Ga0157379_10047365 Ga0157379_100473653 134
112 3300025910 Ga0207684_10013159 Ga0207684_100131596 134
113 3300025922 Ga0207646_10341404 Ga0207646_103414042 134
114 3300025922 Ga0207646_10371664 Ga0207646_103716641 134
115 3300025936 Ga0207670_10234037 Ga0207670_102340372 134
116 3300025939 Ga0207665_11264916 Ga0207665_112649161 134
117 3300026023 Ga0207677_10315077 Ga0207677_103150773 134
118 3300026035 Ga0207703_10159405 Ga0207703_101594052 134
119 3300026118 Ga0207675_101976361 Ga0207675_1019763611 134
120 3300027907 Ga0207428_10325337 Ga0207428_103253372 134
121 3300031852 Ga0307410_11033167 Ga0307410_110331671 134
122 3300031852 Ga0307410_11054909 Ga0307410_110549091 134
123 3300032002 Ga0307416_101333310 Ga0307416_1013333101 134
124 3300032002 Ga0307416_101653814 Ga0307416_1016538141 134
125 3300035724 Ga0373933_0693354 Ga0373933_0693354_213_623 134
126 3300042005 Ga0439448_0191791 Ga0439448_0191791_42_458 134
127 3300042461 Ga0439460_0007767 Ga0439460_0007767_591_1007 134
128 3300042461 Ga0439460_0058094 Ga0439460_0058094_310_726 134
129 3300042993 Ga0439440_0024116 Ga0439440_0024116_164_580 134
130 3300044901 Ga0466960_0013370 Ga0466960_0013370_1585_1995 134
131 3300049570 Ga0501033_0399139 Ga0501033_0399139_324_734 134
132 3300049570 Ga0501033_0631473 Ga0501033_0631473_157_567 134
133 3300049574 Ga0501038_0167498 Ga0501038_0167498_258_668 134
134 3300049575 Ga0501039_0011588 Ga0501039_0011588_2242_2652 134
135 3300049575 Ga0501039_0329638 Ga0501039_0329638_273_683 134
136 3300049576 Ga0501040_0197030 Ga0501040_0197030_642_1052 134
137 3300049576 Ga0501040_0354976 Ga0501040_0354976_607_1017 134
138 3300049576 Ga0501040_0666850 Ga0501040_0666850_117_527 134
139 3300049577 Ga0501041_0318246 Ga0501041_0318246_292_702 134
140 3300049578 Ga0501042_0475145 Ga0501042_0475145_197_607 134
141 3300049578 Ga0501042_0790921 Ga0501042_0790921_161_571 134
142 3300049579 Ga0501043_0721493 Ga0501043_0721493_163_573 134
143 3300049582 Ga0501048_0123216 Ga0501048_0123216_896_1306 134
144 3300049584 Ga0501068_0476442 Ga0501068_0476442_383_793 134
145 3300049584 Ga0501068_0582769 Ga0501068_0582769_201_611 134
146 3300049587 Ga0501071_0098217 Ga0501071_0098217_642_1052 134
147 3300049588 Ga0501072_0027916 Ga0501072_0027916_359_769 134
148 3300049591 Ga0501075_1516115 Ga0501075_1516115_19_429 134
149 3300049592 Ga0501076_0184186 Ga0501076_0184186_1219_1629 134
150 3300049593 Ga0501077_0085765 Ga0501077_0085765_1458_1868 134
151 3300049741 Ga0501079_1518716 Ga0501079_1518716_106_516 134
152 3300049742 Ga0501080_0563519 Ga0501080_0563519_189_599 134
153 3300049742 Ga0501080_1102919 Ga0501080_1102919_85_495 134
154 3300049743 Ga0501081_0390916 Ga0501081_0390916_357_767 134
155 3300049822 Ga0501035_0505007 Ga0501035_0505007_182_592 134
156 3300049824 Ga0501045_1079774 Ga0501045_1079774_102_512 134
157 3300050507 nmdc:mga05p37_1286621_c1 nmdc:mga05p37_1286621_c1_150_560 134
158 3300050507 nmdc:mga05p37_14321_c1 nmdc:mga05p37_14321_c1_8924_9334 134
159 3300050507 nmdc:mga05p37_349658_c1 nmdc:mga05p37_349658_c1_1240_1656 134
160 3300050507 nmdc:mga05p37_878837_c1 nmdc:mga05p37_878837_c1_12_428 134
161 3300050507 nmdc:mga05p37_949957_c1 nmdc:mga05p37_949957_c1_350_766 134
162 3300050508 nmdc:mga09592_21175_c1 nmdc:mga09592_21175_c1_4877_5287 134
163 3300050508 nmdc:mga09592_24910_c1 nmdc:mga09592_24910_c1_927_1343 134
164 3300050508 nmdc:mga09592_96137_c1 nmdc:mga09592_96137_c1_1935_2345 134
165 3300050509 nmdc:mga0qj67_176123_c1 nmdc:mga0qj67_176123_c1_688_1104 134
166 3300050509 nmdc:mga0qj67_459929_c1 nmdc:mga0qj67_459929_c1_377_787 134
167 3300050509 nmdc:mga0qj67_795382_c1 nmdc:mga0qj67_795382_c1_194_604 134
168 3300050510 nmdc:mga06r32_1473023_c1 nmdc:mga06r32_1473023_c1_129_539 134
169 3300050510 nmdc:mga06r32_238387_c1 nmdc:mga06r32_238387_c1_162_572 134
170 3300050510 nmdc:mga06r32_274679_c1 nmdc:mga06r32_274679_c1_715_1131 134
171 3300050511 nmdc:mga08y16_176309_c1 nmdc:mga08y16_176309_c1_364_774 134
172 3300050511 nmdc:mga08y16_290342_c1 nmdc:mga08y16_290342_c1_1115_1531 134
173 3300050515 nmdc:mga0a205_60216_c1 nmdc:mga0a205_60216_c1_2911_3327 134
174 3300050515 nmdc:mga0a205_633761_c1 nmdc:mga0a205_633761_c1_203_613 134
175 3300050515 nmdc:mga0a205_685453_c1 nmdc:mga0a205_685453_c1_173_589 134
176 3300054114 Ga0501084_0080395 Ga0501084_0080395_870_1280 134
177 3300060353 Ga0501082_0029238 Ga0501082_0029238_1447_1857 134
178 3300060353 Ga0501082_0399329 Ga0501082_0399329_580_990 134
179 3300061734 Ga0530510_0015538 Ga0530510_0015538_2177_2587 134
180 3300061734 Ga0530510_0158108 Ga0530510_0158108_412_822 134
181 iso_pu_bacteria 2855683550 2855684215 134
182 iso_pu_bacteria 2887478801 2887484175 134
183 3300005435 Ga0070714_100000006 Ga0070714_100000006197 135
184 3300009093 Ga0105240_10129910 Ga0105240_101299102 135
185 3300009093 Ga0105240_10563664 Ga0105240_105636642 135
186 3300025913 Ga0207695_10091209 Ga0207695_100912093 135
187 3300025913 Ga0207695_10227141 Ga0207695_102271412 135
188 3300025924 Ga0207694_10379052 Ga0207694_103790522 135
189 3300025929 Ga0207664_10000032 Ga0207664_1000003292 135
190 3300049578 Ga0501042_0218943 Ga0501042_0218943_216_641 135
191 iso_pu_bacteria 8054727385 8054730904 135
192 iso_pu_bacteria 8054734606 8054735035 135
193 3300039450 Ga0436363_1518780 Ga0436363_1518780_393_806 136
194 3300053139 Ga0500568_0027080 Ga0500568_0027080_1768_2181 136
195 3300053153 Ga0500616_0000794 Ga0500616_0000794_7335_7748 136
196 iso_pu_bacteria 2808606522 2809593867 136
197 3300005535 Ga0070684_100861763 Ga0070684_1008617632 138
198 3300041503 Ga0451847_0456512 Ga0451847_0456512_46_465 138
199 3300041512 Ga0451853_1507682 Ga0451853_1507682_132_551 138
200 3300046616 Ga0495668_0000604 Ga0495668_0000604_3241_3660 138
201 3300046660 Ga0495625_0000792 Ga0495625_0000792_21287_21706 138
202 3300048091 Ga0495626_0000952 Ga0495626_0000952_3442_3861 138
203 3300049585 Ga0501069_0008811 Ga0501069_0008811_3316_3735 138
204 3300049586 Ga0501070_0002641 Ga0501070_0002641_5324_5743 138
205 3300049589 Ga0501073_0061419 Ga0501073_0061419_1619_2038 138
206 3300049742 Ga0501080_0007845 Ga0501080_0007845_1782_2201 138
207 iso_pu_bacteria 2883821847 2883823923 138
208 iso_pu_bacteria 2855670206 2855672313 139
209 iso_pu_bacteria 2855676851 2855681307 139
210 iso_pu_bacteria 2857288857 2857292673 139
211 iso_pu_bacteria 2858848962 2858849800 139
212 iso_pu_bacteria 2858882152 2858888621 139
213 iso_pu_bacteria 2858888857 2858890671 139
214 iso_pu_bacteria 2858895516 2858898398 139
215 iso_pu_bacteria 2869048445 2869053575 139
216 iso_pu_bacteria 2869061728 2869066833 139
217 iso_pu_bacteria 2869068681 2869072892 139
218 iso_pu_bacteria 2929226422 2929227239 139
219 3300005339 Ga0070660_100227076 Ga0070660_1002270761 140
220 3300005455 Ga0070663_100343874 Ga0070663_1003438742 140
221 3300005530 Ga0070679_100523086 Ga0070679_1005230862 140
222 3300005563 Ga0068855_101799790 Ga0068855_1017997902 140
223 3300025919 Ga0207657_10372449 Ga0207657_103724492 140
224 3300025921 Ga0207652_10386497 Ga0207652_103864971 140
225 3300025949 Ga0207667_11070728 Ga0207667_110707282 140
226 3300026067 Ga0207678_10657165 Ga0207678_106571651 140
227 3300026067 Ga0207678_10709752 Ga0207678_107097521 140
228 3300038443 Ga0395901_0591599 Ga0395901_0591599_668_1096 140
229 3300049585 Ga0501069_0404768 Ga0501069_0404768_178_603 140
230 3300049586 Ga0501070_0007735 Ga0501070_0007735_3681_4106 140
231 iso_pu_bacteria 2802429296 2804844771 140
232 iso_pu_bacteria 8025413630 8025419221 140
233 3300005329 Ga0070683_100555496 Ga0070683_1005554961 141
234 3300020082 Ga0206353_10230365 Ga0206353_102303652 141
235 3300020082 Ga0206353_10270566 Ga0206353_102705662 141
236 3300025919 Ga0207657_10272389 Ga0207657_102723892 141
237 3300025921 Ga0207652_11059917 Ga0207652_110599171 141
238 3300025944 Ga0207661_11502750 Ga0207661_115027501 141
239 3300026067 Ga0207678_11020003 Ga0207678_110200032 141
240 3300026116 Ga0207674_10019144 Ga0207674_100191449 141
241 3300035691 Ga0373931_0318651 Ga0373931_0318651_174_602 141
242 3300044684 Ga0466966_0115250 Ga0466966_0115250_813_1250 141
243 3300044693 Ga0466961_0076791 Ga0466961_0076791_785_1222 141
244 3300044719 Ga0466971_0012030 Ga0466971_0012030_2294_2731 141
245 3300045049 Ga0466959_0197302 Ga0466959_0197302_831_1268 141
246 3300046459 Ga0495629_0168884 Ga0495629_0168884_33_485 141
247 3300046476 Ga0495662_0493727 Ga0495662_0493727_87_539 141
248 3300061719 Ga0466962_0199152 Ga0466962_0199152_132_569 141
249 3300035207 Ga0373942_0246212 Ga0373942_0246212_79_507 142
250 3300041452 Ga0451793_0831805 Ga0451793_0831805_134_571 142
251 3300041512 Ga0451853_3988433 Ga0451853_3988433_418_852 142
252 3300048904 Ga0496101_0186498 Ga0496101_0186498_62_490 142
253 3300048909 Ga0496106_0037245 Ga0496106_0037245_2661_3089 142
254 3300048910 Ga0496107_1297633 Ga0496107_1297633_33_461 142
255 3300048918 Ga0496115_0330856 Ga0496115_0330856_53_481 142
256 3300003162 Ga0006778J45830_1012765 Ga0006778J45830_10127652 143
257 3300003308 Ga0006777J48905_1009494 Ga0006777J48905_10094942 143
258 3300003579 Ga0007429J51699_1008853 Ga0007429J51699_10088532 143
259 3300005337 Ga0070682_101083314 Ga0070682_1010833142 143
260 3300005458 Ga0070681_10365085 Ga0070681_103650853 143
261 3300009551 Ga0105238_10653672 Ga0105238_106536722 143
262 3300013105 Ga0157369_10564579 Ga0157369_105645793 143
263 3300013308 Ga0157375_10245841 Ga0157375_102458411 143
264 3300020080 Ga0206350_11498727 Ga0206350_114987271 143
265 3300025924 Ga0207694_11843768 Ga0207694_118437681 143
266 3300035170 Ga0373943_0584913 Ga0373943_0584913_135_566 143
267 3300036401 Ga0373937_1729458 Ga0373937_1729458_19_492 143
268 3300039447 Ga0436361_0954731 Ga0436361_0954731_338_781 143
269 3300046543 Ga0495645_0244216 Ga0495645_0244216_336_773 143
270 3300046559 Ga0495667_0329550 Ga0495667_0329550_331_762 143
271 3300046663 Ga0495635_1101399 Ga0495635_1101399_18_470 143
272 3300047322 Ga0495680_0044596 Ga0495680_0044596_1081_1554 143
273 3300047444 Ga0495675_0309862 Ga0495675_0309862_219_656 143
274 3300047471 Ga0495684_0166627 Ga0495684_0166627_1075_1512 143
275 3300047471 Ga0495684_0249232 Ga0495684_0249232_366_797 143
276 3300048088 Ga0495602_0267532 Ga0495602_0267532_611_1048 143
277 3300048905 Ga0496102_0592604 Ga0496102_0592604_208_681 143
278 3300048908 Ga0496105_1199318 Ga0496105_1199318_36_467 143
279 3300048909 Ga0496106_0165594 Ga0496106_0165594_330_803 143
280 3300048909 Ga0496106_0369343 Ga0496106_0369343_420_851 143
281 3300048912 Ga0496109_0825036 Ga0496109_0825036_29_502 143
282 3300048913 Ga0496110_0451097 Ga0496110_0451097_347_820 143

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

18

105

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2aq6-assembly1.cif.gz_B x-ray crystal structure of mycobacterium tuberculosis pyridoxine 5'-phosphate oxidase complexed with pyridoxal 5'-phosphate at 1.7 a resolution 0.9268 3 143
1wv4-assembly1.cif.gz_B x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase in tetragonal crystal form 0.9041 16 88
5jab-assembly1.cif.gz_B structure of the biliverdin reductase rv2074 from mycobacterium tuberculosis in complex with f420 0.8612 4 140
1wv4-assembly1.cif.gz_A x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase in tetragonal crystal form 0.861 10 142
2i02-assembly1.cif.gz_A crystal structure of a pyridoxamine 5'-phosphate oxidase-like family protein (npun_r6570) from nostoc punctiforme pcc 73102 at 1.80 a resolution 0.8443 10 142
ID Description Score Start End Superfamily
1w9aB00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9628 7 141 2.30.110.10
1w9aB00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9101 7 141 2.30.110.10
1wv4B00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9041 16 88 2.30.110.10
2htdA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8221 4 138 2.30.110.10
2asfA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8202 5 139 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A1V4AEP4-F1-model_v4 PPOX class F420-dependent enzyme 0.9928 10 142 GO:0005829
GO:0016627
GO:0070967
AF-A0A1C4XIP4-F1-model_v4 PPOX class probable F420-dependent enzyme 0.9895 7 143 GO:0005829
GO:0016627
GO:0070967
AF-A0A2W4J727-F1-model_v4 PPOX class F420-dependent oxidoreductase 0.9885 3 142 GO:0005829
GO:0016627
GO:0070967
AF-A0A838GNQ5-F1-model_v4 PPOX class F420-dependent oxidoreductase 0.9885 10 127 GO:0005829
GO:0016627
GO:0070967
AF-A0A7K1H583-F1-model_v4 PPOX class F420-dependent oxidoreductase 0.9884 7 143 GO:0005829
GO:0016627
GO:0070967

Feature Viewer

pLDDT pTM Quality
95.38 0.89 High
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Predicted Structure (AlphaFold2)

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