F384450

General Info

Members Datasets Scaffolds Average Seq Length
281 186 562 380

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_0473446|Ga0436361_0473446_791_2053
Length 420
Sequence LTAGTLAIIFARRGRARRVSDGLPQDLSAMTDTTAALPAPRPPDCNAALVLADGAVFWGRGIGAPGTAVGEVCFNTAITGYQEILTDPSYAGQIITFTFPHIGNVGANLEDLESTTPAARGLVIRTPITEPANYRATQRLDTWLKSYGLVGVAGVDTRRLTRRIRDGGPPNGVVAYRADGKLDIAALREAALAWPGLEGMDLAREVTCRQTYEWQETRWEREHGYGRLEAPRFHVVAIDYGAKRNILRMLASHGCRVTVVPATATTDDVLRHEPDGVFLSNGPGDPAATGVYAVPVLRALLASGKPIFGICLGHQLMALALGGRTRKMERGHRGANHPVKDLATGRVEITSQNHGFVVDPDSLPSGVEPTHLSLFDRTNEGLHITGRPVFTVQHHPEASPGPQDSHYLFERFVSLMEQHG

Samples

Sample ID Description Type Environment
1 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
45 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
46 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
72 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
73 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
74 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
75 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
76 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
77 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
80 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
81 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
82 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
83 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
84 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
85 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
86 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
90 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
92 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
93 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
94 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
95 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
96 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
97 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
109 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
110 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
111 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
112 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
113 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
114 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
118 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
119 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
120 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
121 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
122 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
142 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
143 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
144 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
145 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
146 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
147 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
148 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
160 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
161 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
162 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
163 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
164 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
165 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
166 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
167 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
168 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
169 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
170 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
171 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
172 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
173 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
174 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
175 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
176 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
177 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
178 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
179 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
180 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
181 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
182 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
183 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
184 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
185 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
186 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.09
Metatranscriptomes 0.36
Isolates 3.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.63
Nodule 0.71
Rhizoplane 1.42
Rhizosphere 81.85
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436361_0473446 3300039447 Bacteria 2295
2 rootH1_10009569 3300003323 Bacteria 3422
3 Ga0070658_10139885 3300005327 Bacteria 2022
4 Ga0068869_100059442 3300005334 Bacteria 2799
5 Ga0070689_100046453 3300005340 Bacteria 3346
6 Ga0070689_100257399 3300005340 Bacteria 1442
7 Ga0070674_100013904 3300005356 Bacteria 4990
8 Ga0070688_100107835 3300005365 Bacteria 1847
9 Ga0070709_10016470 3300005434 Bacteria 4221
10 Ga0070714_100007835 3300005435 Bacteria 8319
11 Ga0070714_100066841 3300005435 Bacteria 3099
12 Ga0070714_100145992 3300005435 Bacteria 2128
13 Ga0070713_100111135 3300005436 Bacteria 2389
14 Ga0070713_100120471 3300005436 Bacteria 2300
15 Ga0070710_10005364 3300005437 Bacteria 6081
16 Ga0070711_100004943 3300005439 Bacteria 7915
17 Ga0070711_100053134 3300005439 Bacteria 2790
18 Ga0070711_100100257 3300005439 Bacteria 2106
19 Ga0070678_100016347 3300005456 Bacteria 4746
20 Ga0070681_10001073 3300005458 Bacteria 23282
21 Ga0070681_10141607 3300005458 Bacteria 2334
22 Ga0070681_10186122 3300005458 Bacteria 1997
23 Ga0070685_10055449 3300005466 Bacteria 2303
24 Ga0070706_100039470 3300005467 Bacteria 4359
25 Ga0070706_100196178 3300005467 Bacteria 1886
26 Ga0070707_100071098 3300005468 Bacteria 3352
27 Ga0070698_100001662 3300005471 Bacteria 24809
28 Ga0070698_100002609 3300005471 Bacteria 19861
29 Ga0070679_100011063 3300005530 Bacteria 8584
30 Ga0070679_100025585 3300005530 Bacteria 5794
31 Ga0070679_100053553 3300005530 Bacteria 4016
32 Ga0070696_100201863 3300005546 Bacteria 1485
33 Ga0070704_100010476 3300005549 Bacteria 5642
34 Ga0070704_100043744 3300005549 Bacteria 3106
35 Ga0068855_100002866 3300005563 Bacteria 21185
36 Ga0068857_100172354 3300005577 Bacteria 1967
37 Ga0068856_100114391 3300005614 Bacteria 2697
38 Ga0068861_100047792 3300005719 Bacteria 3232
39 Ga0081538_10005356 3300005981 Bacteria 11527
40 Ga0081538_10006386 3300005981 Bacteria 10386
41 Ga0081538_10063151 3300005981 Bacteria 2105
42 Ga0070717_10000755 3300006028 Bacteria 21129
43 Ga0070717_10058194 3300006028 Bacteria 3196
44 Ga0070717_10061364 3300006028 Bacteria 3116
45 Ga0070717_10238889 3300006028 Bacteria 1601
46 Ga0070717_10251801 3300006028 Bacteria 1560
47 Ga0070712_100017771 3300006175 Bacteria 4607
48 Ga0070712_100109774 3300006175 Bacteria 2056
49 Ga0075366_10046927 3300006195 Bacteria 2560
50 Ga0075433_10202749 3300006852 Bacteria 1763
51 Ga0075434_100159070 3300006871 Bacteria 2278
52 Ga0075434_100273922 3300006871 Bacteria 1707
53 Ga0075429_100206354 3300006880 Bacteria 1721
54 Ga0075429_100215957 3300006880 Bacteria 1680
55 Ga0075436_100060394 3300006914 Bacteria 2618
56 Ga0075436_100115996 3300006914 Bacteria 1871
57 Ga0075435_100130181 3300007076 Bacteria 2105
58 Ga0105240_10000114 3300009093 Bacteria 166405
59 Ga0105240_10092725 3300009093 Bacteria 3687
60 Ga0105245_10000032 3300009098 Bacteria 150103
61 Ga0105245_10126767 3300009098 Bacteria 2390
62 Ga0114129_10405245 3300009147 Bacteria 1797
63 Ga0105249_10162237 3300009553 Bacteria 2161
64 Ga0105249_10412738 3300009553 Bacteria 1382
65 Ga0105239_10264634 3300010375 Bacteria 1933
66 Ga0157370_10012616 3300013104 Bacteria 8756
67 Ga0157370_10247026 3300013104 Bacteria 1651
68 Ga0157369_10018925 3300013105 Bacteria 7716
69 Ga0157369_10284034 3300013105 Bacteria 1723
70 Ga0157374_10029643 3300013296 Bacteria 4959
71 Ga0157376_10003921 3300014969 Bacteria 10284
72 Ga0213872_10004800 3300021361 Bacteria 7058
73 Ga0213872_10035071 3300021361 Bacteria 2294
74 Ga0213872_10042411 3300021361 Bacteria 2075
75 Ga0213872_10099873 3300021361 Bacteria 1294
76 Ga0213875_10000305 3300021388 Bacteria 46895
77 Ga0213875_10003694 3300021388 Bacteria 8631
78 Ga0213875_10031206 3300021388 Bacteria 2521
79 Ga0213871_10020676 3300021441 Bacteria 1634
80 Ga0207699_10004934 3300025906 Bacteria 6386
81 Ga0207705_10114482 3300025909 Bacteria 1995
82 Ga0207684_10034612 3300025910 Bacteria 4292
83 Ga0207684_10210888 3300025910 Bacteria 1676
84 Ga0207707_10004903 3300025912 Bacteria 11760
85 Ga0207707_10055147 3300025912 Bacteria 3458
86 Ga0207707_10111481 3300025912 Bacteria 2392
87 Ga0207695_10066897 3300025913 Bacteria 3688
88 Ga0207693_10002561 3300025915 Bacteria 15808
89 Ga0207693_10052383 3300025915 Bacteria 3201
90 Ga0207693_10066267 3300025915 Bacteria 2827
91 Ga0207663_10090038 3300025916 Bacteria 2033
92 Ga0207660_10037763 3300025917 Bacteria 3368
93 Ga0207652_10006165 3300025921 Bacteria 9692
94 Ga0207652_10073817 3300025921 Bacteria 2968
95 Ga0207646_10039214 3300025922 Bacteria 4263
96 Ga0207646_10121577 3300025922 Bacteria 2346
97 Ga0207694_10040932 3300025924 Bacteria 3570
98 Ga0207687_10000066 3300025927 Bacteria 80190
99 Ga0207687_10111095 3300025927 Bacteria 2034
100 Ga0207700_10007264 3300025928 Bacteria 6759
101 Ga0207664_10133422 3300025929 Bacteria 2093
102 Ga0207669_10006444 3300025937 Bacteria 5366
103 Ga0207665_10009010 3300025939 Bacteria 6548
104 Ga0207689_10184289 3300025942 Bacteria 1722
105 Ga0207667_10012413 3300025949 Bacteria 9820
106 Ga0207667_10134567 3300025949 Bacteria 2545
107 Ga0207708_10143427 3300026075 Bacteria 1875
108 Ga0207702_10076441 3300026078 Bacteria 2895
109 Ga0207702_10096727 3300026078 Bacteria 2597
110 Ga0207674_10205160 3300026116 Bacteria 1920
111 Ga0207675_100179465 3300026118 Bacteria 2027
112 Ga0207683_10086792 3300026121 Bacteria 2782
113 Ga0268266_10003262 3300028379 Bacteria 16352
114 Ga0265337_1002238 3300028556 Bacteria 8992
115 Ga0307515_10002368 3300028794 Bacteria 41144
116 Ga0265760_10000034 3300031090 Bacteria 47855
117 Ga0265332_10026648 3300031238 Bacteria 2535
118 Ga0265320_10000435 3300031240 Bacteria 32888
119 Ga0265320_10008341 3300031240 Bacteria 6346
120 Ga0265340_10057127 3300031247 Bacteria 1876
121 Ga0265331_10001418 3300031250 Bacteria 17590
122 Ga0265327_10000100 3300031251 Bacteria 189591
123 Ga0265327_10001216 3300031251 Bacteria 34696
124 Ga0307513_10005300 3300031456 Bacteria 17066
125 Ga0307509_10000007 3300031507 Bacteria 409278
126 Ga0307509_10004251 3300031507 Bacteria 20870
127 Ga0307509_10013739 3300031507 Bacteria 9561
128 Ga0265313_10000280 3300031595 Bacteria 55923
129 Ga0307508_10019358 3300031616 Bacteria 6186
130 Ga0265314_10103478 3300031711 Bacteria 1825
131 Ga0316576_10063583 3300031727 Bacteria 2709
132 Ga0316578_10020210 3300031728 Bacteria 3676
133 Ga0316578_10090478 3300031728 Bacteria 1827
134 Ga0307516_10018042 3300031730 Bacteria 7341
135 Ga0307406_10010233 3300031901 Bacteria 5286
136 Ga0307416_100162800 3300032002 Bacteria 2065
137 Ga0307507_10072324 3300033179 Bacteria 3109
138 Ga0373923_0059089 3300035111 Bacteria 1625
139 Ga0373936_0000009 3300035113 Bacteria 263478
140 Ga0373953_0010835 3300035117 Bacteria 3184
141 Ga0373954_0023081 3300035118 Bacteria 2826
142 Ga0373956_0051676 3300035119 Bacteria 1847
143 Ga0373955_0051536 3300035172 Bacteria 2242
144 Ga0373961_0000148 3300035241 Bacteria 34406
145 Ga0373933_0003617 3300035724 Bacteria 8568
146 Ga0373947_0144860 3300035725 Bacteria 1526
147 Ga0373937_0013477 3300036401 Bacteria 7199
148 Ga0373937_0019283 3300036401 Bacteria 6105
149 Ga0373937_0040175 3300036401 Bacteria 4264
150 Ga0373937_0105424 3300036401 Bacteria 2619
151 Ga0373937_0111446 3300036401 Bacteria 2545
152 Ga0373937_0254116 3300036401 Bacteria 1657
153 Ga0373925_0167144 3300037068 Bacteria 1735
154 Ga0395899_0175524 3300037312 Bacteria 1507
155 Ga0395900_0070386 3300037418 Bacteria 3596
156 Ga0395898_0252500 3300037466 Bacteria 1682
157 Ga0395905_0015055 3300037471 Bacteria 7369
158 Ga0436364_0080149 3300037853 Bacteria 57380
159 Ga0436364_0559148 3300037853 Bacteria 3000
160 Ga0436364_0936501 3300037853 Bacteria 40899
161 Ga0436364_1256282 3300037853 Bacteria 2245
162 Ga0436364_1339489 3300037853 Bacteria 1957
163 Ga0436364_1525673 3300037853 Bacteria 28219
164 Ga0395901_0057326 3300038443 Bacteria 4051
165 Ga0436365_1545097 3300039437 Bacteria 2004
166 Ga0436365_1850800 3300039437 Bacteria 1996
167 Ga0436365_1929221 3300039437 Bacteria 1866
168 Ga0436360_0459387 3300039438 Bacteria 3693
169 Ga0436360_0907080 3300039438 Bacteria 4588
170 Ga0436360_0983518 3300039438 Bacteria 1681
171 Ga0436361_0131479 3300039447 Bacteria 2481
172 Ga0436361_0462945 3300039447 Bacteria 1450
173 Ga0436361_0478486 3300039447 Bacteria 2114
174 Ga0436363_0085191 3300039450 Bacteria 3654
175 Ga0436363_0504423 3300039450 Bacteria 1644
176 Ga0436363_0593077 3300039450 Bacteria 1622
177 Ga0436362_0747865 3300039453 Bacteria 3622
178 Ga0436362_0826199 3300039453 Bacteria 9169
179 Ga0451807_0083607 3300041486 Bacteria 3001
180 Ga0451577_0110873 3300042876 Bacteria 2455
181 Ga0451577_0123360 3300042876 Bacteria 2321
182 Ga0453683_0059356 3300044673 Bacteria 2392
183 Ga0453684_0093460 3300044712 Bacteria 3704
184 Ga0453684_0273163 3300044712 Bacteria 1930
185 Ga0451576_0000056 3300045051 Bacteria 303398
186 Ga0451576_0000301 3300045051 Bacteria 119546
187 Ga0451576_0024283 3300045051 Bacteria 6549
188 Ga0451576_0092636 3300045051 Bacteria 3143
189 Ga0451576_0139040 3300045051 Bacteria 2533
190 Ga0466958_0007695 3300045836 Bacteria 5941
191 Ga0495608_0154012 3300046511 Bacteria 1464
192 Ga0495618_0118706 3300046514 Bacteria 1694
193 Ga0495586_0000533 3300046535 Bacteria 22182
194 Ga0495622_0044953 3300046557 Bacteria 2053
195 Ga0495667_0135126 3300046559 Bacteria 1590
196 Ga0495581_0052488 3300047315 Bacteria 2355
197 Ga0495680_0080843 3300047322 Bacteria 2455
198 Ga0495686_0019901 3300047472 Bacteria 4479
199 Ga0496102_0086743 3300048905 Bacteria 2891
200 Ga0496110_0056345 3300048913 Bacteria 3459
201 Ga0496115_0333469 3300048918 Bacteria 1239
202 Ga0496122_0023643 3300048925 Bacteria 5406
203 Ga0501031_0008618 3300049568 Bacteria 6631
204 Ga0501031_0028709 3300049568 Bacteria 3627
205 Ga0501033_0000011 3300049570 Bacteria 259130
206 Ga0501033_0216376 3300049570 Bacteria 1365
207 Ga0501034_0001265 3300049571 Bacteria 34324
208 Ga0501034_0161901 3300049571 Bacteria 2208
209 Ga0501036_0102084 3300049572 Bacteria 2426
210 Ga0501038_0002395 3300049574 Bacteria 17463
211 Ga0501039_0264922 3300049575 Bacteria 1351
212 Ga0501040_0086170 3300049576 Bacteria 2181
213 Ga0501041_0006485 3300049577 Bacteria 6850
214 Ga0501042_0051239 3300049578 Bacteria 2944
215 Ga0501042_0118512 3300049578 Bacteria 1906
216 Ga0501046_0073097 3300049580 Bacteria 2661
217 Ga0501047_0004053 3300049581 Bacteria 13771
218 Ga0501047_0039997 3300049581 Bacteria 4534
219 Ga0501070_0032070 3300049586 Bacteria 4398
220 Ga0501071_0015989 3300049587 Bacteria 5156
221 Ga0501072_0006477 3300049588 Bacteria 8916
222 Ga0501072_0220836 3300049588 Bacteria 1510
223 Ga0501073_0012216 3300049589 Bacteria 6269
224 Ga0501076_0236162 3300049592 Bacteria 1495
225 Ga0501227_003110 3300049665 Bacteria 3608
226 Ga0501230_015356 3300049667 Bacteria 1270
227 Ga0501225_0001540 3300049705 Bacteria 7242
228 Ga0501079_0202508 3300049741 Bacteria 1550
229 Ga0501080_0026679 3300049742 Bacteria 5368
230 Ga0501080_0050768 3300049742 Bacteria 3860
231 Ga0501080_0377750 3300049742 Bacteria 1277
232 Ga0501081_0034522 3300049743 Bacteria 3442
233 Ga0501081_0111839 3300049743 Bacteria 1939
234 Ga0501083_0001947 3300049744 Bacteria 14208
235 Ga0501083_0070873 3300049744 Bacteria 2318
236 Ga0501035_0004622 3300049822 Bacteria 13050
237 Ga0501044_0023913 3300049823 Bacteria 6493
238 Ga0501044_0026425 3300049823 Bacteria 6143
239 Ga0501045_0000053 3300049824 Bacteria 51403
240 Ga0501045_0079230 3300049824 Bacteria 2422
241 Ga0501045_0109535 3300049824 Bacteria 2047
242 nmdc:mga0k408_41353_c1 3300050493 Bacteria 2653
243 nmdc:mga05p37_455785_c1 3300050507 Bacteria 1479
244 nmdc:mga09592_212317_c1 3300050508 Bacteria 1677
245 nmdc:mga0n895_174546_c1 3300050512 Bacteria 2180
246 nmdc:mga0n895_354438_c1 3300050512 Bacteria 1486
247 nmdc:mga0a205_269107_c1 3300050515 Bacteria 1581
248 Ga0495601_0021507 3300053077 Bacteria 3951
249 Ga0500635_0005947 3300053080 Bacteria 3236
250 Ga0495595_0017021 3300053084 Bacteria 3121
251 Ga0495619_0001439 3300053085 Bacteria 15654
252 Ga0495619_0036258 3300053085 Bacteria 3210
253 Ga0500583_0038903 3300053092 Bacteria 2145
254 Ga0500566_0003716 3300053094 Bacteria 9117
255 Ga0500566_0021309 3300053094 Bacteria 3810
256 Ga0500554_000411 3300053102 Bacteria 9082
257 Ga0500572_002582 3300053111 Bacteria 4307
258 Ga0500595_000323 3300053119 Bacteria 31420
259 Ga0500559_0055497 3300053136 Bacteria 1757
260 Ga0500568_0008791 3300053139 Bacteria 4843
261 Ga0500585_025505 3300053144 Bacteria 1987
262 Ga0500603_001718 3300053150 Bacteria 4930
263 Ga0501084_0001314 3300054114 Bacteria 19564
264 Ga0501084_0013304 3300054114 Bacteria 6808
265 Ga0501084_0015637 3300054114 Bacteria 6293
266 Ga0501084_0032470 3300054114 Bacteria 4367
267 Ga0501084_0042070 3300054114 Bacteria 3822
268 Ga0501084_0229016 3300054114 Bacteria 1569
269 Ga0590071_003021 3300059421 Bacteria 4176
270 Ga0501082_0014961 3300060353 Bacteria 6687
271 Ga0530510_0009244 3300061734 Bacteria 6912
272 2512032811 2511231221 Bacteria 6846400
273 2523106583 2522572158 Bacteria 6514390
274 2524610790 2524023250 Bacteria 5457705
275 2599105715 2597490356 Bacteria 7030811
276 2842337250 2842333319 Bacteria 8899485
277 2846954598 2846952575 Bacteria 6587527
278 2848859137 2848858292 Bacteria 7391279
279 2876768122 2876761206 Bacteria 10111113
280 2897805959 2897803580 Bacteria 7000062
281 8054006303 8054002106 Bacteria 7987183
282 Ga0436361_0473446
283 rootH1_10009569
284 Ga0070658_10139885
285 Ga0068869_100059442
286 Ga0070689_100046453
287 Ga0070689_100257399
288 Ga0070674_100013904
289 Ga0070688_100107835
290 Ga0070709_10016470
291 Ga0070714_100007835
292 Ga0070714_100066841
293 Ga0070714_100145992
294 Ga0070713_100111135
295 Ga0070713_100120471
296 Ga0070710_10005364
297 Ga0070711_100004943
298 Ga0070711_100053134
299 Ga0070711_100100257
300 Ga0070678_100016347
301 Ga0070681_10001073
302 Ga0070681_10141607
303 Ga0070681_10186122
304 Ga0070685_10055449
305 Ga0070706_100039470
306 Ga0070706_100196178
307 Ga0070707_100071098
308 Ga0070698_100001662
309 Ga0070698_100002609
310 Ga0070679_100011063
311 Ga0070679_100025585
312 Ga0070679_100053553
313 Ga0070696_100201863
314 Ga0070704_100010476
315 Ga0070704_100043744
316 Ga0068855_100002866
317 Ga0068857_100172354
318 Ga0068856_100114391
319 Ga0068861_100047792
320 Ga0081538_10005356
321 Ga0081538_10006386
322 Ga0081538_10063151
323 Ga0070717_10000755
324 Ga0070717_10058194
325 Ga0070717_10061364
326 Ga0070717_10238889
327 Ga0070717_10251801
328 Ga0070712_100017771
329 Ga0070712_100109774
330 Ga0075366_10046927
331 Ga0075433_10202749
332 Ga0075434_100159070
333 Ga0075434_100273922
334 Ga0075429_100206354
335 Ga0075429_100215957
336 Ga0075436_100060394
337 Ga0075436_100115996
338 Ga0075435_100130181
339 Ga0105240_10000114
340 Ga0105240_10092725
341 Ga0105245_10000032
342 Ga0105245_10126767
343 Ga0114129_10405245
344 Ga0105249_10162237
345 Ga0105249_10412738
346 Ga0105239_10264634
347 Ga0157370_10012616
348 Ga0157370_10247026
349 Ga0157369_10018925
350 Ga0157369_10284034
351 Ga0157374_10029643
352 Ga0157376_10003921
353 Ga0213872_10004800
354 Ga0213872_10035071
355 Ga0213872_10042411
356 Ga0213872_10099873
357 Ga0213875_10000305
358 Ga0213875_10003694
359 Ga0213875_10031206
360 Ga0213871_10020676
361 Ga0207699_10004934
362 Ga0207705_10114482
363 Ga0207684_10034612
364 Ga0207684_10210888
365 Ga0207707_10004903
366 Ga0207707_10055147
367 Ga0207707_10111481
368 Ga0207695_10066897
369 Ga0207693_10002561
370 Ga0207693_10052383
371 Ga0207693_10066267
372 Ga0207663_10090038
373 Ga0207660_10037763
374 Ga0207652_10006165
375 Ga0207652_10073817
376 Ga0207646_10039214
377 Ga0207646_10121577
378 Ga0207694_10040932
379 Ga0207687_10000066
380 Ga0207687_10111095
381 Ga0207700_10007264
382 Ga0207664_10133422
383 Ga0207669_10006444
384 Ga0207665_10009010
385 Ga0207689_10184289
386 Ga0207667_10012413
387 Ga0207667_10134567
388 Ga0207708_10143427
389 Ga0207702_10076441
390 Ga0207702_10096727
391 Ga0207674_10205160
392 Ga0207675_100179465
393 Ga0207683_10086792
394 Ga0268266_10003262
395 Ga0265337_1002238
396 Ga0307515_10002368
397 Ga0265760_10000034
398 Ga0265332_10026648
399 Ga0265320_10000435
400 Ga0265320_10008341
401 Ga0265340_10057127
402 Ga0265331_10001418
403 Ga0265327_10000100
404 Ga0265327_10001216
405 Ga0307513_10005300
406 Ga0307509_10000007
407 Ga0307509_10004251
408 Ga0307509_10013739
409 Ga0265313_10000280
410 Ga0307508_10019358
411 Ga0265314_10103478
412 Ga0316576_10063583
413 Ga0316578_10020210
414 Ga0316578_10090478
415 Ga0307516_10018042
416 Ga0307406_10010233
417 Ga0307416_100162800
418 Ga0307507_10072324
419 Ga0373923_0059089
420 Ga0373936_0000009
421 Ga0373953_0010835
422 Ga0373954_0023081
423 Ga0373956_0051676
424 Ga0373955_0051536
425 Ga0373961_0000148
426 Ga0373933_0003617
427 Ga0373947_0144860
428 Ga0373937_0013477
429 Ga0373937_0019283
430 Ga0373937_0040175
431 Ga0373937_0105424
432 Ga0373937_0111446
433 Ga0373937_0254116
434 Ga0373925_0167144
435 Ga0395899_0175524
436 Ga0395900_0070386
437 Ga0395898_0252500
438 Ga0395905_0015055
439 Ga0436364_0080149
440 Ga0436364_0559148
441 Ga0436364_0936501
442 Ga0436364_1256282
443 Ga0436364_1339489
444 Ga0436364_1525673
445 Ga0395901_0057326
446 Ga0436365_1545097
447 Ga0436365_1850800
448 Ga0436365_1929221
449 Ga0436360_0459387
450 Ga0436360_0907080
451 Ga0436360_0983518
452 Ga0436361_0131479
453 Ga0436361_0462945
454 Ga0436361_0478486
455 Ga0436363_0085191
456 Ga0436363_0504423
457 Ga0436363_0593077
458 Ga0436362_0747865
459 Ga0436362_0826199
460 Ga0451807_0083607
461 Ga0451577_0110873
462 Ga0451577_0123360
463 Ga0453683_0059356
464 Ga0453684_0093460
465 Ga0453684_0273163
466 Ga0451576_0000056
467 Ga0451576_0000301
468 Ga0451576_0024283
469 Ga0451576_0092636
470 Ga0451576_0139040
471 Ga0466958_0007695
472 Ga0495608_0154012
473 Ga0495618_0118706
474 Ga0495586_0000533
475 Ga0495622_0044953
476 Ga0495667_0135126
477 Ga0495581_0052488
478 Ga0495680_0080843
479 Ga0495686_0019901
480 Ga0496102_0086743
481 Ga0496110_0056345
482 Ga0496115_0333469
483 Ga0496122_0023643
484 Ga0501031_0008618
485 Ga0501031_0028709
486 Ga0501033_0000011
487 Ga0501033_0216376
488 Ga0501034_0001265
489 Ga0501034_0161901
490 Ga0501036_0102084
491 Ga0501038_0002395
492 Ga0501039_0264922
493 Ga0501040_0086170
494 Ga0501041_0006485
495 Ga0501042_0051239
496 Ga0501042_0118512
497 Ga0501046_0073097
498 Ga0501047_0004053
499 Ga0501047_0039997
500 Ga0501070_0032070
501 Ga0501071_0015989
502 Ga0501072_0006477
503 Ga0501072_0220836
504 Ga0501073_0012216
505 Ga0501076_0236162
506 Ga0501227_003110
507 Ga0501230_015356
508 Ga0501225_0001540
509 Ga0501079_0202508
510 Ga0501080_0026679
511 Ga0501080_0050768
512 Ga0501080_0377750
513 Ga0501081_0034522
514 Ga0501081_0111839
515 Ga0501083_0001947
516 Ga0501083_0070873
517 Ga0501035_0004622
518 Ga0501044_0023913
519 Ga0501044_0026425
520 Ga0501045_0000053
521 Ga0501045_0079230
522 Ga0501045_0109535
523 nmdc:mga0k408_41353_c1
524 nmdc:mga05p37_455785_c1
525 nmdc:mga09592_212317_c1
526 nmdc:mga0n895_174546_c1
527 nmdc:mga0n895_354438_c1
528 nmdc:mga0a205_269107_c1
529 Ga0495601_0021507
530 Ga0500635_0005947
531 Ga0495595_0017021
532 Ga0495619_0001439
533 Ga0495619_0036258
534 Ga0500583_0038903
535 Ga0500566_0003716
536 Ga0500566_0021309
537 Ga0500554_000411
538 Ga0500572_002582
539 Ga0500595_000323
540 Ga0500559_0055497
541 Ga0500568_0008791
542 Ga0500585_025505
543 Ga0500603_001718
544 Ga0501084_0001314
545 Ga0501084_0013304
546 Ga0501084_0015637
547 Ga0501084_0032470
548 Ga0501084_0042070
549 Ga0501084_0229016
550 Ga0590071_003021
551 Ga0501082_0014961
552 Ga0530510_0009244
553 2512032811
554 2523106583
555 2524610790
556 2599105715
557 2842337250
558 2846954598
559 2848859137
560 2876768122
561 2897805959
562 8054006303

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00988

CPSase_sm_chain

Carbamoyl-phosphate synthase small chain, CPSase domain

49

174

0.99

PF00117

GATase

Glutamine amidotransferase class-I

236

415

0.96

PF07722

Peptidase_C26

Peptidase C26

285

372

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
1jdb-assembly1.cif.gz_F carbamoyl phosphate synthetase from escherichia coli 0.9197 4 378
1c30-assembly1.cif.gz_B crystal structure of carbamoyl phosphate synthetase: small subunit mutation c269s 0.9177 4 378
1m6v-assembly1.cif.gz_D crystal structure of the g359f (small subunit) point mutant of carbamoyl phosphate synthetase 0.9174 4 378
1a9x-assembly1.cif.gz_B carbamoyl phosphate synthetase: caught in the act of glutamine hydrolysis 0.9169 4 378
1cs0-assembly4.cif.gz_B crystal structure of carbamoyl phosphate synthetase complexed at cys269 in the small subunit with the tetrahedral mimic l-glutamate gamma-semialdehyde 0.9165 4 378
ID Description Score Start End Superfamily
af_Q2FZ73_174_352_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9668 199 373 3.40.50.880
af_K7TZS8_259_480_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.964 154 378 3.40.50.880
af_P9WPK5_1_155_3.50.30.20 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;Carbamoyl-phosphate synthase small subunit, N-terminal domain 0.958 5 151 3.50.30.20
af_Q58425_140_353_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9542 148 379 3.40.50.880
af_Q58425_140_353_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9455 148 379 3.40.50.880
ID Description Score Start End GO Terms
AF-A0A2S8K3P7-F1-model_v4 deleted 0.9907 222 325
AF-X1QMB8-F1-model_v4 carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC 6.3.5.5) 0.9855 223 325 GO:0005524
GO:0016874
AF-A0A7Z9XQK1-F1-model_v4 carbamoyl-phosphate synthase (ammonia) (EC 6.3.4.16) 0.9791 197 353 GO:0004088
GO:0005524
GO:0005737
GO:0006221
GO:0006541
GO:0046872
AF-A0A3D3R4D5-F1-model_v4 carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC 6.3.5.5) 0.9735 200 378 GO:0005524
GO:0006541
GO:0016874
AF-A0A7Y5AH06-F1-model_v4 carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC 6.3.5.5) 0.9727 196 378 GO:0005524
GO:0006541
GO:0016874

Map