F384064

General Info

Members Datasets Scaffolds Average Seq Length
281 173 272 355

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10290185|Ga0070658_102901851
Length 383
Sequence MAKSQQLKAYKMRTLKFLLQKEFRQIFRDKSILRIIFMMPALQLLVLPWAADYEIKNINIAIVDNGHSDYAQKLISKITSSGYFRLDKYTASYNDALHEIENNNADMILQIPPSFEKNLVKENASDLFIAANAINGVKAGLGTSYLQTIIQDFNAEIRTQWIQVPRFSSQTNIDVTYSNWFNPLMNYKFFMVPGILVMLVTMIGSFLAAMNIVREKEIGTIEQINVTPIKKYHFILGKLIPFWVLGLIILSIGLLISYLAYGIVPAGSFITIYIFAACYLLAVLGLGLLISTYSSTQQQAMLFSFFLVMIFVLLSGLYTPISSMPTWAQWITKLNPVSYFIEVMRMVVLKGSTLADISGNIIIVLGFAVGLNAWAVLSYRKRT

Samples

Sample ID Description Type Environment
1 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
2 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
3 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
4 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
5 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
6 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
7 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
8 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
9 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
10 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
21 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
22 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
23 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
24 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
25 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
26 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
27 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
30 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
31 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
36 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
43 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
51 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
52 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
55 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
56 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
62 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
63 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
78 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
79 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
82 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
83 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
84 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
85 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
86 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
120 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
121 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
124 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
125 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
126 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
127 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
128 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
129 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
130 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
131 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
132 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
133 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
136 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
137 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
138 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
139 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
140 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
141 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
142 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
143 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
144 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
145 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
146 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
147 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
148 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
149 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
150 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
151 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
152 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
153 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
166 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
167 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
173 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.8
Metatranscriptomes 0
Isolates 3.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.49
Nodule 1.07
Rhizoplane 1.07
Rhizosphere 92.17
Stem 0
Stem Tuber 0
Unclassified 3.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10000938 3300002459 Bacteria 6495
2 rootH2_10057170 3300003320 Bacteria 4723
3 rootL2_10108591 3300003322 Unclassified 3506
4 rootH1_10062841 3300003323 Bacteria 8655
5 rootH1_10081430 3300003323 Bacteria 10730
6 Ga0055531_10000120 3300003794 Bacteria 87551
7 Ga0065712_10003882 3300005290 Bacteria 3480
8 Ga0065712_10113488 3300005290 Unclassified 1782
9 Ga0070658_10025494 3300005327 Bacteria 4740
10 Ga0070658_10029934 3300005327 Bacteria 4374
11 Ga0070658_10290185 3300005327 Bacteria 1394
12 Ga0070683_100081186 3300005329 Bacteria 3036
13 Ga0070690_100254562 3300005330 Bacteria 1243
14 Ga0070670_100009051 3300005331 Bacteria 8507
15 Ga0070670_100190447 3300005331 Unclassified 1782
16 Ga0070670_100263305 3300005331 Unclassified 1503
17 Ga0068869_100056010 3300005334 Bacteria 2874
18 Ga0068869_100154729 3300005334 Bacteria 1781
19 Ga0068869_100285998 3300005334 Bacteria 1327
20 Ga0070666_10000393 3300005335 Bacteria 27564
21 Ga0068868_100068639 3300005338 Bacteria 2823
22 Ga0070660_100042442 3300005339 Bacteria 3471
23 Ga0070689_100070211 3300005340 Bacteria 2734
24 Ga0070687_100080118 3300005343 Bacteria 1779
25 Ga0070668_100043629 3300005347 Bacteria 3439
26 Ga0070669_100055127 3300005353 Bacteria 2912
27 Ga0070675_100002121 3300005354 Bacteria 14650
28 Ga0070675_100038109 3300005354 Bacteria 3917
29 Ga0070671_100001746 3300005355 Bacteria 16510
30 Ga0070673_100054394 3300005364 Bacteria 3148
31 Ga0070673_100094271 3300005364 Unclassified 2453
32 Ga0070673_100167456 3300005364 Bacteria 1873
33 Ga0070688_100028647 3300005365 Bacteria 3326
34 Ga0070659_100005578 3300005366 Bacteria 9042
35 Ga0070667_100004747 3300005367 Bacteria 11387
36 Ga0070662_100093912 3300005457 Bacteria 2258
37 Ga0070681_10148705 3300005458 Bacteria 2270
38 Ga0068867_100015235 3300005459 Bacteria 5452
39 Ga0068867_100050601 3300005459 Bacteria 3063
40 Ga0068867_100081775 3300005459 Bacteria 2436
41 Ga0068867_100123579 3300005459 Bacteria 2003
42 Ga0068867_100202646 3300005459 Bacteria 1589
43 Ga0070679_100016413 3300005530 Bacteria 7141
44 Ga0070679_100047070 3300005530 Bacteria 4300
45 Ga0070684_100165173 3300005535 Bacteria 2009
46 Ga0070684_100473687 3300005535 Bacteria 1158
47 Ga0068853_100183550 3300005539 Bacteria 1898
48 Ga0068853_100323339 3300005539 Unclassified 1430
49 Ga0070672_100138144 3300005543 Bacteria 2008
50 Ga0070672_100155932 3300005543 Bacteria 1891
51 Ga0070672_100213237 3300005543 Unclassified 1618
52 Ga0070665_100318179 3300005548 Bacteria 1560
53 Ga0068855_100001137 3300005563 Bacteria 32980
54 Ga0070664_100021517 3300005564 Bacteria 5316
55 Ga0070664_100077153 3300005564 Bacteria 2864
56 Ga0068857_100112546 3300005577 Bacteria 2447
57 Ga0068857_100143716 3300005577 Bacteria 2158
58 Ga0068857_100349385 3300005577 Unclassified 1369
59 Ga0068854_100149485 3300005578 Bacteria 1800
60 Ga0068856_100421390 3300005614 Unclassified 1355
61 Ga0068852_100004584 3300005616 Bacteria 9786
62 Ga0068852_100541482 3300005616 Bacteria 1163
63 Ga0068859_100000023 3300005617 Bacteria 221914
64 Ga0068859_100004980 3300005617 Bacteria 13490
65 Ga0068859_100102236 3300005617 Bacteria 2923
66 Ga0068859_100119915 3300005617 Bacteria 2697
67 Ga0068864_100147461 3300005618 Bacteria 2128
68 Ga0068864_100230140 3300005618 Bacteria 1714
69 Ga0068861_100003722 3300005719 Bacteria 10171
70 Ga0068851_10000062 3300005834 Bacteria 60551
71 Ga0068863_100000424 3300005841 Bacteria 42794
72 Ga0068863_100056603 3300005841 Bacteria 3712
73 Ga0068863_100059039 3300005841 Bacteria 3630
74 Ga0068863_100371746 3300005841 Unclassified 1395
75 Ga0068858_100002164 3300005842 Bacteria 19931
76 Ga0068860_100007162 3300005843 Bacteria 11159
77 Ga0068860_100307311 3300005843 Bacteria 1555
78 Ga0068862_100001846 3300005844 Bacteria 19205
79 Ga0081539_10000916 3300005985 Bacteria 55685
80 Ga0075366_10032294 3300006195 Bacteria 3082
81 Ga0097621_100000300 3300006237 Bacteria 33484
82 Ga0097621_100006708 3300006237 Bacteria 8182
83 Ga0097621_100060898 3300006237 Bacteria 3095
84 Ga0097621_100106736 3300006237 Bacteria 2362
85 Ga0068871_100002379 3300006358 Bacteria 12828
86 Ga0068871_100005100 3300006358 Bacteria 9176
87 Ga0068871_100021743 3300006358 Bacteria 4936
88 Ga0068871_100047200 3300006358 Bacteria 3472
89 Ga0097620_100000023 3300006931 Bacteria 221914
90 Ga0097620_100004980 3300006931 Bacteria 13490
91 Ga0097620_100102233 3300006931 Bacteria 2923
92 Ga0097620_100119916 3300006931 Bacteria 2697
93 Ga0099824_1014056 3300006942 Bacteria 8094
94 Ga0099826_10001001 3300006948 Bacteria 15817
95 Ga0105251_10033446 3300009011 Bacteria 2553
96 Ga0111539_10030939 3300009094 Bacteria 6504
97 Ga0111539_10149167 3300009094 Bacteria 2738
98 Ga0114129_10033659 3300009147 Bacteria 7239
99 Ga0105241_10000527 3300009174 Bacteria 28775
100 Ga0105241_10162868 3300009174 Bacteria 1835
101 Ga0105242_10032233 3300009176 Bacteria 4190
102 Ga0105242_10165940 3300009176 Bacteria 1937
103 Ga0105249_10005625 3300009553 Bacteria 10842
104 Ga0105249_10044136 3300009553 Bacteria 4055
105 Ga0105249_10151544 3300009553 Unclassified 2233
106 Ga0105239_10080824 3300010375 Bacteria 3576
107 Ga0157371_10000451 3300013102 Bacteria 50405
108 Ga0157371_10033462 3300013102 Bacteria 3693
109 Ga0157370_10000263 3300013104 Bacteria 66700
110 Ga0157370_10000473 3300013104 Bacteria 50187
111 Ga0157370_10100260 3300013104 Bacteria 2713
112 Ga0157378_10004753 3300013297 Bacteria 11902
113 Ga0157378_10274732 3300013297 Bacteria 1622
114 Ga0157378_10353758 3300013297 Bacteria 1435
115 Ga0163162_10003718 3300013306 Bacteria 14620
116 Ga0163162_10003755 3300013306 Bacteria 14547
117 Ga0163162_10015323 3300013306 Bacteria 7489
118 Ga0163162_10028008 3300013306 Bacteria 5573
119 Ga0163162_10374553 3300013306 Bacteria 1557
120 Ga0157372_10005009 3300013307 Bacteria 14072
121 Ga0157372_10037698 3300013307 Bacteria 5333
122 Ga0157372_10071786 3300013307 Bacteria 3900
123 Ga0157372_10107807 3300013307 Bacteria 3188
124 Ga0157372_10210790 3300013307 Bacteria 2252
125 Ga0157372_10229789 3300013307 Bacteria 2150
126 Ga0157375_10000453 3300013308 Bacteria 37144
127 Ga0157375_10038326 3300013308 Bacteria 4602
128 Ga0157375_10202110 3300013308 Bacteria 2143
129 Ga0163163_10000914 3300014325 Bacteria 25037
130 Ga0163163_10073538 3300014325 Bacteria 3409
131 Ga0163163_10213390 3300014325 Unclassified 1979
132 Ga0157380_10077662 3300014326 Bacteria 2707
133 Ga0157380_10114089 3300014326 Bacteria 2276
134 Ga0182008_10081566 3300014497 Bacteria 1592
135 Ga0157377_10003456 3300014745 Bacteria 7156
136 Ga0157379_10009821 3300014968 Bacteria 8341
137 Ga0157376_10001590 3300014969 Bacteria 15022
138 Ga0182007_10024245 3300015262 Bacteria 2124
139 Ga0163161_10030902 3300017792 Bacteria 3813
140 Ga0163161_10161377 3300017792 Bacteria 1709
141 Ga0209436_104953 3300025208 Bacteria 3185
142 Ga0207426_1000135 3300025302 Bacteria 202216
143 Ga0209257_1000007 3300025304 Bacteria 1564415
144 Ga0207697_10043459 3300025315 Bacteria 1848
145 Ga0207680_10000373 3300025903 Bacteria 21488
146 Ga0207645_10005100 3300025907 Bacteria 9614
147 Ga0207645_10117437 3300025907 Bacteria 1725
148 Ga0207705_10018203 3300025909 Bacteria 5022
149 Ga0207705_10221724 3300025909 Bacteria 1437
150 Ga0207654_10006264 3300025911 Bacteria 5981
151 Ga0207657_10047393 3300025919 Bacteria 3758
152 Ga0207652_10003426 3300025921 Bacteria 13089
153 Ga0207681_10049678 3300025923 Bacteria 2836
154 Ga0207681_10319169 3300025923 Bacteria 1235
155 Ga0207650_10037232 3300025925 Bacteria 3544
156 Ga0207650_10051606 3300025925 Bacteria 3044
157 Ga0207650_10053777 3300025925 Bacteria 2985
158 Ga0207650_10064095 3300025925 Bacteria 2750
159 Ga0207650_10259536 3300025925 Bacteria 1409
160 Ga0207659_10035118 3300025926 Bacteria 3463
161 Ga0207659_10133487 3300025926 Bacteria 1919
162 Ga0207659_10165864 3300025926 Bacteria 1738
163 Ga0207644_10042652 3300025931 Bacteria 3216
164 Ga0207644_10237824 3300025931 Unclassified 1449
165 Ga0207706_10006556 3300025933 Bacteria 10783
166 Ga0207706_10038970 3300025933 Bacteria 4215
167 Ga0207686_10090973 3300025934 Bacteria 2014
168 Ga0207670_10036129 3300025936 Bacteria 3210
169 Ga0207704_10091662 3300025938 Unclassified 1998
170 Ga0207691_10044007 3300025940 Bacteria 4112
171 Ga0207691_10085247 3300025940 Bacteria 2835
172 Ga0207689_10001785 3300025942 Bacteria 20329
173 Ga0207689_10062686 3300025942 Bacteria 3058
174 Ga0207689_10114870 3300025942 Bacteria 2213
175 Ga0207689_10137553 3300025942 Unclassified 2012
176 Ga0207661_10050259 3300025944 Bacteria 3321
177 Ga0207661_10402893 3300025944 Unclassified 1241
178 Ga0207679_10213484 3300025945 Unclassified 1620
179 Ga0207651_10103043 3300025960 Unclassified 2123
180 Ga0207640_10287908 3300025981 Unclassified 1294
181 Ga0207658_10018743 3300025986 Bacteria 4784
182 Ga0207677_10012528 3300026023 Bacteria 4879
183 Ga0207703_10001211 3300026035 Bacteria 24154
184 Ga0207639_10140100 3300026041 Bacteria 2014
185 Ga0207702_10358154 3300026078 Unclassified 1398
186 Ga0207641_10000250 3300026088 Bacteria 68774
187 Ga0207641_10021101 3300026088 Bacteria 5354
188 Ga0207641_10029856 3300026088 Bacteria 4510
189 Ga0207641_10253339 3300026088 Unclassified 1645
190 Ga0207648_10001472 3300026089 Bacteria 25920
191 Ga0207648_10032257 3300026089 Bacteria 4626
192 Ga0207648_10041412 3300026089 Bacteria 4044
193 Ga0207648_10057037 3300026089 Bacteria 3408
194 Ga0207648_10084296 3300026089 Bacteria 2772
195 Ga0207648_10102358 3300026089 Bacteria 2510
196 Ga0207648_10199880 3300026089 Unclassified 1773
197 Ga0207676_10056457 3300026095 Bacteria 3087
198 Ga0207674_10006437 3300026116 Bacteria 13808
199 Ga0207674_10076047 3300026116 Bacteria 3367
200 Ga0207674_10369971 3300026116 Bacteria 1385
201 Ga0207675_100000326 3300026118 Bacteria 45358
202 Ga0207675_100034863 3300026118 Bacteria 4692
203 Ga0207698_10356096 3300026142 Bacteria 1384
204 Ga0209489_114732 3300027361 Bacteria 5278
205 Ga0207428_10099344 3300027907 Unclassified 2250
206 Ga0268265_10075422 3300028380 Bacteria 2641
207 Ga0268264_10004794 3300028381 Bacteria 11475
208 Ga0316177_1098809 3300030731 Bacteria 5689
209 Ga0316176_1050619 3300030732 Bacteria 7785
210 Ga0316183_1012319 3300030742 Bacteria 42053
211 Ga0316181_1010125 3300030744 Bacteria 44599
212 Ga0316182_1406831 3300030745 Bacteria 1996
213 Ga0265327_10000152 3300031251 Bacteria 149065
214 Ga0265327_10000316 3300031251 Bacteria 92271
215 Ga0265327_10091655 3300031251 Bacteria 1481
216 Ga0307513_10102673 3300031456 Bacteria 2877
217 Ga0307509_10007660 3300031507 Bacteria 14033
218 Ga0307509_10093603 3300031507 Bacteria 3066
219 Ga0307412_10085373 3300031911 Bacteria 2194
220 Ga0307414_10142632 3300032004 Bacteria 1878
221 Ga0395899_0027539 3300037312 Bacteria 4283
222 Ga0395900_0170934 3300037418 Bacteria 2213
223 Ga0395898_0007181 3300037466 Bacteria 11827
224 Ga0395901_0014638 3300038443 Bacteria 7971
225 Ga0439465_0042815 3300041413 Bacteria 1468
226 Ga0451577_0008518 3300042876 Bacteria 9975
227 Ga0451577_0060635 3300042876 Bacteria 3373
228 Ga0451577_0324457 3300042876 Unclassified 1396
229 Ga0466972_0000019 3300044658 Bacteria 198523
230 Ga0453683_0036271 3300044673 Bacteria 3103
231 Ga0453684_0001177 3300044712 Bacteria 81167
232 Ga0453684_0344342 3300044712 Unclassified 1682
233 Ga0451576_0024805 3300045051 Bacteria 6472
234 Ga0451576_0051766 3300045051 Bacteria 4305
235 Ga0451576_0427465 3300045051 Bacteria 1390
236 Ga0495627_000025 3300046453 Bacteria 248825
237 Ga0495585_0035651 3300046492 Bacteria 2810
238 Ga0495630_0053920 3300046517 Bacteria 3012
239 Ga0495654_0000099 3300046530 Bacteria 98758
240 Ga0495633_0000108 3300046558 Bacteria 111235
241 Ga0495668_0001412 3300046616 Bacteria 23403
242 Ga0495635_0155269 3300046663 Unclassified 1558
243 Ga0495589_0091873 3300046794 Bacteria 1474
244 Ga0495686_0015579 3300047472 Bacteria 5185
245 Ga0496101_0170642 3300048904 Unclassified 1672
246 Ga0496104_0265560 3300048907 Unclassified 1629
247 Ga0496114_0174127 3300048917 Bacteria 1877
248 Ga0501290_001035 3300049513 Unclassified 3976
249 Ga0501032_0002494 3300049569 Bacteria 14369
250 Ga0501032_0068925 3300049569 Bacteria 2360
251 Ga0501034_0000410 3300049571 Bacteria 72148
252 Ga0501034_0001945 3300049571 Bacteria 26170
253 Ga0501034_0006827 3300049571 Bacteria 12211
254 Ga0501039_0019318 3300049575 Bacteria 5224
255 Ga0501043_0024649 3300049579 Bacteria 4718
256 Ga0501043_0055286 3300049579 Bacteria 3118
257 Ga0501046_0095850 3300049580 Bacteria 2279
258 Ga0501047_0018679 3300049581 Bacteria 6648
259 Ga0501069_0038153 3300049585 Bacteria 2652
260 Ga0501073_0008802 3300049589 Bacteria 7464
261 Ga0501074_0004884 3300049590 Bacteria 9613
262 Ga0501257_004829 3300049686 Unclassified 2950
263 Ga0501259_004655 3300049688 Bacteria 2175
264 Ga0501080_0067718 3300049742 Bacteria 3321
265 Ga0501044_0003040 3300049823 Bacteria 18988
266 nmdc:mga05p37_63898_c1 3300050507 Bacteria 4530
267 nmdc:mga06r32_299285_c1 3300050510 Bacteria 1595
268 nmdc:mga06r32_49565_c1 3300050510 Bacteria 4016
269 nmdc:mga08y16_135843_c1 3300050511 Bacteria 2556
270 nmdc:mga08y16_44906_c1 3300050511 Unclassified 4630
271 Ga0500604_0011588 3300053151 Bacteria 2370
272 Ga0500622_0000010 3300053156 Bacteria 398804

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300031507 Ga0307509_10007660 Ga0307509_100076606 308
2 3300049569 Ga0501032_0068925 Ga0501032_0068925_119_1156 310
3 3300049571 Ga0501034_0000410 Ga0501034_0000410_28736_29755 311
4 3300049579 Ga0501043_0024649 Ga0501043_0024649_172_1209 311
5 3300046663 Ga0495635_0155269 Ga0495635_0155269_379_1416 313
6 3300005331 Ga0070670_100190447 Ga0070670_1001904472 315
7 3300005334 Ga0068869_100285998 Ga0068869_1002859981 315
8 3300005340 Ga0070689_100070211 Ga0070689_1000702112 315
9 3300005343 Ga0070687_100080118 Ga0070687_1000801182 315
10 3300005347 Ga0070668_100043629 Ga0070668_1000436293 315
11 3300005364 Ga0070673_100167456 Ga0070673_1001674562 315
12 3300005365 Ga0070688_100028647 Ga0070688_1000286473 315
13 3300005457 Ga0070662_100093912 Ga0070662_1000939123 315
14 3300005459 Ga0068867_100202646 Ga0068867_1002026462 315
15 3300005543 Ga0070672_100155932 Ga0070672_1001559322 315
16 3300025315 Ga0207697_10043459 Ga0207697_100434592 315
17 3300025925 Ga0207650_10053777 Ga0207650_100537773 315
18 3300009176 Ga0105242_10165940 Ga0105242_101659401 316
19 3300009553 Ga0105249_10005625 Ga0105249_100056259 317
20 3300049513 Ga0501290_001035 Ga0501290_001035_1335_2378 317
21 3300049686 Ga0501257_004829 Ga0501257_004829_1384_2427 317
22 3300049688 Ga0501259_004655 Ga0501259_004655_573_1616 317
23 3300050510 nmdc:mga06r32_299285_c1 nmdc:mga06r32_299285_c1_190_1227 317
24 3300005329 Ga0070683_100081186 Ga0070683_1000811862 318
25 3300005564 Ga0070664_100077153 Ga0070664_1000771533 318
26 3300025944 Ga0207661_10050259 Ga0207661_100502593 318
27 3300042876 Ga0451577_0060635 Ga0451577_0060635_904_1953 318
28 3300044673 Ga0453683_0036271 Ga0453683_0036271_536_1585 318
29 3300045051 Ga0451576_0024805 Ga0451576_0024805_666_1715 318
30 3300005339 Ga0070660_100042442 Ga0070660_1000424423 319
31 3300005458 Ga0070681_10148705 Ga0070681_101487052 319
32 3300005530 Ga0070679_100016413 Ga0070679_1000164136 319
33 3300005614 Ga0068856_100421390 Ga0068856_1004213901 319
34 3300005616 Ga0068852_100004584 Ga0068852_1000045849 319
35 3300013102 Ga0157371_10033462 Ga0157371_100334622 319
36 3300025909 Ga0207705_10018203 Ga0207705_100182032 319
37 3300025919 Ga0207657_10047393 Ga0207657_100473933 319
38 3300025921 Ga0207652_10003426 Ga0207652_100034267 319
39 3300026078 Ga0207702_10358154 Ga0207702_103581542 319
40 3300046558 Ga0495633_0000108 Ga0495633_0000108_102629_103681 319
41 3300048917 Ga0496114_0174127 Ga0496114_0174127_21_1067 319
42 3300049571 Ga0501034_0006827 Ga0501034_0006827_2497_3552 319
43 3300013307 Ga0157372_10107807 Ga0157372_101078073 321
44 3300003323 rootH1_10081430 rootH1_100814307 330
45 3300014325 Ga0163163_10213390 Ga0163163_102133902 331
46 3300045051 Ga0451576_0427465 Ga0451576_0427465_225_1346 333
47 iso_pu_bacteria 2818991460 2819678496 335
48 iso_pu_bacteria 2929177148 2929180754 335
49 iso_pu_bacteria 2945977869 2945983150 335
50 iso_pu_bacteria 2946013367 2946017458 335
51 3300005354 Ga0070675_100038109 Ga0070675_1000381093 336
52 3300009094 Ga0111539_10030939 Ga0111539_100309394 336
53 3300025926 Ga0207659_10035118 Ga0207659_100351183 336
54 3300027907 Ga0207428_10099344 Ga0207428_100993443 336
55 3300050511 nmdc:mga08y16_44906_c1 nmdc:mga08y16_44906_c1_528_1646 336
56 3300005290 Ga0065712_10113488 Ga0065712_101134882 337
57 3300049589 Ga0501073_0008802 Ga0501073_0008802_5073_6191 337
58 3300049590 Ga0501074_0004884 Ga0501074_0004884_6865_7983 337
59 3300005618 Ga0068864_100230140 Ga0068864_1002301402 338
60 3300005841 Ga0068863_100059039 Ga0068863_1000590394 338
61 3300013297 Ga0157378_10274732 Ga0157378_102747322 338
62 3300013307 Ga0157372_10210790 Ga0157372_102107902 338
63 3300025208 Ga0209436_104953 Ga0209436_1049533 338
64 3300025302 Ga0207426_1000135 Ga0207426_100013599 338
65 3300026088 Ga0207641_10029856 Ga0207641_100298564 338
66 3300049569 Ga0501032_0002494 Ga0501032_0002494_1185_2303 338
67 3300049571 Ga0501034_0001945 Ga0501034_0001945_9750_10868 338
68 3300049575 Ga0501039_0019318 Ga0501039_0019318_2646_3764 338
69 3300049579 Ga0501043_0055286 Ga0501043_0055286_1199_2317 338
70 3300049580 Ga0501046_0095850 Ga0501046_0095850_1006_2124 338
71 3300049581 Ga0501047_0018679 Ga0501047_0018679_231_1349 338
72 3300049823 Ga0501044_0003040 Ga0501044_0003040_15165_16283 338
73 iso_pu_bacteria 2585428115 2587942141 338
74 iso_pu_bacteria 2958458903 2958461667 338
75 3300003320 rootH2_10057170 rootH2_100571705 339
76 3300003323 rootH1_10062841 rootH1_100628414 339
77 3300005366 Ga0070659_100005578 Ga0070659_1000055787 339
78 3300005563 Ga0068855_100001137 Ga0068855_1000011376 339
79 3300005577 Ga0068857_100112546 Ga0068857_1001125463 339
80 3300009147 Ga0114129_10033659 Ga0114129_100336593 339
81 3300009553 Ga0105249_10044136 Ga0105249_100441364 339
82 3300013102 Ga0157371_10000451 Ga0157371_100004511 339
83 3300013104 Ga0157370_10000473 Ga0157370_1000047334 339
84 3300013307 Ga0157372_10005009 Ga0157372_100050093 339
85 3300014326 Ga0157380_10077662 Ga0157380_100776622 339
86 3300037312 Ga0395899_0027539 Ga0395899_0027539_50_1168 339
87 3300037466 Ga0395898_0007181 Ga0395898_0007181_9413_10531 339
88 3300038443 Ga0395901_0014638 Ga0395901_0014638_6762_7880 339
89 3300041413 Ga0439465_0042815 Ga0439465_0042815_336_1454 339
90 3300046616 Ga0495668_0001412 Ga0495668_0001412_20454_21572 339
91 3300050507 nmdc:mga05p37_63898_c1 nmdc:mga05p37_63898_c1_1168_2286 339
92 3300050510 nmdc:mga06r32_49565_c1 nmdc:mga06r32_49565_c1_530_1648 339
93 iso_pu_bacteria 2965320100 2965321637 339
94 3300005327 Ga0070658_10029934 Ga0070658_100299341 340
95 3300013104 Ga0157370_10100260 Ga0157370_101002602 340
96 3300053156 Ga0500622_0000010 Ga0500622_0000010_250729_251841 340
97 iso_pu_bacteria 2896317667 2896320217 340
98 iso_pu_bacteria 2910245624 2910247159 340
99 3300005334 Ga0068869_100154729 Ga0068869_1001547291 341
100 3300005338 Ga0068868_100068639 Ga0068868_1000686392 341
101 3300005364 Ga0070673_100054394 Ga0070673_1000543942 341
102 3300005459 Ga0068867_100050601 Ga0068867_1000506014 341
103 3300005459 Ga0068867_100123579 Ga0068867_1001235792 341
104 3300005543 Ga0070672_100213237 Ga0070672_1002132372 341
105 3300006195 Ga0075366_10032294 Ga0075366_100322943 341
106 3300006358 Ga0068871_100047200 Ga0068871_1000472004 341
107 3300009174 Ga0105241_10162868 Ga0105241_101628682 341
108 3300013104 Ga0157370_10000263 Ga0157370_1000026379 341
109 3300013307 Ga0157372_10071786 Ga0157372_100717864 341
110 3300013308 Ga0157375_10038326 Ga0157375_100383262 341
111 3300017792 Ga0163161_10161377 Ga0163161_101613771 341
112 3300025926 Ga0207659_10165864 Ga0207659_101658642 341
113 3300025931 Ga0207644_10237824 Ga0207644_102378241 341
114 3300025933 Ga0207706_10006556 Ga0207706_100065566 341
115 3300025938 Ga0207704_10091662 Ga0207704_100916622 341
116 3300025940 Ga0207691_10085247 Ga0207691_100852474 341
117 3300025944 Ga0207661_10402893 Ga0207661_104028931 341
118 3300025945 Ga0207679_10213484 Ga0207679_102134842 341
119 3300025981 Ga0207640_10287908 Ga0207640_102879081 341
120 3300026089 Ga0207648_10001472 Ga0207648_1000147227 341
121 3300026089 Ga0207648_10041412 Ga0207648_100414122 341
122 3300026089 Ga0207648_10199880 Ga0207648_101998802 341
123 3300031456 Ga0307513_10102673 Ga0307513_101026732 341
124 3300031507 Ga0307509_10093603 Ga0307509_100936032 341
125 3300049742 Ga0501080_0067718 Ga0501080_0067718_2153_3274 341
126 3300003794 Ga0055531_10000120 Ga0055531_1000012049 342
127 3300005327 Ga0070658_10025494 Ga0070658_100254942 342
128 3300005334 Ga0068869_100056010 Ga0068869_1000560102 342
129 3300005335 Ga0070666_10000393 Ga0070666_1000039324 342
130 3300005364 Ga0070673_100094271 Ga0070673_1000942712 342
131 3300005535 Ga0070684_100165173 Ga0070684_1001651732 342
132 3300005539 Ga0068853_100183550 Ga0068853_1001835502 342
133 3300005543 Ga0070672_100138144 Ga0070672_1001381442 342
134 3300005548 Ga0070665_100318179 Ga0070665_1003181792 342
135 3300005577 Ga0068857_100143716 Ga0068857_1001437161 342
136 3300005617 Ga0068859_100000023 Ga0068859_10000002374 342
137 3300005841 Ga0068863_100000424 Ga0068863_10000042413 342
138 3300005841 Ga0068863_100371746 Ga0068863_1003717461 342
139 3300005842 Ga0068858_100002164 Ga0068858_10000216422 342
140 3300005843 Ga0068860_100007162 Ga0068860_1000071624 342
141 3300005843 Ga0068860_100307311 Ga0068860_1003073112 342
142 3300006237 Ga0097621_100006708 Ga0097621_1000067087 342
143 3300006237 Ga0097621_100060898 Ga0097621_1000608982 342
144 3300006237 Ga0097621_100106736 Ga0097621_1001067361 342
145 3300006358 Ga0068871_100002379 Ga0068871_1000023796 342
146 3300006931 Ga0097620_100000023 Ga0097620_10000002374 342
147 3300006942 Ga0099824_1014056 Ga0099824_10140566 342
148 3300006948 Ga0099826_10001001 Ga0099826_100010017 342
149 3300009011 Ga0105251_10033446 Ga0105251_100334463 342
150 3300009094 Ga0111539_10149167 Ga0111539_101491672 342
151 3300009174 Ga0105241_10000527 Ga0105241_100005279 342
152 3300009176 Ga0105242_10032233 Ga0105242_100322335 342
153 3300010375 Ga0105239_10080824 Ga0105239_100808244 342
154 3300013306 Ga0163162_10003718 Ga0163162_100037185 342
155 3300013306 Ga0163162_10015323 Ga0163162_100153238 342
156 3300013306 Ga0163162_10028008 Ga0163162_100280083 342
157 3300013308 Ga0157375_10202110 Ga0157375_102021101 342
158 3300014325 Ga0163163_10073538 Ga0163163_100735384 342
159 3300014326 Ga0157380_10114089 Ga0157380_101140892 342
160 3300014497 Ga0182008_10081566 Ga0182008_100815662 342
161 3300014969 Ga0157376_10001590 Ga0157376_100015902 342
162 3300015262 Ga0182007_10024245 Ga0182007_100242452 342
163 3300025304 Ga0209257_1000007 Ga0209257_10000071030 342
164 3300025903 Ga0207680_10000373 Ga0207680_1000037311 342
165 3300025907 Ga0207645_10005100 Ga0207645_100051006 342
166 3300025907 Ga0207645_10117437 Ga0207645_101174372 342
167 3300025911 Ga0207654_10006264 Ga0207654_100062645 342
168 3300025923 Ga0207681_10049678 Ga0207681_100496784 342
169 3300025925 Ga0207650_10064095 Ga0207650_100640953 342
170 3300025926 Ga0207659_10133487 Ga0207659_101334872 342
171 3300025934 Ga0207686_10090973 Ga0207686_100909733 342
172 3300025940 Ga0207691_10044007 Ga0207691_100440074 342
173 3300025942 Ga0207689_10001785 Ga0207689_1000178516 342
174 3300025942 Ga0207689_10062686 Ga0207689_100626861 342
175 3300025960 Ga0207651_10103043 Ga0207651_101030431 342
176 3300026023 Ga0207677_10012528 Ga0207677_100125285 342
177 3300026035 Ga0207703_10001211 Ga0207703_1000121118 342
178 3300026041 Ga0207639_10140100 Ga0207639_101401001 342
179 3300026088 Ga0207641_10000250 Ga0207641_1000025031 342
180 3300026088 Ga0207641_10253339 Ga0207641_102533391 342
181 3300026089 Ga0207648_10032257 Ga0207648_100322575 342
182 3300026089 Ga0207648_10084296 Ga0207648_100842962 342
183 3300026116 Ga0207674_10076047 Ga0207674_100760471 342
184 3300026118 Ga0207675_100034863 Ga0207675_1000348635 342
185 3300027361 Ga0209489_114732 Ga0209489_1147325 342
186 3300028381 Ga0268264_10004794 Ga0268264_100047944 342
187 3300031911 Ga0307412_10085373 Ga0307412_100853731 342
188 3300044658 Ga0466972_0000019 Ga0466972_0000019_168413_169528 342
189 3300046453 Ga0495627_000025 Ga0495627_000025_227710_228831 342
190 3300046492 Ga0495585_0035651 Ga0495585_0035651_270_1394 342
191 3300046530 Ga0495654_0000099 Ga0495654_0000099_9074_10195 342
192 3300046794 Ga0495589_0091873 Ga0495589_0091873_63_1187 342
193 3300047472 Ga0495686_0015579 Ga0495686_0015579_1639_2760 342
194 3300050511 nmdc:mga08y16_135843_c1 nmdc:mga08y16_135843_c1_300_1424 342
195 3300053151 Ga0500604_0011588 Ga0500604_0011588_784_1902 342
196 3300005617 Ga0068859_100004980 Ga0068859_1000049804 343
197 3300006931 Ga0097620_100004980 Ga0097620_10000498011 343
198 3300025925 Ga0207650_10051606 Ga0207650_100516062 343
199 3300031251 Ga0265327_10000316 Ga0265327_1000031686 343
200 3300032004 Ga0307414_10142632 Ga0307414_101426322 343
201 3300037418 Ga0395900_0170934 Ga0395900_0170934_639_1757 343
202 3300002459 JGI24751J29686_10000938 JGI24751J29686_100009388 344
203 3300003322 rootL2_10108591 rootL2_101085914 344
204 3300005290 Ga0065712_10003882 Ga0065712_100038821 344
205 3300005327 Ga0070658_10290185 Ga0070658_102901851 344
206 3300005330 Ga0070690_100254562 Ga0070690_1002545621 344
207 3300005331 Ga0070670_100009051 Ga0070670_1000090518 344
208 3300005331 Ga0070670_100263305 Ga0070670_1002633052 344
209 3300005353 Ga0070669_100055127 Ga0070669_1000551274 344
210 3300005354 Ga0070675_100002121 Ga0070675_1000021213 344
211 3300005355 Ga0070671_100001746 Ga0070671_10000174612 344
212 3300005367 Ga0070667_100004747 Ga0070667_10000474710 344
213 3300005459 Ga0068867_100015235 Ga0068867_1000152359 344
214 3300005459 Ga0068867_100081775 Ga0068867_1000817752 344
215 3300005530 Ga0070679_100047070 Ga0070679_1000470703 344
216 3300005535 Ga0070684_100473687 Ga0070684_1004736871 344
217 3300005539 Ga0068853_100323339 Ga0068853_1003233392 344
218 3300005564 Ga0070664_100021517 Ga0070664_1000215176 344
219 3300005577 Ga0068857_100349385 Ga0068857_1003493852 344
220 3300005578 Ga0068854_100149485 Ga0068854_1001494852 344
221 3300005616 Ga0068852_100541482 Ga0068852_1005414821 344
222 3300005617 Ga0068859_100102236 Ga0068859_1001022363 344
223 3300005617 Ga0068859_100119915 Ga0068859_1001199154 344
224 3300005618 Ga0068864_100147461 Ga0068864_1001474613 344
225 3300005719 Ga0068861_100003722 Ga0068861_10000372211 344
226 3300005834 Ga0068851_10000062 Ga0068851_100000622 344
227 3300005841 Ga0068863_100056603 Ga0068863_1000566032 344
228 3300005844 Ga0068862_100001846 Ga0068862_10000184620 344
229 3300005985 Ga0081539_10000916 Ga0081539_1000091649 344
230 3300006237 Ga0097621_100000300 Ga0097621_10000030031 344
231 3300006358 Ga0068871_100005100 Ga0068871_1000051004 344
232 3300006358 Ga0068871_100021743 Ga0068871_1000217434 344
233 3300006931 Ga0097620_100102233 Ga0097620_1001022333 344
234 3300006931 Ga0097620_100119916 Ga0097620_1001199162 344
235 3300009553 Ga0105249_10151544 Ga0105249_101515441 344
236 3300013297 Ga0157378_10004753 Ga0157378_100047537 344
237 3300013297 Ga0157378_10353758 Ga0157378_103537581 344
238 3300013306 Ga0163162_10003755 Ga0163162_1000375513 344
239 3300013306 Ga0163162_10374553 Ga0163162_103745532 344
240 3300013307 Ga0157372_10037698 Ga0157372_100376982 344
241 3300013307 Ga0157372_10229789 Ga0157372_102297892 344
242 3300013308 Ga0157375_10000453 Ga0157375_1000045331 344
243 3300014325 Ga0163163_10000914 Ga0163163_1000091421 344
244 3300014745 Ga0157377_10003456 Ga0157377_100034569 344
245 3300014968 Ga0157379_10009821 Ga0157379_100098218 344
246 3300017792 Ga0163161_10030902 Ga0163161_100309024 344
247 3300025909 Ga0207705_10221724 Ga0207705_102217242 344
248 3300025923 Ga0207681_10319169 Ga0207681_103191691 344
249 3300025925 Ga0207650_10037232 Ga0207650_100372323 344
250 3300025925 Ga0207650_10259536 Ga0207650_102595362 344
251 3300025931 Ga0207644_10042652 Ga0207644_100426522 344
252 3300025933 Ga0207706_10038970 Ga0207706_100389704 344
253 3300025936 Ga0207670_10036129 Ga0207670_100361294 344
254 3300025942 Ga0207689_10114870 Ga0207689_101148702 344
255 3300025942 Ga0207689_10137553 Ga0207689_101375532 344
256 3300025986 Ga0207658_10018743 Ga0207658_100187433 344
257 3300026088 Ga0207641_10021101 Ga0207641_100211019 344
258 3300026089 Ga0207648_10057037 Ga0207648_100570373 344
259 3300026089 Ga0207648_10102358 Ga0207648_101023582 344
260 3300026095 Ga0207676_10056457 Ga0207676_100564573 344
261 3300026116 Ga0207674_10006437 Ga0207674_100064373 344
262 3300026116 Ga0207674_10369971 Ga0207674_103699711 344
263 3300026118 Ga0207675_100000326 Ga0207675_10000032630 344
264 3300026142 Ga0207698_10356096 Ga0207698_103560962 344
265 3300028380 Ga0268265_10075422 Ga0268265_100754222 344
266 3300030731 Ga0316177_1098809 Ga0316177_10988092 344
267 3300030732 Ga0316176_1050619 Ga0316176_10506196 344
268 3300030742 Ga0316183_1012319 Ga0316183_10123197 344
269 3300030744 Ga0316181_1010125 Ga0316181_10101257 344
270 3300030745 Ga0316182_1406831 Ga0316182_14068312 344
271 3300031251 Ga0265327_10000152 Ga0265327_10000152122 344
272 3300031251 Ga0265327_10091655 Ga0265327_100916552 344
273 3300042876 Ga0451577_0008518 Ga0451577_0008518_1769_2887 344
274 3300042876 Ga0451577_0324457 Ga0451577_0324457_81_1199 344
275 3300044712 Ga0453684_0001177 Ga0453684_0001177_3704_4822 344
276 3300044712 Ga0453684_0344342 Ga0453684_0344342_148_1266 344
277 3300045051 Ga0451576_0051766 Ga0451576_0051766_2919_4037 344
278 3300046517 Ga0495630_0053920 Ga0495630_0053920_1214_2350 344
279 3300048904 Ga0496101_0170642 Ga0496101_0170642_32_1153 344
280 3300048907 Ga0496104_0265560 Ga0496104_0265560_286_1407 344
281 3300049585 Ga0501069_0038153 Ga0501069_0038153_1144_2262 344

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12698

ABC2_membrane_3

ABC-2 family transporter protein

30

377

0.92

PF01061

ABC2_membrane

ABC-2 type transporter

146

349

0.9

PF12679

ABC2_membrane_2

ABC-2 family transporter protein

17

383

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cni-assembly1.cif.gz_A-2 crystal structure of a domain of a putative abc type-2 transporter from thermotoga maritima msb8 0.7473 48 154
1rnl-assembly1.cif.gz_A the nitrate/nitrite response regulator protein narl from narl 0.7093 46 97
1a04-assembly2.cif.gz_B the structure of the nitrate/nitrite response regulator protein narl in the monoclinic c2 crystal form 0.7034 46 97
3s9n-assembly2.cif.gz_D-3 complex between transferrin receptor 1 and transferrin with iron in the n-lobe, room temperature 0.6921 46 98
3f6c-assembly3.cif.gz_B crystal structure of n-terminal domain of positive transcription regulator evga from escherichia coli 0.6851 47 97
ID Description Score Start End Superfamily
af_P37624_579_712_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8576 44 172 3.40.1710.10
af_P0AFP9_40_168_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8502 40 172 3.40.1710.10
af_P0AFP9_40_168_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8322 40 172 3.40.1710.10
af_P0AFQ2_47_201_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8139 46 196 3.40.1710.10
af_P37624_579_712_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8109 44 172 3.40.1710.10
ID Description Score Start End GO Terms
AF-A0A3M1GD03-F1-model_v4 ABC transporter permease 0.9265 44 120 GO:0016020
GO:0140359
AF-A0A2V8X1A3-F1-model_v4 ABC transporter ATP-binding protein 0.8756 41 152 GO:0005524
GO:0005886
GO:0140359
AF-A0A7C5IRM2-F1-model_v4 ABC transporter permease 0.8746 2 269 GO:0005886
GO:0140359
AF-A0A2N0LF20-F1-model_v4 Transport permease protein 0.8489 178 342 GO:0043190
GO:0140359
AF-A0A7C5IRM2-F1-model_v4 ABC transporter permease 0.8395 2 269 GO:0005886
GO:0140359

Feature Viewer

pLDDT pTM Quality
70.02 0.57 Medium
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Predicted Structure (AlphaFold2)

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