F383945

General Info

Members Datasets Scaffolds Average Seq Length
280 162 270 256

Family's Representative Sequence

Representative Sequence 3300050493|nmdc:mga0k408_189056_c1|nmdc:mga0k408_189056_c1_28_861
Length 277
Sequence MNELDELYQEDREETPPPHPRILSLANQKGGVGKTTTAINLGTALAAIGERVLIVDLDPQGNASTGIGVHAADRLRSTYDILVDQASLADCVMPTRIPGLDLVPATVDLSGAEVELVSVESRTDRLRNALARETAYDICFIDCPPSLGLLTLNAMTAADTLLVPLQCEFFALEGLSQLLKTVELVQQRFNSDLGIIGVALTMFDRRNRLTDQVAEDVRSCLGNLVFDATIPRNVRLSEAPSHGLPALIYDHACAGSRAYMALARELIVRLPEQRKAA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
3 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
4 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
5 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
6 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
7 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
8 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
9 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
10 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
11 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
12 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
13 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
37 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
42 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
81 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
86 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
87 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
88 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
91 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
92 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
93 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
94 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
95 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
96 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
97 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
98 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
99 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
100 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
101 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
102 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
103 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
104 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
105 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
106 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
107 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
108 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
111 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
112 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
113 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
118 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
123 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
126 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
127 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
128 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
136 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
137 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
138 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
139 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
140 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
141 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
142 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
143 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
144 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
145 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
146 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
147 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
148 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
149 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
150 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
151 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
152 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
153 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
154 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
155 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
156 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
157 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
158 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
159 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
160 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
161 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
162 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.43
Metatranscriptomes 0
Isolates 3.57

Biome Distribution

Category Percentage (%)
Aerial Root 0.71
Bulb 0
Endosphere 20.36
Nodule 1.07
Rhizoplane 5.71
Rhizosphere 61.43
Stem 0
Stem Tuber 0
Unclassified 10.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1836750 2162886007 Bacteria 5021
2 SwRhRL2b_contig_3198045 2162886007 Bacteria 1173
3 JGI24751J29686_10000270 3300002459 Bacteria 20156
4 Ga0055530_10040498 3300003791 Bacteria 1143
5 Ga0065704_10006737 3300005289 Bacteria 2467
6 Ga0065704_10070157 3300005289 Bacteria 211668
7 Ga0065704_10072701 3300005289 Bacteria 8128
8 Ga0065707_10083963 3300005295 Bacteria 7890
9 Ga0070658_10000811 3300005327 Bacteria 26743
10 Ga0070666_10027349 3300005335 Bacteria 3734
11 Ga0070666_10117784 3300005335 Bacteria 1840
12 Ga0068868_100000032 3300005338 Bacteria 75803
13 Ga0070668_100014741 3300005347 Bacteria 5842
14 Ga0070668_100126917 3300005347 Bacteria 2044
15 Ga0070668_100135670 3300005347 Bacteria 1979
16 Ga0070668_100171801 3300005347 Bacteria 1765
17 Ga0070669_100000291 3300005353 Bacteria 39339
18 Ga0070669_100001402 3300005353 Bacteria 17394
19 Ga0070669_100033136 3300005353 Bacteria 3735
20 Ga0070669_100273551 3300005353 Bacteria 1351
21 Ga0070671_100000005 3300005355 Bacteria 256547
22 Ga0070671_100024920 3300005355 Bacteria 4902
23 Ga0070671_100056828 3300005355 Bacteria 3256
24 Ga0070671_100106480 3300005355 Bacteria 2354
25 Ga0070671_100141484 3300005355 Bacteria 2030
26 Ga0070667_100000160 3300005367 Bacteria 83754
27 Ga0070667_100017417 3300005367 Bacteria 5955
28 Ga0070667_100024857 3300005367 Bacteria 4977
29 Ga0070667_100047529 3300005367 Bacteria 3610
30 Ga0070667_100684047 3300005367 Bacteria 948
31 Ga0068853_100021348 3300005539 Bacteria 5398
32 Ga0070665_100000101 3300005548 Bacteria 159353
33 Ga0070665_100004425 3300005548 Bacteria 14760
34 Ga0070665_100008001 3300005548 Bacteria 10708
35 Ga0068855_100003488 3300005563 Bacteria 19262
36 Ga0068855_100014258 3300005563 Bacteria 9575
37 Ga0068855_100105929 3300005563 Bacteria 3233
38 Ga0068857_100146877 3300005577 Bacteria 2134
39 Ga0068854_100001427 3300005578 Bacteria 14446
40 Ga0068856_100011589 3300005614 Bacteria 8552
41 Ga0068852_100000259 3300005616 Bacteria 35916
42 Ga0068852_100209629 3300005616 Bacteria 1848
43 Ga0068859_100011785 3300005617 Bacteria 8785
44 Ga0068859_100204193 3300005617 Bacteria 2061
45 Ga0068864_100004814 3300005618 Bacteria 11065
46 Ga0068863_100000287 3300005841 Bacteria 52189
47 Ga0068863_100335273 3300005841 Bacteria 1471
48 Ga0068863_100376625 3300005841 Bacteria 1386
49 Ga0068863_100444741 3300005841 Bacteria 1271
50 Ga0068858_100011491 3300005842 Bacteria 8356
51 Ga0068858_100095911 3300005842 Bacteria 2763
52 Ga0068860_100000089 3300005843 Bacteria 152667
53 Ga0068860_100014719 3300005843 Bacteria 7651
54 Ga0068860_100015808 3300005843 Bacteria 7369
55 Ga0068860_100050737 3300005843 Bacteria 3949
56 Ga0068862_100003464 3300005844 Bacteria 13574
57 Ga0068862_100011016 3300005844 Bacteria 7471
58 Ga0068862_100073248 3300005844 Bacteria 2960
59 Ga0068862_100137942 3300005844 Bacteria 2163
60 Ga0068862_100634155 3300005844 Bacteria 1029
61 Ga0081455_10000244 3300005937 Bacteria 70746
62 Ga0075364_10009428 3300006051 Bacteria 5857
63 Ga0075364_10021856 3300006051 Bacteria 4034
64 Ga0075362_10000110 3300006177 Bacteria 22774
65 Ga0075369_10000161 3300006186 Bacteria 18992
66 Ga0075366_10000262 3300006195 Bacteria 23232
67 Ga0075366_10024380 3300006195 Bacteria 3529
68 Ga0075366_10026097 3300006195 Bacteria 3420
69 Ga0075366_10036093 3300006195 Bacteria 2914
70 Ga0075366_10141640 3300006195 Bacteria 1454
71 Ga0075370_10000570 3300006353 Bacteria 14179
72 Ga0075370_10013383 3300006353 Bacteria 4359
73 Ga0075370_10162448 3300006353 Bacteria 1311
74 Ga0097620_100011785 3300006931 Bacteria 8785
75 Ga0079104_1006048 3300006946 Bacteria 4683
76 Ga0079104_1007886 3300006946 Bacteria 3795
77 Ga0105251_10001080 3300009011 Bacteria 23841
78 Ga0105240_10008968 3300009093 Bacteria 14218
79 Ga0105247_10052065 3300009101 Bacteria 2523
80 Ga0105247_10121097 3300009101 Bacteria 1695
81 Ga0105243_10011933 3300009148 Bacteria 6570
82 Ga0105248_10042795 3300009177 Bacteria 5078
83 Ga0105248_10109354 3300009177 Bacteria 3116
84 Ga0105248_10144864 3300009177 Bacteria 2681
85 Ga0105248_10256096 3300009177 Bacteria 1970
86 Ga0105248_10533150 3300009177 Bacteria 1324
87 Ga0105248_10862718 3300009177 Bacteria 1022
88 Ga0105249_10172143 3300009553 Bacteria 2101
89 Ga0157371_10004989 3300013102 Bacteria 11391
90 Ga0157370_10362184 3300013104 Bacteria 1336
91 Ga0163163_10310762 3300014325 Bacteria 1629
92 Ga0157379_10369249 3300014968 Bacteria 1315
93 Ga0163161_10000412 3300017792 Bacteria 35877
94 Ga0209050_1000474 3300025298 Bacteria 71192
95 Ga0207697_10016703 3300025315 Bacteria 3023
96 Ga0207697_10031807 3300025315 Bacteria 2159
97 Ga0207713_1001984 3300025735 Bacteria 15388
98 Ga0207710_10026072 3300025900 Bacteria 2524
99 Ga0207710_10054677 3300025900 Bacteria 1798
100 Ga0207680_10366427 3300025903 Bacteria 1014
101 Ga0207680_10366909 3300025903 Bacteria 1013
102 Ga0207647_10012727 3300025904 Bacteria 5847
103 Ga0207705_10000007 3300025909 Bacteria 597387
104 Ga0207707_10083735 3300025912 Bacteria 2785
105 Ga0207695_10004641 3300025913 Bacteria 18616
106 Ga0207681_10000224 3300025923 Bacteria 44695
107 Ga0207681_10000288 3300025923 Bacteria 37371
108 Ga0207694_10118651 3300025924 Bacteria 2111
109 Ga0207644_10000008 3300025931 Bacteria 354219
110 Ga0207644_10006877 3300025931 Bacteria 7410
111 Ga0207644_10111114 3300025931 Bacteria 2072
112 Ga0207690_10081583 3300025932 Bacteria 2260
113 Ga0207691_10218704 3300025940 Bacteria 1652
114 Ga0207711_10009981 3300025941 Bacteria 7891
115 Ga0207711_10355505 3300025941 Bacteria 1357
116 Ga0207667_10003565 3300025949 Bacteria 19236
117 Ga0207667_10031444 3300025949 Bacteria 5731
118 Ga0207712_10155178 3300025961 Bacteria 1772
119 Ga0207668_10005314 3300025972 Bacteria 7579
120 Ga0207668_10117406 3300025972 Bacteria 2008
121 Ga0207668_10179377 3300025972 Bacteria 1669
122 Ga0207640_10001366 3300025981 Bacteria 13199
123 Ga0207658_10002872 3300025986 Bacteria 12342
124 Ga0207658_10003639 3300025986 Bacteria 10882
125 Ga0207658_10007190 3300025986 Bacteria 7589
126 Ga0207658_10284608 3300025986 Bacteria 1418
127 Ga0207639_10013378 3300026041 Bacteria 5743
128 Ga0207678_10279205 3300026067 Bacteria 1433
129 Ga0207702_10032314 3300026078 Bacteria 4367
130 Ga0207641_10000069 3300026088 Bacteria 154022
131 Ga0207641_10061481 3300026088 Bacteria 3203
132 Ga0207641_10072034 3300026088 Bacteria 2975
133 Ga0207676_10035961 3300026095 Bacteria 3764
134 Ga0207676_10087873 3300026095 Bacteria 2543
135 Ga0207674_10095738 3300026116 Bacteria 2954
136 Ga0207674_10268591 3300026116 Bacteria 1653
137 Ga0207698_10000036 3300026142 Bacteria 105391
138 Ga0209281_1014193 3300027111 Bacteria 1692
139 Ga0209974_10003950 3300027876 Bacteria 5307
140 Ga0268266_10000239 3300028379 Bacteria 93395
141 Ga0268266_10003755 3300028379 Bacteria 14909
142 Ga0268266_10007134 3300028379 Bacteria 10127
143 Ga0268265_10005928 3300028380 Bacteria 8321
144 Ga0268265_10013560 3300028380 Bacteria 5540
145 Ga0268265_10029745 3300028380 Bacteria 3926
146 Ga0268265_10187012 3300028380 Bacteria 1785
147 Ga0268265_10621476 3300028380 Bacteria 1035
148 Ga0268264_10000160 3300028381 Bacteria 152653
149 Ga0268264_10003245 3300028381 Bacteria 14077
150 Ga0268264_10016255 3300028381 Bacteria 6093
151 Ga0307513_10041863 3300031456 Bacteria 5050
152 Ga0307407_10246053 3300031903 Bacteria 1223
153 Ga0307412_10001373 3300031911 Bacteria 13518
154 Ga0307414_10007178 3300032004 Bacteria 6251
155 Ga0307414_10187550 3300032004 Bacteria 1670
156 Ga0307414_10637016 3300032004 Bacteria 960
157 Ga0307411_10050812 3300032005 Bacteria 2702
158 Ga0307510_10180339 3300033180 Bacteria 1675
159 Ga0451843_1542596 3300041509 Bacteria 840
160 Ga0450893_0020370 3300042532 Bacteria 1139
161 Ga0451576_0000024 3300045051 Bacteria 470499
162 Ga0495627_000198 3300046453 Bacteria 65997
163 Ga0495638_0074313 3300046460 Bacteria 2073
164 Ga0495650_0002428 3300046471 Bacteria 15111
165 Ga0495596_0000294 3300046500 Bacteria 33153
166 Ga0495583_0031295 3300046506 Bacteria 2581
167 Ga0495606_0041186 3300046507 Bacteria 3099
168 Ga0495610_0000050 3300046512 Bacteria 143781
169 Ga0495610_0000456 3300046512 Bacteria 42283
170 Ga0495620_0030126 3300046515 Bacteria 2502
171 Ga0495631_0074705 3300046518 Bacteria 1463
172 Ga0495632_0000782 3300046519 Bacteria 28432
173 Ga0495643_0000036 3300046522 Bacteria 238374
174 Ga0495643_0029108 3300046522 Bacteria 3092
175 Ga0495643_0038762 3300046522 Bacteria 2608
176 Ga0495654_0065870 3300046530 Bacteria 1728
177 Ga0495621_0026192 3300046539 Bacteria 1965
178 Ga0495633_0058339 3300046558 Bacteria 1812
179 Ga0495668_0123013 3300046616 Bacteria 1419
180 Ga0495625_0085692 3300046660 Bacteria 2186
181 Ga0495681_0000095 3300047470 Bacteria 76975
182 Ga0495615_0000367 3300048090 Bacteria 7080
183 Ga0495626_0001403 3300048091 Bacteria 19258
184 Ga0496100_0020645 3300048903 Bacteria 3953
185 Ga0496102_0098688 3300048905 Bacteria 2710
186 Ga0496102_0157427 3300048905 Bacteria 2136
187 Ga0496103_0142805 3300048906 Bacteria 1532
188 Ga0496105_0003581 3300048908 Bacteria 11529
189 Ga0496105_0052640 3300048908 Bacteria 3362
190 Ga0496105_0148313 3300048908 Bacteria 1929
191 Ga0496106_0010276 3300048909 Bacteria 6920
192 Ga0496107_0001239 3300048910 Bacteria 15597
193 Ga0496108_0301873 3300048911 Bacteria 1395
194 Ga0496110_0148345 3300048913 Bacteria 2122
195 Ga0496111_0098898 3300048914 Bacteria 2142
196 Ga0496113_0753981 3300048916 Bacteria 775
197 Ga0496114_0018464 3300048917 Bacteria 5639
198 Ga0496115_0153824 3300048918 Bacteria 1900
199 Ga0496116_0000149 3300048919 Bacteria 141841
200 Ga0496116_0249296 3300048919 Bacteria 885
201 Ga0496118_0014121 3300048921 Bacteria 7492
202 Ga0496118_0099231 3300048921 Bacteria 1975
203 Ga0496118_0190212 3300048921 Bacteria 1228
204 Ga0496119_0059308 3300048922 Bacteria 2300
205 Ga0496121_0000024 3300048924 Bacteria 462959
206 Ga0496121_0000720 3300048924 Bacteria 61224
207 Ga0496121_0001791 3300048924 Bacteria 34731
208 Ga0496121_0007488 3300048924 Bacteria 13186
209 Ga0496122_0003939 3300048925 Bacteria 18968
210 Ga0496122_0011252 3300048925 Bacteria 9091
211 Ga0496123_0000830 3300048926 Bacteria 49505
212 Ga0496123_0001810 3300048926 Bacteria 28138
213 Ga0496124_0012057 3300048927 Bacteria 8582
214 Ga0496124_0014020 3300048927 Bacteria 7776
215 Ga0496124_0032678 3300048927 Bacteria 4589
216 Ga0496124_0052460 3300048927 Bacteria 3464
217 Ga0496124_0065628 3300048927 Bacteria 3025
218 Ga0496124_0111475 3300048927 Bacteria 2201
219 Ga0496125_0016531 3300048928 Bacteria 7080
220 Ga0496125_0035272 3300048928 Bacteria 4392
221 Ga0496126_0000261 3300048929 Bacteria 112027
222 Ga0496126_0022193 3300048929 Bacteria 6181
223 Ga0496126_0068258 3300048929 Bacteria 3175
224 Ga0501034_0373271 3300049571 Bacteria 1352
225 Ga0501074_0201881 3300049590 Bacteria 1417
226 Ga0501249_030365 3300049679 Bacteria 1203
227 nmdc:mga03683_3_c1 3300050489 Bacteria 285872
228 nmdc:mga03n38_3000_c1 3300050490 Bacteria 5340
229 nmdc:mga00v17_11686_c1 3300050491 Bacteria 4829
230 nmdc:mga00v17_2784_c1 3300050491 Bacteria 8975
231 nmdc:mga00v17_56982_c1 3300050491 Bacteria 2389
232 nmdc:mga0k408_189056_c1 3300050493 Bacteria 1228
233 nmdc:mga0k408_48659_c1 3300050493 Bacteria 2453
234 nmdc:mga0k408_5211_c2 3300050493 Bacteria 3889
235 nmdc:mga0k408_54548_c1 3300050493 Bacteria 2316
236 nmdc:mga0k408_622_c1 3300050493 Bacteria 19548
237 nmdc:mga0k408_65174_c1 3300050493 Bacteria 2120
238 nmdc:mga07m45_12661_c2 3300050496 Bacteria 4056
239 nmdc:mga07m45_148707_c1 3300050496 Bacteria 1358
240 nmdc:mga07m45_31657_c1 3300050496 Bacteria 2932
241 nmdc:mga07m45_6453_c2 3300050496 Bacteria 2144
242 nmdc:mga07m45_91_c1 3300050496 Bacteria 31768
243 nmdc:mga0rr50_83070_c1 3300050513 Bacteria 1629
244 nmdc:mga0sz30_345_c1 3300050516 Bacteria 17739
245 Ga0500643_000005 3300053087 Bacteria 539775
246 Ga0500643_000096 3300053087 Bacteria 92125
247 Ga0500643_011503 3300053087 Bacteria 3226
248 Ga0500646_0048272 3300053090 Bacteria 1220
249 Ga0500641_0013828 3300053096 Bacteria 2969
250 Ga0500562_008082 3300053108 Bacteria 2653
251 Ga0500562_022310 3300053108 Bacteria 1650
252 Ga0500592_001104 3300053116 Bacteria 4407
253 Ga0500592_012231 3300053116 Bacteria 1372
254 Ga0500595_038905 3300053119 Bacteria 1543
255 Ga0500607_000541 3300053121 Bacteria 36492
256 Ga0500607_000953 3300053121 Bacteria 27645
257 Ga0500618_002634 3300053125 Bacteria 6609
258 Ga0500652_106352 3300053131 Bacteria 1173
259 Ga0500559_0000659 3300053136 Bacteria 23217
260 Ga0500559_0001475 3300053136 Bacteria 13281
261 Ga0500568_0002468 3300053139 Bacteria 10868
262 Ga0500568_0019737 3300053139 Bacteria 2924
263 Ga0500568_0032460 3300053139 Bacteria 2147
264 Ga0500588_0109896 3300053146 Bacteria 960
265 Ga0500604_0010000 3300053151 Bacteria 2533
266 Ga0500616_0000161 3300053153 Bacteria 111424
267 Ga0500616_0003296 3300053153 Bacteria 12462
268 Ga0500622_0000587 3300053156 Bacteria 33059
269 Ga0500645_001624 3300053730 Bacteria 11124
270 Ga0500587_000896 3300053739 Bacteria 3971

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005563 Ga0068855_100014258 Ga0068855_1000142583 226
2 3300005578 Ga0068854_100001427 Ga0068854_10000142711 226
3 3300005614 Ga0068856_100011589 Ga0068856_1000115893 226
4 3300005616 Ga0068852_100000259 Ga0068852_10000025939 226
5 3300009093 Ga0105240_10008968 Ga0105240_1000896810 226
6 3300025904 Ga0207647_10012727 Ga0207647_100127273 226
7 3300025913 Ga0207695_10004641 Ga0207695_1000464110 226
8 3300025924 Ga0207694_10118651 Ga0207694_101186511 226
9 3300025949 Ga0207667_10031444 Ga0207667_100314442 226
10 3300025981 Ga0207640_10001366 Ga0207640_100013669 226
11 3300026078 Ga0207702_10032314 Ga0207702_100323143 226
12 3300026116 Ga0207674_10268591 Ga0207674_102685912 226
13 3300026142 Ga0207698_10000036 Ga0207698_10000036108 226
14 3300053116 Ga0500592_001104 Ga0500592_001104_3680_4366 226
15 3300053121 Ga0500607_000541 Ga0500607_000541_14507_15283 226
16 3300005355 Ga0070671_100056828 Ga0070671_1000568283 229
17 3300025931 Ga0207644_10006877 Ga0207644_100068773 229
18 3300048916 Ga0496113_0753981 Ga0496113_0753981_74_763 229
19 3300041509 Ga0451843_1542596 Ga0451843_1542596_23_724 233
20 3300048919 Ga0496116_0249296 Ga0496116_0249296_150_851 233
21 3300005347 Ga0070668_100171801 Ga0070668_1001718011 236
22 3300005353 Ga0070669_100273551 Ga0070669_1002735512 236
23 3300005327 Ga0070658_10000811 Ga0070658_1000081130 237
24 3300025909 Ga0207705_10000007 Ga0207705_10000007246 237
25 3300053139 Ga0500568_0032460 Ga0500568_0032460_1392_2132 237
26 3300050496 nmdc:mga07m45_31657_c1 nmdc:mga07m45_31657_c1_1536_2312 244
27 3300048921 Ga0496118_0014121 Ga0496118_0014121_4205_4984 245
28 3300048924 Ga0496121_0000720 Ga0496121_0000720_7987_8766 245
29 3300005563 Ga0068855_100105929 Ga0068855_1001059293 246
30 3300005616 Ga0068852_100209629 Ga0068852_1002096292 246
31 3300053136 Ga0500559_0001475 Ga0500559_0001475_5603_6343 246
32 3300006946 Ga0079104_1006048 Ga0079104_10060483 247
33 3300027111 Ga0209281_1014193 Ga0209281_10141932 247
34 3300053108 Ga0500562_008082 Ga0500562_008082_1760_2536 247
35 3300005841 Ga0068863_100335273 Ga0068863_1003352732 249
36 3300050491 nmdc:mga00v17_56982_c1 nmdc:mga00v17_56982_c1_439_1215 249
37 3300053151 Ga0500604_0010000 Ga0500604_0010000_803_1579 249
38 3300025912 Ga0207707_10083735 Ga0207707_100837352 253
39 iso_pu_bacteria 2990265787 2990268136 253
40 iso_pu_bacteria 2993693658 2993696839 253
41 iso_pu_bacteria 2599185354 2600203112 254
42 iso_pu_bacteria 2751185897 2753766573 254
43 iso_pu_bacteria 2818991438 2819551084 254
44 iso_pu_bacteria 2896253425 2896253484 254
45 iso_pu_bacteria 2919138771 2919138890 254
46 iso_pu_bacteria 8054302542 8054303998 254
47 iso_pu_bacteria 8057101203 8057105392 254
48 iso_pu_bacteria 2830075706 2830076132 255
49 3300027876 Ga0209974_10003950 Ga0209974_100039504 257
50 2162886007 SwRhRL2b_contig_1836750 SwRhRL2b_0457.00001300 258
51 2162886007 SwRhRL2b_contig_3198045 SwRhRL2b_0005.00000600 258
52 3300002459 JGI24751J29686_10000270 JGI24751J29686_1000027013 258
53 3300003791 Ga0055530_10040498 Ga0055530_100404981 258
54 3300005289 Ga0065704_10006737 Ga0065704_100067372 258
55 3300005289 Ga0065704_10070157 Ga0065704_1007015740 258
56 3300005289 Ga0065704_10072701 Ga0065704_100727017 258
57 3300005295 Ga0065707_10083963 Ga0065707_100839637 258
58 3300005335 Ga0070666_10027349 Ga0070666_100273492 258
59 3300005335 Ga0070666_10117784 Ga0070666_101177842 258
60 3300005338 Ga0068868_100000032 Ga0068868_10000003210 258
61 3300005347 Ga0070668_100014741 Ga0070668_1000147413 258
62 3300005347 Ga0070668_100126917 Ga0070668_1001269173 258
63 3300005347 Ga0070668_100135670 Ga0070668_1001356703 258
64 3300005353 Ga0070669_100000291 Ga0070669_10000029117 258
65 3300005353 Ga0070669_100001402 Ga0070669_1000014028 258
66 3300005353 Ga0070669_100033136 Ga0070669_1000331364 258
67 3300005355 Ga0070671_100000005 Ga0070671_10000000553 258
68 3300005355 Ga0070671_100024920 Ga0070671_1000249202 258
69 3300005355 Ga0070671_100106480 Ga0070671_1001064802 258
70 3300005355 Ga0070671_100141484 Ga0070671_1001414843 258
71 3300005367 Ga0070667_100000160 Ga0070667_10000016061 258
72 3300005367 Ga0070667_100017417 Ga0070667_1000174176 258
73 3300005367 Ga0070667_100024857 Ga0070667_1000248571 258
74 3300005367 Ga0070667_100047529 Ga0070667_1000475293 258
75 3300005367 Ga0070667_100684047 Ga0070667_1006840471 258
76 3300005539 Ga0068853_100021348 Ga0068853_1000213484 258
77 3300005548 Ga0070665_100000101 Ga0070665_100000101109 258
78 3300005548 Ga0070665_100004425 Ga0070665_10000442511 258
79 3300005548 Ga0070665_100008001 Ga0070665_1000080016 258
80 3300005563 Ga0068855_100003488 Ga0068855_1000034887 258
81 3300005577 Ga0068857_100146877 Ga0068857_1001468772 258
82 3300005617 Ga0068859_100011785 Ga0068859_1000117853 258
83 3300005617 Ga0068859_100204193 Ga0068859_1002041933 258
84 3300005618 Ga0068864_100004814 Ga0068864_1000048142 258
85 3300005841 Ga0068863_100000287 Ga0068863_10000028722 258
86 3300005841 Ga0068863_100376625 Ga0068863_1003766252 258
87 3300005841 Ga0068863_100444741 Ga0068863_1004447412 258
88 3300005842 Ga0068858_100011491 Ga0068858_1000114917 258
89 3300005842 Ga0068858_100095911 Ga0068858_1000959112 258
90 3300005843 Ga0068860_100000089 Ga0068860_10000008936 258
91 3300005843 Ga0068860_100014719 Ga0068860_1000147198 258
92 3300005843 Ga0068860_100015808 Ga0068860_1000158086 258
93 3300005843 Ga0068860_100050737 Ga0068860_1000507373 258
94 3300005844 Ga0068862_100003464 Ga0068862_1000034642 258
95 3300005844 Ga0068862_100011016 Ga0068862_1000110166 258
96 3300005844 Ga0068862_100073248 Ga0068862_1000732483 258
97 3300005844 Ga0068862_100137942 Ga0068862_1001379423 258
98 3300005844 Ga0068862_100634155 Ga0068862_1006341551 258
99 3300005937 Ga0081455_10000244 Ga0081455_1000024470 258
100 3300006051 Ga0075364_10009428 Ga0075364_100094283 258
101 3300006051 Ga0075364_10021856 Ga0075364_100218562 258
102 3300006177 Ga0075362_10000110 Ga0075362_100001102 258
103 3300006186 Ga0075369_10000161 Ga0075369_1000016116 258
104 3300006195 Ga0075366_10000262 Ga0075366_1000026217 258
105 3300006195 Ga0075366_10024380 Ga0075366_100243804 258
106 3300006195 Ga0075366_10026097 Ga0075366_100260973 258
107 3300006195 Ga0075366_10036093 Ga0075366_100360933 258
108 3300006195 Ga0075366_10141640 Ga0075366_101416402 258
109 3300006353 Ga0075370_10000570 Ga0075370_1000057011 258
110 3300006353 Ga0075370_10013383 Ga0075370_100133832 258
111 3300006353 Ga0075370_10162448 Ga0075370_101624482 258
112 3300006931 Ga0097620_100011785 Ga0097620_1000117853 258
113 3300006946 Ga0079104_1007886 Ga0079104_10078862 258
114 3300009011 Ga0105251_10001080 Ga0105251_100010803 258
115 3300009101 Ga0105247_10052065 Ga0105247_100520652 258
116 3300009101 Ga0105247_10121097 Ga0105247_101210972 258
117 3300009148 Ga0105243_10011933 Ga0105243_100119334 258
118 3300009177 Ga0105248_10042795 Ga0105248_100427954 258
119 3300009177 Ga0105248_10109354 Ga0105248_101093542 258
120 3300009177 Ga0105248_10144864 Ga0105248_101448643 258
121 3300009177 Ga0105248_10256096 Ga0105248_102560962 258
122 3300009177 Ga0105248_10533150 Ga0105248_105331502 258
123 3300009177 Ga0105248_10862718 Ga0105248_108627182 258
124 3300009553 Ga0105249_10172143 Ga0105249_101721432 258
125 3300013102 Ga0157371_10004989 Ga0157371_1000498912 258
126 3300013104 Ga0157370_10362184 Ga0157370_103621842 258
127 3300014325 Ga0163163_10310762 Ga0163163_103107622 258
128 3300014968 Ga0157379_10369249 Ga0157379_103692492 258
129 3300017792 Ga0163161_10000412 Ga0163161_1000041216 258
130 3300025298 Ga0209050_1000474 Ga0209050_100047451 258
131 3300025315 Ga0207697_10016703 Ga0207697_100167033 258
132 3300025315 Ga0207697_10031807 Ga0207697_100318072 258
133 3300025735 Ga0207713_1001984 Ga0207713_100198413 258
134 3300025900 Ga0207710_10026072 Ga0207710_100260723 258
135 3300025900 Ga0207710_10054677 Ga0207710_100546772 258
136 3300025903 Ga0207680_10366427 Ga0207680_103664272 258
137 3300025903 Ga0207680_10366909 Ga0207680_103669092 258
138 3300025923 Ga0207681_10000224 Ga0207681_1000022451 258
139 3300025923 Ga0207681_10000288 Ga0207681_100002889 258
140 3300025931 Ga0207644_10000008 Ga0207644_10000008270 258
141 3300025931 Ga0207644_10111114 Ga0207644_101111143 258
142 3300025932 Ga0207690_10081583 Ga0207690_100815832 258
143 3300025940 Ga0207691_10218704 Ga0207691_102187041 258
144 3300025941 Ga0207711_10009981 Ga0207711_100099814 258
145 3300025941 Ga0207711_10355505 Ga0207711_103555052 258
146 3300025949 Ga0207667_10003565 Ga0207667_100035657 258
147 3300025961 Ga0207712_10155178 Ga0207712_101551782 258
148 3300025972 Ga0207668_10005314 Ga0207668_100053148 258
149 3300025972 Ga0207668_10117406 Ga0207668_101174063 258
150 3300025972 Ga0207668_10179377 Ga0207668_101793773 258
151 3300025986 Ga0207658_10002872 Ga0207658_100028729 258
152 3300025986 Ga0207658_10003639 Ga0207658_100036396 258
153 3300025986 Ga0207658_10007190 Ga0207658_100071904 258
154 3300025986 Ga0207658_10284608 Ga0207658_102846082 258
155 3300026041 Ga0207639_10013378 Ga0207639_100133782 258
156 3300026067 Ga0207678_10279205 Ga0207678_102792052 258
157 3300026088 Ga0207641_10000069 Ga0207641_10000069114 258
158 3300026088 Ga0207641_10061481 Ga0207641_100614813 258
159 3300026088 Ga0207641_10072034 Ga0207641_100720342 258
160 3300026095 Ga0207676_10035961 Ga0207676_100359615 258
161 3300026095 Ga0207676_10087873 Ga0207676_100878732 258
162 3300026116 Ga0207674_10095738 Ga0207674_100957381 258
163 3300028379 Ga0268266_10000239 Ga0268266_1000023990 258
164 3300028379 Ga0268266_10003755 Ga0268266_100037555 258
165 3300028379 Ga0268266_10007134 Ga0268266_100071345 258
166 3300028380 Ga0268265_10005928 Ga0268265_100059283 258
167 3300028380 Ga0268265_10013560 Ga0268265_100135603 258
168 3300028380 Ga0268265_10029745 Ga0268265_100297453 258
169 3300028380 Ga0268265_10187012 Ga0268265_101870122 258
170 3300028380 Ga0268265_10621476 Ga0268265_106214762 258
171 3300028381 Ga0268264_10000160 Ga0268264_10000160112 258
172 3300028381 Ga0268264_10003245 Ga0268264_100032454 258
173 3300028381 Ga0268264_10016255 Ga0268264_100162553 258
174 3300031456 Ga0307513_10041863 Ga0307513_100418632 258
175 3300031903 Ga0307407_10246053 Ga0307407_102460532 258
176 3300031911 Ga0307412_10001373 Ga0307412_100013736 258
177 3300032004 Ga0307414_10007178 Ga0307414_100071782 258
178 3300032004 Ga0307414_10187550 Ga0307414_101875502 258
179 3300032004 Ga0307414_10637016 Ga0307414_106370162 258
180 3300032005 Ga0307411_10050812 Ga0307411_100508122 258
181 3300033180 Ga0307510_10180339 Ga0307510_101803392 258
182 3300042532 Ga0450893_0020370 Ga0450893_0020370_42_818 258
183 3300045051 Ga0451576_0000024 Ga0451576_0000024_109783_110559 258
184 3300046453 Ga0495627_000198 Ga0495627_000198_24753_25529 258
185 3300046460 Ga0495638_0074313 Ga0495638_0074313_984_1760 258
186 3300046471 Ga0495650_0002428 Ga0495650_0002428_7189_7965 258
187 3300046500 Ga0495596_0000294 Ga0495596_0000294_23279_24055 258
188 3300046506 Ga0495583_0031295 Ga0495583_0031295_561_1337 258
189 3300046507 Ga0495606_0041186 Ga0495606_0041186_1562_2338 258
190 3300046512 Ga0495610_0000050 Ga0495610_0000050_120483_121259 258
191 3300046512 Ga0495610_0000456 Ga0495610_0000456_6278_7054 258
192 3300046515 Ga0495620_0030126 Ga0495620_0030126_702_1478 258
193 3300046518 Ga0495631_0074705 Ga0495631_0074705_544_1320 258
194 3300046519 Ga0495632_0000782 Ga0495632_0000782_6909_7685 258
195 3300046522 Ga0495643_0000036 Ga0495643_0000036_122797_123573 258
196 3300046522 Ga0495643_0029108 Ga0495643_0029108_580_1356 258
197 3300046522 Ga0495643_0038762 Ga0495643_0038762_557_1333 258
198 3300046530 Ga0495654_0065870 Ga0495654_0065870_652_1428 258
199 3300046539 Ga0495621_0026192 Ga0495621_0026192_768_1544 258
200 3300046558 Ga0495633_0058339 Ga0495633_0058339_411_1187 258
201 3300046616 Ga0495668_0123013 Ga0495668_0123013_72_848 258
202 3300046660 Ga0495625_0085692 Ga0495625_0085692_885_1661 258
203 3300047470 Ga0495681_0000095 Ga0495681_0000095_24775_25551 258
204 3300048090 Ga0495615_0000367 Ga0495615_0000367_380_1156 258
205 3300048091 Ga0495626_0001403 Ga0495626_0001403_1350_2126 258
206 3300048903 Ga0496100_0020645 Ga0496100_0020645_1846_2622 258
207 3300048905 Ga0496102_0098688 Ga0496102_0098688_1743_2519 258
208 3300048905 Ga0496102_0157427 Ga0496102_0157427_424_1203 258
209 3300048906 Ga0496103_0142805 Ga0496103_0142805_186_962 258
210 3300048908 Ga0496105_0003581 Ga0496105_0003581_2344_3123 258
211 3300048908 Ga0496105_0052640 Ga0496105_0052640_1360_2136 258
212 3300048908 Ga0496105_0148313 Ga0496105_0148313_1110_1886 258
213 3300048909 Ga0496106_0010276 Ga0496106_0010276_1587_2363 258
214 3300048910 Ga0496107_0001239 Ga0496107_0001239_11532_12308 258
215 3300048911 Ga0496108_0301873 Ga0496108_0301873_576_1352 258
216 3300048913 Ga0496110_0148345 Ga0496110_0148345_447_1223 258
217 3300048914 Ga0496111_0098898 Ga0496111_0098898_458_1234 258
218 3300048917 Ga0496114_0018464 Ga0496114_0018464_3411_4187 258
219 3300048918 Ga0496115_0153824 Ga0496115_0153824_362_1138 258
220 3300048919 Ga0496116_0000149 Ga0496116_0000149_48928_49704 258
221 3300048921 Ga0496118_0099231 Ga0496118_0099231_821_1597 258
222 3300048921 Ga0496118_0190212 Ga0496118_0190212_326_1102 258
223 3300048922 Ga0496119_0059308 Ga0496119_0059308_828_1607 258
224 3300048924 Ga0496121_0000024 Ga0496121_0000024_193128_193919 258
225 3300048924 Ga0496121_0001791 Ga0496121_0001791_5401_6177 258
226 3300048924 Ga0496121_0007488 Ga0496121_0007488_8778_9554 258
227 3300048925 Ga0496122_0003939 Ga0496122_0003939_8251_9027 258
228 3300048925 Ga0496122_0011252 Ga0496122_0011252_4290_5066 258
229 3300048926 Ga0496123_0000830 Ga0496123_0000830_24770_25546 258
230 3300048926 Ga0496123_0001810 Ga0496123_0001810_19886_20662 258
231 3300048927 Ga0496124_0012057 Ga0496124_0012057_2500_3276 258
232 3300048927 Ga0496124_0014020 Ga0496124_0014020_68_844 258
233 3300048927 Ga0496124_0032678 Ga0496124_0032678_1222_1998 258
234 3300048927 Ga0496124_0052460 Ga0496124_0052460_597_1373 258
235 3300048927 Ga0496124_0065628 Ga0496124_0065628_70_846 258
236 3300048927 Ga0496124_0111475 Ga0496124_0111475_328_1104 258
237 3300048928 Ga0496125_0016531 Ga0496125_0016531_3872_4648 258
238 3300048928 Ga0496125_0035272 Ga0496125_0035272_3509_4285 258
239 3300048929 Ga0496126_0000261 Ga0496126_0000261_91839_92615 258
240 3300048929 Ga0496126_0022193 Ga0496126_0022193_3577_4353 258
241 3300048929 Ga0496126_0068258 Ga0496126_0068258_473_1249 258
242 3300049571 Ga0501034_0373271 Ga0501034_0373271_517_1293 258
243 3300049590 Ga0501074_0201881 Ga0501074_0201881_408_1187 258
244 3300049679 Ga0501249_030365 Ga0501249_030365_213_989 258
245 3300050489 nmdc:mga03683_3_c1 nmdc:mga03683_3_c1_143922_144701 258
246 3300050490 nmdc:mga03n38_3000_c1 nmdc:mga03n38_3000_c1_2187_2966 258
247 3300050491 nmdc:mga00v17_11686_c1 nmdc:mga00v17_11686_c1_3886_4671 258
248 3300050491 nmdc:mga00v17_2784_c1 nmdc:mga00v17_2784_c1_1763_2542 258
249 3300050493 nmdc:mga0k408_189056_c1 nmdc:mga0k408_189056_c1_28_861 258
250 3300050493 nmdc:mga0k408_48659_c1 nmdc:mga0k408_48659_c1_1051_1827 258
251 3300050493 nmdc:mga0k408_5211_c2 nmdc:mga0k408_5211_c2_1869_2645 258
252 3300050493 nmdc:mga0k408_54548_c1 nmdc:mga0k408_54548_c1_1143_1919 258
253 3300050493 nmdc:mga0k408_622_c1 nmdc:mga0k408_622_c1_8274_9053 258
254 3300050493 nmdc:mga0k408_65174_c1 nmdc:mga0k408_65174_c1_713_1489 258
255 3300050496 nmdc:mga07m45_12661_c2 nmdc:mga07m45_12661_c2_2360_3136 258
256 3300050496 nmdc:mga07m45_148707_c1 nmdc:mga07m45_148707_c1_425_1201 258
257 3300050496 nmdc:mga07m45_6453_c2 nmdc:mga07m45_6453_c2_417_1193 258
258 3300050496 nmdc:mga07m45_91_c1 nmdc:mga07m45_91_c1_22038_22814 258
259 3300050513 nmdc:mga0rr50_83070_c1 nmdc:mga0rr50_83070_c1_243_1022 258
260 3300050516 nmdc:mga0sz30_345_c1 nmdc:mga0sz30_345_c1_13678_14457 258
261 3300053087 Ga0500643_000005 Ga0500643_000005_341152_341928 258
262 3300053087 Ga0500643_000096 Ga0500643_000096_30376_31158 258
263 3300053087 Ga0500643_011503 Ga0500643_011503_782_1558 258
264 3300053090 Ga0500646_0048272 Ga0500646_0048272_134_910 258
265 3300053096 Ga0500641_0013828 Ga0500641_0013828_2055_2831 258
266 3300053108 Ga0500562_022310 Ga0500562_022310_558_1334 258
267 3300053116 Ga0500592_012231 Ga0500592_012231_500_1288 258
268 3300053119 Ga0500595_038905 Ga0500595_038905_297_1073 258
269 3300053121 Ga0500607_000953 Ga0500607_000953_19478_20254 258
270 3300053125 Ga0500618_002634 Ga0500618_002634_1477_2268 258
271 3300053131 Ga0500652_106352 Ga0500652_106352_276_1052 258
272 3300053136 Ga0500559_0000659 Ga0500559_0000659_14990_15766 258
273 3300053139 Ga0500568_0002468 Ga0500568_0002468_6359_7144 258
274 3300053139 Ga0500568_0019737 Ga0500568_0019737_1376_2164 258
275 3300053146 Ga0500588_0109896 Ga0500588_0109896_167_943 258
276 3300053153 Ga0500616_0000161 Ga0500616_0000161_60869_61654 258
277 3300053153 Ga0500616_0003296 Ga0500616_0003296_5225_6001 258
278 3300053156 Ga0500622_0000587 Ga0500622_0000587_14018_14794 258
279 3300053730 Ga0500645_001624 Ga0500645_001624_647_1423 258
280 3300053739 Ga0500587_000896 Ga0500587_000896_1014_1799 258

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13614

AAA_31

AAA domain

20

195

0.98

PF01656

CbiA

CobQ/CobB/MinD/ParA nucleotide binding domain

23

246

0.92

PF02374

ArsA_ATPase

Anion-transporting ATPase

22

75

0.91

PF00142

Fer4_NifH

4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family

24

93

0.87

PF06564

CBP_BcsQ

Cellulose biosynthesis protein BcsQ

21

265

0.83

PF10609

ParA

NUBPL iron-transfer P-loop NTPase

20

267

0.81

PF09140

MipZ

ATPase MipZ

21

193

0.66

Structural Annotation

Top 5 Hits

ID Description Score Start End
2bek-assembly2.cif.gz_D structure of the bacterial chromosome segregation protein soj 0.9504 1 251
2bek-assembly2.cif.gz_D structure of the bacterial chromosome segregation protein soj 0.9391 1 251
2bej-assembly1.cif.gz_A structure of the bacterial chromosome segregation protein soj 0.9377 1 253
2bej-assembly1.cif.gz_A structure of the bacterial chromosome segregation protein soj 0.9267 1 253
4pfs-assembly1.cif.gz_A crystal structure of cobyrinic acid a,c-diamide synthase from mycobacterium smegmatis 0.91 2 256
ID Description Score Start End Superfamily
af_Q1LVD4_80_340_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9551 2 250 3.40.50.300
af_P9WLT1_58_317_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9499 1 251 3.40.50.300
2bekD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9465 1 253 3.40.50.300
2bekD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.939 1 253 3.40.50.300
af_P9WLT1_58_317_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9216 1 251 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7C5R6K5-F1-model_v4 ParA family protein 0.9765 14 249
AF-A0A2E4X518-F1-model_v4 Chromosome partitioning protein ParA 0.9734 1 251
AF-A0A4R1SAS2-F1-model_v4 Chromosome segregation ATPase 0.9726 2 250
AF-A0A7Y2IQ31-F1-model_v4 ParA family protein 0.9726 1 250
AF-A0A7W1JU92-F1-model_v4 ParA family protein 0.9722 1 252

Feature Viewer

pLDDT pTM Quality
84.66 0.87 High
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Predicted Structure (AlphaFold2)

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