F382652

General Info

Members Datasets Scaffolds Average Seq Length
278 158 554 352

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0072408|Ga0501033_0072408_1172_2338
Length 388
Sequence MVAGDERRGYPAAPQARGKDNRRSAVPRFLKGENALQLLLVFVPVALILDHLTNAGAVAVFATSALAIIPLAGLMGRATEELSERLGQGVGGLLNATFGNAAELIIAGIALRAGYFDLVKASITGSIIGNILLVFGLSALAGGVRHPTQRFNRTAASQGGTLLVLSGIGLVVPAIFHILVRGTPGAHEQEVSLEIAVVLFLTYLLSLIFTLHTHSHLYTGEVPATSASHPVHPVVPARRSITMLVLATVGIAVMAELLVGAAEVTAHALGWSDVFVGVILVAVIGNAAEHSTAVLMALKNKMDVAVNIAVGSSIQVALFVAPLLLFLSYVIAPSPMNLIFTPLEVLAVVLAVGIIALIADDGETHWMEGVQLLAVYIILGIAFFYIPV

Samples

Sample ID Description Type Environment
1 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
65 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
66 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
102 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
109 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
110 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
111 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
113 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
114 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
115 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
116 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
117 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
118 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
119 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
120 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
121 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
122 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
128 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
129 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
132 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
133 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
134 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
135 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
136 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
137 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
138 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
143 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
144 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
148 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
152 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
157 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
158 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.64
Metatranscriptomes 0.36
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.16
Nodule 0
Rhizoplane 0
Rhizosphere 97.12
Stem 0
Stem Tuber 0
Unclassified 8.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501033_0072408 3300049570 Bacteria 2530
2 JGI24746J21847_1001880 3300001977 Bacteria 3349
3 JGI25406J46586_10016242 3300003203 Bacteria 3109
4 Ga0065712_10068132 3300005290 Bacteria 14193
5 Ga0065712_10114882 3300005290 Bacteria 1760
6 Ga0065715_10015631 3300005293 Bacteria 2333
7 Ga0065715_10158609 3300005293 Bacteria 1651
8 Ga0065707_10002750 3300005295 Bacteria 4628
9 Ga0065707_10084152 3300005295 Bacteria 7610
10 Ga0070690_100031936 3300005330 Unclassified 3284
11 Ga0070670_100231950 3300005331 Bacteria 1607
12 Ga0070677_10002756 3300005333 Bacteria 5623
13 Ga0070677_10015971 3300005333 Bacteria 2667
14 Ga0068869_100017214 3300005334 Bacteria 4893
15 Ga0070666_10286816 3300005335 Bacteria 1171
16 Ga0070687_100012289 3300005343 Bacteria 3776
17 Ga0070687_100040137 3300005343 Bacteria 2357
18 Ga0070661_100059673 3300005344 Bacteria 2798
19 Ga0070661_100091922 3300005344 Bacteria 2248
20 Ga0070668_100018561 3300005347 Bacteria 5222
21 Ga0070669_100001085 3300005353 Bacteria 19909
22 Ga0070669_100021013 3300005353 Unclassified 4664
23 Ga0070675_100034956 3300005354 Bacteria 4081
24 Ga0070675_100098010 3300005354 Bacteria 2465
25 Ga0070671_100058500 3300005355 Bacteria 3208
26 Ga0070671_100142730 3300005355 Unclassified 2021
27 Ga0070673_100017869 3300005364 Bacteria 5053
28 Ga0070659_100205324 3300005366 Bacteria 1623
29 Ga0070694_100089557 3300005444 Unclassified 2156
30 Ga0070663_100106459 3300005455 Unclassified 2101
31 Ga0070678_100153178 3300005456 Unclassified 1859
32 Ga0070662_100000205 3300005457 Bacteria 34590
33 Ga0070662_100117738 3300005457 Unclassified 2032
34 Ga0068867_100095668 3300005459 Unclassified 2260
35 Ga0070685_10001352 3300005466 Bacteria 12864
36 Ga0070685_10002962 3300005466 Bacteria 8670
37 Ga0070685_10006964 3300005466 Bacteria 5770
38 Ga0070699_100115069 3300005518 Bacteria 2363
39 Ga0070672_100005529 3300005543 Bacteria 8389
40 Ga0070672_100121678 3300005543 Bacteria 2137
41 Ga0070686_100000078 3300005544 Bacteria 70953
42 Ga0070686_100032575 3300005544 Unclassified 3196
43 Ga0070665_100086322 3300005548 Bacteria 3143
44 Ga0070664_100025135 3300005564 Bacteria 4934
45 Ga0070664_100134008 3300005564 Bacteria 2177
46 Ga0070664_100228240 3300005564 Bacteria 1668
47 Ga0068857_100064296 3300005577 Bacteria 3262
48 Ga0070702_100048621 3300005615 Bacteria 2415
49 Ga0068859_100039894 3300005617 Bacteria 4712
50 Ga0068859_100430929 3300005617 Bacteria 1415
51 Ga0068864_100051161 3300005618 Unclassified 3558
52 Ga0068864_100302538 3300005618 Bacteria 1498
53 Ga0068861_100069211 3300005719 Unclassified 2730
54 Ga0068861_100217664 3300005719 Bacteria 1612
55 Ga0068863_100004805 3300005841 Bacteria 13307
56 Ga0068863_100265857 3300005841 Bacteria 1659
57 Ga0068858_100045805 3300005842 Bacteria 4055
58 Ga0068860_100004416 3300005843 Bacteria 14366
59 Ga0068862_100001140 3300005844 Bacteria 25178
60 Ga0068862_100377353 3300005844 Bacteria 1322
61 Ga0068862_100396241 3300005844 Bacteria 1291
62 Ga0081539_10001115 3300005985 Bacteria 48750
63 Ga0081539_10007290 3300005985 Bacteria 10152
64 Ga0075367_10007882 3300006178 Bacteria 5483
65 Ga0075366_10005449 3300006195 Bacteria 6896
66 Ga0075428_100010122 3300006844 Bacteria 10477
67 Ga0075428_100015604 3300006844 Bacteria 8421
68 Ga0075428_100048761 3300006844 Bacteria 4647
69 Ga0075428_100298231 3300006844 Bacteria 1733
70 Ga0075430_100002950 3300006846 Bacteria 14234
71 Ga0075430_100031153 3300006846 Bacteria 4526
72 Ga0075430_100057926 3300006846 Bacteria 3258
73 Ga0075430_100059492 3300006846 Bacteria 3212
74 Ga0075431_100001203 3300006847 Bacteria 23373
75 Ga0075431_100026848 3300006847 Bacteria 5906
76 Ga0075433_10002442 3300006852 Bacteria 14147
77 Ga0075434_100007286 3300006871 Bacteria 10236
78 Ga0075429_100000982 3300006880 Bacteria 22672
79 Ga0075429_100017600 3300006880 Bacteria 6179
80 Ga0075429_100029544 3300006880 Bacteria 4760
81 Ga0075429_100030483 3300006880 Bacteria 4686
82 Ga0068865_100051612 3300006881 Unclassified 2848
83 Ga0097620_100039893 3300006931 Bacteria 4712
84 Ga0097620_100430918 3300006931 Bacteria 1415
85 Ga0111539_10002586 3300009094 Bacteria 23976
86 Ga0111539_10004982 3300009094 Bacteria 17277
87 Ga0111539_10014615 3300009094 Bacteria 9797
88 Ga0111539_10027790 3300009094 Bacteria 6910
89 Ga0111539_10057739 3300009094 Bacteria 4608
90 Ga0111539_10145806 3300009094 Bacteria 2772
91 Ga0111539_10413253 3300009094 Unclassified 1571
92 Ga0114129_10002024 3300009147 Bacteria 27802
93 Ga0114129_10244891 3300009147 Bacteria 2409
94 Ga0105248_10061742 3300009177 Bacteria 4209
95 Ga0105238_10000223 3300009551 Bacteria 62977
96 Ga0105249_10001663 3300009553 Bacteria 19494
97 Ga0105249_10006988 3300009553 Bacteria 9847
98 Ga0105249_10044803 3300009553 Bacteria 4022
99 Ga0157374_10043753 3300013296 Bacteria 4138
100 Ga0163162_10027796 3300013306 Bacteria 5595
101 Ga0157375_10132682 3300013308 Bacteria 2611
102 Ga0157375_10230593 3300013308 Bacteria 2011
103 Ga0163163_10183579 3300014325 Bacteria 2139
104 Ga0157377_10070728 3300014745 Unclassified 2016
105 Ga0157377_10159208 3300014745 Bacteria 1403
106 Ga0157379_10036623 3300014968 Unclassified 4374
107 Ga0157376_10312578 3300014969 Bacteria 1491
108 Ga0157376_10313652 3300014969 Unclassified 1488
109 Ga0163161_10003161 3300017792 Bacteria 11615
110 Ga0213875_10011307 3300021388 Bacteria 4444
111 Ga0207673_1002972 3300025290 Bacteria 1966
112 Ga0207697_10044206 3300025315 Bacteria 1832
113 Ga0207682_10063485 3300025893 Bacteria 1550
114 Ga0207688_10006082 3300025901 Bacteria 6566
115 Ga0207680_10207851 3300025903 Bacteria 1337
116 Ga0207645_10000280 3300025907 Bacteria 42395
117 Ga0207645_10031154 3300025907 Bacteria 3433
118 Ga0207643_10007615 3300025908 Bacteria 5817
119 Ga0207662_10003548 3300025918 Bacteria 8045
120 Ga0207662_10013535 3300025918 Bacteria 4563
121 Ga0207662_10054327 3300025918 Bacteria 2388
122 Ga0207649_10071839 3300025920 Bacteria 2212
123 Ga0207681_10030848 3300025923 Bacteria 3497
124 Ga0207681_10259457 3300025923 Bacteria 1360
125 Ga0207694_10000013 3300025924 Bacteria 384823
126 Ga0207650_10137425 3300025925 Bacteria 1918
127 Ga0207659_10000538 3300025926 Bacteria 22634
128 Ga0207659_10016889 3300025926 Bacteria 4759
129 Ga0207659_10150348 3300025926 Bacteria 1818
130 Ga0207659_10226285 3300025926 Bacteria 1506
131 Ga0207644_10044938 3300025931 Bacteria 3140
132 Ga0207644_10060765 3300025931 Bacteria 2735
133 Ga0207706_10000268 3300025933 Bacteria 56719
134 Ga0207706_10082452 3300025933 Unclassified 2826
135 Ga0207706_10095784 3300025933 Bacteria 2610
136 Ga0207706_10288148 3300025933 Bacteria 1432
137 Ga0207691_10032061 3300025940 Bacteria 4902
138 Ga0207691_10033469 3300025940 Bacteria 4785
139 Ga0207691_10108661 3300025940 Bacteria 2468
140 Ga0207691_10246051 3300025940 Bacteria 1545
141 Ga0207711_10053425 3300025941 Bacteria 3465
142 Ga0207689_10003723 3300025942 Bacteria 13899
143 Ga0207689_10079114 3300025942 Bacteria 2702
144 Ga0207679_10039557 3300025945 Bacteria 3369
145 Ga0207679_10049221 3300025945 Bacteria 3074
146 Ga0207679_10083345 3300025945 Bacteria 2450
147 Ga0207651_10029151 3300025960 Bacteria 3493
148 Ga0207651_10105462 3300025960 Bacteria 2102
149 Ga0207712_10001878 3300025961 Bacteria 13802
150 Ga0207712_10023808 3300025961 Bacteria 4046
151 Ga0207712_10088626 3300025961 Bacteria 2273
152 Ga0207668_10032992 3300025972 Unclassified 3428
153 Ga0207677_10016361 3300026023 Bacteria 4390
154 Ga0207677_10140971 3300026023 Bacteria 1845
155 Ga0207678_10037423 3300026067 Unclassified 4220
156 Ga0207708_10006160 3300026075 Bacteria 8889
157 Ga0207708_10051219 3300026075 Bacteria 3143
158 Ga0207708_10088506 3300026075 Bacteria 2385
159 Ga0207648_10016149 3300026089 Bacteria 6836
160 Ga0207676_10043100 3300026095 Unclassified 3472
161 Ga0207676_10063662 3300026095 Bacteria 2930
162 Ga0207676_10189146 3300026095 Unclassified 1810
163 Ga0207674_10030825 3300026116 Bacteria 5637
164 Ga0207675_100015515 3300026118 Bacteria 7105
165 Ga0207675_100118682 3300026118 Bacteria 2501
166 Ga0207683_10023648 3300026121 Bacteria 5286
167 Ga0209970_1015418 3300027614 Bacteria 1272
168 Ga0209974_10016723 3300027876 Bacteria 2434
169 Ga0207428_10003899 3300027907 Bacteria 14306
170 Ga0207428_10051494 3300027907 Bacteria 3291
171 Ga0207428_10060894 3300027907 Bacteria 2990
172 Ga0268265_10246817 3300028380 Bacteria 1579
173 Ga0307408_100010628 3300031548 Bacteria 6073
174 Ga0307408_100156565 3300031548 Bacteria 1805
175 Ga0307405_10006214 3300031731 Bacteria 5855
176 Ga0307405_10016295 3300031731 Bacteria 4049
177 Ga0307405_10071590 3300031731 Bacteria 2231
178 Ga0307413_10000842 3300031824 Bacteria 10778
179 Ga0307413_10032152 3300031824 Bacteria 2970
180 Ga0307410_10012165 3300031852 Bacteria 4960
181 Ga0307410_10037685 3300031852 Bacteria 3160
182 Ga0307410_10110138 3300031852 Bacteria 1991
183 Ga0307410_10129061 3300031852 Bacteria 1855
184 Ga0307410_10248120 3300031852 Bacteria 1383
185 Ga0307406_10040664 3300031901 Bacteria 2892
186 Ga0307406_10174819 3300031901 Bacteria 1558
187 Ga0307407_10001850 3300031903 Bacteria 7958
188 Ga0307407_10007840 3300031903 Bacteria 4861
189 Ga0307407_10008890 3300031903 Bacteria 4642
190 Ga0307407_10025609 3300031903 Bacteria 3111
191 Ga0307412_10026576 3300031911 Bacteria 3599
192 Ga0307412_10083457 3300031911 Bacteria 2215
193 Ga0307409_100002975 3300031995 Bacteria 9031
194 Ga0307409_100033705 3300031995 Bacteria 3729
195 Ga0307409_100071776 3300031995 Bacteria 2754
196 Ga0307409_100152476 3300031995 Bacteria 2008
197 Ga0307416_100015311 3300032002 Bacteria 5294
198 Ga0307416_100036465 3300032002 Bacteria 3771
199 Ga0307416_100077524 3300032002 Bacteria 2791
200 Ga0307416_100087550 3300032002 Bacteria 2659
201 Ga0307416_100089030 3300032002 Bacteria 2641
202 Ga0307416_100263749 3300032002 Bacteria 1686
203 Ga0307414_10048603 3300032004 Bacteria 2927
204 Ga0307414_10209779 3300032004 Bacteria 1591
205 Ga0307411_10001955 3300032005 Bacteria 8829
206 Ga0307411_10010525 3300032005 Bacteria 4936
207 Ga0307411_10028400 3300032005 Unclassified 3401
208 Ga0307411_10030721 3300032005 Bacteria 3296
209 Ga0307411_10187648 3300032005 Bacteria 1575
210 Ga0307415_100001786 3300032126 Bacteria 10532
211 Ga0307415_100010391 3300032126 Bacteria 5271
212 Ga0307415_100014682 3300032126 Bacteria 4613
213 Ga0307415_100063902 3300032126 Bacteria 2559
214 Ga0307415_100150261 3300032126 Bacteria 1792
215 Ga0316593_10049328 3300032168 Bacteria 1419
216 Ga0373959_0000372 3300034820 Bacteria 8906
217 Ga0373934_0026578 3300035086 Bacteria 2246
218 Ga0373923_0009447 3300035111 Bacteria 3519
219 Ga0373954_0021017 3300035118 Bacteria 2954
220 Ga0373957_0031572 3300035120 Bacteria 1947
221 Ga0373955_0087896 3300035172 Bacteria 1767
222 Ga0373961_0014590 3300035241 Unclassified 1997
223 Ga0373962_0005178 3300035242 Bacteria 3152
224 Ga0373924_0015825 3300035410 Bacteria 2873
225 Ga0373927_0048744 3300035695 Bacteria 2740
226 Ga0373937_0002585 3300036401 Bacteria 15054
227 Ga0395898_0173163 3300037466 Bacteria 2063
228 Ga0395905_0054624 3300037471 Bacteria 3737
229 Ga0436364_0389845 3300037853 Bacteria 18484
230 Ga0395901_0097674 3300038443 Bacteria 3079
231 Ga0439464_0027269 3300042439 Bacteria 1588
232 Ga0466969_0119964 3300044656 Bacteria 1225
233 Ga0466965_0017261 3300044683 Bacteria 3448
234 Ga0451576_0015217 3300045051 Bacteria 8532
235 Ga0495580_0008978 3300046472 Bacteria 7897
236 Ga0495583_0046438 3300046506 Bacteria 2002
237 Ga0495643_0000468 3300046522 Bacteria 51396
238 Ga0495643_0002937 3300046522 Bacteria 12915
239 Ga0495598_0026717 3300046537 Bacteria 1585
240 Ga0495656_0002762 3300046615 Bacteria 5868
241 Ga0495669_0035203 3300046684 Bacteria 2210
242 Ga0495615_0017911 3300048090 Unclassified 1551
243 Ga0501298_014026 3300049521 Bacteria 1427
244 Ga0501034_0447681 3300049571 Bacteria 1209
245 Ga0501043_0128317 3300049579 Bacteria 1988
246 Ga0501047_0021865 3300049581 Bacteria 6142
247 Ga0501047_0134318 3300049581 Bacteria 2354
248 Ga0501071_0184463 3300049587 Bacteria 1564
249 Ga0501249_033417 3300049679 Bacteria 1152
250 Ga0501259_003933 3300049688 Bacteria 2361
251 Ga0501035_0091483 3300049822 Bacteria 2678
252 Ga0501035_0147837 3300049822 Bacteria 2040
253 Ga0501044_0054602 3300049823 Bacteria 4105
254 Ga0501044_0086548 3300049823 Bacteria 3165
255 nmdc:mga0k408_24381_c1 3300050493 Bacteria 3419
256 nmdc:mga07m45_15344_c1 3300050496 Bacteria 2990
257 nmdc:mga05p37_68_c1 3300050507 Bacteria 91472
258 nmdc:mga09592_119640_c1 3300050508 Bacteria 2262
259 nmdc:mga09592_15401_c1 3300050508 Bacteria 6246
260 nmdc:mga09592_319618_c1 3300050508 Bacteria 1345
261 nmdc:mga09592_40724_c1 3300050508 Bacteria 3903
262 nmdc:mga0qj67_115493_c1 3300050509 Bacteria 2169
263 nmdc:mga0qj67_15361_c1 3300050509 Bacteria 5798
264 nmdc:mga0qj67_164147_c1 3300050509 Bacteria 1803
265 nmdc:mga0qj67_272015_c1 3300050509 Unclassified 1374
266 nmdc:mga06r32_20759_c1 3300050510 Bacteria 6051
267 nmdc:mga06r32_489279_c1 3300050510 Bacteria 1208
268 nmdc:mga08y16_19575_c1 3300050511 Bacteria 7136
269 nmdc:mga08y16_236128_c1 3300050511 Bacteria 1452
270 nmdc:mga08y16_24385_c1 3300050511 Bacteria 6384
271 nmdc:mga08y16_35288_c1 3300050511 Bacteria 5252
272 nmdc:mga0n895_15665_c1 3300050512 Bacteria 6924
273 nmdc:mga0a205_126609_c1 3300050515 Bacteria 2454
274 nmdc:mga0a205_19023_c1 3300050515 Bacteria 6471
275 Ga0500628_000104 3300053129 Bacteria 17857
276 Ga0500568_0005068 3300053139 Bacteria 6897
277 Ga0590071_031120 3300059421 Bacteria 1272
278 Ga0501033_0072408
279 JGI24746J21847_1001880
280 JGI25406J46586_10016242
281 Ga0065712_10068132
282 Ga0065712_10114882
283 Ga0065715_10015631
284 Ga0065715_10158609
285 Ga0065707_10002750
286 Ga0065707_10084152
287 Ga0070690_100031936
288 Ga0070670_100231950
289 Ga0070677_10002756
290 Ga0070677_10015971
291 Ga0068869_100017214
292 Ga0070666_10286816
293 Ga0070687_100012289
294 Ga0070687_100040137
295 Ga0070661_100059673
296 Ga0070661_100091922
297 Ga0070668_100018561
298 Ga0070669_100001085
299 Ga0070669_100021013
300 Ga0070675_100034956
301 Ga0070675_100098010
302 Ga0070671_100058500
303 Ga0070671_100142730
304 Ga0070673_100017869
305 Ga0070659_100205324
306 Ga0070694_100089557
307 Ga0070663_100106459
308 Ga0070678_100153178
309 Ga0070662_100000205
310 Ga0070662_100117738
311 Ga0068867_100095668
312 Ga0070685_10001352
313 Ga0070685_10002962
314 Ga0070685_10006964
315 Ga0070699_100115069
316 Ga0070672_100005529
317 Ga0070672_100121678
318 Ga0070686_100000078
319 Ga0070686_100032575
320 Ga0070665_100086322
321 Ga0070664_100025135
322 Ga0070664_100134008
323 Ga0070664_100228240
324 Ga0068857_100064296
325 Ga0070702_100048621
326 Ga0068859_100039894
327 Ga0068859_100430929
328 Ga0068864_100051161
329 Ga0068864_100302538
330 Ga0068861_100069211
331 Ga0068861_100217664
332 Ga0068863_100004805
333 Ga0068863_100265857
334 Ga0068858_100045805
335 Ga0068860_100004416
336 Ga0068862_100001140
337 Ga0068862_100377353
338 Ga0068862_100396241
339 Ga0081539_10001115
340 Ga0081539_10007290
341 Ga0075367_10007882
342 Ga0075366_10005449
343 Ga0075428_100010122
344 Ga0075428_100015604
345 Ga0075428_100048761
346 Ga0075428_100298231
347 Ga0075430_100002950
348 Ga0075430_100031153
349 Ga0075430_100057926
350 Ga0075430_100059492
351 Ga0075431_100001203
352 Ga0075431_100026848
353 Ga0075433_10002442
354 Ga0075434_100007286
355 Ga0075429_100000982
356 Ga0075429_100017600
357 Ga0075429_100029544
358 Ga0075429_100030483
359 Ga0068865_100051612
360 Ga0097620_100039893
361 Ga0097620_100430918
362 Ga0111539_10002586
363 Ga0111539_10004982
364 Ga0111539_10014615
365 Ga0111539_10027790
366 Ga0111539_10057739
367 Ga0111539_10145806
368 Ga0111539_10413253
369 Ga0114129_10002024
370 Ga0114129_10244891
371 Ga0105248_10061742
372 Ga0105238_10000223
373 Ga0105249_10001663
374 Ga0105249_10006988
375 Ga0105249_10044803
376 Ga0157374_10043753
377 Ga0163162_10027796
378 Ga0157375_10132682
379 Ga0157375_10230593
380 Ga0163163_10183579
381 Ga0157377_10070728
382 Ga0157377_10159208
383 Ga0157379_10036623
384 Ga0157376_10312578
385 Ga0157376_10313652
386 Ga0163161_10003161
387 Ga0213875_10011307
388 Ga0207673_1002972
389 Ga0207697_10044206
390 Ga0207682_10063485
391 Ga0207688_10006082
392 Ga0207680_10207851
393 Ga0207645_10000280
394 Ga0207645_10031154
395 Ga0207643_10007615
396 Ga0207662_10003548
397 Ga0207662_10013535
398 Ga0207662_10054327
399 Ga0207649_10071839
400 Ga0207681_10030848
401 Ga0207681_10259457
402 Ga0207694_10000013
403 Ga0207650_10137425
404 Ga0207659_10000538
405 Ga0207659_10016889
406 Ga0207659_10150348
407 Ga0207659_10226285
408 Ga0207644_10044938
409 Ga0207644_10060765
410 Ga0207706_10000268
411 Ga0207706_10082452
412 Ga0207706_10095784
413 Ga0207706_10288148
414 Ga0207691_10032061
415 Ga0207691_10033469
416 Ga0207691_10108661
417 Ga0207691_10246051
418 Ga0207711_10053425
419 Ga0207689_10003723
420 Ga0207689_10079114
421 Ga0207679_10039557
422 Ga0207679_10049221
423 Ga0207679_10083345
424 Ga0207651_10029151
425 Ga0207651_10105462
426 Ga0207712_10001878
427 Ga0207712_10023808
428 Ga0207712_10088626
429 Ga0207668_10032992
430 Ga0207677_10016361
431 Ga0207677_10140971
432 Ga0207678_10037423
433 Ga0207708_10006160
434 Ga0207708_10051219
435 Ga0207708_10088506
436 Ga0207648_10016149
437 Ga0207676_10043100
438 Ga0207676_10063662
439 Ga0207676_10189146
440 Ga0207674_10030825
441 Ga0207675_100015515
442 Ga0207675_100118682
443 Ga0207683_10023648
444 Ga0209970_1015418
445 Ga0209974_10016723
446 Ga0207428_10003899
447 Ga0207428_10051494
448 Ga0207428_10060894
449 Ga0268265_10246817
450 Ga0307408_100010628
451 Ga0307408_100156565
452 Ga0307405_10006214
453 Ga0307405_10016295
454 Ga0307405_10071590
455 Ga0307413_10000842
456 Ga0307413_10032152
457 Ga0307410_10012165
458 Ga0307410_10037685
459 Ga0307410_10110138
460 Ga0307410_10129061
461 Ga0307410_10248120
462 Ga0307406_10040664
463 Ga0307406_10174819
464 Ga0307407_10001850
465 Ga0307407_10007840
466 Ga0307407_10008890
467 Ga0307407_10025609
468 Ga0307412_10026576
469 Ga0307412_10083457
470 Ga0307409_100002975
471 Ga0307409_100033705
472 Ga0307409_100071776
473 Ga0307409_100152476
474 Ga0307416_100015311
475 Ga0307416_100036465
476 Ga0307416_100077524
477 Ga0307416_100087550
478 Ga0307416_100089030
479 Ga0307416_100263749
480 Ga0307414_10048603
481 Ga0307414_10209779
482 Ga0307411_10001955
483 Ga0307411_10010525
484 Ga0307411_10028400
485 Ga0307411_10030721
486 Ga0307411_10187648
487 Ga0307415_100001786
488 Ga0307415_100010391
489 Ga0307415_100014682
490 Ga0307415_100063902
491 Ga0307415_100150261
492 Ga0316593_10049328
493 Ga0373959_0000372
494 Ga0373934_0026578
495 Ga0373923_0009447
496 Ga0373954_0021017
497 Ga0373957_0031572
498 Ga0373955_0087896
499 Ga0373961_0014590
500 Ga0373962_0005178
501 Ga0373924_0015825
502 Ga0373927_0048744
503 Ga0373937_0002585
504 Ga0395898_0173163
505 Ga0395905_0054624
506 Ga0436364_0389845
507 Ga0395901_0097674
508 Ga0439464_0027269
509 Ga0466969_0119964
510 Ga0466965_0017261
511 Ga0451576_0015217
512 Ga0495580_0008978
513 Ga0495583_0046438
514 Ga0495643_0000468
515 Ga0495643_0002937
516 Ga0495598_0026717
517 Ga0495656_0002762
518 Ga0495669_0035203
519 Ga0495615_0017911
520 Ga0501298_014026
521 Ga0501034_0447681
522 Ga0501043_0128317
523 Ga0501047_0021865
524 Ga0501047_0134318
525 Ga0501071_0184463
526 Ga0501249_033417
527 Ga0501259_003933
528 Ga0501035_0091483
529 Ga0501035_0147837
530 Ga0501044_0054602
531 Ga0501044_0086548
532 nmdc:mga0k408_24381_c1
533 nmdc:mga07m45_15344_c1
534 nmdc:mga05p37_68_c1
535 nmdc:mga09592_119640_c1
536 nmdc:mga09592_15401_c1
537 nmdc:mga09592_319618_c1
538 nmdc:mga09592_40724_c1
539 nmdc:mga0qj67_115493_c1
540 nmdc:mga0qj67_15361_c1
541 nmdc:mga0qj67_164147_c1
542 nmdc:mga0qj67_272015_c1
543 nmdc:mga06r32_20759_c1
544 nmdc:mga06r32_489279_c1
545 nmdc:mga08y16_19575_c1
546 nmdc:mga08y16_236128_c1
547 nmdc:mga08y16_24385_c1
548 nmdc:mga08y16_35288_c1
549 nmdc:mga0n895_15665_c1
550 nmdc:mga0a205_126609_c1
551 nmdc:mga0a205_19023_c1
552 Ga0500628_000104
553 Ga0500568_0005068
554 Ga0590071_031120

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01699

Na_Ca_ex

Sodium/calcium exchanger protein

56

212

0.88

PF01699

Na_Ca_ex

Sodium/calcium exchanger protein

239

385

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kjs-assembly1.cif.gz_A structure of native yfke 0.9364 6 348
4kjs-assembly1.cif.gz_A structure of native yfke 0.9307 6 348
4kjs-assembly2.cif.gz_B structure of native yfke 0.9302 6 348
4kjs-assembly2.cif.gz_B structure of native yfke 0.9218 6 348
4kjr-assembly2.cif.gz_B crystal structure of selenium substituted ca2+/h+ antiporter proteinyfke 0.919 5 348
ID Description Score Start End Superfamily
af_C6KSN3_150_437_1.20.1420.30 Mainly Alpha;Up-down Bundle;A middle domain of Talin 1;NCX, central ion-binding region 0.9081 62 346 1.20.1420.30
af_O59768_113_408_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9066 59 346 3.30.360.10
af_C6KSN3_150_437_1.20.1420.30 Mainly Alpha;Up-down Bundle;A middle domain of Talin 1;NCX, central ion-binding region 0.8963 62 346 1.20.1420.30
af_O59768_113_408_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.8806 59 346 3.30.360.10
af_Q769E5_118_423_1.20.1420.30 Mainly Alpha;Up-down Bundle;A middle domain of Talin 1;NCX, central ion-binding region 0.8662 61 346 1.20.1420.30
ID Description Score Start End GO Terms
AF-A0A1P8QR35-F1-model_v4 deleted 0.9358 5 351
AF-A0A2V7U0J0-F1-model_v4 Ca(2+)/H(+) antiporter 0.9304 8 348 GO:0006874
GO:0012505
GO:0015369
GO:0016020
AF-A0A0L1M6J5-F1-model_v4 deleted 0.9302 2 348
AF-A0A7J2Y7B0-F1-model_v4 Calcium/proton exchanger 0.9297 66 352 GO:0006874
GO:0012505
GO:0015369
GO:0016020
AF-A0A0M8K748-F1-model_v4 Ca(2+)/H(+) antiporter 0.929 10 349 GO:0006874
GO:0012505
GO:0015369
GO:0016020

Map