F382435

General Info

Members Datasets Scaffolds Average Seq Length
278 147 556 607

Family's Representative Sequence

Representative Sequence 3300025932|Ga0207690_10019213|Ga0207690_100192132
Length 638
Sequence MIVRASEHRERATPTERAGEAASESACRGSAGRGPQIEDVLSRYWGYTSFRPLQREAMDAILAGRDSVVVLPTGGGKSLCFQAPAVVMGGVALVVSPLISLMKDQVDSLAESGVAAACYNSALSADERSAVTAGIRDRRYSLVYVSPERLAGDAAEWFFSILGRPSFVAIDEAHCISQWGHDFRPEYRQLGLLRQRFPGVSLHAFTATATARVRSDIRTQLELSNAAELVGSFDRSNLVYRVLPRSSLKRQLQDVLGRHRGEAGIVYCSSRREVEGLAAWLKENGIRALPYHAGLPDAERHRNQDAFLNEDVDVVVATVAFGMGIDRSDVRFVVHAGAPQSLEHYQQESGRAGRDGLAAECVLIYSGADFLRWRMMLEKNGELTPARRALLRDMERYAGSVGCRHARLVRHFGQDYAADACAACDYCLGELESVGRPVEIARKVLSCVARVGQRFGAAHVANVLCGSESEQVRSRGHDRLTTFGLLRDAPVAEVRGYIEQLTAEGLLCQIGDEYPVLTLTAEGISLLKDAGARPDFTLARQRRPTKDRGPARSRVDIEGWDGVDRELFDRLRRVRLDIAHGRGVPPYVICHDTTLRELARVKPTSLAALVGVYGIGARKAESFGPAFVDEIRAHLSLG

Samples

Sample ID Description Type Environment
1 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
70 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
71 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
79 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
80 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
81 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
84 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
85 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
86 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
90 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
91 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
92 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
93 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
94 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
95 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
96 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
97 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
98 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
114 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
115 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
116 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
117 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
118 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
121 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
122 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
123 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
124 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
131 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
132 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
133 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
134 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
145 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
146 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.32
Nodule 0
Rhizoplane 3.24
Rhizosphere 92.45
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207690_10019213 3300025932 Bacteria 4202
2 Ga0065712_10001235 3300005290 Bacteria 11731
3 Ga0065712_10068473 3300005290 Bacteria 10415
4 Ga0065715_10005192 3300005293 Bacteria 5054
5 Ga0065707_10098293 3300005295 Bacteria 3097
6 Ga0070683_100013567 3300005329 Bacteria 7109
7 Ga0070683_100024856 3300005329 Bacteria 5371
8 Ga0070690_100012218 3300005330 Bacteria 5048
9 Ga0070670_100011581 3300005331 Bacteria 7538
10 Ga0070670_100015980 3300005331 Bacteria 6441
11 Ga0070661_100003032 3300005344 Bacteria 11552
12 Ga0070669_100055722 3300005353 Bacteria 2897
13 Ga0070675_100000265 3300005354 Bacteria 34434
14 Ga0070675_100004986 3300005354 Bacteria 10135
15 Ga0070675_100011065 3300005354 Bacteria 7062
16 Ga0070675_100115026 3300005354 Bacteria 2280
17 Ga0070674_100074003 3300005356 Bacteria 2416
18 Ga0070673_100009832 3300005364 Bacteria 6443
19 Ga0070673_100047799 3300005364 Bacteria 3332
20 Ga0070694_100001096 3300005444 Bacteria 15510
21 Ga0070678_100042715 3300005456 Bacteria 3225
22 Ga0070706_100058652 3300005467 Bacteria 3552
23 Ga0070707_100004048 3300005468 Bacteria 13782
24 Ga0070698_100026926 3300005471 Bacteria 5979
25 Ga0070699_100013285 3300005518 Bacteria 7101
26 Ga0070684_100000380 3300005535 Bacteria 30791
27 Ga0070696_100033091 3300005546 Bacteria 3550
28 Ga0070696_100070917 3300005546 Bacteria 2451
29 Ga0070664_100000533 3300005564 Bacteria 29057
30 Ga0070664_100031358 3300005564 Bacteria 4440
31 Ga0068857_100135878 3300005577 Bacteria 2220
32 Ga0068859_100018643 3300005617 Bacteria 6976
33 Ga0068861_100110527 3300005719 Bacteria 2201
34 Ga0068870_10049801 3300005840 Bacteria 2211
35 Ga0075364_10092881 3300006051 Bacteria 2003
36 Ga0075362_10032990 3300006177 Bacteria 2250
37 Ga0075367_10000899 3300006178 Bacteria 11989
38 Ga0075367_10008346 3300006178 Bacteria 5366
39 Ga0075367_10022909 3300006178 Bacteria 3509
40 Ga0075366_10001185 3300006195 Bacteria 12940
41 Ga0097621_100002228 3300006237 Bacteria 13279
42 Ga0075428_100002973 3300006844 Bacteria 18472
43 Ga0075428_100009949 3300006844 Bacteria 10564
44 Ga0075428_100020982 3300006844 Bacteria 7236
45 Ga0075428_100037740 3300006844 Bacteria 5316
46 Ga0075428_100073061 3300006844 Bacteria 3745
47 Ga0075430_100001299 3300006846 Bacteria 20144
48 Ga0075430_100019512 3300006846 Bacteria 5766
49 Ga0075430_100022780 3300006846 Bacteria 5327
50 Ga0075431_100003039 3300006847 Bacteria 16229
51 Ga0075431_100004016 3300006847 Bacteria 14342
52 Ga0075431_100008063 3300006847 Bacteria 10510
53 Ga0075431_100078240 3300006847 Bacteria 3414
54 Ga0075434_100006981 3300006871 Bacteria 10409
55 Ga0075434_100021222 3300006871 Bacteria 6312
56 Ga0075434_100057972 3300006871 Bacteria 3849
57 Ga0075429_100007810 3300006880 Bacteria 9291
58 Ga0075429_100017399 3300006880 Bacteria 6214
59 Ga0075429_100040344 3300006880 Bacteria 4064
60 Ga0068865_100042202 3300006881 Bacteria 3110
61 Ga0097620_100018643 3300006931 Bacteria 6976
62 Ga0075435_100004224 3300007076 Bacteria 9863
63 Ga0075435_100007997 3300007076 Bacteria 7569
64 Ga0111539_10000150 3300009094 Bacteria 79163
65 Ga0111539_10000301 3300009094 Bacteria 59888
66 Ga0111539_10003347 3300009094 Bacteria 21180
67 Ga0111539_10006576 3300009094 Bacteria 14981
68 Ga0111539_10036115 3300009094 Bacteria 5978
69 Ga0111539_10043157 3300009094 Bacteria 5407
70 Ga0111539_10061579 3300009094 Bacteria 4445
71 Ga0111539_10185247 3300009094 Bacteria 2431
72 Ga0114129_10004414 3300009147 Bacteria 19851
73 Ga0114129_10006643 3300009147 Bacteria 16424
74 Ga0114129_10011563 3300009147 Bacteria 12569
75 Ga0114129_10021643 3300009147 Bacteria 9125
76 Ga0114129_10035123 3300009147 Bacteria 7083
77 Ga0114129_10037147 3300009147 Bacteria 6877
78 Ga0114129_10050607 3300009147 Bacteria 5835
79 Ga0114129_10080256 3300009147 Bacteria 4535
80 Ga0114129_10168320 3300009147 Bacteria 2989
81 Ga0114129_10207095 3300009147 Bacteria 2653
82 Ga0105248_10008207 3300009177 Bacteria 11474
83 Ga0105248_10037202 3300009177 Bacteria 5444
84 Ga0105248_10057531 3300009177 Bacteria 4365
85 Ga0163162_10052866 3300013306 Bacteria 4081
86 Ga0163163_10000001 3300014325 Bacteria 622185
87 Ga0163163_10017851 3300014325 Bacteria 6624
88 Ga0157380_10002385 3300014326 Bacteria 12632
89 Ga0157377_10046581 3300014745 Bacteria 2426
90 Ga0207697_10013452 3300025315 Bacteria 3414
91 Ga0207643_10064921 3300025908 Bacteria 2090
92 Ga0207662_10010643 3300025918 Bacteria 5086
93 Ga0207657_10100546 3300025919 Bacteria 2401
94 Ga0207646_10022713 3300025922 Bacteria 5772
95 Ga0207681_10061121 3300025923 Bacteria 2589
96 Ga0207650_10006362 3300025925 Bacteria 8043
97 Ga0207650_10016071 3300025925 Bacteria 5224
98 Ga0207650_10045181 3300025925 Bacteria 3240
99 Ga0207659_10000508 3300025926 Bacteria 23347
100 Ga0207706_10029633 3300025933 Bacteria 4885
101 Ga0207669_10030484 3300025937 Bacteria 2997
102 Ga0207711_10017174 3300025941 Bacteria 6013
103 Ga0207711_10028631 3300025941 Bacteria 4690
104 Ga0207711_10028897 3300025941 Bacteria 4671
105 Ga0207689_10005451 3300025942 Bacteria 11385
106 Ga0207689_10018349 3300025942 Bacteria 5903
107 Ga0207661_10011719 3300025944 Bacteria 6363
108 Ga0207661_10038664 3300025944 Bacteria 3741
109 Ga0207679_10010107 3300025945 Bacteria 6066
110 Ga0207651_10024875 3300025960 Bacteria 3712
111 Ga0207708_10024319 3300026075 Bacteria 4582
112 Ga0207708_10050041 3300026075 Bacteria 3181
113 Ga0207648_10028921 3300026089 Bacteria 4913
114 Ga0207674_10113123 3300026116 Bacteria 2687
115 Ga0207675_100023926 3300026118 Bacteria 5680
116 Ga0207683_10051826 3300026121 Bacteria 3595
117 Ga0207428_10001499 3300027907 Bacteria 24414
118 Ga0207428_10006100 3300027907 Bacteria 11141
119 Ga0207428_10006136 3300027907 Bacteria 11098
120 Ga0207428_10026856 3300027907 Bacteria 4797
121 Ga0307408_100012792 3300031548 Bacteria 5565
122 Ga0265314_10009647 3300031711 Bacteria 8130
123 Ga0307405_10044938 3300031731 Bacteria 2703
124 Ga0307410_10060948 3300031852 Bacteria 2581
125 Ga0307406_10043612 3300031901 Bacteria 2806
126 Ga0307407_10015523 3300031903 Bacteria 3769
127 Ga0307409_100020246 3300031995 Bacteria 4530
128 Ga0307416_100054910 3300032002 Bacteria 3204
129 Ga0307416_100080187 3300032002 Bacteria 2754
130 Ga0307414_10063098 3300032004 Bacteria 2632
131 Ga0307411_10009517 3300032005 Bacteria 5114
132 Ga0307411_10027354 3300032005 Bacteria 3449
133 Ga0307411_10072698 3300032005 Bacteria 2336
134 Ga0307415_100011190 3300032126 Bacteria 5120
135 Ga0373934_0000709 3300035086 Bacteria 11895
136 Ga0373956_0003436 3300035119 Bacteria 6378
137 Ga0373955_0008877 3300035172 Bacteria 4688
138 Ga0373933_0008229 3300035724 Bacteria 5691
139 Ga0373937_0036079 3300036401 Bacteria 4504
140 Ga0373937_0040449 3300036401 Bacteria 4249
141 Ga0373925_0011729 3300037068 Bacteria 6338
142 Ga0439433_0008881 3300041999 Bacteria 2186
143 Ga0439435_0001248 3300042436 Bacteria 4616
144 Ga0439435_0007487 3300042436 Bacteria 2499
145 Ga0439464_0001942 3300042439 Bacteria 5004
146 Ga0453684_0078592 3300044712 Bacteria 4128
147 Ga0451576_0135845 3300045051 Bacteria 2564
148 Ga0495586_0026167 3300046535 Bacteria 3122
149 Ga0495621_0007411 3300046539 Bacteria 3248
150 Ga0496104_0021139 3300048907 Bacteria 5971
151 Ga0496105_0022542 3300048908 Bacteria 5101
152 Ga0496106_0069629 3300048909 Bacteria 2686
153 Ga0496108_0008652 3300048911 Bacteria 8257
154 Ga0496109_0003803 3300048912 Bacteria 12597
155 Ga0496109_0031072 3300048912 Bacteria 4790
156 Ga0496110_0004326 3300048913 Bacteria 10991
157 Ga0496112_0006951 3300048915 Bacteria 9989
158 Ga0496113_0071454 3300048916 Bacteria 2640
159 Ga0501031_0083704 3300049568 Bacteria 2079
160 Ga0501032_0002067 3300049569 Bacteria 15838
161 Ga0501033_0033301 3300049570 Bacteria 3868
162 Ga0501033_0096579 3300049570 Bacteria 2159
163 Ga0501033_0109661 3300049570 Bacteria 2009
164 Ga0501034_0004512 3300049571 Bacteria 15476
165 Ga0501034_0018988 3300049571 Bacteria 7041
166 Ga0501034_0043864 3300049571 Bacteria 4523
167 Ga0501036_0001138 3300049572 Bacteria 20220
168 Ga0501037_0008493 3300049573 Bacteria 7529
169 Ga0501037_0068794 3300049573 Bacteria 2578
170 Ga0501038_0002121 3300049574 Bacteria 18409
171 Ga0501039_0043065 3300049575 Bacteria 3488
172 Ga0501040_0036471 3300049576 Bacteria 3338
173 Ga0501040_0059515 3300049576 Bacteria 2624
174 Ga0501042_0001141 3300049578 Bacteria 15333
175 Ga0501042_0041757 3300049578 Bacteria 3263
176 Ga0501042_0052509 3300049578 Bacteria 2907
177 Ga0501042_0070940 3300049578 Bacteria 2492
178 Ga0501043_0015344 3300049579 Bacteria 6000
179 Ga0501043_0023590 3300049579 Bacteria 4825
180 Ga0501043_0026223 3300049579 Bacteria 4572
181 Ga0501046_0004690 3300049580 Bacteria 12339
182 Ga0501046_0007714 3300049580 Bacteria 9434
183 Ga0501046_0019964 3300049580 Bacteria 5547
184 Ga0501047_0003758 3300049581 Bacteria 14298
185 Ga0501047_0072581 3300049581 Bacteria 3313
186 Ga0501048_0015223 3300049582 Bacteria 5682
187 Ga0501048_0028620 3300049582 Bacteria 4045
188 Ga0501048_0059373 3300049582 Bacteria 2711
189 Ga0501067_0003815 3300049583 Bacteria 8315
190 Ga0501068_0007955 3300049584 Bacteria 5876
191 Ga0501069_0026487 3300049585 Bacteria 3175
192 Ga0501070_0000530 3300049586 Bacteria 35045
193 Ga0501071_0010896 3300049587 Bacteria 6102
194 Ga0501071_0055184 3300049587 Bacteria 2868
195 Ga0501071_0082882 3300049587 Bacteria 2349
196 Ga0501072_0018138 3300049588 Bacteria 5413
197 Ga0501073_0003665 3300049589 Bacteria 11539
198 Ga0501073_0028712 3300049589 Bacteria 3974
199 Ga0501073_0033271 3300049589 Bacteria 3671
200 Ga0501073_0050012 3300049589 Bacteria 2930
201 Ga0501073_0053412 3300049589 Bacteria 2828
202 Ga0501074_0009500 3300049590 Bacteria 7063
203 Ga0501074_0079842 3300049590 Bacteria 2348
204 Ga0501075_0014634 3300049591 Bacteria 5622
205 Ga0501075_0016942 3300049591 Bacteria 5255
206 Ga0501075_0038592 3300049591 Bacteria 3571
207 Ga0501075_0050366 3300049591 Bacteria 3131
208 Ga0501075_0114025 3300049591 Bacteria 2055
209 Ga0501075_0136811 3300049591 Bacteria 1866
210 Ga0501076_0004338 3300049592 Bacteria 10066
211 Ga0501076_0033607 3300049592 Bacteria 4005
212 Ga0501076_0035606 3300049592 Bacteria 3895
213 Ga0501076_0087483 3300049592 Bacteria 2505
214 Ga0501076_0180626 3300049592 Bacteria 1720
215 Ga0501077_0016483 3300049593 Bacteria 4656
216 Ga0501077_0054282 3300049593 Bacteria 2545
217 Ga0501217_007456 3300049661 Bacteria 2346
218 Ga0501079_0016643 3300049741 Bacteria 5616
219 Ga0501079_0017823 3300049741 Bacteria 5424
220 Ga0501079_0019420 3300049741 Bacteria 5190
221 Ga0501080_0001466 3300049742 Bacteria 19854
222 Ga0501080_0062502 3300049742 Bacteria 3466
223 Ga0501080_0071466 3300049742 Bacteria 3228
224 Ga0501081_0017250 3300049743 Bacteria 4777
225 Ga0501081_0018290 3300049743 Bacteria 4651
226 Ga0501083_0018613 3300049744 Bacteria 4839
227 Ga0501083_0018750 3300049744 Bacteria 4818
228 Ga0501083_0077875 3300049744 Bacteria 2199
229 Ga0501044_0077679 3300049823 Bacteria 3366
230 Ga0501045_0008262 3300049824 Bacteria 7248
231 Ga0501045_0013745 3300049824 Bacteria 5724
232 nmdc:mga03683_4160_c1 3300050489 Bacteria 4762
233 nmdc:mga00v17_11086_c2 3300050491 Bacteria 1999
234 nmdc:mga00v17_8848_c1 3300050491 Bacteria 5428
235 nmdc:mga0k408_43223_c1 3300050493 Bacteria 2596
236 nmdc:mga06z11_24291_c1 3300050494 Bacteria 2857
237 nmdc:mga05p37_108318_c1 3300050507 Bacteria 3418
238 nmdc:mga05p37_18646_c1 3300050507 Bacteria 8386
239 nmdc:mga05p37_24952_c1 3300050507 Bacteria 7267
240 nmdc:mga05p37_26309_c1 3300050507 Bacteria 7077
241 nmdc:mga05p37_48466_c1 3300050507 Bacteria 5225
242 nmdc:mga05p37_89294_c1 3300050507 Bacteria 3798
243 nmdc:mga09592_30508_c1 3300050508 Bacteria 4486
244 nmdc:mga09592_5942_c1 3300050508 Bacteria 9949
245 nmdc:mga0qj67_107670_c1 3300050509 Bacteria 2248
246 nmdc:mga0qj67_14690_c1 3300050509 Bacteria 5920
247 nmdc:mga0qj67_32847_c1 3300050509 Bacteria 4048
248 nmdc:mga06r32_13279_c1 3300050510 Bacteria 7458
249 nmdc:mga06r32_22825_c1 3300050510 Bacteria 5788
250 nmdc:mga06r32_24138_c1 3300050510 Bacteria 5639
251 nmdc:mga06r32_30316_c1 3300050510 Bacteria 5075
252 nmdc:mga06r32_40565_c1 3300050510 Bacteria 4420
253 nmdc:mga06r32_72991_c1 3300050510 Bacteria 3323
254 nmdc:mga06r32_7323_c1 3300050510 Bacteria 9934
255 nmdc:mga08y16_11768_c1 3300050511 Bacteria 9192
256 nmdc:mga08y16_18916_c1 3300050511 Bacteria 7253
257 nmdc:mga08y16_1935_c1 3300050511 Bacteria 21129
258 nmdc:mga08y16_235_c1 3300050511 Bacteria 48485
259 nmdc:mga08y16_27789_c1 3300050511 Bacteria 5962
260 nmdc:mga08y16_48499_c1 3300050511 Bacteria 4445
261 nmdc:mga0n895_16772_c1 3300050512 Bacteria 6731
262 nmdc:mga0n895_195073_c1 3300050512 Bacteria 2056
263 nmdc:mga0a205_24513_c1 3300050515 Bacteria 5739
264 Ga0500641_0004947 3300053096 Bacteria 4725
265 Ga0501084_0007080 3300054114 Bacteria 9238
266 Ga0501084_0008017 3300054114 Bacteria 8696
267 Ga0501084_0025066 3300054114 Bacteria 4976
268 Ga0501084_0042787 3300054114 Bacteria 3789
269 Ga0501084_0048445 3300054114 Bacteria 3557
270 Ga0590074_001798 3300059423 Bacteria 3504
271 Ga0590075_000377 3300059424 Bacteria 12224
272 Ga0590075_000467 3300059424 Bacteria 10879
273 Ga0590075_002935 3300059424 Bacteria 4057
274 Ga0590077_000574 3300059426 Bacteria 10158
275 Ga0590077_002703 3300059426 Bacteria 3740
276 Ga0501082_0029300 3300060353 Bacteria 4741
277 Ga0501082_0073671 3300060353 Bacteria 2941
278 Ga0501082_0103082 3300060353 Bacteria 2468
279 Ga0207690_10019213
280 Ga0065712_10001235
281 Ga0065712_10068473
282 Ga0065715_10005192
283 Ga0065707_10098293
284 Ga0070683_100013567
285 Ga0070683_100024856
286 Ga0070690_100012218
287 Ga0070670_100011581
288 Ga0070670_100015980
289 Ga0070661_100003032
290 Ga0070669_100055722
291 Ga0070675_100000265
292 Ga0070675_100004986
293 Ga0070675_100011065
294 Ga0070675_100115026
295 Ga0070674_100074003
296 Ga0070673_100009832
297 Ga0070673_100047799
298 Ga0070694_100001096
299 Ga0070678_100042715
300 Ga0070706_100058652
301 Ga0070707_100004048
302 Ga0070698_100026926
303 Ga0070699_100013285
304 Ga0070684_100000380
305 Ga0070696_100033091
306 Ga0070696_100070917
307 Ga0070664_100000533
308 Ga0070664_100031358
309 Ga0068857_100135878
310 Ga0068859_100018643
311 Ga0068861_100110527
312 Ga0068870_10049801
313 Ga0075364_10092881
314 Ga0075362_10032990
315 Ga0075367_10000899
316 Ga0075367_10008346
317 Ga0075367_10022909
318 Ga0075366_10001185
319 Ga0097621_100002228
320 Ga0075428_100002973
321 Ga0075428_100009949
322 Ga0075428_100020982
323 Ga0075428_100037740
324 Ga0075428_100073061
325 Ga0075430_100001299
326 Ga0075430_100019512
327 Ga0075430_100022780
328 Ga0075431_100003039
329 Ga0075431_100004016
330 Ga0075431_100008063
331 Ga0075431_100078240
332 Ga0075434_100006981
333 Ga0075434_100021222
334 Ga0075434_100057972
335 Ga0075429_100007810
336 Ga0075429_100017399
337 Ga0075429_100040344
338 Ga0068865_100042202
339 Ga0097620_100018643
340 Ga0075435_100004224
341 Ga0075435_100007997
342 Ga0111539_10000150
343 Ga0111539_10000301
344 Ga0111539_10003347
345 Ga0111539_10006576
346 Ga0111539_10036115
347 Ga0111539_10043157
348 Ga0111539_10061579
349 Ga0111539_10185247
350 Ga0114129_10004414
351 Ga0114129_10006643
352 Ga0114129_10011563
353 Ga0114129_10021643
354 Ga0114129_10035123
355 Ga0114129_10037147
356 Ga0114129_10050607
357 Ga0114129_10080256
358 Ga0114129_10168320
359 Ga0114129_10207095
360 Ga0105248_10008207
361 Ga0105248_10037202
362 Ga0105248_10057531
363 Ga0163162_10052866
364 Ga0163163_10000001
365 Ga0163163_10017851
366 Ga0157380_10002385
367 Ga0157377_10046581
368 Ga0207697_10013452
369 Ga0207643_10064921
370 Ga0207662_10010643
371 Ga0207657_10100546
372 Ga0207646_10022713
373 Ga0207681_10061121
374 Ga0207650_10006362
375 Ga0207650_10016071
376 Ga0207650_10045181
377 Ga0207659_10000508
378 Ga0207706_10029633
379 Ga0207669_10030484
380 Ga0207711_10017174
381 Ga0207711_10028631
382 Ga0207711_10028897
383 Ga0207689_10005451
384 Ga0207689_10018349
385 Ga0207661_10011719
386 Ga0207661_10038664
387 Ga0207679_10010107
388 Ga0207651_10024875
389 Ga0207708_10024319
390 Ga0207708_10050041
391 Ga0207648_10028921
392 Ga0207674_10113123
393 Ga0207675_100023926
394 Ga0207683_10051826
395 Ga0207428_10001499
396 Ga0207428_10006100
397 Ga0207428_10006136
398 Ga0207428_10026856
399 Ga0307408_100012792
400 Ga0265314_10009647
401 Ga0307405_10044938
402 Ga0307410_10060948
403 Ga0307406_10043612
404 Ga0307407_10015523
405 Ga0307409_100020246
406 Ga0307416_100054910
407 Ga0307416_100080187
408 Ga0307414_10063098
409 Ga0307411_10009517
410 Ga0307411_10027354
411 Ga0307411_10072698
412 Ga0307415_100011190
413 Ga0373934_0000709
414 Ga0373956_0003436
415 Ga0373955_0008877
416 Ga0373933_0008229
417 Ga0373937_0036079
418 Ga0373937_0040449
419 Ga0373925_0011729
420 Ga0439433_0008881
421 Ga0439435_0001248
422 Ga0439435_0007487
423 Ga0439464_0001942
424 Ga0453684_0078592
425 Ga0451576_0135845
426 Ga0495586_0026167
427 Ga0495621_0007411
428 Ga0496104_0021139
429 Ga0496105_0022542
430 Ga0496106_0069629
431 Ga0496108_0008652
432 Ga0496109_0003803
433 Ga0496109_0031072
434 Ga0496110_0004326
435 Ga0496112_0006951
436 Ga0496113_0071454
437 Ga0501031_0083704
438 Ga0501032_0002067
439 Ga0501033_0033301
440 Ga0501033_0096579
441 Ga0501033_0109661
442 Ga0501034_0004512
443 Ga0501034_0018988
444 Ga0501034_0043864
445 Ga0501036_0001138
446 Ga0501037_0008493
447 Ga0501037_0068794
448 Ga0501038_0002121
449 Ga0501039_0043065
450 Ga0501040_0036471
451 Ga0501040_0059515
452 Ga0501042_0001141
453 Ga0501042_0041757
454 Ga0501042_0052509
455 Ga0501042_0070940
456 Ga0501043_0015344
457 Ga0501043_0023590
458 Ga0501043_0026223
459 Ga0501046_0004690
460 Ga0501046_0007714
461 Ga0501046_0019964
462 Ga0501047_0003758
463 Ga0501047_0072581
464 Ga0501048_0015223
465 Ga0501048_0028620
466 Ga0501048_0059373
467 Ga0501067_0003815
468 Ga0501068_0007955
469 Ga0501069_0026487
470 Ga0501070_0000530
471 Ga0501071_0010896
472 Ga0501071_0055184
473 Ga0501071_0082882
474 Ga0501072_0018138
475 Ga0501073_0003665
476 Ga0501073_0028712
477 Ga0501073_0033271
478 Ga0501073_0050012
479 Ga0501073_0053412
480 Ga0501074_0009500
481 Ga0501074_0079842
482 Ga0501075_0014634
483 Ga0501075_0016942
484 Ga0501075_0038592
485 Ga0501075_0050366
486 Ga0501075_0114025
487 Ga0501075_0136811
488 Ga0501076_0004338
489 Ga0501076_0033607
490 Ga0501076_0035606
491 Ga0501076_0087483
492 Ga0501076_0180626
493 Ga0501077_0016483
494 Ga0501077_0054282
495 Ga0501217_007456
496 Ga0501079_0016643
497 Ga0501079_0017823
498 Ga0501079_0019420
499 Ga0501080_0001466
500 Ga0501080_0062502
501 Ga0501080_0071466
502 Ga0501081_0017250
503 Ga0501081_0018290
504 Ga0501083_0018613
505 Ga0501083_0018750
506 Ga0501083_0077875
507 Ga0501044_0077679
508 Ga0501045_0008262
509 Ga0501045_0013745
510 nmdc:mga03683_4160_c1
511 nmdc:mga00v17_11086_c2
512 nmdc:mga00v17_8848_c1
513 nmdc:mga0k408_43223_c1
514 nmdc:mga06z11_24291_c1
515 nmdc:mga05p37_108318_c1
516 nmdc:mga05p37_18646_c1
517 nmdc:mga05p37_24952_c1
518 nmdc:mga05p37_26309_c1
519 nmdc:mga05p37_48466_c1
520 nmdc:mga05p37_89294_c1
521 nmdc:mga09592_30508_c1
522 nmdc:mga09592_5942_c1
523 nmdc:mga0qj67_107670_c1
524 nmdc:mga0qj67_14690_c1
525 nmdc:mga0qj67_32847_c1
526 nmdc:mga06r32_13279_c1
527 nmdc:mga06r32_22825_c1
528 nmdc:mga06r32_24138_c1
529 nmdc:mga06r32_30316_c1
530 nmdc:mga06r32_40565_c1
531 nmdc:mga06r32_72991_c1
532 nmdc:mga06r32_7323_c1
533 nmdc:mga08y16_11768_c1
534 nmdc:mga08y16_18916_c1
535 nmdc:mga08y16_1935_c1
536 nmdc:mga08y16_235_c1
537 nmdc:mga08y16_27789_c1
538 nmdc:mga08y16_48499_c1
539 nmdc:mga0n895_16772_c1
540 nmdc:mga0n895_195073_c1
541 nmdc:mga0a205_24513_c1
542 Ga0500641_0004947
543 Ga0501084_0007080
544 Ga0501084_0008017
545 Ga0501084_0025066
546 Ga0501084_0042787
547 Ga0501084_0048445
548 Ga0590074_001798
549 Ga0590075_000377
550 Ga0590075_000467
551 Ga0590075_002935
552 Ga0590077_000574
553 Ga0590077_002703
554 Ga0501082_0029300
555 Ga0501082_0073671
556 Ga0501082_0103082

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00570

HRDC

HRDC domain

564

631

0.97

PF00271

Helicase_C

Helicase conserved C-terminal domain

247

356

0.94

PF09382

RQC

RQC domain

438

546

0.94

PF16124

RecQ_Zn_bind

RecQ zinc-binding

367

428

0.89

PF00270

DEAD

DEAD/DEAH box helicase

51

217

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wud-assembly1.cif.gz_A e. coli recq hrdc domain 0.9857 539 608
2rhf-assembly1.cif.gz_A d. radiodurans recq hrdc domain 3 0.9643 542 609
1wud-assembly1.cif.gz_A e. coli recq hrdc domain 0.886 539 608
2rhf-assembly1.cif.gz_A d. radiodurans recq hrdc domain 3 0.8553 542 609
2hjv-assembly2.cif.gz_B structure of the second domain (residues 207-368) of the bacillus subtilis yxin protein 0.8267 214 359
ID Description Score Start End Superfamily
af_Q9FT69_484_600_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9578 238 339 3.40.50.300
1oywA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9568 8 209 3.40.50.300
af_A0A1D6HM55_7_223_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9488 9 210 3.40.50.300
af_P46063_48_282_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9482 9 210 3.40.50.300
af_Q8I2W7_281_511_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.944 210 395 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3C1SN43-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.9729 9 127 GO:0003676
GO:0005524
GO:0005694
GO:0005737
GO:0006281
GO:0006310
GO:0009378
GO:0043138
AF-A0A520WKM4-F1-model_v4 deleted 0.9675 11 163
AF-A0A0P7Z107-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.9621 11 187 GO:0003676
GO:0005524
GO:0005737
GO:0006281
GO:0006310
GO:0009378
GO:0030894
GO:0043138
GO:0043590
AF-A0A7W5QDV2-F1-model_v4 deleted 0.9589 11 151
AF-A0A3C1SN43-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.9494 9 127 GO:0003676
GO:0005524
GO:0005694
GO:0005737
GO:0006281
GO:0006310
GO:0009378
GO:0043138

Map