F381446

General Info

Members Datasets Scaffolds Average Seq Length
276 160 275 148

Family's Representative Sequence

Representative Sequence 3300053156|Ga0500622_0000003|Ga0500622_0000003_150790_151314
Length 174
Sequence MAAGSGPTLKWEKEQHFISHYIDRFRKNLSNMTDSVAEILLVEDNEDDARLAIRALKNQNFANKLLHLNDGVEALDFLFATGTFEGRNVLHTPKVVLLDLKMPRINGLEVLERIKSDARTKIIPVVILTSSSEDPDIRRAYELGANSYIVKPVEFDNFVKAISELGLYWMLLNK

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
64 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
97 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
98 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
99 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
102 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
103 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
104 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
105 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
106 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
107 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
108 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
109 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
112 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
113 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
114 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
115 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
116 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
117 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
118 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
121 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
126 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
127 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
128 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
129 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
130 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
131 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
134 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
135 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
136 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
148 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
149 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
150 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
151 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
152 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
156 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
157 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
158 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
159 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
160 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.28
Metatranscriptomes 0.72
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.26
Nodule 0
Rhizoplane 1.09
Rhizosphere 91.3
Stem 0
Stem Tuber 0
Unclassified 4.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10000168 3300003320 Bacteria 68699
2 rootH2_10018098 3300003320 Bacteria 4188
3 rootL2_10007360 3300003322 Bacteria 33980
4 rootH1_10008775 3300003323 Bacteria 36529
5 Ga0070676_10233130 3300005328 Bacteria 1221
6 Ga0070676_10539220 3300005328 Unclassified 834
7 Ga0070670_100025702 3300005331 Bacteria 5066
8 Ga0068869_100058505 3300005334 Bacteria 2818
9 Ga0068869_100093256 3300005334 Bacteria 2268
10 Ga0070666_10000199 3300005335 Bacteria 40923
11 Ga0070682_100000363 3300005337 Bacteria 30576
12 Ga0070682_100092787 3300005337 Bacteria 1978
13 Ga0070682_100683198 3300005337 Bacteria 821
14 Ga0068868_100225769 3300005338 Bacteria 1569
15 Ga0068868_100644500 3300005338 Unclassified 943
16 Ga0068868_100779563 3300005338 Bacteria 861
17 Ga0070668_100016367 3300005347 Bacteria 5544
18 Ga0070668_100943310 3300005347 Bacteria 773
19 Ga0070669_100019177 3300005353 Bacteria 4887
20 Ga0070671_100057448 3300005355 Bacteria 3238
21 Ga0070671_100356979 3300005355 Bacteria 1248
22 Ga0070674_100714406 3300005356 Bacteria 858
23 Ga0070688_100089558 3300005365 Bacteria 2008
24 Ga0070667_100017442 3300005367 Bacteria 5951
25 Ga0070667_100057307 3300005367 Bacteria 3293
26 Ga0070667_100073922 3300005367 Bacteria 2907
27 Ga0070667_100172369 3300005367 Bacteria 1911
28 Ga0070667_100280936 3300005367 Bacteria 1495
29 Ga0070667_100298573 3300005367 Bacteria 1450
30 Ga0070714_100167606 3300005435 Bacteria 1991
31 Ga0070708_100904696 3300005445 Unclassified 828
32 Ga0068867_100527113 3300005459 Bacteria 1019
33 Ga0070672_100207286 3300005543 Bacteria 1641
34 Ga0070672_101844789 3300005543 Unclassified 544
35 Ga0070693_100253134 3300005547 Bacteria 1168
36 Ga0070693_100633883 3300005547 Bacteria 775
37 Ga0070665_100248359 3300005548 Bacteria 1780
38 Ga0068855_100318411 3300005563 Unclassified 1720
39 Ga0068855_100458477 3300005563 Bacteria 1390
40 Ga0068855_101026290 3300005563 Bacteria 865
41 Ga0068854_100968028 3300005578 Bacteria 752
42 Ga0068856_100221179 3300005614 Bacteria 1909
43 Ga0068856_101359234 3300005614 Unclassified 725
44 Ga0068852_101742785 3300005616 Bacteria 645
45 Ga0068859_100000227 3300005617 Bacteria 55148
46 Ga0068859_100000413 3300005617 Bacteria 42543
47 Ga0068859_101823822 3300005617 Unclassified 672
48 Ga0068864_100049077 3300005618 Bacteria 3630
49 Ga0068864_100176519 3300005618 Unclassified 1951
50 Ga0068864_100945251 3300005618 Bacteria 853
51 Ga0068851_10024738 3300005834 Bacteria 2941
52 Ga0068870_10096016 3300005840 Bacteria 1666
53 Ga0068863_100002758 3300005841 Bacteria 17398
54 Ga0068863_100286652 3300005841 Unclassified 1596
55 Ga0068863_100312179 3300005841 Bacteria 1526
56 Ga0068863_100678067 3300005841 Bacteria 1023
57 Ga0068858_100040572 3300005842 Bacteria 4317
58 Ga0068860_100002301 3300005843 Bacteria 20084
59 Ga0068860_100004515 3300005843 Bacteria 14202
60 Ga0068860_100297305 3300005843 Bacteria 1581
61 Ga0068862_100026286 3300005844 Bacteria 4893
62 Ga0081540_1010529 3300005983 Bacteria 6250
63 Ga0081539_10007765 3300005985 Bacteria 9609
64 Ga0097621_100040504 3300006237 Bacteria 3746
65 Ga0097621_100108072 3300006237 Bacteria 2348
66 Ga0097621_100141019 3300006237 Bacteria 2059
67 Ga0097621_100212912 3300006237 Bacteria 1681
68 Ga0097621_100263444 3300006237 Bacteria 1513
69 Ga0097621_100704128 3300006237 Bacteria 930
70 Ga0068871_100008711 3300006358 Bacteria 7297
71 Ga0068871_100121935 3300006358 Bacteria 2203
72 Ga0068871_100215032 3300006358 Bacteria 1664
73 Ga0068871_100395443 3300006358 Unclassified 1230
74 Ga0075436_100404734 3300006914 Bacteria 989
75 Ga0097620_100000227 3300006931 Bacteria 55148
76 Ga0097620_100000413 3300006931 Bacteria 42543
77 Ga0097620_100000461 3300006931 Bacteria 40272
78 Ga0097620_101823272 3300006931 Unclassified 672
79 Ga0097620_103058730 3300006931 Bacteria 510
80 Ga0105251_10218983 3300009011 Bacteria 857
81 Ga0105240_10001605 3300009093 Bacteria 38368
82 Ga0105240_10015746 3300009093 Bacteria 10262
83 Ga0111539_10438045 3300009094 Bacteria 1522
84 Ga0111539_11141680 3300009094 Bacteria 905
85 Ga0105245_10092198 3300009098 Bacteria 2789
86 Ga0105245_10451812 3300009098 Bacteria 1294
87 Ga0114129_10196556 3300009147 Unclassified 2734
88 Ga0105241_10018575 3300009174 Bacteria 5116
89 Ga0105241_11257744 3300009174 Bacteria 703
90 Ga0105242_10139671 3300009176 Bacteria 2101
91 Ga0105242_10408833 3300009176 Bacteria 1269
92 Ga0105248_10821523 3300009177 Bacteria 1049
93 Ga0105237_10018828 3300009545 Bacteria 7141
94 Ga0105237_10121959 3300009545 Bacteria 2601
95 Ga0105237_10167130 3300009545 Bacteria 2199
96 Ga0105238_10017979 3300009551 Bacteria 7186
97 Ga0105249_10208021 3300009553 Unclassified 1918
98 Ga0105239_10000093 3300010375 Bacteria 125821
99 Ga0105239_10040524 3300010375 Bacteria 5103
100 Ga0105239_10059019 3300010375 Bacteria 4211
101 Ga0105246_10016764 3300011119 Bacteria 4645
102 Ga0105246_10035388 3300011119 Bacteria 3337
103 Ga0105246_10140949 3300011119 Unclassified 1813
104 Ga0157373_10273868 3300013100 Bacteria 1195
105 Ga0157374_10090240 3300013296 Bacteria 2921
106 Ga0157374_10354457 3300013296 Unclassified 1458
107 Ga0157378_10057318 3300013297 Bacteria 3472
108 Ga0157378_10122899 3300013297 Bacteria 2395
109 Ga0157378_10317857 3300013297 Bacteria 1512
110 Ga0157378_10479753 3300013297 Bacteria 1239
111 Ga0157378_11095987 3300013297 Bacteria 833
112 Ga0163162_10014170 3300013306 Bacteria 7790
113 Ga0163162_10223663 3300013306 Bacteria 2012
114 Ga0163162_11544542 3300013306 Unclassified 757
115 Ga0157372_10094898 3300013307 Bacteria 3398
116 Ga0157372_10973368 3300013307 Bacteria 983
117 Ga0157372_11250951 3300013307 Bacteria 857
118 Ga0157375_10075587 3300013308 Bacteria 3393
119 Ga0157375_10096562 3300013308 Bacteria 3028
120 Ga0157375_10212745 3300013308 Bacteria 2091
121 Ga0157375_10573385 3300013308 Bacteria 1289
122 Ga0163163_10345499 3300014325 Bacteria 1544
123 Ga0163163_10896515 3300014325 Bacteria 950
124 Ga0157377_10452399 3300014745 Bacteria 887
125 Ga0157379_10182219 3300014968 Bacteria 1897
126 Ga0206356_10644857 3300020070 Bacteria 3208
127 Ga0213876_10005290 3300021384 Bacteria 7102
128 Ga0224712_10017558 3300022467 Bacteria 2375
129 Ga0209050_1050103 3300025298 Bacteria 1064
130 Ga0207680_10000438 3300025903 Bacteria 19706
131 Ga0207647_10073651 3300025904 Bacteria 2058
132 Ga0207645_10398825 3300025907 Bacteria 925
133 Ga0207643_10141887 3300025908 Bacteria 1435
134 Ga0207654_10000276 3300025911 Bacteria 31276
135 Ga0207654_10803151 3300025911 Bacteria 679
136 Ga0207695_10006035 3300025913 Bacteria 15824
137 Ga0207671_10000502 3300025914 Bacteria 53150
138 Ga0207671_10108735 3300025914 Bacteria 2107
139 Ga0207671_10731243 3300025914 Bacteria 786
140 Ga0207681_10205295 3300025923 Bacteria 1515
141 Ga0207650_10459080 3300025925 Bacteria 1061
142 Ga0207687_11119582 3300025927 Unclassified 676
143 Ga0207664_10245184 3300025929 Bacteria 1561
144 Ga0207644_10013413 3300025931 Bacteria 5462
145 Ga0207644_10043992 3300025931 Bacteria 3171
146 Ga0207686_10203602 3300025934 Bacteria 1419
147 Ga0207669_10532750 3300025937 Bacteria 945
148 Ga0207704_11057838 3300025938 Bacteria 688
149 Ga0207665_10238901 3300025939 Bacteria 1338
150 Ga0207691_10067932 3300025940 Bacteria 3221
151 Ga0207689_10001524 3300025942 Bacteria 22055
152 Ga0207689_10004213 3300025942 Bacteria 13077
153 Ga0207689_10188358 3300025942 Bacteria 1702
154 Ga0207667_10037597 3300025949 Bacteria 5174
155 Ga0207667_10250907 3300025949 Unclassified 1810
156 Ga0207667_10323115 3300025949 Bacteria 1576
157 Ga0207667_10524897 3300025949 Bacteria 1199
158 Ga0207667_11918630 3300025949 Bacteria 554
159 Ga0207712_10011972 3300025961 Bacteria 5534
160 Ga0207712_10092039 3300025961 Bacteria 2234
161 Ga0207668_10240528 3300025972 Bacteria 1464
162 Ga0207668_10941306 3300025972 Unclassified 770
163 Ga0207668_11259406 3300025972 Bacteria 665
164 Ga0207658_10211433 3300025986 Bacteria 1626
165 Ga0207658_10282935 3300025986 Bacteria 1422
166 Ga0207658_10420136 3300025986 Bacteria 1179
167 Ga0207677_10100688 3300026023 Bacteria 2125
168 Ga0207677_10273162 3300026023 Unclassified 1384
169 Ga0207677_10303875 3300026023 Unclassified 1319
170 Ga0207677_12278060 3300026023 Unclassified 504
171 Ga0207703_10569726 3300026035 Bacteria 1069
172 Ga0207639_10413600 3300026041 Bacteria 1218
173 Ga0207641_10175208 3300026088 Bacteria 1961
174 Ga0207641_10286628 3300026088 Bacteria 1551
175 Ga0207641_10460654 3300026088 Unclassified 1230
176 Ga0207676_10031341 3300026095 Bacteria 3998
177 Ga0207676_10682871 3300026095 Bacteria 993
178 Ga0207698_10263773 3300026142 Bacteria 1584
179 Ga0268265_10168434 3300028380 Unclassified 1869
180 Ga0268264_10001304 3300028381 Bacteria 23516
181 Ga0268264_10071394 3300028381 Unclassified 2942
182 Ga0265337_1002766 3300028556 Bacteria 7864
183 Ga0265337_1009109 3300028556 Bacteria 3564
184 Ga0265334_10085638 3300028573 Viruses 1156
185 Ga0265318_10018848 3300028577 Bacteria 2808
186 Ga0265336_10000743 3300028666 Bacteria 17306
187 Ga0307515_10000007 3300028794 Bacteria 719669
188 Ga0307515_10000203 3300028794 Bacteria 145242
189 Ga0265338_10003432 3300028800 Bacteria 22331
190 Ga0265338_10021810 3300028800 Bacteria 6658
191 Ga0265338_10182489 3300028800 Bacteria 1598
192 Ga0265324_10000669 3300029957 Bacteria 23139
193 Ga0265324_10000841 3300029957 Bacteria 19761
194 Ga0316181_1272543 3300030744 Bacteria 935
195 Ga0316182_1014266 3300030745 Bacteria 2684
196 Ga0265320_10009074 3300031240 Bacteria 6031
197 Ga0265325_10074686 3300031241 Bacteria 1695
198 Ga0265340_10416859 3300031247 Unclassified 592
199 Ga0265331_10001683 3300031250 Bacteria 15987
200 Ga0265331_10007985 3300031250 Bacteria 6057
201 Ga0265331_10014106 3300031250 Bacteria 4269
202 Ga0265327_10000237 3300031251 Bacteria 110403
203 Ga0265327_10006756 3300031251 Bacteria 9063
204 Ga0265327_10240640 3300031251 Unclassified 809
205 Ga0265327_10283956 3300031251 Bacteria 731
206 Ga0265316_10016747 3300031344 Bacteria 6349
207 Ga0265316_10020255 3300031344 Bacteria 5667
208 Ga0265316_10137500 3300031344 Bacteria 1838
209 Ga0307513_10404513 3300031456 Bacteria 1099
210 Ga0307408_100003340 3300031548 Bacteria 11015
211 Ga0265314_10001850 3300031711 Bacteria 22707
212 Ga0265314_10006515 3300031711 Bacteria 10311
213 Ga0265342_10076857 3300031712 Bacteria 1935
214 Ga0265342_10105858 3300031712 Viruses 1597
215 Ga0307516_10000322 3300031730 Bacteria 62349
216 Ga0307409_100654164 3300031995 Bacteria 1045
217 Ga0307414_10334645 3300032004 Bacteria 1294
218 Ga0373933_1134179 3300035724 Bacteria 515
219 Ga0373937_0303899 3300036401 Bacteria 1508
220 Ga0373937_1174865 3300036401 Bacteria 716
221 Ga0316582_0704040 3300036647 Unclassified 694
222 Ga0316584_0766755 3300036712 Unclassified 657
223 Ga0395901_0001212 3300038443 Bacteria 27433
224 Ga0400489_91291 3300039093 Bacteria 10727
225 Ga0436365_1648656 3300039437 Bacteria 629
226 Ga0436365_1684945 3300039437 Bacteria 47686
227 Ga0451797_0674136 3300041453 Bacteria 912
228 Ga0451798_0944965 3300041458 Bacteria 2511
229 Ga0451804_0495733 3300041463 Bacteria 1238
230 Ga0439451_081201 3300042009 Unclassified 651
231 Ga0439457_032444 3300042014 Bacteria 1159
232 Ga0451577_0015446 3300042876 Bacteria 7105
233 Ga0453684_0000586 3300044712 Bacteria 135374
234 Ga0453684_0049777 3300044712 Bacteria 5520
235 Ga0453684_0366808 3300044712 Unclassified 1620
236 Ga0453684_0368043 3300044712 Bacteria 1617
237 Ga0453684_0441129 3300044712 Bacteria 1451
238 Ga0453684_0695929 3300044712 Unclassified 1105
239 Ga0451576_0000167 3300045051 Bacteria 166164
240 Ga0451576_0041687 3300045051 Bacteria 4852
241 Ga0451576_0095819 3300045051 Bacteria 3086
242 Ga0451576_0998838 3300045051 Unclassified 877
243 Ga0466958_0394552 3300045836 Bacteria 893
244 Ga0495672_0008183 3300047320 Bacteria 7757
245 Ga0495687_001960 3300047443 Bacteria 17576
246 Ga0501031_0005427 3300049568 Bacteria 8302
247 Ga0501034_0803468 3300049571 Unclassified 833
248 Ga0501036_0028073 3300049572 Bacteria 4757
249 Ga0501037_0010892 3300049573 Bacteria 6681
250 Ga0501039_0008742 3300049575 Bacteria 7713
251 Ga0501040_0117749 3300049576 Unclassified 1862
252 Ga0501041_0003573 3300049577 Bacteria 8952
253 Ga0501042_0009242 3300049578 Bacteria 6559
254 Ga0501046_0006601 3300049580 Bacteria 10250
255 Ga0501072_0617379 3300049588 Unclassified 854
256 Ga0501073_0502673 3300049589 Bacteria 838
257 Ga0501076_0553744 3300049592 Unclassified 948
258 Ga0501242_003251 3300049674 Bacteria 1750
259 Ga0501257_000226 3300049686 Bacteria 11071
260 Ga0501259_004506 3300049688 Unclassified 2218
261 Ga0501261_016475 3300049690 Bacteria 1026
262 Ga0501225_0002685 3300049705 Bacteria 5461
263 Ga0501035_0020973 3300049822 Bacteria 6005
264 Ga0501044_0650680 3300049823 Bacteria 943
265 Ga0501044_0651462 3300049823 Unclassified 942
266 nmdc:mga08x19_333557_c1 3300050514 Bacteria 1057
267 nmdc:mga08x19_828775_c1 3300050514 Bacteria 657
268 Ga0500650_0000087 3300053098 Bacteria 26467
269 Ga0500650_0001171 3300053098 Bacteria 7657
270 Ga0500562_067973 3300053108 Bacteria 960
271 Ga0500604_0001826 3300053151 Bacteria 5927
272 Ga0500604_0009765 3300053151 Bacteria 2558
273 Ga0500622_0000003 3300053156 Bacteria 613483
274 Ga0500622_0000103 3300053156 Bacteria 86203
275 Ga0500627_0159140 3300053158 Unclassified 1019

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005543 Ga0070672_100207286 Ga0070672_1002072862 142
2 3300009147 Ga0114129_10196556 Ga0114129_101965562 142
3 3300013306 Ga0163162_10014170 Ga0163162_100141707 142
4 3300025940 Ga0207691_10067932 Ga0207691_100679322 142
5 3300025961 Ga0207712_10011972 Ga0207712_100119724 142
6 3300026023 Ga0207677_12278060 Ga0207677_122780601 142
7 3300026041 Ga0207639_10413600 Ga0207639_104136002 142
8 3300005335 Ga0070666_10000199 Ga0070666_1000019924 143
9 3300005338 Ga0068868_100644500 Ga0068868_1006445002 143
10 3300005355 Ga0070671_100356979 Ga0070671_1003569791 143
11 3300005367 Ga0070667_100057307 Ga0070667_1000573072 143
12 3300005435 Ga0070714_100167606 Ga0070714_1001676062 143
13 3300005617 Ga0068859_100000227 Ga0068859_10000022729 143
14 3300005618 Ga0068864_100049077 Ga0068864_1000490772 143
15 3300005834 Ga0068851_10024738 Ga0068851_100247382 143
16 3300005841 Ga0068863_100002758 Ga0068863_1000027587 143
17 3300005842 Ga0068858_100040572 Ga0068858_1000405726 143
18 3300005843 Ga0068860_100004515 Ga0068860_10000451512 143
19 3300006237 Ga0097621_100141019 Ga0097621_1001410192 143
20 3300006237 Ga0097621_100263444 Ga0097621_1002634442 143
21 3300006358 Ga0068871_100008711 Ga0068871_1000087114 143
22 3300006358 Ga0068871_100215032 Ga0068871_1002150322 143
23 3300006931 Ga0097620_100000227 Ga0097620_10000022729 143
24 3300009098 Ga0105245_10092198 Ga0105245_100921982 143
25 3300009174 Ga0105241_10018575 Ga0105241_100185755 143
26 3300009176 Ga0105242_10408833 Ga0105242_104088332 143
27 3300009545 Ga0105237_10018828 Ga0105237_100188288 143
28 3300010375 Ga0105239_10059019 Ga0105239_100590193 143
29 3300011119 Ga0105246_10035388 Ga0105246_100353882 143
30 3300011119 Ga0105246_10140949 Ga0105246_101409492 143
31 3300013297 Ga0157378_10317857 Ga0157378_103178572 143
32 3300013308 Ga0157375_10212745 Ga0157375_102127452 143
33 3300014325 Ga0163163_10345499 Ga0163163_103454992 143
34 3300014968 Ga0157379_10182219 Ga0157379_101822192 143
35 3300022467 Ga0224712_10017558 Ga0224712_100175582 143
36 3300025903 Ga0207680_10000438 Ga0207680_1000043810 143
37 3300025904 Ga0207647_10073651 Ga0207647_100736511 143
38 3300025911 Ga0207654_10000276 Ga0207654_1000027618 143
39 3300025914 Ga0207671_10000502 Ga0207671_1000050216 143
40 3300025929 Ga0207664_10245184 Ga0207664_102451842 143
41 3300025942 Ga0207689_10001524 Ga0207689_1000152411 143
42 3300026023 Ga0207677_10303875 Ga0207677_103038752 143
43 3300026035 Ga0207703_10569726 Ga0207703_105697262 143
44 3300026095 Ga0207676_10031341 Ga0207676_100313412 143
45 3300026142 Ga0207698_10263773 Ga0207698_102637732 143
46 3300028381 Ga0268264_10001304 Ga0268264_100013047 143
47 3300049589 Ga0501073_0502673 Ga0501073_0502673_138_572 143
48 3300053151 Ga0500604_0001826 Ga0500604_0001826_1215_1646 143
49 3300005618 Ga0068864_100945251 Ga0068864_1009452512 144
50 3300013296 Ga0157374_10090240 Ga0157374_100902402 144
51 3300013296 Ga0157374_10354457 Ga0157374_103544572 144
52 3300013297 Ga0157378_10057318 Ga0157378_100573182 144
53 3300053156 Ga0500622_0000003 Ga0500622_0000003_150790_151314 144
54 3300005328 Ga0070676_10539220 Ga0070676_105392202 145
55 3300005338 Ga0068868_100779563 Ga0068868_1007795632 145
56 3300005347 Ga0070668_100943310 Ga0070668_1009433102 145
57 3300005614 Ga0068856_101359234 Ga0068856_1013592342 145
58 3300005617 Ga0068859_100000413 Ga0068859_10000041333 145
59 3300006237 Ga0097621_100040504 Ga0097621_1000405044 145
60 3300006358 Ga0068871_100008711 Ga0068871_1000087118 145
61 3300006931 Ga0097620_100000413 Ga0097620_10000041333 145
62 3300013297 Ga0157378_10479753 Ga0157378_104797532 145
63 3300013307 Ga0157372_10973368 Ga0157372_109733682 145
64 3300013308 Ga0157375_10573385 Ga0157375_105733852 145
65 3300025972 Ga0207668_11259406 Ga0207668_112594062 145
66 3300026023 Ga0207677_10273162 Ga0207677_102731622 145
67 3300031548 Ga0307408_100003340 Ga0307408_1000033406 145
68 3300031995 Ga0307409_100654164 Ga0307409_1006541641 145
69 3300038443 Ga0395901_0001212 Ga0395901_0001212_7532_7969 145
70 3300044712 Ga0453684_0366808 Ga0453684_0366808_1126_1563 145
71 3300047320 Ga0495672_0008183 Ga0495672_0008183_2904_3341 145
72 3300049568 Ga0501031_0005427 Ga0501031_0005427_3568_4005 145
73 3300049571 Ga0501034_0803468 Ga0501034_0803468_86_523 145
74 3300049572 Ga0501036_0028073 Ga0501036_0028073_2083_2520 145
75 3300049573 Ga0501037_0010892 Ga0501037_0010892_4164_4601 145
76 3300049575 Ga0501039_0008742 Ga0501039_0008742_3837_4274 145
77 3300049576 Ga0501040_0117749 Ga0501040_0117749_1321_1758 145
78 3300049577 Ga0501041_0003573 Ga0501041_0003573_3567_4004 145
79 3300049578 Ga0501042_0009242 Ga0501042_0009242_2936_3373 145
80 3300049580 Ga0501046_0006601 Ga0501046_0006601_4403_4840 145
81 3300049588 Ga0501072_0617379 Ga0501072_0617379_62_499 145
82 3300049592 Ga0501076_0553744 Ga0501076_0553744_477_914 145
83 3300049822 Ga0501035_0020973 Ga0501035_0020973_1152_1589 145
84 3300049823 Ga0501044_0651462 Ga0501044_0651462_422_859 145
85 3300005331 Ga0070670_100025702 Ga0070670_1000257021 146
86 3300005334 Ga0068869_100093256 Ga0068869_1000932562 146
87 3300005338 Ga0068868_100225769 Ga0068868_1002257692 146
88 3300005353 Ga0070669_100019177 Ga0070669_1000191772 146
89 3300005367 Ga0070667_100280936 Ga0070667_1002809362 146
90 3300005367 Ga0070667_100298573 Ga0070667_1002985732 146
91 3300005547 Ga0070693_100253134 Ga0070693_1002531342 146
92 3300005548 Ga0070665_100248359 Ga0070665_1002483592 146
93 3300005563 Ga0068855_100458477 Ga0068855_1004584771 146
94 3300005563 Ga0068855_101026290 Ga0068855_1010262902 146
95 3300005578 Ga0068854_100968028 Ga0068854_1009680281 146
96 3300005616 Ga0068852_101742785 Ga0068852_1017427852 146
97 3300005618 Ga0068864_100176519 Ga0068864_1001765192 146
98 3300005841 Ga0068863_100678067 Ga0068863_1006780672 146
99 3300005843 Ga0068860_100002301 Ga0068860_1000023012 146
100 3300005844 Ga0068862_100026286 Ga0068862_1000262863 146
101 3300006237 Ga0097621_100212912 Ga0097621_1002129122 146
102 3300006931 Ga0097620_100000461 Ga0097620_10000046131 146
103 3300009011 Ga0105251_10218983 Ga0105251_102189832 146
104 3300009093 Ga0105240_10001605 Ga0105240_1000160515 146
105 3300009098 Ga0105245_10451812 Ga0105245_104518122 146
106 3300009174 Ga0105241_11257744 Ga0105241_112577442 146
107 3300009553 Ga0105249_10208021 Ga0105249_102080212 146
108 3300010375 Ga0105239_10040524 Ga0105239_100405243 146
109 3300013297 Ga0157378_10122899 Ga0157378_101228992 146
110 3300013297 Ga0157378_11095987 Ga0157378_110959872 146
111 3300013308 Ga0157375_10075587 Ga0157375_100755872 146
112 3300014325 Ga0163163_10896515 Ga0163163_108965152 146
113 3300014745 Ga0157377_10452399 Ga0157377_104523992 146
114 3300025907 Ga0207645_10398825 Ga0207645_103988252 146
115 3300025911 Ga0207654_10803151 Ga0207654_108031512 146
116 3300025913 Ga0207695_10006035 Ga0207695_100060352 146
117 3300025923 Ga0207681_10205295 Ga0207681_102052952 146
118 3300025925 Ga0207650_10459080 Ga0207650_104590802 146
119 3300025927 Ga0207687_11119582 Ga0207687_111195821 146
120 3300025931 Ga0207644_10013413 Ga0207644_100134133 146
121 3300025942 Ga0207689_10188358 Ga0207689_101883582 146
122 3300025949 Ga0207667_10037597 Ga0207667_100375973 146
123 3300025949 Ga0207667_10323115 Ga0207667_103231153 146
124 3300025949 Ga0207667_11918630 Ga0207667_119186301 146
125 3300025986 Ga0207658_10282935 Ga0207658_102829351 146
126 3300025986 Ga0207658_10420136 Ga0207658_104201362 146
127 3300026023 Ga0207677_10100688 Ga0207677_101006882 146
128 3300026088 Ga0207641_10460654 Ga0207641_104606542 146
129 3300026095 Ga0207676_10682871 Ga0207676_106828712 146
130 3300028380 Ga0268265_10168434 Ga0268265_101684342 146
131 3300028381 Ga0268264_10071394 Ga0268264_100713942 146
132 3300028794 Ga0307515_10000203 Ga0307515_10000203132 146
133 3300030745 Ga0316182_1014266 Ga0316182_10142662 146
134 3300031251 Ga0265327_10240640 Ga0265327_102406402 146
135 3300031344 Ga0265316_10016747 Ga0265316_100167475 146
136 3300031712 Ga0265342_10076857 Ga0265342_100768572 146
137 3300032004 Ga0307414_10334645 Ga0307414_103346452 146
138 3300042009 Ga0439451_081201 Ga0439451_081201_16_456 146
139 3300042014 Ga0439457_032444 Ga0439457_032444_110_550 146
140 3300047443 Ga0495687_001960 Ga0495687_001960_2395_2835 146
141 3300049690 Ga0501261_016475 Ga0501261_016475_550_993 146
142 3300053098 Ga0500650_0000087 Ga0500650_0000087_4150_4590 146
143 3300053098 Ga0500650_0001171 Ga0500650_0001171_6996_7436 146
144 3300005367 Ga0070667_100017442 Ga0070667_1000174425 147
145 3300005459 Ga0068867_100527113 Ga0068867_1005271132 147
146 3300005563 Ga0068855_100318411 Ga0068855_1003184112 147
147 3300005985 Ga0081539_10007765 Ga0081539_100077654 147
148 3300006931 Ga0097620_103058730 Ga0097620_1030587301 147
149 3300009094 Ga0111539_10438045 Ga0111539_104380452 147
150 3300009177 Ga0105248_10821523 Ga0105248_108215232 147
151 3300011119 Ga0105246_10016764 Ga0105246_100167643 147
152 3300013100 Ga0157373_10273868 Ga0157373_102738682 147
153 3300013306 Ga0163162_10223663 Ga0163162_102236632 147
154 3300013307 Ga0157372_11250951 Ga0157372_112509512 147
155 3300013308 Ga0157375_10096562 Ga0157375_100965622 147
156 3300025298 Ga0209050_1050103 Ga0209050_10501032 147
157 3300025949 Ga0207667_10250907 Ga0207667_102509072 147
158 3300028794 Ga0307515_10000007 Ga0307515_10000007412 147
159 3300030744 Ga0316181_1272543 Ga0316181_12725432 147
160 3300031456 Ga0307513_10404513 Ga0307513_104045132 147
161 3300035724 Ga0373933_1134179 Ga0373933_1134179_14_460 147
162 3300036712 Ga0316584_0766755 Ga0316584_0766755_131_574 147
163 3300041453 Ga0451797_0674136 Ga0451797_0674136_325_774 147
164 3300041458 Ga0451798_0944965 Ga0451798_0944965_482_928 147
165 3300041463 Ga0451804_0495733 Ga0451804_0495733_756_1202 147
166 3300042876 Ga0451577_0015446 Ga0451577_0015446_3188_3631 147
167 3300044712 Ga0453684_0000586 Ga0453684_0000586_69835_70278 147
168 3300044712 Ga0453684_0368043 Ga0453684_0368043_323_769 147
169 3300045051 Ga0451576_0095819 Ga0451576_0095819_453_899 147
170 3300053108 Ga0500562_067973 Ga0500562_067973_135_584 147
171 3300053151 Ga0500604_0009765 Ga0500604_0009765_1214_1663 147
172 3300053156 Ga0500622_0000103 Ga0500622_0000103_42429_42878 147
173 3300053158 Ga0500627_0159140 Ga0500627_0159140_45_494 147
174 3300005547 Ga0070693_100633883 Ga0070693_1006338831 148
175 3300005614 Ga0068856_100221179 Ga0068856_1002211792 148
176 3300005983 Ga0081540_1010529 Ga0081540_10105294 148
177 3300006237 Ga0097621_100108072 Ga0097621_1001080722 148
178 3300009093 Ga0105240_10015746 Ga0105240_100157469 148
179 3300009094 Ga0111539_11141680 Ga0111539_111416801 148
180 3300009545 Ga0105237_10167130 Ga0105237_101671302 148
181 3300009551 Ga0105238_10017979 Ga0105238_100179794 148
182 3300010375 Ga0105239_10000093 Ga0105239_1000009342 148
183 3300020070 Ga0206356_10644857 Ga0206356_106448573 148
184 3300021384 Ga0213876_10005290 Ga0213876_100052905 148
185 3300025914 Ga0207671_10108735 Ga0207671_101087352 148
186 3300025949 Ga0207667_10524897 Ga0207667_105248972 148
187 3300036401 Ga0373937_0303899 Ga0373937_0303899_161_610 148
188 3300039093 Ga0400489_91291 Ga0400489_91291_5046_5501 148
189 3300039437 Ga0436365_1648656 Ga0436365_1648656_46_495 148
190 3300039437 Ga0436365_1684945 Ga0436365_1684945_20300_20749 148
191 3300044712 Ga0453684_0695929 Ga0453684_0695929_467_919 148
192 3300045836 Ga0466958_0394552 Ga0466958_0394552_274_720 148
193 3300049674 Ga0501242_003251 Ga0501242_003251_887_1339 148
194 3300049686 Ga0501257_000226 Ga0501257_000226_6867_7319 148
195 3300049688 Ga0501259_004506 Ga0501259_004506_207_659 148
196 3300049705 Ga0501225_0002685 Ga0501225_0002685_2207_2659 148
197 3300005445 Ga0070708_100904696 Ga0070708_1009046962 149
198 3300005843 Ga0068860_100297305 Ga0068860_1002973052 149
199 3300006914 Ga0075436_100404734 Ga0075436_1004047342 149
200 3300025939 Ga0207665_10238901 Ga0207665_102389012 149
201 3300031250 Ga0265331_10001683 Ga0265331_100016839 149
202 3300031251 Ga0265327_10000237 Ga0265327_1000023764 149
203 3300031730 Ga0307516_10000322 Ga0307516_1000032238 149
204 3300036647 Ga0316582_0704040 Ga0316582_0704040_192_641 149
205 3300044712 Ga0453684_0441129 Ga0453684_0441129_952_1413 149
206 3300045051 Ga0451576_0000167 Ga0451576_0000167_72674_73126 149
207 3300049823 Ga0501044_0650680 Ga0501044_0650680_158_607 149
208 3300050514 nmdc:mga08x19_333557_c1 nmdc:mga08x19_333557_c1_14_493 149
209 3300050514 nmdc:mga08x19_828775_c1 nmdc:mga08x19_828775_c1_150_614 149
210 3300003320 rootH2_10000168 rootH2_1000016833 150
211 3300003320 rootH2_10018098 rootH2_100180982 150
212 3300003322 rootL2_10007360 rootL2_100073609 150
213 3300003323 rootH1_10008775 rootH1_1000877517 150
214 3300005328 Ga0070676_10233130 Ga0070676_102331302 150
215 3300005334 Ga0068869_100058505 Ga0068869_1000585052 150
216 3300005337 Ga0070682_100000363 Ga0070682_10000036319 150
217 3300005337 Ga0070682_100092787 Ga0070682_1000927872 150
218 3300005337 Ga0070682_100683198 Ga0070682_1006831981 150
219 3300005347 Ga0070668_100016367 Ga0070668_1000163672 150
220 3300005355 Ga0070671_100057448 Ga0070671_1000574482 150
221 3300005356 Ga0070674_100714406 Ga0070674_1007144062 150
222 3300005365 Ga0070688_100089558 Ga0070688_1000895582 150
223 3300005367 Ga0070667_100073922 Ga0070667_1000739222 150
224 3300005367 Ga0070667_100172369 Ga0070667_1001723692 150
225 3300005543 Ga0070672_101844789 Ga0070672_1018447891 150
226 3300005617 Ga0068859_101823822 Ga0068859_1018238222 150
227 3300005840 Ga0068870_10096016 Ga0068870_100960162 150
228 3300005841 Ga0068863_100286652 Ga0068863_1002866522 150
229 3300005841 Ga0068863_100312179 Ga0068863_1003121791 150
230 3300006237 Ga0097621_100704128 Ga0097621_1007041282 150
231 3300006358 Ga0068871_100121935 Ga0068871_1001219352 150
232 3300006358 Ga0068871_100395443 Ga0068871_1003954433 150
233 3300006931 Ga0097620_101823272 Ga0097620_1018232722 150
234 3300009176 Ga0105242_10139671 Ga0105242_101396711 150
235 3300009545 Ga0105237_10121959 Ga0105237_101219592 150
236 3300013306 Ga0163162_11544542 Ga0163162_115445422 150
237 3300013307 Ga0157372_10094898 Ga0157372_100948982 150
238 3300025908 Ga0207643_10141887 Ga0207643_101418872 150
239 3300025914 Ga0207671_10731243 Ga0207671_107312432 150
240 3300025931 Ga0207644_10043992 Ga0207644_100439922 150
241 3300025934 Ga0207686_10203602 Ga0207686_102036022 150
242 3300025937 Ga0207669_10532750 Ga0207669_105327502 150
243 3300025938 Ga0207704_11057838 Ga0207704_110578381 150
244 3300025942 Ga0207689_10004213 Ga0207689_100042137 150
245 3300025961 Ga0207712_10092039 Ga0207712_100920392 150
246 3300025972 Ga0207668_10240528 Ga0207668_102405282 150
247 3300025972 Ga0207668_10941306 Ga0207668_109413062 150
248 3300025986 Ga0207658_10211433 Ga0207658_102114332 150
249 3300026088 Ga0207641_10175208 Ga0207641_101752082 150
250 3300026088 Ga0207641_10286628 Ga0207641_102866281 150
251 3300028556 Ga0265337_1002766 Ga0265337_10027662 150
252 3300028556 Ga0265337_1009109 Ga0265337_10091092 150
253 3300028573 Ga0265334_10085638 Ga0265334_100856382 150
254 3300028577 Ga0265318_10018848 Ga0265318_100188482 150
255 3300028666 Ga0265336_10000743 Ga0265336_100007437 150
256 3300028800 Ga0265338_10003432 Ga0265338_100034327 150
257 3300028800 Ga0265338_10021810 Ga0265338_100218102 150
258 3300028800 Ga0265338_10182489 Ga0265338_101824892 150
259 3300029957 Ga0265324_10000669 Ga0265324_1000066918 150
260 3300029957 Ga0265324_10000841 Ga0265324_1000084119 150
261 3300031240 Ga0265320_10009074 Ga0265320_100090742 150
262 3300031241 Ga0265325_10074686 Ga0265325_100746862 150
263 3300031247 Ga0265340_10416859 Ga0265340_104168591 150
264 3300031250 Ga0265331_10007985 Ga0265331_100079854 150
265 3300031250 Ga0265331_10014106 Ga0265331_100141062 150
266 3300031251 Ga0265327_10006756 Ga0265327_100067562 150
267 3300031251 Ga0265327_10283956 Ga0265327_102839562 150
268 3300031344 Ga0265316_10020255 Ga0265316_100202553 150
269 3300031344 Ga0265316_10137500 Ga0265316_101375001 150
270 3300031711 Ga0265314_10001850 Ga0265314_1000185020 150
271 3300031711 Ga0265314_10006515 Ga0265314_100065154 150
272 3300031712 Ga0265342_10105858 Ga0265342_101058582 150
273 3300036401 Ga0373937_1174865 Ga0373937_1174865_112_603 150
274 3300044712 Ga0453684_0049777 Ga0453684_0049777_421_873 150
275 3300045051 Ga0451576_0041687 Ga0451576_0041687_1997_2452 150
276 3300045051 Ga0451576_0998838 Ga0451576_0998838_411_863 150

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

39

163

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1k68-assembly1.cif.gz_B crystal structure of the phosphorylated cyanobacterial phytochrome response regulator rcpa 0.9434 6 146
1jlk-assembly1.cif.gz_B crystal structure of the mn(2+)-bound form of response regulator rcp1 0.9303 7 147
1k66-assembly1.cif.gz_B crystal structure of the cyanobacterial phytochrome response regulator, rcpb 0.93 7 147
1k68-assembly1.cif.gz_B crystal structure of the phosphorylated cyanobacterial phytochrome response regulator rcpa 0.9239 6 146
1jlk-assembly1.cif.gz_B crystal structure of the mn(2+)-bound form of response regulator rcp1 0.9177 7 147
ID Description Score Start End Superfamily
1k66B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.93 7 147 3.40.50.2300
1jlkA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9281 6 147 3.40.50.2300
3h1eA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9135 7 135 3.40.50.2300
1jlkA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9093 6 147 3.40.50.2300
af_P08368_2_83_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8887 6 99 3.40.50.2300
ID Description Score Start End GO Terms
AF-I0IRS8-F1-model_v4 Putative response regulator receiver protein 0.9759 7 148 GO:0000160
AF-A0A4Y8NBX1-F1-model_v4 Response regulator 0.9683 7 146 GO:0000160
AF-A0A348P099-F1-model_v4 Two-component system response regulator 0.9633 7 146 GO:0000160
AF-A0A1U7IDY7-F1-model_v4 deleted 0.9602 7 148
AF-A0A536YMV0-F1-model_v4 Response regulator 0.9591 6 148 GO:0000160

Feature Viewer

pLDDT pTM Quality
90.37 0.87 High
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Predicted Structure (AlphaFold2)

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