F381347

General Info

Members Datasets Scaffolds Average Seq Length
276 175 552 709

Family's Representative Sequence

Representative Sequence 3300046683|Ga0495658_0025532|Ga0495658_0025532_333_2879
Length 848
Sequence MLVFALTIFTGAFLLFQVQPMIGKYILPWFGSGPGVWTTCMLFFQLLLLGGYAYAHFISRWFSSRTQVIVHLALLGAALLLLPITPSDSWKPRAAEDPKLQILLVLTVSVGLPYFALSATGPLLQQWCSRVKAGASPYRLYALSNAASLLALLSYPFYFENHLTRHAQTGLWAWGLLAFAICCGVCGVRVWKSAMPNRPSPKYPQSKVKGPGKLENTVPLSGSRPAILDRLLWLLLPACASVLLLATTNKLCQDVTVIPLLWVVPLAMYLLSFVICFDNPRWYRRLPLAVALAIALAGVYWALVSEIGVSVALQLGAYSTGLFVCCMVYHGELYRLRPAPSGLTGYYLIIAAGGALGGVFVTLVAPLIFTGYHELLWGLLLCPALFLVACLRDPEMGRGRFGKWRLRACACSLAAIAALGVTLWLQVHRSPNRGVARSRNFFGVLTVLKENPTSASLYSLKLQHGSTTHGLQLLDPALARLPTAYYGEKTGVGCVMRSLSAEHRRIGIVGLGVGTLAAYATSGDYLRFYEINPEVERLARLHFTYLANCAAQVEVALGDARLSLEKEPPQNFDLLVLDAFSSDAIPIHLLTREAFALYQQHLKPNGVIAVHISNNYLDLEPVIASVAEHFAYHVVLVETKVSPDEWWLLPTLWMLLSRDRQILRHPLIEAAARPVRTDPANVHLWTDDFASVYPILRFQSIPKMESTPAEAQAGIASYLGKKGDIAGAIAHLRRALQIDPGFPDVLNNLAWLLASGPDPSLRNGPEAVQLAERACQLTEYRRTIMLGTLAAAYAEAGRFPEAMATAERAIALASASGDQILAAKNHELLQLFRDGKPYHEPASPASSK

Samples

Sample ID Description Type Environment
1 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
94 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
95 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
96 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
97 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
98 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
99 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
100 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
101 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
102 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
108 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
109 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
110 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
113 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
114 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
115 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
116 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
117 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
121 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
122 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
125 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
126 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
127 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
128 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
129 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
130 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
131 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
132 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
133 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
134 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
137 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
138 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
139 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
140 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
141 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
142 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
143 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
144 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
145 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
146 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
147 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
148 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
149 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
150 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
151 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
152 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
153 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
154 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
155 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
169 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
170 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
171 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
172 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
173 2738541307 Variovorax sp. GV008 Isolate Unclassified
174 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
175 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.91
Metatranscriptomes 0
Isolates 1.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.45
Nodule 0
Rhizoplane 1.09
Rhizosphere 94.93
Stem 0
Stem Tuber 0
Unclassified 12.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495658_0025532 3300046683 Bacteria 3158
2 rootL2_10025564 3300003322 Bacteria 14942
3 Ga0065712_10074689 3300005290 Bacteria 4032
4 Ga0065707_10082738 3300005295 Bacteria 12390
5 Ga0070658_10006375 3300005327 Bacteria 9561
6 Ga0070690_100020639 3300005330 Bacteria 4015
7 Ga0070660_100002955 3300005339 Bacteria 11690
8 Ga0070687_100006828 3300005343 Unclassified 4707
9 Ga0070669_100001597 3300005353 Bacteria 16382
10 Ga0070675_100006049 3300005354 Bacteria 9271
11 Ga0070675_100041886 3300005354 Unclassified 3741
12 Ga0070673_100032297 3300005364 Unclassified 3940
13 Ga0070659_100099312 3300005366 Unclassified 2341
14 Ga0070714_100053490 3300005435 Bacteria 3447
15 Ga0070713_100003672 3300005436 Bacteria 10159
16 Ga0070711_100009520 3300005439 Bacteria 5991
17 Ga0070662_100003704 3300005457 Bacteria 9561
18 Ga0068867_100004716 3300005459 Bacteria 9592
19 Ga0068867_100012958 3300005459 Bacteria 5899
20 Ga0070698_100015850 3300005471 Bacteria 7961
21 Ga0070698_100023828 3300005471 Bacteria 6392
22 Ga0070699_100003083 3300005518 Bacteria 14773
23 Ga0070679_100090022 3300005530 Bacteria 3056
24 Ga0070672_100006430 3300005543 Bacteria 7900
25 Ga0070704_100001837 3300005549 Bacteria 11703
26 Ga0070704_100006571 3300005549 Bacteria 6858
27 Ga0068855_100008115 3300005563 Bacteria 12690
28 Ga0068855_100011311 3300005563 Bacteria 10776
29 Ga0068855_100014999 3300005563 Bacteria 9332
30 Ga0068855_100069337 3300005563 Bacteria 4103
31 Ga0068855_100072826 3300005563 Bacteria 3993
32 Ga0068857_100004775 3300005577 Bacteria 11478
33 Ga0068857_100032421 3300005577 Bacteria 4619
34 Ga0068856_100016922 3300005614 Bacteria 7066
35 Ga0068852_100025310 3300005616 Bacteria 4807
36 Ga0068852_100138037 3300005616 Bacteria 2253
37 Ga0068859_100007496 3300005617 Bacteria 11074
38 Ga0068859_100049479 3300005617 Bacteria 4221
39 Ga0068864_100009300 3300005618 Bacteria 8104
40 Ga0068861_100001602 3300005719 Bacteria 14407
41 Ga0068861_100007837 3300005719 Bacteria 7344
42 Ga0068863_100010380 3300005841 Bacteria 9048
43 Ga0068863_100012328 3300005841 Bacteria 8252
44 Ga0068863_100055937 3300005841 Bacteria 3736
45 Ga0068858_100009237 3300005842 Bacteria 9415
46 Ga0068858_100010315 3300005842 Bacteria 8854
47 Ga0068858_100016439 3300005842 Bacteria 6948
48 Ga0068860_100007903 3300005843 Bacteria 10618
49 Ga0068860_100071597 3300005843 Bacteria 3294
50 Ga0068862_100002713 3300005844 Bacteria 15541
51 Ga0081539_10001152 3300005985 Bacteria 47898
52 Ga0070717_10000029 3300006028 Bacteria 143008
53 Ga0070717_10086607 3300006028 Unclassified 2637
54 Ga0097621_100012021 3300006237 Bacteria 6405
55 Ga0097621_100049579 3300006237 Unclassified 3411
56 Ga0097621_100050986 3300006237 Unclassified 3367
57 Ga0068871_100049351 3300006358 Bacteria 3401
58 Ga0068871_100102496 3300006358 Bacteria 2399
59 Ga0075428_100024911 3300006844 Bacteria 6618
60 Ga0075434_100002778 3300006871 Bacteria 15486
61 Ga0075429_100005259 3300006880 Bacteria 11134
62 Ga0075429_100020144 3300006880 Bacteria 5784
63 Ga0068865_100004048 3300006881 Bacteria 8802
64 Ga0097620_100007496 3300006931 Bacteria 11074
65 Ga0097620_100049481 3300006931 Bacteria 4221
66 Ga0105240_10002698 3300009093 Bacteria 28220
67 Ga0105240_10004095 3300009093 Bacteria 22390
68 Ga0111539_10003752 3300009094 Bacteria 20000
69 Ga0111539_10035959 3300009094 Bacteria 5993
70 Ga0111539_10047324 3300009094 Bacteria 5140
71 Ga0105245_10002528 3300009098 Bacteria 16489
72 Ga0105245_10003909 3300009098 Bacteria 13245
73 Ga0105245_10018496 3300009098 Bacteria 6093
74 Ga0105245_10023527 3300009098 Bacteria 5408
75 Ga0114129_10002079 3300009147 Bacteria 27545
76 Ga0114129_10006286 3300009147 Bacteria 16842
77 Ga0114129_10060137 3300009147 Bacteria 5312
78 Ga0114129_10229277 3300009147 Unclassified 2502
79 Ga0105241_10006195 3300009174 Bacteria 8823
80 Ga0105248_10051452 3300009177 Bacteria 4622
81 Ga0105248_10061566 3300009177 Unclassified 4214
82 Ga0105248_10237270 3300009177 Bacteria 2053
83 Ga0105237_10035289 3300009545 Bacteria 5060
84 Ga0105238_10118173 3300009551 Unclassified 2632
85 Ga0105249_10031855 3300009553 Bacteria 4770
86 Ga0105239_10005444 3300010375 Bacteria 14937
87 Ga0105239_10013708 3300010375 Bacteria 9002
88 Ga0105239_10048480 3300010375 Bacteria 4658
89 Ga0157370_10005605 3300013104 Bacteria 14055
90 Ga0157370_10019194 3300013104 Bacteria 6871
91 Ga0157369_10069030 3300013105 Bacteria 3797
92 Ga0157374_10004993 3300013296 Bacteria 11131
93 Ga0157378_10010742 3300013297 Bacteria 8004
94 Ga0157378_10119835 3300013297 Bacteria 2424
95 Ga0157375_10053161 3300013308 Unclassified 3984
96 Ga0163163_10003045 3300014325 Bacteria 14186
97 Ga0163163_10012197 3300014325 Bacteria 7822
98 Ga0163163_10012688 3300014325 Bacteria 7686
99 Ga0163163_10027844 3300014325 Bacteria 5419
100 Ga0157377_10021511 3300014745 Bacteria 3393
101 Ga0157379_10036679 3300014968 Unclassified 4371
102 Ga0163161_10000076 3300017792 Bacteria 101523
103 Ga0213876_10000097 3300021384 Bacteria 99326
104 Ga0207680_10003979 3300025903 Bacteria 6978
105 Ga0207643_10006244 3300025908 Bacteria 6375
106 Ga0207707_10044731 3300025912 Bacteria 3858
107 Ga0207695_10005823 3300025913 Bacteria 16208
108 Ga0207695_10044099 3300025913 Bacteria 4747
109 Ga0207671_10042287 3300025914 Bacteria 3373
110 Ga0207662_10007870 3300025918 Bacteria 5807
111 Ga0207657_10005182 3300025919 Bacteria 13674
112 Ga0207652_10098807 3300025921 Bacteria 2575
113 Ga0207681_10000382 3300025923 Bacteria 31063
114 Ga0207694_10016289 3300025924 Bacteria 5610
115 Ga0207694_10074081 3300025924 Bacteria 2665
116 Ga0207659_10000105 3300025926 Bacteria 50176
117 Ga0207687_10007822 3300025927 Bacteria 7010
118 Ga0207687_10008886 3300025927 Bacteria 6568
119 Ga0207687_10037358 3300025927 Bacteria 3313
120 Ga0207700_10001274 3300025928 Bacteria 14377
121 Ga0207690_10046186 3300025932 Bacteria 2883
122 Ga0207706_10009837 3300025933 Bacteria 8770
123 Ga0207670_10004897 3300025936 Bacteria 7282
124 Ga0207691_10009800 3300025940 Bacteria 9197
125 Ga0207711_10027364 3300025941 Bacteria 4789
126 Ga0207711_10043356 3300025941 Unclassified 3837
127 Ga0207711_10089679 3300025941 Unclassified 2702
128 Ga0207667_10068146 3300025949 Unclassified 3706
129 Ga0207667_10135474 3300025949 Unclassified 2536
130 Ga0207651_10048846 3300025960 Bacteria 2863
131 Ga0207703_10011876 3300026035 Bacteria 6781
132 Ga0207703_10016116 3300026035 Bacteria 5827
133 Ga0207703_10057828 3300026035 Bacteria 3163
134 Ga0207703_10094941 3300026035 Bacteria 2515
135 Ga0207702_10152494 3300026078 Unclassified 2103
136 Ga0207641_10008933 3300026088 Bacteria 8281
137 Ga0207641_10013520 3300026088 Bacteria 6696
138 Ga0207648_10000246 3300026089 Bacteria 58501
139 Ga0207648_10022360 3300026089 Bacteria 5681
140 Ga0207676_10019111 3300026095 Unclassified 4992
141 Ga0207674_10000823 3300026116 Bacteria 40325
142 Ga0207674_10004496 3300026116 Bacteria 16757
143 Ga0207674_10028675 3300026116 Bacteria 5872
144 Ga0207674_10041187 3300026116 Bacteria 4779
145 Ga0207674_10043182 3300026116 Bacteria 4649
146 Ga0207674_10073819 3300026116 Bacteria 3424
147 Ga0207675_100019105 3300026118 Bacteria 6398
148 Ga0207675_100027315 3300026118 Bacteria 5316
149 Ga0207428_10009758 3300027907 Bacteria 8603
150 Ga0207428_10040228 3300027907 Unclassified 3794
151 Ga0268265_10002093 3300028380 Bacteria 15550
152 Ga0268264_10037914 3300028381 Bacteria 3975
153 Ga0265323_10001990 3300028653 Bacteria 9646
154 Ga0265323_10013302 3300028653 Unclassified 3285
155 Ga0265338_10057617 3300028800 Bacteria 3435
156 Ga0265320_10006329 3300031240 Bacteria 7474
157 Ga0265331_10024410 3300031250 Bacteria 3059
158 Ga0265327_10004710 3300031251 Bacteria 11916
159 Ga0265316_10006330 3300031344 Bacteria 11326
160 Ga0265316_10007531 3300031344 Bacteria 10245
161 Ga0307513_10102558 3300031456 Bacteria 2880
162 Ga0307408_100013645 3300031548 Bacteria 5395
163 Ga0265313_10001006 3300031595 Bacteria 27620
164 Ga0307508_10000209 3300031616 Bacteria 71055
165 Ga0265314_10000373 3300031711 Bacteria 61369
166 Ga0265314_10002241 3300031711 Bacteria 20053
167 Ga0265314_10011233 3300031711 Bacteria 7411
168 Ga0265314_10017219 3300031711 Bacteria 5677
169 Ga0265342_10025780 3300031712 Bacteria 3691
170 Ga0307405_10000380 3300031731 Bacteria 16649
171 Ga0307405_10011074 3300031731 Bacteria 4708
172 Ga0307413_10001385 3300031824 Bacteria 9119
173 Ga0307413_10003624 3300031824 Bacteria 6549
174 Ga0307410_10010556 3300031852 Bacteria 5239
175 Ga0307406_10032272 3300031901 Bacteria 3196
176 Ga0307412_10012332 3300031911 Bacteria 4979
177 Ga0307409_100009078 3300031995 Bacteria 6086
178 Ga0307416_100006489 3300032002 Bacteria 7330
179 Ga0307414_10044077 3300032004 Bacteria 3043
180 Ga0307411_10000053 3300032005 Bacteria 34373
181 Ga0307415_100000797 3300032126 Bacteria 14323
182 Ga0373935_0011622 3300035692 Bacteria 5288
183 Ga0373927_0008358 3300035695 Bacteria 6967
184 Ga0373927_0076056 3300035695 Unclassified 2174
185 Ga0373947_0009489 3300035725 Bacteria 5589
186 Ga0373947_0063471 3300035725 Unclassified 2250
187 Ga0395901_0083325 3300038443 Bacteria 3342
188 Ga0436365_1423688 3300039437 Bacteria 102720
189 Ga0436362_0596550 3300039453 Bacteria 5495
190 Ga0451577_0000176 3300042876 Bacteria 141176
191 Ga0451577_0000508 3300042876 Bacteria 65407
192 Ga0451577_0006081 3300042876 Bacteria 12134
193 Ga0451577_0076531 3300042876 Unclassified 2983
194 Ga0451577_0114032 3300042876 Archaea 2419
195 Ga0453683_0000987 3300044673 Bacteria 26828
196 Ga0453684_0000076 3300044712 Bacteria 437513
197 Ga0453684_0000417 3300044712 Bacteria 173793
198 Ga0453684_0009952 3300044712 Bacteria 16400
199 Ga0453684_0033524 3300044712 Bacteria 7156
200 Ga0453684_0072530 3300044712 Unclassified 4346
201 Ga0453684_0119339 3300044712 Bacteria 3188
202 Ga0453684_0127061 3300044712 Bacteria 3066
203 Ga0453684_0166729 3300044712 Unclassified 2599
204 Ga0453684_0184550 3300044712 Bacteria 2446
205 Ga0453684_0214210 3300044712 Bacteria 2236
206 Ga0451576_0002230 3300045051 Bacteria 29806
207 Ga0451576_0004316 3300045051 Bacteria 18569
208 Ga0451576_0006169 3300045051 Bacteria 14758
209 Ga0451576_0084737 3300045051 Bacteria 3297
210 Ga0451576_0232408 3300045051 Bacteria 1926
211 Ga0495641_0012736 3300046461 Unclassified 4679
212 Ga0495651_0003840 3300046462 Bacteria 11486
213 Ga0495651_0004838 3300046462 Bacteria 10304
214 Ga0495580_0000712 3300046472 Bacteria 28388
215 Ga0495580_0001028 3300046472 Bacteria 24494
216 Ga0495608_0016298 3300046511 Bacteria 5141
217 Ga0495628_0047160 3300046516 Bacteria 3420
218 Ga0495630_0001462 3300046517 Bacteria 16343
219 Ga0495630_0026927 3300046517 Unclassified 4261
220 Ga0495666_0033313 3300046526 Unclassified 2517
221 Ga0495665_0006775 3300046531 Bacteria 6179
222 Ga0495586_0000756 3300046535 Bacteria 18567
223 Ga0495586_0002363 3300046535 Bacteria 10239
224 Ga0495598_0006824 3300046537 Unclassified 2593
225 Ga0495645_0007341 3300046543 Bacteria 7668
226 Ga0495645_0062163 3300046543 Unclassified 2705
227 Ga0495635_0003966 3300046663 Bacteria 10293
228 Ga0495659_0004931 3300046664 Unclassified 4202
229 Ga0495588_0033958 3300046674 Bacteria 2580
230 Ga0495623_0005057 3300046679 Bacteria 8652
231 Ga0495646_0002597 3300046680 Bacteria 11132
232 Ga0495658_0002887 3300046683 Bacteria 8632
233 Ga0495613_0009534 3300046689 Bacteria 7208
234 Ga0495624_0015528 3300046690 Bacteria 5139
235 Ga0495624_0019968 3300046690 Bacteria 4464
236 Ga0495670_0040385 3300046691 Unclassified 2327
237 Ga0495671_0006462 3300046692 Bacteria 6772
238 Ga0495600_0045143 3300046809 Bacteria 2874
239 Ga0495674_0030324 3300047319 Bacteria 4918
240 Ga0495680_0000614 3300047322 Bacteria 40108
241 Ga0495675_0005008 3300047444 Bacteria 8060
242 Ga0495684_0018850 3300047471 Bacteria 5316
243 Ga0495593_0005140 3300047673 Bacteria 7735
244 Ga0495602_0022102 3300048088 Bacteria 6233
245 Ga0495614_0018840 3300048089 Bacteria 2989
246 Ga0496101_0006129 3300048904 Bacteria 7717
247 Ga0496112_0004842 3300048915 Bacteria 11495
248 Ga0496112_0090095 3300048915 Unclassified 3036
249 Ga0496123_0045657 3300048926 Bacteria 2982
250 Ga0501032_0000339 3300049569 Bacteria 39056
251 Ga0501033_0000750 3300049570 Bacteria 29867
252 Ga0501046_0000536 3300049580 Bacteria 37635
253 Ga0501046_0026959 3300049580 Bacteria 4692
254 Ga0501047_0005201 3300049581 Bacteria 12214
255 Ga0501047_0039313 3300049581 Bacteria 4576
256 Ga0501070_0002381 3300049586 Bacteria 16487
257 Ga0501080_0024446 3300049742 Bacteria 5599
258 Ga0501035_0000394 3300049822 Bacteria 49952
259 Ga0501035_0022524 3300049822 Bacteria 5786
260 Ga0501044_0000204 3300049823 Bacteria 75175
261 Ga0501044_0005167 3300049823 Bacteria 14538
262 nmdc:mga05p37_19131_c1 3300050507 Bacteria 8284
263 nmdc:mga05p37_3037_c1 3300050507 Bacteria 19486
264 nmdc:mga05p37_37787_c1 3300050507 Bacteria 5922
265 nmdc:mga09592_21231_c1 3300050508 Bacteria 5351
266 nmdc:mga08y16_48019_c1 3300050511 Unclassified 4468
267 nmdc:mga0n895_22548_c1 3300050512 Bacteria 5905
268 nmdc:mga0n895_38824_c1 3300050512 Bacteria 4615
269 Ga0495612_0004170 3300053078 Bacteria 5993
270 Ga0500555_000016 3300053103 Bacteria 203144
271 Ga0500593_000536 3300053117 Bacteria 14944
272 Ga0500607_008926 3300053121 Bacteria 6049
273 Ga0500634_0035330 3300053161 Bacteria 2723
274 2738884436 2738541307 Bacteria 8606193
275 2917554822 2917554339 Bacteria 4987857
276 2945915762 2945909444 Bacteria 7065066
277 Ga0495658_0025532
278 rootL2_10025564
279 Ga0065712_10074689
280 Ga0065707_10082738
281 Ga0070658_10006375
282 Ga0070690_100020639
283 Ga0070660_100002955
284 Ga0070687_100006828
285 Ga0070669_100001597
286 Ga0070675_100006049
287 Ga0070675_100041886
288 Ga0070673_100032297
289 Ga0070659_100099312
290 Ga0070714_100053490
291 Ga0070713_100003672
292 Ga0070711_100009520
293 Ga0070662_100003704
294 Ga0068867_100004716
295 Ga0068867_100012958
296 Ga0070698_100015850
297 Ga0070698_100023828
298 Ga0070699_100003083
299 Ga0070679_100090022
300 Ga0070672_100006430
301 Ga0070704_100001837
302 Ga0070704_100006571
303 Ga0068855_100008115
304 Ga0068855_100011311
305 Ga0068855_100014999
306 Ga0068855_100069337
307 Ga0068855_100072826
308 Ga0068857_100004775
309 Ga0068857_100032421
310 Ga0068856_100016922
311 Ga0068852_100025310
312 Ga0068852_100138037
313 Ga0068859_100007496
314 Ga0068859_100049479
315 Ga0068864_100009300
316 Ga0068861_100001602
317 Ga0068861_100007837
318 Ga0068863_100010380
319 Ga0068863_100012328
320 Ga0068863_100055937
321 Ga0068858_100009237
322 Ga0068858_100010315
323 Ga0068858_100016439
324 Ga0068860_100007903
325 Ga0068860_100071597
326 Ga0068862_100002713
327 Ga0081539_10001152
328 Ga0070717_10000029
329 Ga0070717_10086607
330 Ga0097621_100012021
331 Ga0097621_100049579
332 Ga0097621_100050986
333 Ga0068871_100049351
334 Ga0068871_100102496
335 Ga0075428_100024911
336 Ga0075434_100002778
337 Ga0075429_100005259
338 Ga0075429_100020144
339 Ga0068865_100004048
340 Ga0097620_100007496
341 Ga0097620_100049481
342 Ga0105240_10002698
343 Ga0105240_10004095
344 Ga0111539_10003752
345 Ga0111539_10035959
346 Ga0111539_10047324
347 Ga0105245_10002528
348 Ga0105245_10003909
349 Ga0105245_10018496
350 Ga0105245_10023527
351 Ga0114129_10002079
352 Ga0114129_10006286
353 Ga0114129_10060137
354 Ga0114129_10229277
355 Ga0105241_10006195
356 Ga0105248_10051452
357 Ga0105248_10061566
358 Ga0105248_10237270
359 Ga0105237_10035289
360 Ga0105238_10118173
361 Ga0105249_10031855
362 Ga0105239_10005444
363 Ga0105239_10013708
364 Ga0105239_10048480
365 Ga0157370_10005605
366 Ga0157370_10019194
367 Ga0157369_10069030
368 Ga0157374_10004993
369 Ga0157378_10010742
370 Ga0157378_10119835
371 Ga0157375_10053161
372 Ga0163163_10003045
373 Ga0163163_10012197
374 Ga0163163_10012688
375 Ga0163163_10027844
376 Ga0157377_10021511
377 Ga0157379_10036679
378 Ga0163161_10000076
379 Ga0213876_10000097
380 Ga0207680_10003979
381 Ga0207643_10006244
382 Ga0207707_10044731
383 Ga0207695_10005823
384 Ga0207695_10044099
385 Ga0207671_10042287
386 Ga0207662_10007870
387 Ga0207657_10005182
388 Ga0207652_10098807
389 Ga0207681_10000382
390 Ga0207694_10016289
391 Ga0207694_10074081
392 Ga0207659_10000105
393 Ga0207687_10007822
394 Ga0207687_10008886
395 Ga0207687_10037358
396 Ga0207700_10001274
397 Ga0207690_10046186
398 Ga0207706_10009837
399 Ga0207670_10004897
400 Ga0207691_10009800
401 Ga0207711_10027364
402 Ga0207711_10043356
403 Ga0207711_10089679
404 Ga0207667_10068146
405 Ga0207667_10135474
406 Ga0207651_10048846
407 Ga0207703_10011876
408 Ga0207703_10016116
409 Ga0207703_10057828
410 Ga0207703_10094941
411 Ga0207702_10152494
412 Ga0207641_10008933
413 Ga0207641_10013520
414 Ga0207648_10000246
415 Ga0207648_10022360
416 Ga0207676_10019111
417 Ga0207674_10000823
418 Ga0207674_10004496
419 Ga0207674_10028675
420 Ga0207674_10041187
421 Ga0207674_10043182
422 Ga0207674_10073819
423 Ga0207675_100019105
424 Ga0207675_100027315
425 Ga0207428_10009758
426 Ga0207428_10040228
427 Ga0268265_10002093
428 Ga0268264_10037914
429 Ga0265323_10001990
430 Ga0265323_10013302
431 Ga0265338_10057617
432 Ga0265320_10006329
433 Ga0265331_10024410
434 Ga0265327_10004710
435 Ga0265316_10006330
436 Ga0265316_10007531
437 Ga0307513_10102558
438 Ga0307408_100013645
439 Ga0265313_10001006
440 Ga0307508_10000209
441 Ga0265314_10000373
442 Ga0265314_10002241
443 Ga0265314_10011233
444 Ga0265314_10017219
445 Ga0265342_10025780
446 Ga0307405_10000380
447 Ga0307405_10011074
448 Ga0307413_10001385
449 Ga0307413_10003624
450 Ga0307410_10010556
451 Ga0307406_10032272
452 Ga0307412_10012332
453 Ga0307409_100009078
454 Ga0307416_100006489
455 Ga0307414_10044077
456 Ga0307411_10000053
457 Ga0307415_100000797
458 Ga0373935_0011622
459 Ga0373927_0008358
460 Ga0373927_0076056
461 Ga0373947_0009489
462 Ga0373947_0063471
463 Ga0395901_0083325
464 Ga0436365_1423688
465 Ga0436362_0596550
466 Ga0451577_0000176
467 Ga0451577_0000508
468 Ga0451577_0006081
469 Ga0451577_0076531
470 Ga0451577_0114032
471 Ga0453683_0000987
472 Ga0453684_0000076
473 Ga0453684_0000417
474 Ga0453684_0009952
475 Ga0453684_0033524
476 Ga0453684_0072530
477 Ga0453684_0119339
478 Ga0453684_0127061
479 Ga0453684_0166729
480 Ga0453684_0184550
481 Ga0453684_0214210
482 Ga0451576_0002230
483 Ga0451576_0004316
484 Ga0451576_0006169
485 Ga0451576_0084737
486 Ga0451576_0232408
487 Ga0495641_0012736
488 Ga0495651_0003840
489 Ga0495651_0004838
490 Ga0495580_0000712
491 Ga0495580_0001028
492 Ga0495608_0016298
493 Ga0495628_0047160
494 Ga0495630_0001462
495 Ga0495630_0026927
496 Ga0495666_0033313
497 Ga0495665_0006775
498 Ga0495586_0000756
499 Ga0495586_0002363
500 Ga0495598_0006824
501 Ga0495645_0007341
502 Ga0495645_0062163
503 Ga0495635_0003966
504 Ga0495659_0004931
505 Ga0495588_0033958
506 Ga0495623_0005057
507 Ga0495646_0002597
508 Ga0495658_0002887
509 Ga0495613_0009534
510 Ga0495624_0015528
511 Ga0495624_0019968
512 Ga0495670_0040385
513 Ga0495671_0006462
514 Ga0495600_0045143
515 Ga0495674_0030324
516 Ga0495680_0000614
517 Ga0495675_0005008
518 Ga0495684_0018850
519 Ga0495593_0005140
520 Ga0495602_0022102
521 Ga0495614_0018840
522 Ga0496101_0006129
523 Ga0496112_0004842
524 Ga0496112_0090095
525 Ga0496123_0045657
526 Ga0501032_0000339
527 Ga0501033_0000750
528 Ga0501046_0000536
529 Ga0501046_0026959
530 Ga0501047_0005201
531 Ga0501047_0039313
532 Ga0501070_0002381
533 Ga0501080_0024446
534 Ga0501035_0000394
535 Ga0501035_0022524
536 Ga0501044_0000204
537 Ga0501044_0005167
538 nmdc:mga05p37_19131_c1
539 nmdc:mga05p37_3037_c1
540 nmdc:mga05p37_37787_c1
541 nmdc:mga09592_21231_c1
542 nmdc:mga08y16_48019_c1
543 nmdc:mga0n895_22548_c1
544 nmdc:mga0n895_38824_c1
545 Ga0495612_0004170
546 Ga0500555_000016
547 Ga0500593_000536
548 Ga0500607_008926
549 Ga0500634_0035330
550 2738884436
551 2917554822
552 2945915762

MSA Aligner

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Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gjy-assembly1.cif.gz_A crystal structure of a probable spermidine synthase from corynebacterium glutamicum atcc 13032 0.7531 486 715
8gxo-assembly1.cif.gz_B the crystal structure of csfaomt1 in complex with sah 0.7475 557 717
4p58-assembly1.cif.gz_A crystal structure of mouse comt bound to an inhibitor 0.7427 546 717
6o65-assembly4.cif.gz_H crystal structure of arabidopsis thaliana spermidine synthase isoform 1 (atspds1) in complex with decarboxylated s-adenosylmethionine and cyclohexylamine 0.7266 482 717
7xif-assembly2.cif.gz_D crystal structure of the aminopropyltransferase, spee from hyperthermophilic crenarchaeon, pyrobaculum calidifontis in complex with 5'-methylthioadenosine (mta) alone or together with spermidine or thermospermine 0.7176 483 715
ID Description Score Start End Superfamily
af_Q2FXH1_4_180_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.7401 25 205 1.20.1250.20
4pyjA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7145 544 660 3.40.50.150
af_A1Y9I9_44_257_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7053 544 717 3.40.50.150
af_Q2FZP8_207_396_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.7044 23 218 1.20.1250.20
af_Q2FXH1_4_180_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.7009 25 205 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A7Y0LCH9-F1-model_v4 Fused MFS/spermidine synthase 0.9209 24 753 GO:0006596
GO:0016020
AF-A0A2V9KM88-F1-model_v4 Ferrichrome ABC transporter permease 0.9208 25 753 GO:0006596
GO:0016020
AF-A0A6N6T3Z1-F1-model_v4 Spermidine synthase 0.9195 20 753 GO:0006596
GO:0016020
AF-A0A7Y0LCH9-F1-model_v4 Fused MFS/spermidine synthase 0.917 24 753 GO:0006596
GO:0016020
AF-A0A523LVY7-F1-model_v4 deleted 0.9167 23 753

Map