F381327

General Info

Members Datasets Scaffolds Average Seq Length
276 187 254 605

Family's Representative Sequence

Representative Sequence 3300046506|Ga0495583_0000058|Ga0495583_0000058_107156_109123
Length 655
Sequence MTEPFDLHQFSGLTSADAAVSVKQALLWCRKENRMNASPQIDPPGAALRSIATLGELFAWRAGRTPHAVAYRQYDAAAGQWRSHTWSEVQLRVQRWQRAIGALMLGAGARVGILLPNGVDAVCADQAVLSLGLVPVPMHALDNPASIRYILDDCQVALLLTANQQQWRAIAAGGDAPAHLRLVVTLQECDVAPLEEQPPMVSLNAWLDSRGDLWSTPRRVAGSDLAAIVYTSGTTGKPKGVMLTHANVLANLRAVLARVPVRPDDVFLSLLPLSHTFERTIGYYLPLAAGASVAYARSAAQLAEDLLAVRPTVLVAVPRVYEKFHTAVEDHLAAAGRGARLLHGLALRVGWRRFCRRQGLPGGAGSALADALLWPVLERLVARTVRARFGGRLRAAISGGAPLPPAVAQGLLAMQLPLLQGYGMTECAPVVAANGIDDNWPASVGRPLEGTEVRLGERDELQVRSASVMRGYWGRPEDTRRAISADGWLNTGDQAAIEQGRIRIVGRLKDILVTSNGEKIAAADVEQAMLADTLFAQVMAVGDNRPYLSAVVVLNPRQWQALAPQLALDPGQPASLTAPAAQALLLKRVREACAALPRHAVPRAIHAVTEPWTVENSLLTPTLKLKRNNLMARYAPQIDALYAARDSRQPQELVP

Samples

Sample ID Description Type Environment
1 2547132374 Acidovorax radicis N35 Isolate Unclassified
2 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
3 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
4 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
5 2643221570 Acidovorax sp. Root568 Isolate Unclassified
6 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
7 2643221596 Acidovorax sp. Root70 Isolate Unclassified
8 2643221609 Acidovorax sp. Root217 Isolate Unclassified
9 2643221611 Acidovorax sp. Root219 Isolate Unclassified
10 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
11 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
12 2643221652 Acidovorax sp. Root402 Isolate Unclassified
13 2643221717 Acidovorax sp. Root267 Isolate Unclassified
14 2721755523 Delftia sp. HK171 Isolate Unclassified
15 2738543012 Acidovorax sp. CF301 Isolate Unclassified
16 2816332133 Acidovorax radicis 2721A Isolate Unclassified
17 2818991436 Collimonas arenae 515 Isolate Unclassified
18 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
19 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
20 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
21 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
22 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
23 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
24 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
25 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
26 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
27 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
28 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
29 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
30 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
31 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
32 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
33 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
34 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
35 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
36 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
52 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
53 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
54 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
55 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
58 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
60 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
61 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
62 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
64 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
65 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
67 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
84 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
85 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
86 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
87 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
88 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
89 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
90 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
91 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
96 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
97 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
100 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
101 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
102 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
103 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
104 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
105 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
107 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
108 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
109 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
110 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
111 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
112 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
113 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
114 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
115 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
116 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
117 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
118 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
119 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
120 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
121 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
122 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
123 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
124 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
125 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
128 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
129 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
133 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
134 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
135 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
136 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
137 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
138 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
139 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
140 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
141 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
142 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
143 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
144 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
145 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
146 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
147 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
148 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
149 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
150 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
151 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
152 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
153 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
154 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
155 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
156 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
159 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
160 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
173 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
174 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
175 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
178 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
181 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
182 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
183 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
184 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
185 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
186 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
187 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.67
Metatranscriptomes 0.36
Isolates 7.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.06
Nodule 1.09
Rhizoplane 1.09
Rhizosphere 70.29
Stem 0
Stem Tuber 0
Unclassified 18.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000121 3300002705 Bacteria 56667
2 JGI25162J39368_1002470 3300002737 Bacteria 7142
3 JGI25157J39369_1000015 3300002741 Bacteria 194042
4 JGI25152J39213_1000831 3300002773 Bacteria 15321
5 JGI25153J46596_10006838 3300003215 Bacteria 5703
6 rootH1_10020386 3300003316 Bacteria 4598
7 rootH2_10063836 3300003320 Bacteria 10724
8 rootH2_10162277 3300003320 Unclassified 2465
9 rootL2_10050927 3300003322 Bacteria 4195
10 rootH1_10002693 3300003323 Bacteria 17641
11 rootH1_10012771 3300003323 Bacteria 8829
12 rootH1_10123891 3300003323 Bacteria 8940
13 rootH1_10267218 3300003323 Bacteria 3066
14 Ga0055539_1000051 3300003752 Bacteria 175048
15 Ga0055539_1001608 3300003752 Bacteria 4069
16 Ga0055533_1000025 3300003756 Bacteria 332208
17 Ga0055531_10000680 3300003794 Bacteria 29030
18 Ga0070680_100019521 3300005336 Bacteria 5371
19 Ga0070660_100068592 3300005339 Bacteria 2764
20 Ga0070681_10011099 3300005458 Bacteria 8914
21 Ga0070681_10035885 3300005458 Unclassified 4980
22 Ga0068853_100052599 3300005539 Bacteria 3508
23 Ga0068855_100000805 3300005563 Bacteria 38816
24 Ga0068857_100003674 3300005577 Bacteria 12858
25 Ga0068854_100020045 3300005578 Bacteria 4515
26 Ga0068856_100039391 3300005614 Bacteria 4640
27 Ga0068864_100030026 3300005618 Bacteria 4607
28 Ga0068858_100000215 3300005842 Bacteria 62428
29 Ga0068860_100000377 3300005843 Bacteria 58377
30 Ga0079104_1000051 3300006946 Bacteria 171217
31 Ga0105240_10004527 3300009093 Bacteria 21123
32 Ga0105240_10009839 3300009093 Bacteria 13495
33 Ga0105243_10001580 3300009148 Bacteria 19898
34 Ga0105243_10063146 3300009148 Bacteria 2968
35 Ga0105248_10027944 3300009177 Bacteria 6281
36 Ga0157369_10018152 3300013105 Bacteria 7891
37 Ga0163162_10025567 3300013306 Bacteria 5835
38 Ga0182006_1006917 3300015261 Bacteria 5225
39 Ga0182007_10006945 3300015262 Bacteria 4807
40 Ga0182005_1000327 3300015265 Bacteria 28182
41 Ga0213871_10003200 3300021441 Bacteria 3126
42 Ga0209674_100007 3300025226 Bacteria 1077082
43 Ga0209563_100052 3300025230 Bacteria 334307
44 Ga0209437_100072 3300025233 Bacteria 305152
45 Ga0209258_100617 3300025242 Bacteria 28339
46 Ga0207425_1000444 3300025245 Bacteria 27112
47 Ga0209646_1000275 3300025246 Bacteria 46578
48 Ga0209026_1000021 3300025250 Bacteria 375165
49 Ga0209026_1004840 3300025250 Bacteria 3830
50 Ga0209677_100015 3300025253 Bacteria 532137
51 Ga0209677_100168 3300025253 Bacteria 56142
52 Ga0209759_1000025 3300025256 Bacteria 317082
53 Ga0209759_1001224 3300025256 Bacteria 15709
54 Ga0209129_1000012 3300025258 Bacteria 541516
55 Ga0209564_1000022 3300025295 Bacteria 555109
56 Ga0209758_1000078 3300025297 Bacteria 266153
57 Ga0209758_1000198 3300025297 Bacteria 133584
58 Ga0209050_1000517 3300025298 Bacteria 64833
59 Ga0209051_1000346 3300025303 Bacteria 69226
60 Ga0209257_1000396 3300025304 Bacteria 86000
61 Ga0207695_10002747 3300025913 Bacteria 25666
62 Ga0207695_10033939 3300025913 Bacteria 5556
63 Ga0207660_10044682 3300025917 Unclassified 3117
64 Ga0207657_10042216 3300025919 Bacteria 4025
65 Ga0207694_10012961 3300025924 Bacteria 6278
66 Ga0207709_10000363 3300025935 Bacteria 45700
67 Ga0207709_10046760 3300025935 Bacteria 2628
68 Ga0207667_10004366 3300025949 Bacteria 17315
69 Ga0207703_10000719 3300026035 Bacteria 32557
70 Ga0207702_10000526 3300026078 Bacteria 42901
71 Ga0207641_10000255 3300026088 Bacteria 67770
72 Ga0207674_10006699 3300026116 Bacteria 13528
73 Ga0209281_1000005 3300027111 Bacteria 1242284
74 Ga0268266_10055585 3300028379 Bacteria 3403
75 Ga0268264_10000370 3300028381 Bacteria 66454
76 Ga0265336_10000380 3300028666 Bacteria 28330
77 Ga0265336_10004079 3300028666 Bacteria 5567
78 Ga0265338_10000024 3300028800 Bacteria 297778
79 Ga0265338_10003805 3300028800 Bacteria 20971
80 Ga0265324_10000002 3300029957 Bacteria 382754
81 Ga0265324_10000118 3300029957 Bacteria 62790
82 Ga0307511_10006639 3300030521 Bacteria 11666
83 Ga0265330_10000344 3300031235 Bacteria 33165
84 Ga0265330_10006193 3300031235 Bacteria 5922
85 Ga0265330_10012468 3300031235 Bacteria 3975
86 Ga0265332_10000002 3300031238 Bacteria 709510
87 Ga0265332_10000023 3300031238 Bacteria 211994
88 Ga0265328_10000430 3300031239 Bacteria 19685
89 Ga0265325_10000298 3300031241 Bacteria 34795
90 Ga0265325_10004553 3300031241 Bacteria 8733
91 Ga0265325_10016484 3300031241 Bacteria 4131
92 Ga0265325_10021368 3300031241 Bacteria 3556
93 Ga0265331_10000012 3300031250 Bacteria 297201
94 Ga0265331_10005174 3300031250 Bacteria 7927
95 Ga0265327_10000173 3300031251 Bacteria 138925
96 Ga0265327_10000458 3300031251 Bacteria 73095
97 Ga0265327_10000512 3300031251 Bacteria 67274
98 Ga0265327_10010013 3300031251 Bacteria 6741
99 Ga0307509_10001262 3300031507 Bacteria 42913
100 Ga0307408_100000198 3300031548 Bacteria 65578
101 Ga0307408_100084022 3300031548 Bacteria 2387
102 Ga0307514_10002044 3300031649 Bacteria 21803
103 Ga0307514_10010886 3300031649 Bacteria 7595
104 Ga0316575_10022338 3300031665 Bacteria 2440
105 Ga0316579_10000016 3300031691 Bacteria 39681
106 Ga0316579_10000273 3300031691 Bacteria 15884
107 Ga0265314_10000012 3300031711 Bacteria 415184
108 Ga0265314_10000401 3300031711 Bacteria 58807
109 Ga0265314_10075028 3300031711 Bacteria 2251
110 Ga0316578_10019061 3300031728 Bacteria 3770
111 Ga0316578_10027611 3300031728 Bacteria 3209
112 Ga0316577_10003405 3300031733 Bacteria 8026
113 Ga0307406_10002690 3300031901 Bacteria 9687
114 Ga0316583_10001079 3300032133 Bacteria 8861
115 Ga0316583_10005467 3300032133 Bacteria 4557
116 Ga0316585_10003823 3300032137 Bacteria 4164
117 Ga0316580_10001704 3300032139 Bacteria 5850
118 Ga0316593_10011612 3300032168 Bacteria 2564
119 Ga0373952_0000934 3300035092 Bacteria 5312
120 Ga0316574_0002549 3300035398 Bacteria 9164
121 Ga0316574_0029281 3300035398 Bacteria 3325
122 Ga0316574_0031611 3300035398 Bacteria 3211
123 Ga0373931_0005567 3300035691 Bacteria 5839
124 Ga0316582_0001818 3300036647 Bacteria 9643
125 Ga0316582_0002571 3300036647 Bacteria 8595
126 Ga0316582_0006019 3300036647 Bacteria 6322
127 Ga0316582_0012092 3300036647 Bacteria 4804
128 Ga0316582_0013701 3300036647 Bacteria 4572
129 Ga0316584_0002325 3300036712 Bacteria 11975
130 Ga0316584_0002351 3300036712 Bacteria 11927
131 Ga0316584_0026428 3300036712 Bacteria 4266
132 Ga0316584_0056450 3300036712 Bacteria 2939
133 Ga0316584_0065106 3300036712 Bacteria 2730
134 Ga0400484_22545 3300038725 Bacteria 8060
135 Ga0400484_29430 3300038725 Bacteria 14388
136 Ga0400490_20093 3300038726 Bacteria 5789
137 Ga0400490_26734 3300038726 Bacteria 11513
138 Ga0400490_44689 3300038726 Bacteria 39357
139 Ga0400490_48290 3300038726 Bacteria 14408
140 Ga0400485_05234 3300038735 Bacteria 82426
141 Ga0400488_48384 3300038741 Unclassified 2189
142 Ga0400486_25802 3300038742 Bacteria 2077
143 Ga0400486_29544 3300038742 Bacteria 39657
144 Ga0400483_043935 3300039062 Bacteria 25964
145 Ga0400483_044418 3300039062 Bacteria 4715
146 Ga0400483_164706 3300039062 Bacteria 2947
147 Ga0400483_288938 3300039062 Bacteria 4476
148 Ga0400487_14557 3300039110 Bacteria 4063
149 Ga0436361_0414554 3300039447 Bacteria 6550
150 Ga0451577_0000002 3300042876 Bacteria 1731375
151 Ga0451577_0012220 3300042876 Bacteria 8069
152 Ga0451577_0033986 3300042876 Bacteria 4598
153 Ga0466969_0000001 3300044656 Bacteria 189617
154 Ga0466969_0004888 3300044656 Bacteria 7138
155 Ga0453683_0000003 3300044673 Bacteria 942572
156 Ga0466966_0017753 3300044684 Bacteria 4697
157 Ga0466961_0000708 3300044693 Bacteria 20977
158 Ga0466961_0005224 3300044693 Bacteria 8174
159 Ga0466961_0029384 3300044693 Bacteria 3534
160 Ga0466963_0008939 3300044694 Bacteria 6013
161 Ga0466964_0000409 3300044706 Bacteria 12991
162 Ga0466964_0003068 3300044706 Bacteria 6067
163 Ga0453684_0000002 3300044712 Bacteria 1731375
164 Ga0453684_0000029 3300044712 Bacteria 757969
165 Ga0453684_0023005 3300044712 Bacteria 9213
166 Ga0453684_0199456 3300044712 Bacteria 2334
167 Ga0466971_0031831 3300044719 Bacteria 2362
168 Ga0466968_0036260 3300044735 Bacteria 2066
169 Ga0466970_0003373 3300044765 Bacteria 7773
170 Ga0466970_0007614 3300044765 Bacteria 5428
171 Ga0466970_0048450 3300044765 Bacteria 2265
172 Ga0466959_0000259 3300045049 Bacteria 32496
173 Ga0451576_0000004 3300045051 Bacteria 1312238
174 Ga0451576_0001181 3300045051 Bacteria 46821
175 Ga0451576_0001427 3300045051 Bacteria 40849
176 Ga0451576_0002913 3300045051 Bacteria 24385
177 Ga0451576_0017607 3300045051 Bacteria 7852
178 Ga0466958_0063645 3300045836 Bacteria 2249
179 Ga0466967_0092756 3300045976 Bacteria 2746
180 Ga0495592_0007361 3300046454 Bacteria 8236
181 Ga0495638_0000030 3300046460 Bacteria 318183
182 Ga0495651_0011316 3300046462 Bacteria 6856
183 Ga0495651_0017526 3300046462 Bacteria 5547
184 Ga0495650_0001993 3300046471 Bacteria 17935
185 Ga0495650_0009775 3300046471 Bacteria 5424
186 Ga0495639_0010591 3300046475 Bacteria 3971
187 Ga0495583_0000058 3300046506 Bacteria 200120
188 Ga0495583_0000596 3300046506 Bacteria 49267
189 Ga0495606_0005197 3300046507 Bacteria 12574
190 Ga0495608_0022336 3300046511 Bacteria 4337
191 Ga0495628_0000315 3300046516 Bacteria 43763
192 Ga0495628_0012451 3300046516 Bacteria 7173
193 Ga0495648_0000009 3300046524 Bacteria 317193
194 Ga0495652_0012950 3300046529 Bacteria 7517
195 Ga0495609_0001271 3300046538 Bacteria 17233
196 Ga0495645_0009598 3300046543 Bacteria 6769
197 Ga0495622_0000114 3300046557 Bacteria 69691
198 Ga0495633_0000041 3300046558 Bacteria 176298
199 Ga0495633_0000933 3300046558 Bacteria 24693
200 Ga0495623_0006350 3300046679 Bacteria 7682
201 Ga0495646_0003227 3300046680 Bacteria 10141
202 Ga0495624_0012122 3300046690 Bacteria 5904
203 Ga0495649_0001161 3300046694 Bacteria 20440
204 Ga0495604_0029110 3300047317 Bacteria 4395
205 Ga0495602_0018753 3300048088 Bacteria 6896
206 Ga0496104_0188038 3300048907 Bacteria 1976
207 Ga0496106_0093289 3300048909 Bacteria 2326
208 Ga0496112_0005786 3300048915 Bacteria 10753
209 Ga0496125_0000758 3300048928 Bacteria 52882
210 Ga0496126_0015328 3300048929 Bacteria 7713
211 Ga0501031_0023867 3300049568 Bacteria 3988
212 Ga0501032_0000146 3300049569 Bacteria 57593
213 Ga0501032_0033520 3300049569 Bacteria 3518
214 Ga0501033_0000459 3300049570 Bacteria 38647
215 Ga0501033_0001978 3300049570 Bacteria 17854
216 Ga0501033_0037661 3300049570 Bacteria 3619
217 Ga0501034_0054417 3300049571 Bacteria 4028
218 Ga0501034_0107097 3300049571 Bacteria 2788
219 Ga0501036_0013435 3300049572 Bacteria 6804
220 Ga0501037_0000311 3300049573 Bacteria 41277
221 Ga0501037_0005006 3300049573 Bacteria 9636
222 Ga0501038_0002219 3300049574 Bacteria 18067
223 Ga0501038_0003421 3300049574 Bacteria 14793
224 Ga0501038_0013141 3300049574 Bacteria 7551
225 Ga0501038_0016375 3300049574 Bacteria 6720
226 Ga0501038_0025839 3300049574 Bacteria 5232
227 Ga0501038_0096117 3300049574 Bacteria 2474
228 Ga0501039_0119743 3300049575 Bacteria 2062
229 Ga0501039_0181152 3300049575 Bacteria 1657
230 Ga0501040_0008443 3300049576 Bacteria 6692
231 Ga0501043_0003300 3300049579 Bacteria 13289
232 Ga0501043_0016314 3300049579 Bacteria 5825
233 Ga0501046_0026354 3300049580 Bacteria 4749
234 Ga0501048_0032150 3300049582 Bacteria 3793
235 Ga0501068_0000578 3300049584 Bacteria 18627
236 Ga0501074_0002548 3300049590 Bacteria 12714
237 Ga0501075_0067499 3300049591 Bacteria 2701
238 Ga0501076_0020630 3300049592 Bacteria 5045
239 Ga0501080_0015808 3300049742 Bacteria 6962
240 Ga0501081_0035715 3300049743 Bacteria 3384
241 Ga0501035_0000180 3300049822 Bacteria 77333
242 Ga0501035_0024114 3300049822 Bacteria 5581
243 Ga0501035_0056513 3300049822 Bacteria 3501
244 Ga0501044_0000289 3300049823 Bacteria 64276
245 Ga0501044_0006538 3300049823 Bacteria 12868
246 Ga0501045_0017976 3300049824 Bacteria 5021
247 Ga0500586_000048 3300053145 Bacteria 21134
248 Ga0500619_002672 3300053154 Bacteria 3483
249 Ga0500622_0000525 3300053156 Bacteria 35545
250 Ga0500637_0036967 3300053178 Unclassified 2742
251 Ga0501084_0073843 3300054114 Bacteria 2856
252 Ga0466962_0000339 3300061719 Bacteria 20068
253 Ga0530510_0033170 3300061734 Bacteria 3717
254 Ga0530510_0130391 3300061734 Bacteria 1849

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049575 Ga0501039_0181152 Ga0501039_0181152_174_1640 459
2 3300049592 Ga0501076_0020630 Ga0501076_0020630_347_1954 505
3 3300061734 Ga0530510_0033170 Ga0530510_0033170_1871_3478 505
4 3300061734 Ga0530510_0130391 Ga0530510_0130391_222_1829 505
5 3300038741 Ga0400488_48384 Ga0400488_48384_352_1965 507
6 3300003323 rootH1_10123891 rootH1_1012389110 522
7 3300036647 Ga0316582_0006019 Ga0316582_0006019_4641_6287 526
8 3300049568 Ga0501031_0023867 Ga0501031_0023867_1100_2776 529
9 3300031649 Ga0307514_10002044 Ga0307514_1000204415 542
10 3300045051 Ga0451576_0002913 Ga0451576_0002913_8958_10700 542
11 3300031548 Ga0307408_100084022 Ga0307408_1000840222 543
12 3300031548 Ga0307408_100000198 Ga0307408_1000001986 544
13 3300031901 Ga0307406_10002690 Ga0307406_100026907 544
14 3300032168 Ga0316593_10011612 Ga0316593_100116122 546
15 3300042876 Ga0451577_0000002 Ga0451577_0000002_609748_611553 551
16 3300044673 Ga0453683_0000003 Ga0453683_0000003_609748_611553 551
17 3300044712 Ga0453684_0000002 Ga0453684_0000002_1119823_1121628 551
18 3300045051 Ga0451576_0000004 Ga0451576_0000004_746463_748268 551
19 3300029957 Ga0265324_10000118 Ga0265324_1000011846 552
20 3300031241 Ga0265325_10021368 Ga0265325_100213681 552
21 3300031711 Ga0265314_10000401 Ga0265314_1000040112 552
22 3300044712 Ga0453684_0199456 Ga0453684_0199456_201_2042 554
23 3300044656 Ga0466969_0000001 Ga0466969_0000001_18960_20771 558
24 3300038725 Ga0400484_29430 Ga0400484_29430_5513_7291 559
25 3300044693 Ga0466961_0029384 Ga0466961_0029384_607_2418 559
26 3300049574 Ga0501038_0003421 Ga0501038_0003421_10420_12234 559
27 3300003316 rootH1_10020386 rootH1_100203863 561
28 3300031691 Ga0316579_10000273 Ga0316579_100002736 562
29 3300038726 Ga0400490_20093 Ga0400490_20093_212_2005 563
30 3300039110 Ga0400487_14557 Ga0400487_14557_2221_4014 563
31 3300025298 Ga0209050_1000517 Ga0209050_100051712 565
32 3300053156 Ga0500622_0000525 Ga0500622_0000525_22327_24177 565
33 3300031235 Ga0265330_10000344 Ga0265330_100003443 566
34 3300031238 Ga0265332_10000002 Ga0265332_10000002293 566
35 3300031241 Ga0265325_10004553 Ga0265325_100045532 566
36 3300031711 Ga0265314_10000012 Ga0265314_1000001292 566
37 3300035691 Ga0373931_0005567 Ga0373931_0005567_3677_5560 571
38 3300038726 Ga0400490_44689 Ga0400490_44689_20688_22481 572
39 3300038726 Ga0400490_48290 Ga0400490_48290_4720_6513 572
40 3300038742 Ga0400486_25802 Ga0400486_25802_146_1939 572
41 3300039062 Ga0400483_043935 Ga0400483_043935_2536_4329 572
42 3300039062 Ga0400483_288938 Ga0400483_288938_2660_4453 572
43 3300038726 Ga0400490_26734 Ga0400490_26734_815_2644 574
44 3300048909 Ga0496106_0093289 Ga0496106_0093289_107_1912 574
45 3300049569 Ga0501032_0033520 Ga0501032_0033520_329_2131 574
46 3300049573 Ga0501037_0005006 Ga0501037_0005006_98_1900 574
47 3300049580 Ga0501046_0026354 Ga0501046_0026354_1047_2849 574
48 3300049591 Ga0501075_0067499 Ga0501075_0067499_857_2659 574
49 3300003323 rootH1_10267218 rootH1_102672183 575
50 3300028666 Ga0265336_10004079 Ga0265336_100040794 575
51 3300029957 Ga0265324_10000002 Ga0265324_10000002289 575
52 3300030521 Ga0307511_10006639 Ga0307511_100066397 575
53 3300031241 Ga0265325_10000298 Ga0265325_1000029828 575
54 3300031691 Ga0316579_10000016 Ga0316579_1000001614 575
55 3300036647 Ga0316582_0012092 Ga0316582_0012092_1863_3665 575
56 3300036712 Ga0316584_0002351 Ga0316584_0002351_8281_10080 575
57 3300042876 Ga0451577_0012220 Ga0451577_0012220_1960_3765 575
58 3300044712 Ga0453684_0000029 Ga0453684_0000029_600973_602778 575
59 3300045051 Ga0451576_0001181 Ga0451576_0001181_30309_32114 575
60 3300045051 Ga0451576_0001427 Ga0451576_0001427_13465_15270 575
61 3300045051 Ga0451576_0017607 Ga0451576_0017607_2783_4588 575
62 3300049574 Ga0501038_0002219 Ga0501038_0002219_1756_3558 575
63 3300049590 Ga0501074_0002548 Ga0501074_0002548_3364_5169 575
64 3300049742 Ga0501080_0015808 Ga0501080_0015808_4636_6441 575
65 3300053178 Ga0500637_0036967 Ga0500637_0036967_143_1930 575
66 3300031239 Ga0265328_10000430 Ga0265328_100004303 576
67 3300031250 Ga0265331_10000012 Ga0265331_10000012108 576
68 3300031250 Ga0265331_10005174 Ga0265331_100051746 576
69 3300031251 Ga0265327_10000173 Ga0265327_1000017325 576
70 3300031251 Ga0265327_10000458 Ga0265327_1000045849 576
71 3300031665 Ga0316575_10022338 Ga0316575_100223382 576
72 3300031728 Ga0316578_10019061 Ga0316578_100190612 576
73 3300031733 Ga0316577_10003405 Ga0316577_100034059 576
74 3300032133 Ga0316583_10001079 Ga0316583_100010794 576
75 3300032133 Ga0316583_10005467 Ga0316583_100054673 576
76 3300032137 Ga0316585_10003823 Ga0316585_100038232 576
77 3300032139 Ga0316580_10001704 Ga0316580_100017043 576
78 3300035398 Ga0316574_0002549 Ga0316574_0002549_2852_4681 576
79 3300035398 Ga0316574_0029281 Ga0316574_0029281_246_2075 576
80 3300035398 Ga0316574_0031611 Ga0316574_0031611_98_1930 576
81 3300036647 Ga0316582_0002571 Ga0316582_0002571_6058_7860 576
82 3300036712 Ga0316584_0026428 Ga0316584_0026428_984_2813 576
83 3300042876 Ga0451577_0033986 Ga0451577_0033986_1378_3234 576
84 3300044712 Ga0453684_0023005 Ga0453684_0023005_5743_7599 576
85 3300049569 Ga0501032_0000146 Ga0501032_0000146_2993_4855 576
86 3300049570 Ga0501033_0000459 Ga0501033_0000459_14945_16759 576
87 3300049570 Ga0501033_0001978 Ga0501033_0001978_10322_12136 576
88 3300049570 Ga0501033_0037661 Ga0501033_0037661_192_2054 576
89 3300049571 Ga0501034_0054417 Ga0501034_0054417_1947_3809 576
90 3300049572 Ga0501036_0013435 Ga0501036_0013435_4407_6269 576
91 3300049573 Ga0501037_0000311 Ga0501037_0000311_38199_40061 576
92 3300049574 Ga0501038_0013141 Ga0501038_0013141_5470_7332 576
93 3300049574 Ga0501038_0016375 Ga0501038_0016375_3777_5591 576
94 3300049574 Ga0501038_0025839 Ga0501038_0025839_239_2053 576
95 3300049574 Ga0501038_0096117 Ga0501038_0096117_393_2255 576
96 3300049575 Ga0501039_0119743 Ga0501039_0119743_66_1880 576
97 3300049576 Ga0501040_0008443 Ga0501040_0008443_289_2151 576
98 3300049579 Ga0501043_0003300 Ga0501043_0003300_4244_6106 576
99 3300049579 Ga0501043_0016314 Ga0501043_0016314_766_2580 576
100 3300049582 Ga0501048_0032150 Ga0501048_0032150_55_1917 576
101 3300049584 Ga0501068_0000578 Ga0501068_0000578_4365_6227 576
102 3300049822 Ga0501035_0000180 Ga0501035_0000180_47810_49624 576
103 3300049822 Ga0501035_0024114 Ga0501035_0024114_1984_3798 576
104 3300049823 Ga0501044_0000289 Ga0501044_0000289_7217_9031 576
105 3300049823 Ga0501044_0006538 Ga0501044_0006538_9804_11666 576
106 3300031728 Ga0316578_10027611 Ga0316578_100276112 577
107 3300036647 Ga0316582_0001818 Ga0316582_0001818_58_1866 577
108 3300036712 Ga0316584_0002325 Ga0316584_0002325_3019_4827 577
109 3300036712 Ga0316584_0056450 Ga0316584_0056450_955_2763 577
110 3300036712 Ga0316584_0065106 Ga0316584_0065106_590_2398 577
111 iso_pu_bacteria 2588253510 2588295589 577
112 3300002773 JGI25152J39213_1000831 JGI25152J39213_100083111 578
113 3300005458 Ga0070681_10011099 Ga0070681_100110993 578
114 3300025245 Ga0207425_1000444 Ga0207425_100044429 578
115 3300025258 Ga0209129_1000012 Ga0209129_100001292 578
116 3300025295 Ga0209564_1000022 Ga0209564_1000022422 578
117 3300025297 Ga0209758_1000198 Ga0209758_1000198105 578
118 3300031251 Ga0265327_10010013 Ga0265327_100100136 578
119 3300003215 JGI25153J46596_10006838 JGI25153J46596_100068382 579
120 3300003320 rootH2_10162277 rootH2_101622772 579
121 3300025297 Ga0209758_1000078 Ga0209758_100007826 579
122 3300003323 rootH1_10012771 rootH1_100127718 580
123 3300003752 Ga0055539_1000051 Ga0055539_1000051101 580
124 3300003756 Ga0055533_1000025 Ga0055533_100002599 580
125 3300005539 Ga0068853_100052599 Ga0068853_1000525993 580
126 3300005842 Ga0068858_100000215 Ga0068858_10000021524 580
127 3300005843 Ga0068860_100000377 Ga0068860_10000037723 580
128 3300013306 Ga0163162_10025567 Ga0163162_100255674 580
129 3300025226 Ga0209674_100007 Ga0209674_100007459 580
130 3300025230 Ga0209563_100052 Ga0209563_100052152 580
131 3300025253 Ga0209677_100015 Ga0209677_100015332 580
132 3300026035 Ga0207703_10000719 Ga0207703_100007198 580
133 3300026088 Ga0207641_10000255 Ga0207641_1000025541 580
134 3300028381 Ga0268264_10000370 Ga0268264_1000037029 580
135 3300036647 Ga0316582_0013701 Ga0316582_0013701_2470_4254 580
136 3300038735 Ga0400485_05234 Ga0400485_05234_61483_63309 580
137 3300038742 Ga0400486_29544 Ga0400486_29544_16694_18520 580
138 3300048928 Ga0496125_0000758 Ga0496125_0000758_24734_26515 580
139 3300048929 Ga0496126_0015328 Ga0496126_0015328_789_2570 580
140 3300035092 Ga0373952_0000934 Ga0373952_0000934_2022_3836 581
141 3300038725 Ga0400484_22545 Ga0400484_22545_5525_7375 581
142 3300039062 Ga0400483_044418 Ga0400483_044418_2678_4528 581
143 3300039062 Ga0400483_164706 Ga0400483_164706_1042_2892 581
144 iso_pu_bacteria 2588253510 2588293448 581
145 3300049822 Ga0501035_0056513 Ga0501035_0056513_501_2357 582
146 3300003320 rootH2_10063836 rootH2_100638363 583
147 3300039447 Ga0436361_0414554 Ga0436361_0414554_1238_3058 585
148 iso_pu_bacteria 2585428057 2587729725 585
149 iso_pu_bacteria 2585428058 2587734187 585
150 3300005336 Ga0070680_100019521 Ga0070680_1000195212 586
151 3300005458 Ga0070681_10035885 Ga0070681_100358853 586
152 3300009093 Ga0105240_10004527 Ga0105240_1000452711 586
153 3300013105 Ga0157369_10018152 Ga0157369_100181524 586
154 3300021441 Ga0213871_10003200 Ga0213871_100032002 586
155 3300025256 Ga0209759_1001224 Ga0209759_100122414 586
156 3300025913 Ga0207695_10033939 Ga0207695_100339395 586
157 3300025917 Ga0207660_10044682 Ga0207660_100446824 586
158 3300031251 Ga0265327_10000512 Ga0265327_1000051229 586
159 3300046558 Ga0495633_0000933 Ga0495633_0000933_7848_9704 587
160 iso_pu_bacteria 2818991445 2819593587 587
161 3300031649 Ga0307514_10010886 Ga0307514_100108865 588
162 iso_pu_bacteria 2547132374 2548497481 588
163 iso_pu_bacteria 2643221596 2643993179 588
164 iso_pu_bacteria 2643221717 2644647397 588
165 iso_pu_bacteria 2990710928 2990712385 588
166 iso_pu_bacteria 2643221592 2643968266 589
167 iso_pu_bacteria 2643221609 2644061866 589
168 iso_pu_bacteria 2643221611 2644073551 589
169 iso_pu_bacteria 2643221625 2644143581 589
170 iso_pu_bacteria 2643221648 2644272044 589
171 iso_pu_bacteria 2738543012 2739243013 589
172 iso_pu_bacteria 2816332133 2816473296 589
173 3300003794 Ga0055531_10000680 Ga0055531_1000068023 590
174 3300025303 Ga0209051_1000346 Ga0209051_100034637 590
175 3300025304 Ga0209257_1000396 Ga0209257_100039678 590
176 iso_pu_bacteria 2643221570 2643865897 590
177 iso_pu_bacteria 2643221652 2644294230 590
178 iso_pu_bacteria 2894023352 2894025640 590
179 3300044656 Ga0466969_0004888 Ga0466969_0004888_3851_5668 591
180 3300044684 Ga0466966_0017753 Ga0466966_0017753_1687_3504 591
181 3300044693 Ga0466961_0000708 Ga0466961_0000708_3625_5442 591
182 3300044706 Ga0466964_0000409 Ga0466964_0000409_7622_9439 591
183 3300044719 Ga0466971_0031831 Ga0466971_0031831_286_2103 591
184 3300044735 Ga0466968_0036260 Ga0466968_0036260_85_1902 591
185 3300044765 Ga0466970_0003373 Ga0466970_0003373_4017_5831 591
186 3300044765 Ga0466970_0048450 Ga0466970_0048450_229_2046 591
187 3300049571 Ga0501034_0107097 Ga0501034_0107097_933_2777 591
188 3300061719 Ga0466962_0000339 Ga0466962_0000339_5147_6964 591
189 iso_pu_bacteria 2818991436 2819541425 591
190 3300002737 JGI25162J39368_1002470 JGI25162J39368_10024702 592
191 3300025233 Ga0209437_100072 Ga0209437_10007286 592
192 3300049743 Ga0501081_0035715 Ga0501081_0035715_190_2058 592
193 3300049824 Ga0501045_0017976 Ga0501045_0017976_56_1924 592
194 3300054114 Ga0501084_0073843 Ga0501084_0073843_867_2735 592
195 3300005618 Ga0068864_100030026 Ga0068864_1000300262 593
196 3300009177 Ga0105248_10027944 Ga0105248_100279444 593
197 3300028379 Ga0268266_10055585 Ga0268266_100555852 593
198 3300031507 Ga0307509_10001262 Ga0307509_1000126240 593
199 3300048907 Ga0496104_0188038 Ga0496104_0188038_54_1889 593
200 3300048915 Ga0496112_0005786 Ga0496112_0005786_438_2273 593
201 3300031711 Ga0265314_10075028 Ga0265314_100750282 594
202 3300044693 Ga0466961_0005224 Ga0466961_0005224_1485_3323 594
203 3300044694 Ga0466963_0008939 Ga0466963_0008939_2379_4217 594
204 3300044706 Ga0466964_0003068 Ga0466964_0003068_1276_3114 594
205 3300044765 Ga0466970_0007614 Ga0466970_0007614_498_2336 594
206 3300045049 Ga0466959_0000259 Ga0466959_0000259_6975_8813 594
207 3300045836 Ga0466958_0063645 Ga0466958_0063645_133_1971 594
208 3300045976 Ga0466967_0092756 Ga0466967_0092756_307_2145 594
209 3300046462 Ga0495651_0017526 Ga0495651_0017526_210_2084 594
210 3300046511 Ga0495608_0022336 Ga0495608_0022336_2054_3928 594
211 3300046516 Ga0495628_0000315 Ga0495628_0000315_6581_8455 594
212 3300046679 Ga0495623_0006350 Ga0495623_0006350_2368_4242 594
213 3300048088 Ga0495602_0018753 Ga0495602_0018753_1892_3766 594
214 3300015261 Ga0182006_1006917 Ga0182006_10069172 595
215 3300015262 Ga0182007_10006945 Ga0182007_100069452 595
216 3300015265 Ga0182005_1000327 Ga0182005_100032711 595
217 3300031235 Ga0265330_10006193 Ga0265330_100061933 595
218 3300031235 Ga0265330_10012468 Ga0265330_100124682 595
219 3300031241 Ga0265325_10016484 Ga0265325_100164842 595
220 3300046454 Ga0495592_0007361 Ga0495592_0007361_1349_3232 595
221 3300046460 Ga0495638_0000030 Ga0495638_0000030_224694_226559 595
222 3300046462 Ga0495651_0011316 Ga0495651_0011316_1414_3297 595
223 3300046471 Ga0495650_0001993 Ga0495650_0001993_12916_14781 595
224 3300046475 Ga0495639_0010591 Ga0495639_0010591_90_1955 595
225 3300046506 Ga0495583_0000058 Ga0495583_0000058_107156_109123 595
226 3300046516 Ga0495628_0012451 Ga0495628_0012451_1807_3690 595
227 3300046524 Ga0495648_0000009 Ga0495648_0000009_223474_225339 595
228 3300046529 Ga0495652_0012950 Ga0495652_0012950_2316_4205 595
229 3300046538 Ga0495609_0001271 Ga0495609_0001271_8578_10443 595
230 3300046543 Ga0495645_0009598 Ga0495645_0009598_715_2598 595
231 3300046557 Ga0495622_0000114 Ga0495622_0000114_25710_27575 595
232 3300046558 Ga0495633_0000041 Ga0495633_0000041_121733_123598 595
233 3300046680 Ga0495646_0003227 Ga0495646_0003227_4002_5891 595
234 3300046690 Ga0495624_0012122 Ga0495624_0012122_2780_4663 595
235 3300047317 Ga0495604_0029110 Ga0495604_0029110_11_1894 595
236 3300053145 Ga0500586_000048 Ga0500586_000048_560_2428 595
237 3300053154 Ga0500619_002672 Ga0500619_002672_737_2620 595
238 3300025250 Ga0209026_1004840 Ga0209026_10048401 597
239 3300046471 Ga0495650_0009775 Ga0495650_0009775_82_1950 597
240 3300046506 Ga0495583_0000596 Ga0495583_0000596_1329_3197 597
241 3300046507 Ga0495606_0005197 Ga0495606_0005197_8213_10081 597
242 3300046694 Ga0495649_0001161 Ga0495649_0001161_2354_4222 597
243 3300028666 Ga0265336_10000380 Ga0265336_100003807 599
244 3300028800 Ga0265338_10000024 Ga0265338_10000024179 599
245 3300031238 Ga0265332_10000023 Ga0265332_1000002345 599
246 3300006946 Ga0079104_1000051 Ga0079104_100005117 600
247 3300009148 Ga0105243_10001580 Ga0105243_100015801 600
248 3300025935 Ga0207709_10000363 Ga0207709_1000036318 600
249 3300027111 Ga0209281_1000005 Ga0209281_10000051092 600
250 iso_pu_bacteria 2721755523 2722883708 600
251 iso_pu_bacteria 2839138175 2839144575 600
252 3300028800 Ga0265338_10003805 Ga0265338_100038055 601
253 3300009148 Ga0105243_10063146 Ga0105243_100631462 604
254 3300025935 Ga0207709_10046760 Ga0207709_100467602 604
255 3300003322 rootL2_10050927 rootL2_100509272 608
256 3300003323 rootH1_10002693 rootH1_100026937 608
257 3300009093 Ga0105240_10009839 Ga0105240_100098398 612
258 3300025913 Ga0207695_10002747 Ga0207695_1000274720 612
259 3300005563 Ga0068855_100000805 Ga0068855_10000080521 619
260 3300025949 Ga0207667_10004366 Ga0207667_100043664 619
261 3300002705 JGI25156J39149_1000121 JGI25156J39149_10001219 620
262 3300002741 JGI25157J39369_1000015 JGI25157J39369_100001532 620
263 3300003752 Ga0055539_1001608 Ga0055539_10016084 620
264 3300005339 Ga0070660_100068592 Ga0070660_1000685921 620
265 3300005577 Ga0068857_100003674 Ga0068857_1000036742 620
266 3300005578 Ga0068854_100020045 Ga0068854_1000200452 620
267 3300005614 Ga0068856_100039391 Ga0068856_1000393912 620
268 3300025242 Ga0209258_100617 Ga0209258_10061726 620
269 3300025246 Ga0209646_1000275 Ga0209646_100027533 620
270 3300025250 Ga0209026_1000021 Ga0209026_100002133 620
271 3300025253 Ga0209677_100168 Ga0209677_10016849 620
272 3300025256 Ga0209759_1000025 Ga0209759_100002533 620
273 3300025919 Ga0207657_10042216 Ga0207657_100422162 620
274 3300025924 Ga0207694_10012961 Ga0207694_100129614 620
275 3300026078 Ga0207702_10000526 Ga0207702_1000052634 620
276 3300026116 Ga0207674_10006699 Ga0207674_100066995 620

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00501

AMP-binding

AMP-binding enzyme

58

473

0.87

PF23562

509

646

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ipl-assembly3.cif.gz_C crystal structure of o-succinylbenzoic acid-coa ligase from staphylococcus aureus subsp. aureus mu50 0.8493 32 480
5bus-assembly1.cif.gz_A o-succinylbenzoate coenzyme a synthetase (mene) from bacillus subtilis, in complex with amp 0.8483 32 607
5oe4-assembly1.cif.gz_A crystal structure of the n-terminal domain of pqsa in complex with anthraniloyl-amp (crystal form 2) 0.8481 28 483
3wv4-assembly2.cif.gz_B crystal structure of vinn 0.8473 19 479
3wv5-assembly2.cif.gz_B complex structure of vinn with 3-methylaspartate 0.8415 26 477
ID Description Score Start End Superfamily
af_F1R452_566_706_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9478 485 619 3.30.300.30
af_Q20121_588_724_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9439 486 616 3.30.300.30
af_B6SWE6_543_696_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9387 483 619 3.30.300.30
af_Q1ZXQ4_530_673_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.938 483 619 3.30.300.30
af_Q9CAP8_552_691_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9241 485 618 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A356A0K4-F1-model_v4 Long-chain fatty acid--CoA ligase 0.9623 513 619 GO:0004467
GO:0016020
AF-A0A3D3S0W7-F1-model_v4 Long-chain fatty acid--CoA ligase 0.957 464 618 GO:0004467
GO:0016020
AF-A0A7V7X7H1-F1-model_v4 deleted 0.9482 400 620
AF-A0A3D3S0W7-F1-model_v4 Long-chain fatty acid--CoA ligase 0.9392 464 618 GO:0004467
GO:0016020
AF-A0A3B1B0T5-F1-model_v4 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.9338 14 620 GO:0004467
GO:0016020

Feature Viewer

pLDDT pTM Quality
87.63 0.81 High
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Predicted Structure (AlphaFold2)

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