F380240

General Info

Members Datasets Scaffolds Average Seq Length
275 194 550 264

Family's Representative Sequence

Representative Sequence 3300005457|Ga0070662_100060627|Ga0070662_1000606271
Length 291
Sequence MVEVAMAKPFYILRPFRPPPGPAAPQTMSALPTRTVLLVLVTAIAVAGCRSRGEVAAVPGSAESIHADARKDLRNHNFDNAVTRLEALEARYPFSEEAKQGQLDLLYAYYKNREAESAIDQADQFIRENPTHPRVDYAHYIKGLVYFEGGASFLERLFHADISKRPPQEARESFQSFQTLVQQFPKSPYAADARQRMIYLRNKLADYELAVARYYMKRGAFVGAANRARGVIETYDGAPATLDALAVMAEAYRRLGIDDMAVAIDGILAQNRSPDDLDGKPADKPWWRFGF

Samples

Sample ID Description Type Environment
1 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
59 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
107 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
108 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
113 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
114 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
115 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
116 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
117 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
118 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
119 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
120 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
121 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
122 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
123 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
124 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
125 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
126 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
127 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
128 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
129 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
130 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
131 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
132 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
133 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
134 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
135 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
136 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
137 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
138 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
139 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
140 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
141 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
142 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
143 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
144 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
145 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
146 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
147 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
148 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
149 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
150 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
151 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
152 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
153 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
154 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
155 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
156 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
157 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
158 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
159 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
160 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
161 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
162 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
163 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
164 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
170 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
171 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
172 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
173 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
174 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
175 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
176 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
177 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
178 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
179 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
180 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
184 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
185 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
188 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
189 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
190 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
191 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
192 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
193 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
194 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.91
Metatranscriptomes 1.09
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.45
Nodule 0
Rhizoplane 1.45
Rhizosphere 94.91
Stem 0
Stem Tuber 0
Unclassified 7.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070662_100060627 3300005457 Bacteria 2759
2 SwRhRL2b_contig_2061763 2162886007 Bacteria 5978
3 rootH1_10247485 3300003323 Bacteria 5622
4 Ga0065704_10002171 3300005289 Bacteria 7388
5 Ga0065712_10072594 3300005290 Bacteria 4688
6 Ga0065715_10118830 3300005293 Bacteria 2304
7 Ga0065707_10084939 3300005295 Bacteria 6612
8 Ga0070658_10202020 3300005327 Bacteria 1677
9 Ga0070676_10015289 3300005328 Bacteria 4233
10 Ga0070676_10111091 3300005328 Bacteria 1707
11 Ga0070690_100002047 3300005330 Bacteria 10756
12 Ga0068869_100001945 3300005334 Bacteria 12398
13 Ga0070666_10186446 3300005335 Bacteria 1457
14 Ga0070680_100122013 3300005336 Bacteria 2176
15 Ga0070689_100002696 3300005340 Bacteria 11632
16 Ga0070661_100524210 3300005344 Bacteria 951
17 Ga0070692_10027227 3300005345 Bacteria 2832
18 Ga0070668_100001171 3300005347 Bacteria 18549
19 Ga0070668_100364739 3300005347 Bacteria 1226
20 Ga0070669_100042226 3300005353 Bacteria 3318
21 Ga0070675_100001181 3300005354 Bacteria 18965
22 Ga0070675_100156404 3300005354 Bacteria 1957
23 Ga0070674_100010532 3300005356 Bacteria 5595
24 Ga0070673_100012559 3300005364 Bacteria 5819
25 Ga0070673_100251286 3300005364 Bacteria 1541
26 Ga0070688_100025863 3300005365 Bacteria 3480
27 Ga0070705_100045162 3300005440 Bacteria 2534
28 Ga0070694_100301542 3300005444 Bacteria 1228
29 Ga0070678_100090966 3300005456 Bacteria 2340
30 Ga0070662_100003755 3300005457 Bacteria 9504
31 Ga0070681_10069429 3300005458 Bacteria 3490
32 Ga0068867_100132065 3300005459 Unclassified 1942
33 Ga0070685_10011797 3300005466 Bacteria 4581
34 Ga0070679_100038007 3300005530 Bacteria 4784
35 Ga0070684_100002503 3300005535 Bacteria 13539
36 Ga0070672_100036500 3300005543 Bacteria 3745
37 Ga0070672_100133600 3300005543 Bacteria 2042
38 Ga0070686_100027304 3300005544 Bacteria 3454
39 Ga0070695_100403956 3300005545 Bacteria 1036
40 Ga0070696_100008119 3300005546 Bacteria 7019
41 Ga0070665_100015484 3300005548 Bacteria 7662
42 Ga0068855_100115951 3300005563 Bacteria 3070
43 Ga0068855_100564158 3300005563 Bacteria 1231
44 Ga0068857_100012314 3300005577 Bacteria 7443
45 Ga0068857_100213596 3300005577 Bacteria 1761
46 Ga0070702_100002349 3300005615 Bacteria 8132
47 Ga0068859_100004100 3300005617 Bacteria 14861
48 Ga0068866_10045035 3300005718 Bacteria 2210
49 Ga0068866_10104651 3300005718 Bacteria 1568
50 Ga0068861_100016915 3300005719 Bacteria 5170
51 Ga0068861_100048246 3300005719 Bacteria 3218
52 Ga0068861_100063903 3300005719 Bacteria 2830
53 Ga0068870_10019465 3300005840 Bacteria 3293
54 Ga0068870_10341686 3300005840 Bacteria 958
55 Ga0068863_100019338 3300005841 Bacteria 6514
56 Ga0068858_100006053 3300005842 Bacteria 11790
57 Ga0068860_100046303 3300005843 Bacteria 4147
58 Ga0068862_100001983 3300005844 Bacteria 18568
59 Ga0068862_100007770 3300005844 Bacteria 8868
60 Ga0070715_10088584 3300006163 Unclassified 1419
61 Ga0097621_100052350 3300006237 Bacteria 3326
62 Ga0068871_100237012 3300006358 Bacteria 1585
63 Ga0075428_100010511 3300006844 Bacteria 10285
64 Ga0075428_100020542 3300006844 Bacteria 7312
65 Ga0075428_100021962 3300006844 Bacteria 7067
66 Ga0075428_100128957 3300006844 Bacteria 2752
67 Ga0075428_100368622 3300006844 Bacteria 1540
68 Ga0075428_100473476 3300006844 Bacteria 1341
69 Ga0075430_100001101 3300006846 Bacteria 21485
70 Ga0075430_100036378 3300006846 Bacteria 4175
71 Ga0075431_100000101 3300006847 Bacteria 53683
72 Ga0075431_100014749 3300006847 Bacteria 7912
73 Ga0075431_100018092 3300006847 Bacteria 7167
74 Ga0075431_100031362 3300006847 Bacteria 5475
75 Ga0075431_100152550 3300006847 Bacteria 2379
76 Ga0075431_100263566 3300006847 Bacteria 1748
77 Ga0075429_100005444 3300006880 Bacteria 10966
78 Ga0075429_100005700 3300006880 Bacteria 10743
79 Ga0075429_100085725 3300006880 Bacteria 2745
80 Ga0075429_100205123 3300006880 Bacteria 1727
81 Ga0075429_100257583 3300006880 Bacteria 1528
82 Ga0068865_100009629 3300006881 Bacteria 5993
83 Ga0068865_100027245 3300006881 Bacteria 3773
84 Ga0075436_100150482 3300006914 Bacteria 1638
85 Ga0097620_100004100 3300006931 Bacteria 14861
86 Ga0075435_100146283 3300007076 Bacteria 1985
87 Ga0099795_10023320 3300007788 Bacteria 2053
88 Ga0105251_10099536 3300009011 Bacteria 1329
89 Ga0105240_10062569 3300009093 Bacteria 4633
90 Ga0111539_10015223 3300009094 Bacteria 9584
91 Ga0111539_10026865 3300009094 Bacteria 7032
92 Ga0111539_10261621 3300009094 Bacteria 2014
93 Ga0111539_10525912 3300009094 Bacteria 1378
94 Ga0111539_10817640 3300009094 Unclassified 1084
95 Ga0114129_10000264 3300009147 Bacteria 59324
96 Ga0105241_10055720 3300009174 Bacteria 3029
97 Ga0105248_10012994 3300009177 Bacteria 9176
98 Ga0105238_10016722 3300009551 Bacteria 7433
99 Ga0105249_10033958 3300009553 Bacteria 4620
100 Ga0105239_10099534 3300010375 Bacteria 3215
101 Ga0105246_10042777 3300011119 Bacteria 3069
102 Ga0157378_10022889 3300013297 Bacteria 5500
103 Ga0163162_10131536 3300013306 Bacteria 2611
104 Ga0157375_10022565 3300013308 Bacteria 5794
105 Ga0157375_10059120 3300013308 Bacteria 3796
106 Ga0163163_10009788 3300014325 Bacteria 8588
107 Ga0157380_10001671 3300014326 Bacteria 14638
108 Ga0157380_10041879 3300014326 Bacteria 3577
109 Ga0207642_10045772 3300025899 Bacteria 1945
110 Ga0207680_10113469 3300025903 Bacteria 1762
111 Ga0207645_10000555 3300025907 Bacteria 31018
112 Ga0207643_10021180 3300025908 Bacteria 3570
113 Ga0207643_10046577 3300025908 Bacteria 2452
114 Ga0207695_10117161 3300025913 Bacteria 2637
115 Ga0207652_10107585 3300025921 Unclassified 2470
116 Ga0207681_10022044 3300025923 Bacteria 4058
117 Ga0207681_10059538 3300025923 Bacteria 2618
118 Ga0207694_10117005 3300025924 Bacteria 2125
119 Ga0207659_10000537 3300025926 Bacteria 22637
120 Ga0207659_10146570 3300025926 Bacteria 1839
121 Ga0207706_10025244 3300025933 Bacteria 5327
122 Ga0207706_10094463 3300025933 Bacteria 2630
123 Ga0207670_10125799 3300025936 Bacteria 1870
124 Ga0207669_10054014 3300025937 Bacteria 2424
125 Ga0207669_10320519 3300025937 Bacteria 1186
126 Ga0207704_10028358 3300025938 Bacteria 3105
127 Ga0207704_10061244 3300025938 Bacteria 2333
128 Ga0207691_10000451 3300025940 Bacteria 40686
129 Ga0207691_10006502 3300025940 Bacteria 11284
130 Ga0207711_10017151 3300025941 Bacteria 6015
131 Ga0207689_10006657 3300025942 Bacteria 10191
132 Ga0207679_10006564 3300025945 Bacteria 7354
133 Ga0207667_10017787 3300025949 Bacteria 7993
134 Ga0207668_10274594 3300025972 Bacteria 1379
135 Ga0207703_10440050 3300026035 Bacteria 1216
136 Ga0207678_10449955 3300026067 Unclassified 1119
137 Ga0207708_10394930 3300026075 Bacteria 1143
138 Ga0207702_10092106 3300026078 Bacteria 2656
139 Ga0207641_10067520 3300026088 Bacteria 3063
140 Ga0207648_10001019 3300026089 Bacteria 31539
141 Ga0207648_10023133 3300026089 Bacteria 5573
142 Ga0207648_10263753 3300026089 Unclassified 1537
143 Ga0207676_10013561 3300026095 Bacteria 5850
144 Ga0207674_10228422 3300026116 Bacteria 1809
145 Ga0207675_100000567 3300026118 Bacteria 36188
146 Ga0207675_100002434 3300026118 Bacteria 18439
147 Ga0207675_100010778 3300026118 Bacteria 8565
148 Ga0207683_10140239 3300026121 Bacteria 2178
149 Ga0209971_1000756 3300027682 Bacteria 8347
150 Ga0209998_10000456 3300027717 Bacteria 11351
151 Ga0209974_10002339 3300027876 Bacteria 6877
152 Ga0207428_10006308 3300027907 Bacteria 10962
153 Ga0207428_10026811 3300027907 Bacteria 4802
154 Ga0265354_1005414 3300028016 Bacteria 1296
155 Ga0265356_1002946 3300028017 Bacteria 2189
156 Ga0268266_10025208 3300028379 Bacteria 5062
157 Ga0268265_10007614 3300028380 Bacteria 7305
158 Ga0268265_10051499 3300028380 Bacteria 3108
159 Ga0268264_10038801 3300028381 Bacteria 3932
160 Ga0265770_1000297 3300030878 Bacteria 6735
161 Ga0265765_1006157 3300030879 Bacteria 1271
162 Ga0265760_10002000 3300031090 Bacteria 5994
163 Ga0265340_10089750 3300031247 Bacteria 1438
164 Ga0265339_10054179 3300031249 Bacteria 2180
165 Ga0307509_10000803 3300031507 Bacteria 53898
166 Ga0307408_100039291 3300031548 Bacteria 3344
167 Ga0307408_100096924 3300031548 Bacteria 2239
168 Ga0316575_10005401 3300031665 Bacteria 4558
169 Ga0316576_10003894 3300031727 Bacteria 8843
170 Ga0316576_10035435 3300031727 Bacteria 3561
171 Ga0307516_10002023 3300031730 Bacteria 27657
172 Ga0307405_10688174 3300031731 Bacteria 845
173 Ga0316577_10002932 3300031733 Bacteria 8541
174 Ga0307413_10123931 3300031824 Bacteria 1756
175 Ga0307413_10308130 3300031824 Unclassified 1204
176 Ga0307407_10197698 3300031903 Bacteria 1345
177 Ga0307407_10326557 3300031903 Bacteria 1079
178 Ga0307412_10161067 3300031911 Unclassified 1667
179 Ga0307409_100088098 3300031995 Bacteria 2533
180 Ga0307416_100334170 3300032002 Bacteria 1524
181 Ga0307414_10308140 3300032004 Bacteria 1343
182 Ga0307411_10250515 3300032005 Archaea 1392
183 Ga0316585_10007030 3300032137 Bacteria 3231
184 Ga0316580_10002929 3300032139 Bacteria 4784
185 Ga0373930_0016043 3300034816 Bacteria 1413
186 Ga0373936_0009682 3300035113 Bacteria 3632
187 Ga0373941_0068541 3300035115 Unclassified 1172
188 Ga0316574_0003595 3300035398 Bacteria 8022
189 Ga0316574_0022638 3300035398 Bacteria 3744
190 Ga0316574_0035404 3300035398 Bacteria 3051
191 Ga0373924_0298178 3300035410 Unclassified 716
192 Ga0373931_0093711 3300035691 Bacteria 1678
193 Ga0373937_0443343 3300036401 Unclassified 1233
194 Ga0316582_0071214 3300036647 Bacteria 2251
195 Ga0316584_0048696 3300036712 Bacteria 3166
196 Ga0395900_0222700 3300037418 Bacteria 1901
197 Ga0395898_0021525 3300037466 Bacteria 6539
198 Ga0400487_43471 3300039110 Bacteria 1571
199 Ga0439431_0040708 3300041997 Bacteria 1183
200 Ga0439449_0072749 3300042007 Bacteria 1267
201 Ga0450894_017235 3300042131 Unclassified 961
202 Ga0451577_0071601 3300042876 Bacteria 3091
203 Ga0451577_0118575 3300042876 Bacteria 2370
204 Ga0466966_0138381 3300044684 Unclassified 1489
205 Ga0453684_0048251 3300044712 Bacteria 5634
206 Ga0466959_0234250 3300045049 Bacteria 1270
207 Ga0451576_0141502 3300045051 Bacteria 2508
208 Ga0451576_0247696 3300045051 Bacteria 1862
209 Ga0495638_0000843 3300046460 Bacteria 32065
210 Ga0495668_0123619 3300046616 Unclassified 1416
211 Ga0495625_0069569 3300046660 Bacteria 2473
212 Ga0495672_0069542 3300047320 Bacteria 1998
213 Ga0496100_0160606 3300048903 Unclassified 1611
214 Ga0496104_0243527 3300048907 Bacteria 1710
215 Ga0496105_0009349 3300048908 Bacteria 7661
216 Ga0496115_0028920 3300048918 Bacteria 4347
217 Ga0496121_0124545 3300048924 Bacteria 1940
218 Ga0496124_0089983 3300048927 Bacteria 2505
219 Ga0501298_034167 3300049521 Unclassified 1010
220 Ga0501036_0143118 3300049572 Unclassified 2017
221 Ga0501040_0090103 3300049576 Bacteria 2131
222 Ga0501041_0029270 3300049577 Bacteria 3322
223 Ga0501042_0032378 3300049578 Bacteria 3702
224 Ga0501046_0048208 3300049580 Bacteria 3375
225 Ga0501068_0084872 3300049584 Bacteria 1948
226 Ga0501071_0015160 3300049587 Bacteria 5287
227 Ga0501071_0057628 3300049587 Bacteria 2808
228 Ga0501072_0032094 3300049588 Bacteria 4112
229 Ga0501072_0157703 3300049588 Bacteria 1810
230 Ga0501074_0136805 3300049590 Bacteria 1752
231 Ga0501074_0172206 3300049590 Unclassified 1545
232 Ga0501075_0060108 3300049591 Bacteria 2863
233 Ga0501076_0120727 3300049592 Bacteria 2122
234 Ga0501077_0144169 3300049593 Bacteria 1511
235 Ga0501233_074160 3300049668 Bacteria 867
236 Ga0501249_031620 3300049679 Unclassified 1181
237 Ga0501079_0096829 3300049741 Bacteria 2287
238 Ga0501079_0176957 3300049741 Bacteria 1664
239 Ga0501081_0023599 3300049743 Bacteria 4123
240 Ga0501035_0517556 3300049822 Bacteria 980
241 Ga0501045_0032255 3300049824 Bacteria 3796
242 Ga0501045_0174654 3300049824 Bacteria 1600
243 nmdc:mga05p37_12969_c1 3300050507 Bacteria 9972
244 nmdc:mga05p37_5259_c1 3300050507 Bacteria 15191
245 nmdc:mga09592_129249_c1 3300050508 Bacteria 2173
246 nmdc:mga09592_145350_c1 3300050508 Bacteria 2045
247 nmdc:mga09592_165519_c1 3300050508 Bacteria 1911
248 nmdc:mga09592_37021_c1 3300050508 Bacteria 4090
249 nmdc:mga09592_92287_c1 3300050508 Bacteria 2588
250 nmdc:mga0qj67_12711_c1 3300050509 Bacteria 6350
251 nmdc:mga0qj67_135294_c1 3300050509 Bacteria 1997
252 nmdc:mga0qj67_227448_c1 3300050509 Bacteria 1514
253 nmdc:mga0qj67_266925_c1 3300050509 Bacteria 1388
254 nmdc:mga0qj67_372218_c1 3300050509 Unclassified 1154
255 nmdc:mga0qj67_502926_c1 3300050509 Bacteria 974
256 nmdc:mga06r32_419400_c1 3300050510 Bacteria 1320
257 nmdc:mga06r32_48202_c1 3300050510 Bacteria 4072
258 nmdc:mga06r32_57239_c1 3300050510 Bacteria 3745
259 nmdc:mga06r32_655_c1 3300050510 Bacteria 29828
260 nmdc:mga06r32_8_c1 3300050510 Bacteria 120971
261 nmdc:mga08y16_11018_c1 3300050511 Bacteria 9494
262 nmdc:mga08y16_183060_c1 3300050511 Bacteria 2175
263 nmdc:mga08y16_311224_c1 3300050511 Bacteria 1622
264 nmdc:mga08y16_413999_c1 3300050511 Bacteria 1378
265 nmdc:mga08y16_602218_c1 3300050511 Bacteria 1108
266 nmdc:mga0rr50_359982_c1 3300050513 Bacteria 1224
267 nmdc:mga08x19_129685_c1 3300050514 Bacteria 1695
268 Ga0500583_0045234 3300053092 Bacteria 2020
269 Ga0500617_078497 3300053124 Bacteria 1434
270 Ga0500622_0027628 3300053156 Bacteria 2991
271 Ga0500622_0028832 3300053156 Bacteria 2921
272 Ga0501084_0158900 3300054114 Bacteria 1907
273 Ga0501082_0059296 3300060353 Bacteria 3298
274 Ga0501082_0230355 3300060353 Bacteria 1612
275 Ga0530510_0103366 3300061734 Bacteria 2083
276 Ga0070662_100060627
277 SwRhRL2b_contig_2061763
278 rootH1_10247485
279 Ga0065704_10002171
280 Ga0065712_10072594
281 Ga0065715_10118830
282 Ga0065707_10084939
283 Ga0070658_10202020
284 Ga0070676_10015289
285 Ga0070676_10111091
286 Ga0070690_100002047
287 Ga0068869_100001945
288 Ga0070666_10186446
289 Ga0070680_100122013
290 Ga0070689_100002696
291 Ga0070661_100524210
292 Ga0070692_10027227
293 Ga0070668_100001171
294 Ga0070668_100364739
295 Ga0070669_100042226
296 Ga0070675_100001181
297 Ga0070675_100156404
298 Ga0070674_100010532
299 Ga0070673_100012559
300 Ga0070673_100251286
301 Ga0070688_100025863
302 Ga0070705_100045162
303 Ga0070694_100301542
304 Ga0070678_100090966
305 Ga0070662_100003755
306 Ga0070681_10069429
307 Ga0068867_100132065
308 Ga0070685_10011797
309 Ga0070679_100038007
310 Ga0070684_100002503
311 Ga0070672_100036500
312 Ga0070672_100133600
313 Ga0070686_100027304
314 Ga0070695_100403956
315 Ga0070696_100008119
316 Ga0070665_100015484
317 Ga0068855_100115951
318 Ga0068855_100564158
319 Ga0068857_100012314
320 Ga0068857_100213596
321 Ga0070702_100002349
322 Ga0068859_100004100
323 Ga0068866_10045035
324 Ga0068866_10104651
325 Ga0068861_100016915
326 Ga0068861_100048246
327 Ga0068861_100063903
328 Ga0068870_10019465
329 Ga0068870_10341686
330 Ga0068863_100019338
331 Ga0068858_100006053
332 Ga0068860_100046303
333 Ga0068862_100001983
334 Ga0068862_100007770
335 Ga0070715_10088584
336 Ga0097621_100052350
337 Ga0068871_100237012
338 Ga0075428_100010511
339 Ga0075428_100020542
340 Ga0075428_100021962
341 Ga0075428_100128957
342 Ga0075428_100368622
343 Ga0075428_100473476
344 Ga0075430_100001101
345 Ga0075430_100036378
346 Ga0075431_100000101
347 Ga0075431_100014749
348 Ga0075431_100018092
349 Ga0075431_100031362
350 Ga0075431_100152550
351 Ga0075431_100263566
352 Ga0075429_100005444
353 Ga0075429_100005700
354 Ga0075429_100085725
355 Ga0075429_100205123
356 Ga0075429_100257583
357 Ga0068865_100009629
358 Ga0068865_100027245
359 Ga0075436_100150482
360 Ga0097620_100004100
361 Ga0075435_100146283
362 Ga0099795_10023320
363 Ga0105251_10099536
364 Ga0105240_10062569
365 Ga0111539_10015223
366 Ga0111539_10026865
367 Ga0111539_10261621
368 Ga0111539_10525912
369 Ga0111539_10817640
370 Ga0114129_10000264
371 Ga0105241_10055720
372 Ga0105248_10012994
373 Ga0105238_10016722
374 Ga0105249_10033958
375 Ga0105239_10099534
376 Ga0105246_10042777
377 Ga0157378_10022889
378 Ga0163162_10131536
379 Ga0157375_10022565
380 Ga0157375_10059120
381 Ga0163163_10009788
382 Ga0157380_10001671
383 Ga0157380_10041879
384 Ga0207642_10045772
385 Ga0207680_10113469
386 Ga0207645_10000555
387 Ga0207643_10021180
388 Ga0207643_10046577
389 Ga0207695_10117161
390 Ga0207652_10107585
391 Ga0207681_10022044
392 Ga0207681_10059538
393 Ga0207694_10117005
394 Ga0207659_10000537
395 Ga0207659_10146570
396 Ga0207706_10025244
397 Ga0207706_10094463
398 Ga0207670_10125799
399 Ga0207669_10054014
400 Ga0207669_10320519
401 Ga0207704_10028358
402 Ga0207704_10061244
403 Ga0207691_10000451
404 Ga0207691_10006502
405 Ga0207711_10017151
406 Ga0207689_10006657
407 Ga0207679_10006564
408 Ga0207667_10017787
409 Ga0207668_10274594
410 Ga0207703_10440050
411 Ga0207678_10449955
412 Ga0207708_10394930
413 Ga0207702_10092106
414 Ga0207641_10067520
415 Ga0207648_10001019
416 Ga0207648_10023133
417 Ga0207648_10263753
418 Ga0207676_10013561
419 Ga0207674_10228422
420 Ga0207675_100000567
421 Ga0207675_100002434
422 Ga0207675_100010778
423 Ga0207683_10140239
424 Ga0209971_1000756
425 Ga0209998_10000456
426 Ga0209974_10002339
427 Ga0207428_10006308
428 Ga0207428_10026811
429 Ga0265354_1005414
430 Ga0265356_1002946
431 Ga0268266_10025208
432 Ga0268265_10007614
433 Ga0268265_10051499
434 Ga0268264_10038801
435 Ga0265770_1000297
436 Ga0265765_1006157
437 Ga0265760_10002000
438 Ga0265340_10089750
439 Ga0265339_10054179
440 Ga0307509_10000803
441 Ga0307408_100039291
442 Ga0307408_100096924
443 Ga0316575_10005401
444 Ga0316576_10003894
445 Ga0316576_10035435
446 Ga0307516_10002023
447 Ga0307405_10688174
448 Ga0316577_10002932
449 Ga0307413_10123931
450 Ga0307413_10308130
451 Ga0307407_10197698
452 Ga0307407_10326557
453 Ga0307412_10161067
454 Ga0307409_100088098
455 Ga0307416_100334170
456 Ga0307414_10308140
457 Ga0307411_10250515
458 Ga0316585_10007030
459 Ga0316580_10002929
460 Ga0373930_0016043
461 Ga0373936_0009682
462 Ga0373941_0068541
463 Ga0316574_0003595
464 Ga0316574_0022638
465 Ga0316574_0035404
466 Ga0373924_0298178
467 Ga0373931_0093711
468 Ga0373937_0443343
469 Ga0316582_0071214
470 Ga0316584_0048696
471 Ga0395900_0222700
472 Ga0395898_0021525
473 Ga0400487_43471
474 Ga0439431_0040708
475 Ga0439449_0072749
476 Ga0450894_017235
477 Ga0451577_0071601
478 Ga0451577_0118575
479 Ga0466966_0138381
480 Ga0453684_0048251
481 Ga0466959_0234250
482 Ga0451576_0141502
483 Ga0451576_0247696
484 Ga0495638_0000843
485 Ga0495668_0123619
486 Ga0495625_0069569
487 Ga0495672_0069542
488 Ga0496100_0160606
489 Ga0496104_0243527
490 Ga0496105_0009349
491 Ga0496115_0028920
492 Ga0496121_0124545
493 Ga0496124_0089983
494 Ga0501298_034167
495 Ga0501036_0143118
496 Ga0501040_0090103
497 Ga0501041_0029270
498 Ga0501042_0032378
499 Ga0501046_0048208
500 Ga0501068_0084872
501 Ga0501071_0015160
502 Ga0501071_0057628
503 Ga0501072_0032094
504 Ga0501072_0157703
505 Ga0501074_0136805
506 Ga0501074_0172206
507 Ga0501075_0060108
508 Ga0501076_0120727
509 Ga0501077_0144169
510 Ga0501233_074160
511 Ga0501249_031620
512 Ga0501079_0096829
513 Ga0501079_0176957
514 Ga0501081_0023599
515 Ga0501035_0517556
516 Ga0501045_0032255
517 Ga0501045_0174654
518 nmdc:mga05p37_12969_c1
519 nmdc:mga05p37_5259_c1
520 nmdc:mga09592_129249_c1
521 nmdc:mga09592_145350_c1
522 nmdc:mga09592_165519_c1
523 nmdc:mga09592_37021_c1
524 nmdc:mga09592_92287_c1
525 nmdc:mga0qj67_12711_c1
526 nmdc:mga0qj67_135294_c1
527 nmdc:mga0qj67_227448_c1
528 nmdc:mga0qj67_266925_c1
529 nmdc:mga0qj67_372218_c1
530 nmdc:mga0qj67_502926_c1
531 nmdc:mga06r32_419400_c1
532 nmdc:mga06r32_48202_c1
533 nmdc:mga06r32_57239_c1
534 nmdc:mga06r32_655_c1
535 nmdc:mga06r32_8_c1
536 nmdc:mga08y16_11018_c1
537 nmdc:mga08y16_183060_c1
538 nmdc:mga08y16_311224_c1
539 nmdc:mga08y16_413999_c1
540 nmdc:mga08y16_602218_c1
541 nmdc:mga0rr50_359982_c1
542 nmdc:mga08x19_129685_c1
543 Ga0500583_0045234
544 Ga0500617_078497
545 Ga0500622_0027628
546 Ga0500622_0028832
547 Ga0501084_0158900
548 Ga0501082_0059296
549 Ga0501082_0230355
550 Ga0530510_0103366

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13525

YfiO

Outer membrane lipoprotein

59

265

0.97

PF13512

TPR_18

Tetratricopeptide repeat

54

197

0.96

PF13432

TPR_16

Tetratricopeptide repeat

103

152

0.94

PF13432

TPR_16

Tetratricopeptide repeat

67

133

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q5m-assembly1.cif.gz_A crystal structure of escherichia coli bamd 0.939 35 254
2yhc-assembly1.cif.gz_A structure of bamd from e. coli 0.9389 43 254
3q5m-assembly1.cif.gz_A crystal structure of escherichia coli bamd 0.9217 35 254
7tt1-assembly1.cif.gz_D bamabcde bound to substrate espp class 4 0.9185 43 254
5ljo-assembly1.cif.gz_D e. coli bam complex (bamabcde) by cryoem 0.9135 37 254
ID Description Score Start End Superfamily
2yhcA00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9389 43 254 1.25.40.10
2xevB00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9295 46 182 1.25.40.10
af_Q4E265_394_489_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9138 38 108 1.25.40.10
af_A4I8A6_427_522_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9081 38 108 1.25.40.10
5ekqD00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9055 37 254 1.25.40.10
ID Description Score Start End GO Terms
AF-W9V0D6-F1-model_v4 Outer membrane protein assembly factor BamD 0.9634 59 252 GO:0043165
GO:0051205
GO:1990063
AF-A0A379W591-F1-model_v4 Outer membrane protein assembly factor BamD 0.9619 83 252 GO:0009279
GO:0043165
GO:0051205
AF-E0XZC0-F1-model_v4 Outer membrane protein assembly factor BamD 0.9596 47 256 GO:0043165
GO:0051205
GO:1990063
AF-W7PZP8-F1-model_v4 Competence protein ComL 0.9528 96 252 GO:0009279
AF-J5Y3F4-F1-model_v4 Outer membrane protein assembly factor BamD 0.9523 38 252 GO:0043165
GO:0051205
GO:1990063

Map