F380019
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 274 | 122 | 548 | 253 |
Family's Representative Sequence
| Representative Sequence | 3300049584|Ga0501068_0318297|Ga0501068_0318297_57_959 |
| Length | 300 |
| Sequence | VKILTWNVNGIRKRQAELGALLAAEQPDVACLQEIKAGPEKIPELLLSVGGYWCYWHGQSGYSGVALLVNQTLCVDRPLFTHPAFDHEQRIVAAEVGGLTVASVYVPNGGKDFEAKLRFLEALAAWAAEVHGRGGALVICGDLNVAREARDVHPKERKPNQIGTRPEERALLERVLEAGLLDVGRALDPDNEFLFTWWAPWRNLRQRNIGWRIDYVLASRRLAAGAERAASLRDFGTSDHAPVVVSFGTPFRDAGVGLQPGAQPAGHEAPRLRPSASGAPGGWTGSQADRETRLKPATTG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 2 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 3 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 4 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 5 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 6 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 10 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 13 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 14 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 15 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 16 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 17 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 18 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 19 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 20 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 21 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 22 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 23 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 24 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300027360 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300027471 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300027682 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 50 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 53 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 54 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 55 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 56 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 57 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 58 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 59 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 60 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 61 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 62 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 63 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 64 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 65 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 66 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 67 | 3300041443 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG | Metagenome | Rhizoplane |
| 68 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 69 | 3300042461 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 | Metagenome | Rhizosphere |
| 70 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 71 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 72 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 73 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 78 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 79 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 80 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 81 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 82 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 83 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 84 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 85 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 86 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 87 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 88 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 89 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 90 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 91 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 92 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 93 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 94 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 95 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 96 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 97 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 98 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 99 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 100 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 101 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 102 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 103 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 104 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 105 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 106 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 107 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 108 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 110 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 113 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 114 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 115 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 117 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300059421 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 119 | 3300059424 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 120 | 3300059426 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 121 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 1.46 |
| Rhizosphere | 98.54 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 12.77 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0501068_0318297 | 3300049584 | Bacteria | 997 |
| 2 | Ga0065712_10018458 | 3300005290 | Unclassified | 1511 |
| 3 | Ga0065707_10087791 | 3300005295 | Bacteria | 4889 |
| 4 | Ga0068868_100004420 | 3300005338 | Bacteria | 9857 |
| 5 | Ga0070689_100289299 | 3300005340 | Bacteria | 1361 |
| 6 | Ga0070669_100124534 | 3300005353 | Unclassified | 1971 |
| 7 | Ga0070675_100303676 | 3300005354 | Bacteria | 1407 |
| 8 | Ga0070675_100419987 | 3300005354 | Unclassified | 1196 |
| 9 | Ga0070673_100124175 | 3300005364 | Unclassified | 2158 |
| 10 | Ga0070709_10000108 | 3300005434 | Bacteria | 57430 |
| 11 | Ga0070686_100030573 | 3300005544 | Bacteria | 3286 |
| 12 | Ga0070696_100319155 | 3300005546 | Unclassified | 1195 |
| 13 | Ga0068864_100045431 | 3300005618 | Bacteria | 3768 |
| 14 | Ga0068863_100193690 | 3300005841 | Bacteria | 1954 |
| 15 | Ga0068858_100008172 | 3300005842 | Bacteria | 10062 |
| 16 | Ga0068860_100006965 | 3300005843 | Bacteria | 11332 |
| 17 | Ga0068860_100571212 | 3300005843 | Unclassified | 1134 |
| 18 | Ga0068862_100000797 | 3300005844 | Bacteria | 31228 |
| 19 | Ga0068862_100152121 | 3300005844 | Bacteria | 2060 |
| 20 | Ga0097621_100049203 | 3300006237 | Bacteria | 3424 |
| 21 | Ga0075428_100198968 | 3300006844 | Bacteria | 2167 |
| 22 | Ga0075430_100408538 | 3300006846 | Unclassified | 1121 |
| 23 | Ga0075431_100437203 | 3300006847 | Unclassified | 1306 |
| 24 | Ga0075433_10338531 | 3300006852 | Unclassified | 1330 |
| 25 | Ga0075434_100084043 | 3300006871 | Bacteria | 3182 |
| 26 | Ga0075434_100396416 | 3300006871 | Unclassified | 1401 |
| 27 | Ga0075429_100046073 | 3300006880 | Bacteria | 3794 |
| 28 | Ga0097620_100025252 | 3300006931 | Bacteria | 5962 |
| 29 | Ga0111539_10002927 | 3300009094 | Bacteria | 22635 |
| 30 | Ga0111539_10035463 | 3300009094 | Bacteria | 6039 |
| 31 | Ga0111539_10097204 | 3300009094 | Unclassified | 3459 |
| 32 | Ga0111539_10243898 | 3300009094 | Bacteria | 2092 |
| 33 | Ga0111539_10745230 | 3300009094 | Unclassified | 1140 |
| 34 | Ga0114129_10001036 | 3300009147 | Bacteria | 36363 |
| 35 | Ga0105242_10164275 | 3300009176 | Bacteria | 1946 |
| 36 | Ga0105242_10200528 | 3300009176 | Bacteria | 1772 |
| 37 | Ga0105248_10201930 | 3300009177 | Bacteria | 2240 |
| 38 | Ga0105248_10289057 | 3300009177 | Bacteria | 1846 |
| 39 | Ga0105249_10049075 | 3300009553 | Bacteria | 3849 |
| 40 | Ga0105249_10111528 | 3300009553 | Bacteria | 2586 |
| 41 | Ga0105249_10422012 | 3300009553 | Bacteria | 1368 |
| 42 | Ga0105249_10529829 | 3300009553 | Unclassified | 1226 |
| 43 | Ga0163162_10149573 | 3300013306 | Bacteria | 2452 |
| 44 | Ga0163163_10000036 | 3300014325 | Bacteria | 156659 |
| 45 | Ga0157380_10175653 | 3300014326 | Bacteria | 1876 |
| 46 | Ga0157380_10458477 | 3300014326 | Unclassified | 1226 |
| 47 | Ga0157380_10717729 | 3300014326 | Bacteria | 1007 |
| 48 | Ga0157376_10399378 | 3300014969 | Bacteria | 1329 |
| 49 | Ga0157376_10403869 | 3300014969 | Unclassified | 1322 |
| 50 | Ga0207699_10000244 | 3300025906 | Bacteria | 30537 |
| 51 | Ga0207681_10168101 | 3300025923 | Unclassified | 1660 |
| 52 | Ga0207650_10220987 | 3300025925 | Unclassified | 1525 |
| 53 | Ga0207659_10079926 | 3300025926 | Bacteria | 2414 |
| 54 | Ga0207686_10322635 | 3300025934 | Unclassified | 1154 |
| 55 | Ga0207711_10121845 | 3300025941 | Bacteria | 2329 |
| 56 | Ga0207711_10405777 | 3300025941 | Bacteria | 1266 |
| 57 | Ga0207712_10293881 | 3300025961 | Unclassified | 1331 |
| 58 | Ga0207703_10033848 | 3300026035 | Bacteria | 4052 |
| 59 | Ga0207641_10157817 | 3300026088 | Bacteria | 2060 |
| 60 | Ga0207676_10208963 | 3300026095 | Unclassified | 1730 |
| 61 | Ga0207676_10828342 | 3300026095 | Unclassified | 904 |
| 62 | Ga0207675_100088153 | 3300026118 | Unclassified | 2914 |
| 63 | Ga0209969_1000430 | 3300027360 | Bacteria | 5605 |
| 64 | Ga0209995_1000255 | 3300027471 | Bacteria | 8527 |
| 65 | Ga0209971_1004033 | 3300027682 | Unclassified | 3472 |
| 66 | Ga0209974_10013496 | 3300027876 | Unclassified | 2721 |
| 67 | Ga0209974_10035311 | 3300027876 | Bacteria | 1660 |
| 68 | Ga0207428_10002096 | 3300027907 | Bacteria | 20101 |
| 69 | Ga0207428_10176063 | 3300027907 | Bacteria | 1618 |
| 70 | Ga0268265_10000708 | 3300028380 | Bacteria | 32801 |
| 71 | Ga0268265_10102443 | 3300028380 | Bacteria | 2316 |
| 72 | Ga0268264_10365684 | 3300028381 | Unclassified | 1377 |
| 73 | Ga0307408_100009359 | 3300031548 | Bacteria | 6457 |
| 74 | Ga0316576_10465262 | 3300031727 | Bacteria | 933 |
| 75 | Ga0307405_10071645 | 3300031731 | Bacteria | 2230 |
| 76 | Ga0307413_10028420 | 3300031824 | Bacteria | 3114 |
| 77 | Ga0307410_10038654 | 3300031852 | Bacteria | 3127 |
| 78 | Ga0307406_10011274 | 3300031901 | Bacteria | 5069 |
| 79 | Ga0307407_10003888 | 3300031903 | Bacteria | 6228 |
| 80 | Ga0307412_10149080 | 3300031911 | Bacteria | 1723 |
| 81 | Ga0307409_100006284 | 3300031995 | Bacteria | 6961 |
| 82 | Ga0307416_100000945 | 3300032002 | Bacteria | 15381 |
| 83 | Ga0307414_10036721 | 3300032004 | Bacteria | 3274 |
| 84 | Ga0307411_10033964 | 3300032005 | Bacteria | 3169 |
| 85 | Ga0307415_100016283 | 3300032126 | Bacteria | 4428 |
| 86 | Ga0373957_0002748 | 3300035120 | Bacteria | 5061 |
| 87 | Ga0373937_0000120 | 3300036401 | Bacteria | 74752 |
| 88 | Ga0451789_1210553 | 3300041443 | Unclassified | 781 |
| 89 | Ga0439446_0010109 | 3300042156 | Bacteria | 2537 |
| 90 | Ga0439460_0013040 | 3300042461 | Bacteria | 2168 |
| 91 | Ga0439460_0029204 | 3300042461 | Bacteria | 1560 |
| 92 | Ga0453683_0000720 | 3300044673 | Bacteria | 33945 |
| 93 | Ga0453684_0027706 | 3300044712 | Bacteria | 8111 |
| 94 | Ga0453684_0352055 | 3300044712 | Bacteria | 1660 |
| 95 | Ga0451576_0011381 | 3300045051 | Bacteria | 10118 |
| 96 | Ga0451576_0486072 | 3300045051 | Bacteria | 1297 |
| 97 | Ga0495592_0193093 | 3300046454 | Bacteria | 1379 |
| 98 | Ga0495630_0253386 | 3300046517 | Bacteria | 1345 |
| 99 | Ga0495587_0080331 | 3300046536 | Unclassified | 1890 |
| 100 | Ga0495684_0082938 | 3300047471 | Unclassified | 2432 |
| 101 | Ga0496105_0404604 | 3300048908 | Bacteria | 1083 |
| 102 | Ga0496110_0021401 | 3300048913 | Bacteria | 5475 |
| 103 | Ga0496114_0071083 | 3300048917 | Bacteria | 2924 |
| 104 | Ga0501031_0016027 | 3300049568 | Bacteria | 4866 |
| 105 | Ga0501031_0047800 | 3300049568 | Bacteria | 2789 |
| 106 | Ga0501031_0184816 | 3300049568 | Unclassified | 1361 |
| 107 | Ga0501031_0264491 | 3300049568 | Bacteria | 1117 |
| 108 | Ga0501032_0025665 | 3300049569 | Bacteria | 4061 |
| 109 | Ga0501032_0093792 | 3300049569 | Bacteria | 1990 |
| 110 | Ga0501033_0041590 | 3300049570 | Bacteria | 3428 |
| 111 | Ga0501033_0063560 | 3300049570 | Bacteria | 2716 |
| 112 | Ga0501033_0270912 | 3300049570 | Bacteria | 1200 |
| 113 | Ga0501033_0324819 | 3300049570 | Bacteria | 1081 |
| 114 | Ga0501034_0002697 | 3300049571 | Bacteria | 20903 |
| 115 | Ga0501034_0007788 | 3300049571 | Bacteria | 11396 |
| 116 | Ga0501034_0026566 | 3300049571 | Bacteria | 5895 |
| 117 | Ga0501034_0030578 | 3300049571 | Bacteria | 5473 |
| 118 | Ga0501034_0054278 | 3300049571 | Bacteria | 4034 |
| 119 | Ga0501034_0058041 | 3300049571 | Bacteria | 3890 |
| 120 | Ga0501034_0229941 | 3300049571 | Bacteria | 1804 |
| 121 | Ga0501034_0496385 | 3300049571 | Unclassified | 1134 |
| 122 | Ga0501034_0577489 | 3300049571 | Bacteria | 1031 |
| 123 | Ga0501036_0018539 | 3300049572 | Bacteria | 5833 |
| 124 | Ga0501036_0021258 | 3300049572 | Bacteria | 5452 |
| 125 | Ga0501036_0022732 | 3300049572 | Bacteria | 5279 |
| 126 | Ga0501036_0177943 | 3300049572 | Bacteria | 1791 |
| 127 | Ga0501036_0238240 | 3300049572 | Bacteria | 1526 |
| 128 | Ga0501037_0009289 | 3300049573 | Bacteria | 7211 |
| 129 | Ga0501037_0012398 | 3300049573 | Bacteria | 6276 |
| 130 | Ga0501037_0070327 | 3300049573 | Bacteria | 2546 |
| 131 | Ga0501038_0002457 | 3300049574 | Bacteria | 17257 |
| 132 | Ga0501038_0009670 | 3300049574 | Bacteria | 8843 |
| 133 | Ga0501038_0031138 | 3300049574 | Bacteria | 4716 |
| 134 | Ga0501038_0085058 | 3300049574 | Bacteria | 2660 |
| 135 | Ga0501038_0135237 | 3300049574 | Bacteria | 2020 |
| 136 | Ga0501038_0198510 | 3300049574 | Bacteria | 1611 |
| 137 | Ga0501039_0024914 | 3300049575 | Bacteria | 4596 |
| 138 | Ga0501039_0074796 | 3300049575 | Bacteria | 2633 |
| 139 | Ga0501039_0161989 | 3300049575 | Bacteria | 1758 |
| 140 | Ga0501039_0301161 | 3300049575 | Bacteria | 1260 |
| 141 | Ga0501040_0007987 | 3300049576 | Bacteria | 6869 |
| 142 | Ga0501040_0134928 | 3300049576 | Bacteria | 1737 |
| 143 | Ga0501040_0226460 | 3300049576 | Bacteria | 1331 |
| 144 | Ga0501041_0123442 | 3300049577 | Bacteria | 1611 |
| 145 | Ga0501041_0168177 | 3300049577 | Bacteria | 1371 |
| 146 | Ga0501042_0080807 | 3300049578 | Bacteria | 2329 |
| 147 | Ga0501042_0155868 | 3300049578 | Bacteria | 1647 |
| 148 | Ga0501042_0254571 | 3300049578 | Bacteria | 1267 |
| 149 | Ga0501043_0001782 | 3300049579 | Bacteria | 18506 |
| 150 | Ga0501043_0007251 | 3300049579 | Bacteria | 8803 |
| 151 | Ga0501043_0036197 | 3300049579 | Bacteria | 3882 |
| 152 | Ga0501043_0037977 | 3300049579 | Bacteria | 3787 |
| 153 | Ga0501043_0050724 | 3300049579 | Bacteria | 3261 |
| 154 | Ga0501043_0080610 | 3300049579 | Bacteria | 2557 |
| 155 | Ga0501043_0089711 | 3300049579 | Bacteria | 2416 |
| 156 | Ga0501046_0002993 | 3300049580 | Bacteria | 15619 |
| 157 | Ga0501046_0029961 | 3300049580 | Bacteria | 4421 |
| 158 | Ga0501046_0038021 | 3300049580 | Bacteria | 3864 |
| 159 | Ga0501046_0094049 | 3300049580 | Bacteria | 2304 |
| 160 | Ga0501046_0094345 | 3300049580 | Bacteria | 2300 |
| 161 | Ga0501046_0095081 | 3300049580 | Bacteria | 2289 |
| 162 | Ga0501046_0111409 | 3300049580 | Bacteria | 2090 |
| 163 | Ga0501047_0000865 | 3300049581 | Bacteria | 30926 |
| 164 | Ga0501047_0007726 | 3300049581 | Bacteria | 10125 |
| 165 | Ga0501047_0022751 | 3300049581 | Bacteria | 6018 |
| 166 | Ga0501047_0026544 | 3300049581 | Bacteria | 5573 |
| 167 | Ga0501047_0027070 | 3300049581 | Bacteria | 5522 |
| 168 | Ga0501047_0143368 | 3300049581 | Bacteria | 2266 |
| 169 | Ga0501047_0165028 | 3300049581 | Bacteria | 2085 |
| 170 | Ga0501047_0238779 | 3300049581 | Bacteria | 1668 |
| 171 | Ga0501048_0009867 | 3300049582 | Bacteria | 7160 |
| 172 | Ga0501048_0015004 | 3300049582 | Bacteria | 5727 |
| 173 | Ga0501048_0016815 | 3300049582 | Bacteria | 5391 |
| 174 | Ga0501048_0032345 | 3300049582 | Bacteria | 3780 |
| 175 | Ga0501048_0063551 | 3300049582 | Bacteria | 2610 |
| 176 | Ga0501048_0114025 | 3300049582 | Bacteria | 1909 |
| 177 | Ga0501067_0004134 | 3300049583 | Bacteria | 8007 |
| 178 | Ga0501067_0005715 | 3300049583 | Bacteria | 6903 |
| 179 | Ga0501067_0015537 | 3300049583 | Bacteria | 4214 |
| 180 | Ga0501067_0095523 | 3300049583 | Bacteria | 1650 |
| 181 | Ga0501068_0035384 | 3300049584 | Bacteria | 2980 |
| 182 | Ga0501068_0054452 | 3300049584 | Bacteria | 2423 |
| 183 | Ga0501068_0119236 | 3300049584 | Bacteria | 1644 |
| 184 | Ga0501068_0448283 | 3300049584 | Bacteria | 835 |
| 185 | Ga0501069_0002742 | 3300049585 | Bacteria | 8994 |
| 186 | Ga0501069_0069959 | 3300049585 | Bacteria | 1965 |
| 187 | Ga0501070_0019848 | 3300049586 | Bacteria | 5635 |
| 188 | Ga0501070_0026846 | 3300049586 | Bacteria | 4829 |
| 189 | Ga0501070_0073750 | 3300049586 | Bacteria | 2824 |
| 190 | Ga0501070_0101767 | 3300049586 | Bacteria | 2376 |
| 191 | Ga0501071_0030003 | 3300049587 | Bacteria | 3844 |
| 192 | Ga0501072_0011298 | 3300049588 | Bacteria | 6821 |
| 193 | Ga0501072_0050652 | 3300049588 | Bacteria | 3270 |
| 194 | Ga0501072_0091630 | 3300049588 | Unclassified | 2413 |
| 195 | Ga0501072_0161180 | 3300049588 | Bacteria | 1789 |
| 196 | Ga0501073_0003519 | 3300049589 | Bacteria | 11767 |
| 197 | Ga0501073_0005189 | 3300049589 | Bacteria | 9763 |
| 198 | Ga0501073_0019060 | 3300049589 | Bacteria | 4958 |
| 199 | Ga0501073_0030632 | 3300049589 | Bacteria | 3840 |
| 200 | Ga0501073_0244251 | 3300049589 | Unclassified | 1239 |
| 201 | Ga0501074_0026622 | 3300049590 | Bacteria | 4193 |
| 202 | Ga0501074_0039395 | 3300049590 | Bacteria | 3423 |
| 203 | Ga0501074_0335337 | 3300049590 | Bacteria | 1073 |
| 204 | Ga0501074_0462594 | 3300049590 | Bacteria | 899 |
| 205 | Ga0501075_0024055 | 3300049591 | Bacteria | 4460 |
| 206 | Ga0501075_0180716 | 3300049591 | Bacteria | 1609 |
| 207 | Ga0501075_0219967 | 3300049591 | Bacteria | 1449 |
| 208 | Ga0501076_0060748 | 3300049592 | Bacteria | 3007 |
| 209 | Ga0501076_0101963 | 3300049592 | Bacteria | 2313 |
| 210 | Ga0501076_0144319 | 3300049592 | Bacteria | 1935 |
| 211 | Ga0501076_0278710 | 3300049592 | Bacteria | 1370 |
| 212 | Ga0501077_0034940 | 3300049593 | Bacteria | 3200 |
| 213 | Ga0501077_0373745 | 3300049593 | Bacteria | 910 |
| 214 | Ga0501079_0007156 | 3300049741 | Bacteria | 8422 |
| 215 | Ga0501079_0041200 | 3300049741 | Bacteria | 3564 |
| 216 | Ga0501079_0147882 | 3300049741 | Bacteria | 1831 |
| 217 | Ga0501079_0207616 | 3300049741 | Bacteria | 1530 |
| 218 | Ga0501079_0272046 | 3300049741 | Bacteria | 1324 |
| 219 | Ga0501079_0342534 | 3300049741 | Bacteria | 1171 |
| 220 | Ga0501080_0008475 | 3300049742 | Bacteria | 9316 |
| 221 | Ga0501080_0010106 | 3300049742 | Bacteria | 8630 |
| 222 | Ga0501080_0018731 | 3300049742 | Bacteria | 6406 |
| 223 | Ga0501080_0093020 | 3300049742 | Bacteria | 2800 |
| 224 | Ga0501080_0115787 | 3300049742 | Bacteria | 2485 |
| 225 | Ga0501081_0023644 | 3300049743 | Bacteria | 4121 |
| 226 | Ga0501081_0076571 | 3300049743 | Bacteria | 2336 |
| 227 | Ga0501081_0170064 | 3300049743 | Bacteria | 1573 |
| 228 | Ga0501083_0003458 | 3300049744 | Bacteria | 11037 |
| 229 | Ga0501083_0023461 | 3300049744 | Bacteria | 4277 |
| 230 | Ga0501083_0029019 | 3300049744 | Bacteria | 3810 |
| 231 | Ga0501083_0071449 | 3300049744 | Bacteria | 2307 |
| 232 | Ga0501083_0094770 | 3300049744 | Bacteria | 1970 |
| 233 | Ga0501035_0021939 | 3300049822 | Bacteria | 5866 |
| 234 | Ga0501035_0065053 | 3300049822 | Bacteria | 3239 |
| 235 | Ga0501035_0089185 | 3300049822 | Bacteria | 2716 |
| 236 | Ga0501035_0139709 | 3300049822 | Bacteria | 2107 |
| 237 | Ga0501035_0473077 | 3300049822 | Bacteria | 1034 |
| 238 | Ga0501044_0004622 | 3300049823 | Bacteria | 15405 |
| 239 | Ga0501044_0015792 | 3300049823 | Bacteria | 8128 |
| 240 | Ga0501044_0018436 | 3300049823 | Bacteria | 7477 |
| 241 | Ga0501044_0053517 | 3300049823 | Bacteria | 4152 |
| 242 | Ga0501044_0142840 | 3300049823 | Bacteria | 2381 |
| 243 | Ga0501044_0178628 | 3300049823 | Bacteria | 2090 |
| 244 | Ga0501045_0018225 | 3300049824 | Bacteria | 4991 |
| 245 | Ga0501045_0090521 | 3300049824 | Bacteria | 2261 |
| 246 | Ga0501045_0119562 | 3300049824 | Bacteria | 1956 |
| 247 | nmdc:mga05p37_403_c1 | 3300050507 | Bacteria | 46883 |
| 248 | nmdc:mga05p37_69926_c1 | 3300050507 | Bacteria | 4318 |
| 249 | nmdc:mga09592_47314_c1 | 3300050508 | Bacteria | 3625 |
| 250 | nmdc:mga09592_615492_c1 | 3300050508 | Bacteria | 929 |
| 251 | nmdc:mga06r32_545930_c1 | 3300050510 | Unclassified | 1133 |
| 252 | nmdc:mga08y16_181504_c1 | 3300050511 | Bacteria | 2185 |
| 253 | nmdc:mga08y16_271192_c1 | 3300050511 | Unclassified | 1752 |
| 254 | nmdc:mga08y16_413697_c1 | 3300050511 | Unclassified | 1379 |
| 255 | nmdc:mga08y16_466_c1 | 3300050511 | Bacteria | 37656 |
| 256 | nmdc:mga0n895_34729_c1 | 3300050512 | Bacteria | 4856 |
| 257 | nmdc:mga0n895_50574_c1 | 3300050512 | Bacteria | 4074 |
| 258 | Ga0501084_0009552 | 3300054114 | Bacteria | 8028 |
| 259 | Ga0501084_0014015 | 3300054114 | Bacteria | 6636 |
| 260 | Ga0501084_0017888 | 3300054114 | Bacteria | 5901 |
| 261 | Ga0501084_0026093 | 3300054114 | Bacteria | 4874 |
| 262 | Ga0501084_0133114 | 3300054114 | Bacteria | 2093 |
| 263 | Ga0501084_0135156 | 3300054114 | Bacteria | 2076 |
| 264 | Ga0590071_006740 | 3300059421 | Bacteria | 2725 |
| 265 | Ga0590075_033438 | 3300059424 | Bacteria | 1306 |
| 266 | Ga0590077_006265 | 3300059426 | Bacteria | 2439 |
| 267 | Ga0590077_035580 | 3300059426 | Bacteria | 1097 |
| 268 | Ga0501082_0004927 | 3300060353 | Bacteria | 11650 |
| 269 | Ga0501082_0030528 | 3300060353 | Bacteria | 4644 |
| 270 | Ga0501082_0030934 | 3300060353 | Bacteria | 4614 |
| 271 | Ga0501082_0043560 | 3300060353 | Bacteria | 3870 |
| 272 | Ga0501082_0048918 | 3300060353 | Bacteria | 3645 |
| 273 | Ga0501082_0050850 | 3300060353 | Bacteria | 3574 |
| 274 | Ga0530510_0104226 | 3300061734 | Bacteria | 2075 |
| 275 | Ga0501068_0318297 | |||
| 276 | Ga0065712_10018458 | |||
| 277 | Ga0065707_10087791 | |||
| 278 | Ga0068868_100004420 | |||
| 279 | Ga0070689_100289299 | |||
| 280 | Ga0070669_100124534 | |||
| 281 | Ga0070675_100303676 | |||
| 282 | Ga0070675_100419987 | |||
| 283 | Ga0070673_100124175 | |||
| 284 | Ga0070709_10000108 | |||
| 285 | Ga0070686_100030573 | |||
| 286 | Ga0070696_100319155 | |||
| 287 | Ga0068864_100045431 | |||
| 288 | Ga0068863_100193690 | |||
| 289 | Ga0068858_100008172 | |||
| 290 | Ga0068860_100006965 | |||
| 291 | Ga0068860_100571212 | |||
| 292 | Ga0068862_100000797 | |||
| 293 | Ga0068862_100152121 | |||
| 294 | Ga0097621_100049203 | |||
| 295 | Ga0075428_100198968 | |||
| 296 | Ga0075430_100408538 | |||
| 297 | Ga0075431_100437203 | |||
| 298 | Ga0075433_10338531 | |||
| 299 | Ga0075434_100084043 | |||
| 300 | Ga0075434_100396416 | |||
| 301 | Ga0075429_100046073 | |||
| 302 | Ga0097620_100025252 | |||
| 303 | Ga0111539_10002927 | |||
| 304 | Ga0111539_10035463 | |||
| 305 | Ga0111539_10097204 | |||
| 306 | Ga0111539_10243898 | |||
| 307 | Ga0111539_10745230 | |||
| 308 | Ga0114129_10001036 | |||
| 309 | Ga0105242_10164275 | |||
| 310 | Ga0105242_10200528 | |||
| 311 | Ga0105248_10201930 | |||
| 312 | Ga0105248_10289057 | |||
| 313 | Ga0105249_10049075 | |||
| 314 | Ga0105249_10111528 | |||
| 315 | Ga0105249_10422012 | |||
| 316 | Ga0105249_10529829 | |||
| 317 | Ga0163162_10149573 | |||
| 318 | Ga0163163_10000036 | |||
| 319 | Ga0157380_10175653 | |||
| 320 | Ga0157380_10458477 | |||
| 321 | Ga0157380_10717729 | |||
| 322 | Ga0157376_10399378 | |||
| 323 | Ga0157376_10403869 | |||
| 324 | Ga0207699_10000244 | |||
| 325 | Ga0207681_10168101 | |||
| 326 | Ga0207650_10220987 | |||
| 327 | Ga0207659_10079926 | |||
| 328 | Ga0207686_10322635 | |||
| 329 | Ga0207711_10121845 | |||
| 330 | Ga0207711_10405777 | |||
| 331 | Ga0207712_10293881 | |||
| 332 | Ga0207703_10033848 | |||
| 333 | Ga0207641_10157817 | |||
| 334 | Ga0207676_10208963 | |||
| 335 | Ga0207676_10828342 | |||
| 336 | Ga0207675_100088153 | |||
| 337 | Ga0209969_1000430 | |||
| 338 | Ga0209995_1000255 | |||
| 339 | Ga0209971_1004033 | |||
| 340 | Ga0209974_10013496 | |||
| 341 | Ga0209974_10035311 | |||
| 342 | Ga0207428_10002096 | |||
| 343 | Ga0207428_10176063 | |||
| 344 | Ga0268265_10000708 | |||
| 345 | Ga0268265_10102443 | |||
| 346 | Ga0268264_10365684 | |||
| 347 | Ga0307408_100009359 | |||
| 348 | Ga0316576_10465262 | |||
| 349 | Ga0307405_10071645 | |||
| 350 | Ga0307413_10028420 | |||
| 351 | Ga0307410_10038654 | |||
| 352 | Ga0307406_10011274 | |||
| 353 | Ga0307407_10003888 | |||
| 354 | Ga0307412_10149080 | |||
| 355 | Ga0307409_100006284 | |||
| 356 | Ga0307416_100000945 | |||
| 357 | Ga0307414_10036721 | |||
| 358 | Ga0307411_10033964 | |||
| 359 | Ga0307415_100016283 | |||
| 360 | Ga0373957_0002748 | |||
| 361 | Ga0373937_0000120 | |||
| 362 | Ga0451789_1210553 | |||
| 363 | Ga0439446_0010109 | |||
| 364 | Ga0439460_0013040 | |||
| 365 | Ga0439460_0029204 | |||
| 366 | Ga0453683_0000720 | |||
| 367 | Ga0453684_0027706 | |||
| 368 | Ga0453684_0352055 | |||
| 369 | Ga0451576_0011381 | |||
| 370 | Ga0451576_0486072 | |||
| 371 | Ga0495592_0193093 | |||
| 372 | Ga0495630_0253386 | |||
| 373 | Ga0495587_0080331 | |||
| 374 | Ga0495684_0082938 | |||
| 375 | Ga0496105_0404604 | |||
| 376 | Ga0496110_0021401 | |||
| 377 | Ga0496114_0071083 | |||
| 378 | Ga0501031_0016027 | |||
| 379 | Ga0501031_0047800 | |||
| 380 | Ga0501031_0184816 | |||
| 381 | Ga0501031_0264491 | |||
| 382 | Ga0501032_0025665 | |||
| 383 | Ga0501032_0093792 | |||
| 384 | Ga0501033_0041590 | |||
| 385 | Ga0501033_0063560 | |||
| 386 | Ga0501033_0270912 | |||
| 387 | Ga0501033_0324819 | |||
| 388 | Ga0501034_0002697 | |||
| 389 | Ga0501034_0007788 | |||
| 390 | Ga0501034_0026566 | |||
| 391 | Ga0501034_0030578 | |||
| 392 | Ga0501034_0054278 | |||
| 393 | Ga0501034_0058041 | |||
| 394 | Ga0501034_0229941 | |||
| 395 | Ga0501034_0496385 | |||
| 396 | Ga0501034_0577489 | |||
| 397 | Ga0501036_0018539 | |||
| 398 | Ga0501036_0021258 | |||
| 399 | Ga0501036_0022732 | |||
| 400 | Ga0501036_0177943 | |||
| 401 | Ga0501036_0238240 | |||
| 402 | Ga0501037_0009289 | |||
| 403 | Ga0501037_0012398 | |||
| 404 | Ga0501037_0070327 | |||
| 405 | Ga0501038_0002457 | |||
| 406 | Ga0501038_0009670 | |||
| 407 | Ga0501038_0031138 | |||
| 408 | Ga0501038_0085058 | |||
| 409 | Ga0501038_0135237 | |||
| 410 | Ga0501038_0198510 | |||
| 411 | Ga0501039_0024914 | |||
| 412 | Ga0501039_0074796 | |||
| 413 | Ga0501039_0161989 | |||
| 414 | Ga0501039_0301161 | |||
| 415 | Ga0501040_0007987 | |||
| 416 | Ga0501040_0134928 | |||
| 417 | Ga0501040_0226460 | |||
| 418 | Ga0501041_0123442 | |||
| 419 | Ga0501041_0168177 | |||
| 420 | Ga0501042_0080807 | |||
| 421 | Ga0501042_0155868 | |||
| 422 | Ga0501042_0254571 | |||
| 423 | Ga0501043_0001782 | |||
| 424 | Ga0501043_0007251 | |||
| 425 | Ga0501043_0036197 | |||
| 426 | Ga0501043_0037977 | |||
| 427 | Ga0501043_0050724 | |||
| 428 | Ga0501043_0080610 | |||
| 429 | Ga0501043_0089711 | |||
| 430 | Ga0501046_0002993 | |||
| 431 | Ga0501046_0029961 | |||
| 432 | Ga0501046_0038021 | |||
| 433 | Ga0501046_0094049 | |||
| 434 | Ga0501046_0094345 | |||
| 435 | Ga0501046_0095081 | |||
| 436 | Ga0501046_0111409 | |||
| 437 | Ga0501047_0000865 | |||
| 438 | Ga0501047_0007726 | |||
| 439 | Ga0501047_0022751 | |||
| 440 | Ga0501047_0026544 | |||
| 441 | Ga0501047_0027070 | |||
| 442 | Ga0501047_0143368 | |||
| 443 | Ga0501047_0165028 | |||
| 444 | Ga0501047_0238779 | |||
| 445 | Ga0501048_0009867 | |||
| 446 | Ga0501048_0015004 | |||
| 447 | Ga0501048_0016815 | |||
| 448 | Ga0501048_0032345 | |||
| 449 | Ga0501048_0063551 | |||
| 450 | Ga0501048_0114025 | |||
| 451 | Ga0501067_0004134 | |||
| 452 | Ga0501067_0005715 | |||
| 453 | Ga0501067_0015537 | |||
| 454 | Ga0501067_0095523 | |||
| 455 | Ga0501068_0035384 | |||
| 456 | Ga0501068_0054452 | |||
| 457 | Ga0501068_0119236 | |||
| 458 | Ga0501068_0448283 | |||
| 459 | Ga0501069_0002742 | |||
| 460 | Ga0501069_0069959 | |||
| 461 | Ga0501070_0019848 | |||
| 462 | Ga0501070_0026846 | |||
| 463 | Ga0501070_0073750 | |||
| 464 | Ga0501070_0101767 | |||
| 465 | Ga0501071_0030003 | |||
| 466 | Ga0501072_0011298 | |||
| 467 | Ga0501072_0050652 | |||
| 468 | Ga0501072_0091630 | |||
| 469 | Ga0501072_0161180 | |||
| 470 | Ga0501073_0003519 | |||
| 471 | Ga0501073_0005189 | |||
| 472 | Ga0501073_0019060 | |||
| 473 | Ga0501073_0030632 | |||
| 474 | Ga0501073_0244251 | |||
| 475 | Ga0501074_0026622 | |||
| 476 | Ga0501074_0039395 | |||
| 477 | Ga0501074_0335337 | |||
| 478 | Ga0501074_0462594 | |||
| 479 | Ga0501075_0024055 | |||
| 480 | Ga0501075_0180716 | |||
| 481 | Ga0501075_0219967 | |||
| 482 | Ga0501076_0060748 | |||
| 483 | Ga0501076_0101963 | |||
| 484 | Ga0501076_0144319 | |||
| 485 | Ga0501076_0278710 | |||
| 486 | Ga0501077_0034940 | |||
| 487 | Ga0501077_0373745 | |||
| 488 | Ga0501079_0007156 | |||
| 489 | Ga0501079_0041200 | |||
| 490 | Ga0501079_0147882 | |||
| 491 | Ga0501079_0207616 | |||
| 492 | Ga0501079_0272046 | |||
| 493 | Ga0501079_0342534 | |||
| 494 | Ga0501080_0008475 | |||
| 495 | Ga0501080_0010106 | |||
| 496 | Ga0501080_0018731 | |||
| 497 | Ga0501080_0093020 | |||
| 498 | Ga0501080_0115787 | |||
| 499 | Ga0501081_0023644 | |||
| 500 | Ga0501081_0076571 | |||
| 501 | Ga0501081_0170064 | |||
| 502 | Ga0501083_0003458 | |||
| 503 | Ga0501083_0023461 | |||
| 504 | Ga0501083_0029019 | |||
| 505 | Ga0501083_0071449 | |||
| 506 | Ga0501083_0094770 | |||
| 507 | Ga0501035_0021939 | |||
| 508 | Ga0501035_0065053 | |||
| 509 | Ga0501035_0089185 | |||
| 510 | Ga0501035_0139709 | |||
| 511 | Ga0501035_0473077 | |||
| 512 | Ga0501044_0004622 | |||
| 513 | Ga0501044_0015792 | |||
| 514 | Ga0501044_0018436 | |||
| 515 | Ga0501044_0053517 | |||
| 516 | Ga0501044_0142840 | |||
| 517 | Ga0501044_0178628 | |||
| 518 | Ga0501045_0018225 | |||
| 519 | Ga0501045_0090521 | |||
| 520 | Ga0501045_0119562 | |||
| 521 | nmdc:mga05p37_403_c1 | |||
| 522 | nmdc:mga05p37_69926_c1 | |||
| 523 | nmdc:mga09592_47314_c1 | |||
| 524 | nmdc:mga09592_615492_c1 | |||
| 525 | nmdc:mga06r32_545930_c1 | |||
| 526 | nmdc:mga08y16_181504_c1 | |||
| 527 | nmdc:mga08y16_271192_c1 | |||
| 528 | nmdc:mga08y16_413697_c1 | |||
| 529 | nmdc:mga08y16_466_c1 | |||
| 530 | nmdc:mga0n895_34729_c1 | |||
| 531 | nmdc:mga0n895_50574_c1 | |||
| 532 | Ga0501084_0009552 | |||
| 533 | Ga0501084_0014015 | |||
| 534 | Ga0501084_0017888 | |||
| 535 | Ga0501084_0026093 | |||
| 536 | Ga0501084_0133114 | |||
| 537 | Ga0501084_0135156 | |||
| 538 | Ga0590071_006740 | |||
| 539 | Ga0590075_033438 | |||
| 540 | Ga0590077_006265 | |||
| 541 | Ga0590077_035580 | |||
| 542 | Ga0501082_0004927 | |||
| 543 | Ga0501082_0030528 | |||
| 544 | Ga0501082_0030934 | |||
| 545 | Ga0501082_0043560 | |||
| 546 | Ga0501082_0048918 | |||
| 547 | Ga0501082_0050850 | |||
| 548 | Ga0530510_0104226 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1e9n-assembly1.cif.gz_A | a second divalent metal ion in the active site of a new crystal form of human apurinic/apyrimidinic endonuclease, ape1, and its implications for the catalytic mechanism | 0.9095 | 1 | 247 |
| 6p93-assembly1.cif.gz_B | human ape1 k98a ap-endonuclease product complex | 0.9062 | 1 | 247 |
| 6p94-assembly1.cif.gz_B | human ape1 c65a ap-endonuclease product complex | 0.9062 | 1 | 247 |
| 1dew-assembly1.cif.gz_B | crystal structure of human ape1 bound to abasic dna | 0.9062 | 1 | 247 |
| 6bor-assembly2.cif.gz_B | human ape1 substrate complex with an g/g mismatch adjacent the thf | 0.9034 | 1 | 247 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4b5gC00 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9006 | 1 | 247 | 3.60.10.10 |
| af_P27864_388_678_3.60.10.10 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.897 | 1 | 248 | 3.60.10.10 |
| 4qh9A00 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.8951 | 1 | 247 | 3.60.10.10 |
| 6fk4A00 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.8939 | 1 | 248 | 3.60.10.10 |
| 4b5gC00 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.8937 | 1 | 247 | 3.60.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3N5G9P9-F1-model_v4 | Exodeoxyribonuclease III | 0.9869 | 139 | 248 |
GO:0006281
GO:0008311 GO:0046872 |
| AF-A0A2V7PKQ2-F1-model_v4 | Exodeoxyribonuclease III | 0.9774 | 1 | 248 |
GO:0003677
GO:0004519 GO:0006281 GO:0008311 GO:0046872 |
| AF-A0A2V7WBN2-F1-model_v4 | Exodeoxyribonuclease III | 0.9765 | 1 | 248 |
GO:0003677
GO:0004519 GO:0006281 GO:0008311 GO:0046872 |
| AF-A0A534P6L1-F1-model_v4 | Exodeoxyribonuclease III (EC 3.1.11.2) | 0.9742 | 1 | 247 |
GO:0003677
GO:0004519 GO:0006281 GO:0008311 GO:0046872 |
| AF-A0A2V7PKQ2-F1-model_v4 | Exodeoxyribonuclease III | 0.9735 | 1 | 248 |
GO:0003677
GO:0004519 GO:0006281 GO:0008311 GO:0046872 |