F379886

General Info

Members Datasets Scaffolds Average Seq Length
274 156 548 434

Family's Representative Sequence

Representative Sequence 3300038726|Ga0400490_17741|Ga0400490_17741_2861_4270
Length 469
Sequence VLGIRKVINRPRASEHPNSKFKIHNSFTKMPIHNSLNYRVEPGGKLTGRLRVPGDKSISHRSIMLGSLADGVTEVTGFLEGEDSLATLNAFRAMGVAIEGPDEGRVTIQGVGMHGLIKPEAPLDLGNSGTSMRLLTGLLAGHGLAVTLTGDSSLSGRPMKRIIEPLSRMGASISATEQGTAPLAIAAGHPLRGIDYELPMASAQVKSAILLAGLYAEGETSVSEPAPTRDHTERMLEGFGYEVKREGNRIALRGGGQLKACRIDVPADISSATFFILGASIAPDSEVVLEHVGINPTRDGVISILRLMGADIELENKRKVGGEPVADLRIRSSRLRGIDIPEALVPLAIDEFPAIFIAAACAEGTTRLSGAEELRVKESDRIQVMTDGLTVLGIEARPSADGIQIEGGRLSGGCVESHGDHRIAMSFAMAALQASGPVQILDCANVNTSFPGFVELAAAAGLQIRQEGA

Samples

Sample ID Description Type Environment
1 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013874 Rhizosphere microbial communities from switchgrass harvested rhizosphere in Austin, TX, USA - RS_213 Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
75 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
76 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
77 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
78 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
79 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
80 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
81 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
82 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
86 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
87 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
88 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
90 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
92 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
93 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
96 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
100 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
101 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
102 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
103 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
104 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
105 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
106 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
107 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
110 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
111 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
112 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
113 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
114 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
115 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
118 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
119 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
120 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
123 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
124 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
134 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
135 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
136 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
137 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
138 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
139 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
140 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
151 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
155 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
156 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.72
Metatranscriptomes 2.55
Isolates 0.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.73
Nodule 0
Rhizoplane 4.38
Rhizosphere 68.98
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0400490_17741 3300038726 Bacteria 6696
2 rootL2_10120824 3300003322 Bacteria 3005
3 Ga0070666_10108542 3300005335 Bacteria 1918
4 Ga0070680_100078164 3300005336 Bacteria 2726
5 Ga0070682_100027601 3300005337 Bacteria 3408
6 Ga0068868_100012693 3300005338 Bacteria 6162
7 Ga0070660_100061850 3300005339 Bacteria 2907
8 Ga0070692_10050839 3300005345 Bacteria 2154
9 Ga0070671_100075308 3300005355 Bacteria 2819
10 Ga0070710_10008805 3300005437 Bacteria 4923
11 Ga0070711_100002829 3300005439 Bacteria 9967
12 Ga0070705_100026393 3300005440 Bacteria 3161
13 Ga0070678_100012579 3300005456 Bacteria 5269
14 Ga0070681_10005289 3300005458 Bacteria 12465
15 Ga0070681_10007738 3300005458 Bacteria 10503
16 Ga0070681_10029138 3300005458 Bacteria 5543
17 Ga0070681_10078312 3300005458 Bacteria 3262
18 Ga0070681_10144864 3300005458 Bacteria 2305
19 Ga0070679_100004029 3300005530 Bacteria 13542
20 Ga0068853_100052460 3300005539 Bacteria 3513
21 Ga0070686_100131925 3300005544 Bacteria 1729
22 Ga0070665_100003952 3300005548 Bacteria 15632
23 Ga0070665_100021526 3300005548 Bacteria 6482
24 Ga0070665_100057882 3300005548 Bacteria 3886
25 Ga0070665_100061998 3300005548 Bacteria 3749
26 Ga0070665_100125419 3300005548 Bacteria 2570
27 Ga0068855_100015685 3300005563 Bacteria 9116
28 Ga0068855_100029506 3300005563 Bacteria 6556
29 Ga0068856_100043387 3300005614 Bacteria 4425
30 Ga0068859_100000516 3300005617 Bacteria 38281
31 Ga0068859_100007900 3300005617 Bacteria 10796
32 Ga0068866_10006588 3300005718 Bacteria 4841
33 Ga0068863_100016971 3300005841 Bacteria 6982
34 Ga0068863_100062953 3300005841 Bacteria 3508
35 Ga0068863_100084153 3300005841 Bacteria 3015
36 Ga0068858_100001604 3300005842 Bacteria 23097
37 Ga0068858_100010974 3300005842 Bacteria 8561
38 Ga0068858_100103158 3300005842 Bacteria 2660
39 Ga0068860_100001831 3300005843 Bacteria 22651
40 Ga0068860_100009048 3300005843 Bacteria 9912
41 Ga0070715_10022162 3300006163 Bacteria 2473
42 Ga0070716_100001177 3300006173 Bacteria 11510
43 Ga0097621_100093471 3300006237 Bacteria 2520
44 Ga0075433_10139252 3300006852 Bacteria 2157
45 Ga0075434_100021888 3300006871 Bacteria 6222
46 Ga0068865_100001769 3300006881 Bacteria 12679
47 Ga0097620_100000516 3300006931 Bacteria 38281
48 Ga0097620_100007900 3300006931 Bacteria 10796
49 Ga0105250_10041504 3300009092 Bacteria 1844
50 Ga0105240_10002715 3300009093 Bacteria 28097
51 Ga0105240_10086427 3300009093 Bacteria 3841
52 Ga0105240_10103373 3300009093 Bacteria 3462
53 Ga0105240_10122494 3300009093 Bacteria 3129
54 Ga0105240_10122628 3300009093 Bacteria 3128
55 Ga0105240_10139971 3300009093 Bacteria 2894
56 Ga0105245_10004876 3300009098 Bacteria 11810
57 Ga0105247_10000162 3300009101 Bacteria 65804
58 Ga0105247_10009324 3300009101 Bacteria 5958
59 Ga0114129_10006440 3300009147 Bacteria 16648
60 Ga0105241_10141961 3300009174 Bacteria 1956
61 Ga0105242_10007946 3300009176 Bacteria 8170
62 Ga0105248_10042831 3300009177 Bacteria 5076
63 Ga0105238_10017050 3300009551 Bacteria 7374
64 Ga0105238_10048723 3300009551 Bacteria 4268
65 Ga0105030_101216 3300009987 Bacteria 2287
66 Ga0105239_10141489 3300010375 Bacteria 2681
67 Ga0105239_10260282 3300010375 Bacteria 1950
68 Ga0157370_10018736 3300013104 Bacteria 6960
69 Ga0157369_10038680 3300013105 Bacteria 5216
70 Ga0157369_10298516 3300013105 Bacteria 1676
71 Ga0157374_10003005 3300013296 Bacteria 14114
72 Ga0157378_10007707 3300013297 Bacteria 9395
73 Ga0163162_10026584 3300013306 Bacteria 5721
74 Ga0157514_106067 3300013874 Bacteria 2120
75 Ga0163163_10019284 3300014325 Bacteria 6404
76 Ga0157379_10004317 3300014968 Bacteria 12160
77 Ga0157379_10008901 3300014968 Bacteria 8752
78 Ga0157376_10006288 3300014969 Bacteria 8380
79 Ga0207692_10022831 3300025898 Bacteria 2885
80 Ga0207710_10000707 3300025900 Bacteria 18686
81 Ga0207699_10014285 3300025906 Bacteria 4089
82 Ga0207707_10000035 3300025912 Bacteria 147299
83 Ga0207707_10002266 3300025912 Bacteria 17406
84 Ga0207707_10010217 3300025912 Bacteria 8149
85 Ga0207707_10052253 3300025912 Bacteria 3559
86 Ga0207707_10056048 3300025912 Bacteria 3428
87 Ga0207695_10030985 3300025913 Bacteria 5878
88 Ga0207695_10065823 3300025913 Bacteria 3725
89 Ga0207695_10084565 3300025913 Bacteria 3203
90 Ga0207695_10163331 3300025913 Bacteria 2157
91 Ga0207693_10000144 3300025915 Bacteria 65408
92 Ga0207660_10001962 3300025917 Bacteria 13718
93 Ga0207660_10050608 3300025917 Bacteria 2951
94 Ga0207652_10001503 3300025921 Bacteria 20587
95 Ga0207694_10138943 3300025924 Bacteria 1953
96 Ga0207700_10023480 3300025928 Bacteria 4252
97 Ga0207665_10052897 3300025939 Bacteria 2736
98 Ga0207689_10068320 3300025942 Bacteria 2920
99 Ga0207667_10008440 3300025949 Bacteria 12236
100 Ga0207667_10028648 3300025949 Bacteria 6047
101 Ga0207703_10000546 3300026035 Bacteria 38625
102 Ga0207703_10012354 3300026035 Bacteria 6657
103 Ga0207678_10007920 3300026067 Bacteria 9365
104 Ga0207641_10001048 3300026088 Bacteria 27913
105 Ga0207641_10007700 3300026088 Bacteria 8955
106 Ga0207648_10009986 3300026089 Bacteria 9032
107 Ga0207675_100004394 3300026118 Bacteria 13614
108 Ga0207683_10023466 3300026121 Bacteria 5308
109 Ga0268266_10001516 3300028379 Bacteria 27237
110 Ga0268266_10029839 3300028379 Bacteria 4634
111 Ga0268266_10042307 3300028379 Bacteria 3891
112 Ga0268266_10057710 3300028379 Bacteria 3341
113 Ga0268264_10001808 3300028381 Bacteria 19553
114 Ga0265334_10000065 3300028573 Bacteria 78374
115 Ga0307515_10007641 3300028794 Bacteria 21324
116 Ga0307515_10099996 3300028794 Bacteria 3516
117 Ga0307511_10003287 3300030521 Bacteria 16625
118 Ga0307509_10000496 3300031507 Bacteria 66653
119 Ga0316575_10061853 3300031665 Bacteria 1497
120 Ga0316579_10000260 3300031691 Bacteria 16208
121 Ga0316579_10002670 3300031691 Bacteria 6780
122 Ga0316576_10027051 3300031727 Bacteria 4030
123 Ga0316576_10110525 3300031727 Bacteria 2060
124 Ga0316578_10027256 3300031728 Bacteria 3228
125 Ga0316578_10055636 3300031728 Bacteria 2322
126 Ga0316578_10077123 3300031728 Bacteria 1979
127 Ga0316578_10092342 3300031728 Bacteria 1809
128 Ga0316577_10000712 3300031733 Bacteria 14131
129 Ga0316577_10042607 3300031733 Bacteria 2540
130 Ga0316577_10049564 3300031733 Bacteria 2343
131 Ga0307413_10138870 3300031824 Bacteria 1676
132 Ga0307416_100104302 3300032002 Bacteria 2478
133 Ga0307414_10207470 3300032004 Bacteria 1599
134 Ga0316583_10000743 3300032133 Bacteria 10178
135 Ga0316580_10001051 3300032139 Bacteria 6938
136 Ga0316580_10003317 3300032139 Bacteria 4555
137 Ga0316593_10000362 3300032168 Bacteria 8004
138 Ga0316593_10000440 3300032168 Bacteria 7578
139 Ga0316593_10022639 3300032168 Bacteria 1976
140 Ga0316593_10044887 3300032168 Bacteria 1480
141 Ga0307510_10000001 3300033180 Bacteria 1172244
142 Ga0316592_1001168 3300033524 Bacteria 4140
143 Ga0316596_1003581 3300033541 Bacteria 3420
144 Ga0316596_1015068 3300033541 Bacteria 1924
145 Ga0373946_0074648 3300035171 Bacteria 1472
146 Ga0316574_0001526 3300035398 Bacteria 11022
147 Ga0316574_0004615 3300035398 Bacteria 7246
148 Ga0316574_0005051 3300035398 Bacteria 7006
149 Ga0316574_0011102 3300035398 Bacteria 5110
150 Ga0316574_0015623 3300035398 Bacteria 4407
151 Ga0316574_0161993 3300035398 Bacteria 1440
152 Ga0373937_0012455 3300036401 Bacteria 7483
153 Ga0316582_0000274 3300036647 Bacteria 17560
154 Ga0316582_0004757 3300036647 Bacteria 6915
155 Ga0316582_0005141 3300036647 Bacteria 6694
156 Ga0316582_0137858 3300036647 Bacteria 1643
157 Ga0316584_0001914 3300036712 Bacteria 12953
158 Ga0316584_0054863 3300036712 Bacteria 2984
159 Ga0316584_0085387 3300036712 Bacteria 2363
160 Ga0316584_0120001 3300036712 Bacteria 1965
161 Ga0316584_0162237 3300036712 Bacteria 1660
162 Ga0395900_0108412 3300037418 Bacteria 2853
163 Ga0395898_0006912 3300037466 Bacteria 12064
164 Ga0395898_0111677 3300037466 Bacteria 2619
165 Ga0316581_0020998 3300037588 Bacteria 1916
166 Ga0316581_0027580 3300037588 Bacteria 1699
167 Ga0400484_09003 3300038725 Bacteria 18050
168 Ga0400484_13574 3300038725 Bacteria 12512
169 Ga0400484_15134 3300038725 Bacteria 3829
170 Ga0400484_31565 3300038725 Bacteria 24720
171 Ga0400490_01702 3300038726 Bacteria 55809
172 Ga0400490_04978 3300038726 Bacteria 7415
173 Ga0400490_06232 3300038726 Bacteria 44987
174 Ga0400490_12778 3300038726 Bacteria 58313
175 Ga0400490_22336 3300038726 Bacteria 35091
176 Ga0400490_28201 3300038726 Bacteria 12305
177 Ga0400490_39255 3300038726 Bacteria 2866
178 Ga0400490_55790 3300038726 Bacteria 15146
179 Ga0400491_01032 3300038727 Bacteria 6398
180 Ga0400491_14091 3300038727 Bacteria 2467
181 Ga0400491_15794 3300038727 Bacteria 7500
182 Ga0400485_06896 3300038735 Bacteria 28258
183 Ga0400485_10065 3300038735 Bacteria 1803
184 Ga0400488_03584 3300038741 Bacteria 2678
185 Ga0400488_05123 3300038741 Bacteria 2938
186 Ga0400488_42160 3300038741 Bacteria 20839
187 Ga0400488_43864 3300038741 Bacteria 2940
188 Ga0400488_48107 3300038741 Bacteria 1256
189 Ga0400488_59534 3300038741 Bacteria 5174
190 Ga0400486_08957 3300038742 Bacteria 2323
191 Ga0400486_10955 3300038742 Bacteria 40692
192 Ga0400486_26802 3300038742 Bacteria 3942
193 Ga0400483_002956 3300039062 Bacteria 2212
194 Ga0400483_017132 3300039062 Bacteria 14508
195 Ga0400483_027967 3300039062 Bacteria 4009
196 Ga0400483_037322 3300039062 Bacteria 18568
197 Ga0400483_056346 3300039062 Bacteria 8913
198 Ga0400483_113280 3300039062 Bacteria 2190
199 Ga0400483_184181 3300039062 Bacteria 18314
200 Ga0400483_236883 3300039062 Bacteria 13506
201 Ga0400483_256675 3300039062 Bacteria 25394
202 Ga0400483_260281 3300039062 Bacteria 23990
203 Ga0400483_263824 3300039062 Bacteria 2075
204 Ga0400489_07724 3300039093 Bacteria 2999
205 Ga0400489_47851 3300039093 Bacteria 3907
206 Ga0400487_10351 3300039110 Bacteria 5351
207 Ga0400487_18578 3300039110 Bacteria 7045
208 Ga0400487_21137 3300039110 Bacteria 61235
209 Ga0400487_28502 3300039110 Bacteria 2471
210 Ga0400487_41274 3300039110 Bacteria 1542
211 Ga0400487_60250 3300039110 Bacteria 31416
212 Ga0400487_64319 3300039110 Bacteria 15903
213 Ga0436365_0484474 3300039437 Bacteria 10353
214 Ga0436363_0049716 3300039450 Bacteria 3616
215 Ga0436362_0260495 3300039453 Bacteria 5571
216 Ga0439434_0023377 3300042435 Bacteria 1861
217 Ga0451577_0000705 3300042876 Bacteria 52191
218 Ga0466969_0000641 3300044656 Bacteria 18885
219 Ga0466966_0001146 3300044684 Bacteria 17030
220 Ga0466964_0000270 3300044706 Bacteria 15055
221 Ga0453684_0001232 3300044712 Bacteria 78122
222 Ga0453684_0132006 3300044712 Bacteria 2995
223 Ga0466971_0000248 3300044719 Bacteria 20646
224 Ga0466970_0000992 3300044765 Bacteria 13656
225 Ga0466957_0001315 3300044842 Bacteria 12982
226 Ga0466959_0000450 3300045049 Bacteria 23931
227 Ga0451576_0118604 3300045051 Bacteria 2755
228 Ga0495618_0078094 3300046514 Bacteria 2110
229 Ga0495586_0001305 3300046535 Bacteria 13910
230 Ga0496100_0010515 3300048903 Bacteria 5241
231 Ga0496102_0005056 3300048905 Bacteria 11165
232 Ga0496102_0008412 3300048905 Bacteria 8842
233 Ga0496104_0066465 3300048907 Bacteria 3423
234 Ga0496106_0008357 3300048909 Bacteria 7664
235 Ga0496108_0100954 3300048911 Bacteria 2461
236 Ga0496108_0146745 3300048911 Bacteria 2034
237 Ga0496111_0006662 3300048914 Bacteria 7513
238 Ga0496112_0040034 3300048915 Bacteria 4581
239 Ga0496112_0172355 3300048915 Bacteria 2129
240 Ga0496113_0048453 3300048916 Bacteria 3161
241 Ga0496115_0016390 3300048918 Bacteria 5643
242 Ga0496116_0029490 3300048919 Bacteria 3954
243 Ga0496117_0000155 3300048920 Bacteria 146091
244 Ga0496118_0000066 3300048921 Bacteria 207678
245 Ga0496119_0001760 3300048922 Bacteria 25245
246 Ga0496120_0001239 3300048923 Bacteria 32260
247 Ga0496121_0001380 3300048924 Bacteria 41120
248 Ga0496121_0107114 3300048924 Bacteria 2141
249 Ga0496121_0183075 3300048924 Bacteria 1509
250 Ga0496124_0006898 3300048927 Bacteria 12205
251 Ga0496125_0001953 3300048928 Bacteria 28140
252 Ga0496125_0009370 3300048928 Bacteria 10083
253 Ga0496125_0011258 3300048928 Bacteria 8965
254 Ga0496126_0011004 3300048929 Bacteria 9411
255 Ga0496126_0077585 3300048929 Bacteria 2945
256 Ga0501039_0088559 3300049575 Bacteria 2411
257 Ga0501040_0000159 3300049576 Bacteria 37483
258 Ga0501040_0016892 3300049576 Bacteria 4837
259 Ga0501042_0001075 3300049578 Bacteria 15655
260 Ga0501042_0043633 3300049578 Bacteria 3193
261 Ga0501042_0121928 3300049578 Bacteria 1877
262 Ga0501067_0018397 3300049583 Bacteria 3871
263 Ga0501073_0009278 3300049589 Bacteria 7256
264 Ga0501073_0080415 3300049589 Bacteria 2268
265 Ga0501083_0034813 3300049744 Bacteria 3443
266 Ga0501044_0190285 3300049823 Bacteria 2015
267 nmdc:mga05p37_39937_c1 3300050507 Bacteria 5762
268 Ga0500583_0042176 3300053092 Bacteria 2077
269 Ga0500650_0000143 3300053098 Bacteria 18700
270 Ga0501084_0049391 3300054114 Bacteria 3522
271 Ga0501082_0015849 3300060353 Bacteria 6482
272 Ga0466962_0004019 3300061719 Bacteria 7045
273 2894511939 2894510363 Bacteria 5121143
274 2989395086 2989392574 Bacteria 4554005
275 Ga0400490_17741
276 rootL2_10120824
277 Ga0070666_10108542
278 Ga0070680_100078164
279 Ga0070682_100027601
280 Ga0068868_100012693
281 Ga0070660_100061850
282 Ga0070692_10050839
283 Ga0070671_100075308
284 Ga0070710_10008805
285 Ga0070711_100002829
286 Ga0070705_100026393
287 Ga0070678_100012579
288 Ga0070681_10005289
289 Ga0070681_10007738
290 Ga0070681_10029138
291 Ga0070681_10078312
292 Ga0070681_10144864
293 Ga0070679_100004029
294 Ga0068853_100052460
295 Ga0070686_100131925
296 Ga0070665_100003952
297 Ga0070665_100021526
298 Ga0070665_100057882
299 Ga0070665_100061998
300 Ga0070665_100125419
301 Ga0068855_100015685
302 Ga0068855_100029506
303 Ga0068856_100043387
304 Ga0068859_100000516
305 Ga0068859_100007900
306 Ga0068866_10006588
307 Ga0068863_100016971
308 Ga0068863_100062953
309 Ga0068863_100084153
310 Ga0068858_100001604
311 Ga0068858_100010974
312 Ga0068858_100103158
313 Ga0068860_100001831
314 Ga0068860_100009048
315 Ga0070715_10022162
316 Ga0070716_100001177
317 Ga0097621_100093471
318 Ga0075433_10139252
319 Ga0075434_100021888
320 Ga0068865_100001769
321 Ga0097620_100000516
322 Ga0097620_100007900
323 Ga0105250_10041504
324 Ga0105240_10002715
325 Ga0105240_10086427
326 Ga0105240_10103373
327 Ga0105240_10122494
328 Ga0105240_10122628
329 Ga0105240_10139971
330 Ga0105245_10004876
331 Ga0105247_10000162
332 Ga0105247_10009324
333 Ga0114129_10006440
334 Ga0105241_10141961
335 Ga0105242_10007946
336 Ga0105248_10042831
337 Ga0105238_10017050
338 Ga0105238_10048723
339 Ga0105030_101216
340 Ga0105239_10141489
341 Ga0105239_10260282
342 Ga0157370_10018736
343 Ga0157369_10038680
344 Ga0157369_10298516
345 Ga0157374_10003005
346 Ga0157378_10007707
347 Ga0163162_10026584
348 Ga0157514_106067
349 Ga0163163_10019284
350 Ga0157379_10004317
351 Ga0157379_10008901
352 Ga0157376_10006288
353 Ga0207692_10022831
354 Ga0207710_10000707
355 Ga0207699_10014285
356 Ga0207707_10000035
357 Ga0207707_10002266
358 Ga0207707_10010217
359 Ga0207707_10052253
360 Ga0207707_10056048
361 Ga0207695_10030985
362 Ga0207695_10065823
363 Ga0207695_10084565
364 Ga0207695_10163331
365 Ga0207693_10000144
366 Ga0207660_10001962
367 Ga0207660_10050608
368 Ga0207652_10001503
369 Ga0207694_10138943
370 Ga0207700_10023480
371 Ga0207665_10052897
372 Ga0207689_10068320
373 Ga0207667_10008440
374 Ga0207667_10028648
375 Ga0207703_10000546
376 Ga0207703_10012354
377 Ga0207678_10007920
378 Ga0207641_10001048
379 Ga0207641_10007700
380 Ga0207648_10009986
381 Ga0207675_100004394
382 Ga0207683_10023466
383 Ga0268266_10001516
384 Ga0268266_10029839
385 Ga0268266_10042307
386 Ga0268266_10057710
387 Ga0268264_10001808
388 Ga0265334_10000065
389 Ga0307515_10007641
390 Ga0307515_10099996
391 Ga0307511_10003287
392 Ga0307509_10000496
393 Ga0316575_10061853
394 Ga0316579_10000260
395 Ga0316579_10002670
396 Ga0316576_10027051
397 Ga0316576_10110525
398 Ga0316578_10027256
399 Ga0316578_10055636
400 Ga0316578_10077123
401 Ga0316578_10092342
402 Ga0316577_10000712
403 Ga0316577_10042607
404 Ga0316577_10049564
405 Ga0307413_10138870
406 Ga0307416_100104302
407 Ga0307414_10207470
408 Ga0316583_10000743
409 Ga0316580_10001051
410 Ga0316580_10003317
411 Ga0316593_10000362
412 Ga0316593_10000440
413 Ga0316593_10022639
414 Ga0316593_10044887
415 Ga0307510_10000001
416 Ga0316592_1001168
417 Ga0316596_1003581
418 Ga0316596_1015068
419 Ga0373946_0074648
420 Ga0316574_0001526
421 Ga0316574_0004615
422 Ga0316574_0005051
423 Ga0316574_0011102
424 Ga0316574_0015623
425 Ga0316574_0161993
426 Ga0373937_0012455
427 Ga0316582_0000274
428 Ga0316582_0004757
429 Ga0316582_0005141
430 Ga0316582_0137858
431 Ga0316584_0001914
432 Ga0316584_0054863
433 Ga0316584_0085387
434 Ga0316584_0120001
435 Ga0316584_0162237
436 Ga0395900_0108412
437 Ga0395898_0006912
438 Ga0395898_0111677
439 Ga0316581_0020998
440 Ga0316581_0027580
441 Ga0400484_09003
442 Ga0400484_13574
443 Ga0400484_15134
444 Ga0400484_31565
445 Ga0400490_01702
446 Ga0400490_04978
447 Ga0400490_06232
448 Ga0400490_12778
449 Ga0400490_22336
450 Ga0400490_28201
451 Ga0400490_39255
452 Ga0400490_55790
453 Ga0400491_01032
454 Ga0400491_14091
455 Ga0400491_15794
456 Ga0400485_06896
457 Ga0400485_10065
458 Ga0400488_03584
459 Ga0400488_05123
460 Ga0400488_42160
461 Ga0400488_43864
462 Ga0400488_48107
463 Ga0400488_59534
464 Ga0400486_08957
465 Ga0400486_10955
466 Ga0400486_26802
467 Ga0400483_002956
468 Ga0400483_017132
469 Ga0400483_027967
470 Ga0400483_037322
471 Ga0400483_056346
472 Ga0400483_113280
473 Ga0400483_184181
474 Ga0400483_236883
475 Ga0400483_256675
476 Ga0400483_260281
477 Ga0400483_263824
478 Ga0400489_07724
479 Ga0400489_47851
480 Ga0400487_10351
481 Ga0400487_18578
482 Ga0400487_21137
483 Ga0400487_28502
484 Ga0400487_41274
485 Ga0400487_60250
486 Ga0400487_64319
487 Ga0436365_0484474
488 Ga0436363_0049716
489 Ga0436362_0260495
490 Ga0439434_0023377
491 Ga0451577_0000705
492 Ga0466969_0000641
493 Ga0466966_0001146
494 Ga0466964_0000270
495 Ga0453684_0001232
496 Ga0453684_0132006
497 Ga0466971_0000248
498 Ga0466970_0000992
499 Ga0466957_0001315
500 Ga0466959_0000450
501 Ga0451576_0118604
502 Ga0495618_0078094
503 Ga0495586_0001305
504 Ga0496100_0010515
505 Ga0496102_0005056
506 Ga0496102_0008412
507 Ga0496104_0066465
508 Ga0496106_0008357
509 Ga0496108_0100954
510 Ga0496108_0146745
511 Ga0496111_0006662
512 Ga0496112_0040034
513 Ga0496112_0172355
514 Ga0496113_0048453
515 Ga0496115_0016390
516 Ga0496116_0029490
517 Ga0496117_0000155
518 Ga0496118_0000066
519 Ga0496119_0001760
520 Ga0496120_0001239
521 Ga0496121_0001380
522 Ga0496121_0107114
523 Ga0496121_0183075
524 Ga0496124_0006898
525 Ga0496125_0001953
526 Ga0496125_0009370
527 Ga0496125_0011258
528 Ga0496126_0011004
529 Ga0496126_0077585
530 Ga0501039_0088559
531 Ga0501040_0000159
532 Ga0501040_0016892
533 Ga0501042_0001075
534 Ga0501042_0043633
535 Ga0501042_0121928
536 Ga0501067_0018397
537 Ga0501073_0009278
538 Ga0501073_0080415
539 Ga0501083_0034813
540 Ga0501044_0190285
541 nmdc:mga05p37_39937_c1
542 Ga0500583_0042176
543 Ga0500650_0000143
544 Ga0501084_0049391
545 Ga0501082_0015849
546 Ga0466962_0004019
547 2894511939
548 2989395086

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00275

EPSP_synthase

EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)

40

456

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5buf-assembly2.cif.gz_B 2.37 angstrom structure of epsp synthase from acinetobacter baumannii 0.9696 1 431
5buf-assembly2.cif.gz_B 2.37 angstrom structure of epsp synthase from acinetobacter baumannii 0.9674 1 431
3rmt-assembly1.cif.gz_C-2 crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate synthase from bacillus halodurans c-125 0.9631 1 424
3rmt-assembly1.cif.gz_B crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate synthase from bacillus halodurans c-125 0.9562 5 424
5bs5-assembly2.cif.gz_B epsp synthase from acinetobacter baumannii 0.9531 1 431
ID Description Score Start End Superfamily
3slhA02 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.9805 22 229 3.65.10.10
3rmtC02 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.9772 22 229 3.65.10.10
af_Q05615_22_211_3.65.10.10 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.9733 21 210 3.65.10.10
af_Q05615_22_211_3.65.10.10 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.9683 21 210 3.65.10.10
3rmtC02 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.968 22 229 3.65.10.10
ID Description Score Start End GO Terms
AF-A0A3C1VST6-F1-model_v4 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.9936 322 417 GO:0003866
GO:0009423
AF-A0A315QZL6-F1-model_v4 3-phosphoshikimate 1-carboxyvinyltransferase 0.9861 13 131 GO:0003866
GO:0009423
AF-A0A3C1PV20-F1-model_v4 Bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase (EC 1.3.1.12, EC 2.5.1.19) 0.9861 21 105 GO:0003866
GO:0008977
GO:0009423
AF-A0A522KIY1-F1-model_v4 deleted 0.9849 8 203
AF-A0A2V5XSA1-F1-model_v4 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.9836 13 201 GO:0003866
GO:0009423

Map