F377636

General Info

Members Datasets Scaffolds Average Seq Length
271 218 542 254

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10003174|Ga0105237_1000317415
Length 286
Sequence MNDPHGCMPPPGGARGSIAAVCEHAGSFISRLAGTMATLSVIPLTGIGEIQPGEDLSATLNAAIQRAGVQLTSHDILVVAQKAVSKAENRYVELTEVSVSPEAARLAEITRKDPRLVQLVLAESSEVLRSKPEVLIVRHKLGYVMANAGIDRSNVGGADRALLLPVDPDGSAARLRTSLAISLGQEIGIVVSDSFGRPWRKGVTNVALGAAGIPALVDRRGESDRNGRKLEVTEVAMADLIASAAGLVMGEGAEGVPAALLQGLSWSAPATRATALLRPLQEDLFR

Samples

Sample ID Description Type Environment
1 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
2 3300001432 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
4 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
5 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
6 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
87 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
88 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
92 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
93 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
94 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
95 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
96 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
97 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
100 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
101 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
104 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
105 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
106 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
107 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
108 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
111 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
114 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
115 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
116 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
117 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
118 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
119 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
120 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
121 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
122 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
123 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
124 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
125 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
126 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
132 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
133 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
136 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
137 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
138 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
141 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
142 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
143 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
144 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
155 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
156 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
157 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
158 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
159 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
162 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
163 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
164 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
165 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
166 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
167 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
168 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
169 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
170 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
171 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
172 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
173 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
174 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
175 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
178 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
179 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
180 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
181 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
182 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
183 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
186 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
187 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
188 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
189 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
190 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
191 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
192 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
193 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
194 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
195 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
196 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
197 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
198 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
199 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
200 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
201 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
202 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
203 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
204 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
205 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
206 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
207 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
208 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
209 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
210 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
211 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
212 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
213 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
214 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
215 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
216 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
217 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
218 2739367865 Novosphingobium sp. GV013 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.89
Metatranscriptomes 0
Isolates 1.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.23
Nodule 0
Rhizoplane 4.43
Rhizosphere 82.29
Stem 0
Stem Tuber 0
Unclassified 4.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105237_10003174 3300009545 Bacteria 19725
2 JGI24034J14986_101828 3300001432 Bacteria 1163
3 JGI24752J21851_1000282 3300001976 Bacteria 7089
4 JGI24748J21848_1000048 3300002074 Bacteria 56138
5 JGI24749J21850_1004351 3300002076 Bacteria 1980
6 JGI24034J26672_10000007 3300002239 Bacteria 224370
7 Ga0065704_10003869 3300005289 Bacteria 4433
8 Ga0070690_100000022 3300005330 Bacteria 72853
9 Ga0070670_100067170 3300005331 Bacteria 3077
10 Ga0070666_10000017 3300005335 Bacteria 190526
11 Ga0070680_100090945 3300005336 Bacteria 2526
12 Ga0070668_100004935 3300005347 Bacteria 9878
13 Ga0070668_100006053 3300005347 Bacteria 8971
14 Ga0070668_100108139 3300005347 Bacteria 2211
15 Ga0070669_100000117 3300005353 Bacteria 74010
16 Ga0070671_100006756 3300005355 Bacteria 9181
17 Ga0070671_100032929 3300005355 Bacteria 4284
18 Ga0070673_100119666 3300005364 Bacteria 2195
19 Ga0070688_100002476 3300005365 Bacteria 9342
20 Ga0070667_100025539 3300005367 Bacteria 4911
21 Ga0070667_100151501 3300005367 Bacteria 2037
22 Ga0070709_10140089 3300005434 Bacteria 1661
23 Ga0070713_100176544 3300005436 Bacteria 1917
24 Ga0070710_10020294 3300005437 Bacteria 3446
25 Ga0070711_100059519 3300005439 Bacteria 2652
26 Ga0070678_100007457 3300005456 Bacteria 6494
27 Ga0070685_10000126 3300005466 Bacteria 48870
28 Ga0070686_100000014 3300005544 Bacteria 166729
29 Ga0070695_100105683 3300005545 Bacteria 1903
30 Ga0070665_100000042 3300005548 Bacteria 292582
31 Ga0070665_100566789 3300005548 Bacteria 1148
32 Ga0068855_100122610 3300005563 Bacteria 2974
33 Ga0068855_100246923 3300005563 Bacteria 1992
34 Ga0068864_100011655 3300005618 Bacteria 7260
35 Ga0068866_10075580 3300005718 Bacteria 1794
36 Ga0068863_100000068 3300005841 Bacteria 117128
37 Ga0068863_100028293 3300005841 Bacteria 5351
38 Ga0068858_100015516 3300005842 Bacteria 7163
39 Ga0068858_100059366 3300005842 Bacteria 3535
40 Ga0068858_100154276 3300005842 Bacteria 2160
41 Ga0068860_100000062 3300005843 Bacteria 190526
42 Ga0068860_100542244 3300005843 Bacteria 1165
43 Ga0068862_100000539 3300005844 Bacteria 39582
44 Ga0081455_10000187 3300005937 Bacteria 78623
45 Ga0070715_10040974 3300006163 Bacteria 1939
46 Ga0070712_100024409 3300006175 Bacteria 4006
47 Ga0068871_100134706 3300006358 Bacteria 2097
48 Ga0075428_100033440 3300006844 Bacteria 5678
49 Ga0075431_100000022 3300006847 Bacteria 81789
50 Ga0075431_100019252 3300006847 Bacteria 6958
51 Ga0075429_100001093 3300006880 Bacteria 21833
52 Ga0068865_100348661 3300006881 Bacteria 1199
53 Ga0105240_10001074 3300009093 Bacteria 48261
54 Ga0105240_10003920 3300009093 Bacteria 22981
55 Ga0105240_10082269 3300009093 Bacteria 3954
56 Ga0105240_10161463 3300009093 Bacteria 2661
57 Ga0105240_10548021 3300009093 Unclassified 1280
58 Ga0111539_10000091 3300009094 Bacteria 94456
59 Ga0111539_10002851 3300009094 Bacteria 22970
60 Ga0105245_10015629 3300009098 Bacteria 6619
61 Ga0105247_10303568 3300009101 Bacteria 1108
62 Ga0114129_10000009 3300009147 Bacteria 149356
63 Ga0114129_10007458 3300009147 Bacteria 15580
64 Ga0114129_10231414 3300009147 Bacteria 2489
65 Ga0105241_10069531 3300009174 Bacteria 2730
66 Ga0105248_10040495 3300009177 Bacteria 5223
67 Ga0105237_10000189 3300009545 Bacteria 87281
68 Ga0105237_10010978 3300009545 Bacteria 9612
69 Ga0105238_10000460 3300009551 Bacteria 42792
70 Ga0105249_10000012 3300009553 Bacteria 292640
71 Ga0105239_10000704 3300010375 Bacteria 47487
72 Ga0105239_10013131 3300010375 Bacteria 9204
73 Ga0157369_10003015 3300013105 Bacteria 20134
74 Ga0157378_10012472 3300013297 Bacteria 7442
75 Ga0163162_10779161 3300013306 Bacteria 1075
76 Ga0163163_10055152 3300014325 Bacteria 3928
77 Ga0157380_10000336 3300014326 Bacteria 28018
78 Ga0157379_10021222 3300014968 Bacteria 5747
79 Ga0163161_10000025 3300017792 Bacteria 201127
80 Ga0207672_1001592 3300025223 Bacteria 1639
81 Ga0207642_10177651 3300025899 Bacteria 1157
82 Ga0207680_10000012 3300025903 Bacteria 293810
83 Ga0207695_10005780 3300025913 Bacteria 16287
84 Ga0207695_10049536 3300025913 Bacteria 4427
85 Ga0207695_10412932 3300025913 Unclassified 1234
86 Ga0207671_10000239 3300025914 Bacteria 82563
87 Ga0207671_10006062 3300025914 Bacteria 10899
88 Ga0207671_10179746 3300025914 Bacteria 1646
89 Ga0207693_10001175 3300025915 Bacteria 23359
90 Ga0207660_10012820 3300025917 Bacteria 5488
91 Ga0207681_10000249 3300025923 Bacteria 41036
92 Ga0207687_10236029 3300025927 Bacteria 1447
93 Ga0207644_10001065 3300025931 Bacteria 17530
94 Ga0207670_10153136 3300025936 Bacteria 1713
95 Ga0207665_10036241 3300025939 Bacteria 3279
96 Ga0207691_10349352 3300025940 Bacteria 1265
97 Ga0207667_10216787 3300025949 Bacteria 1961
98 Ga0207667_10222644 3300025949 Bacteria 1933
99 Ga0207712_10000021 3300025961 Bacteria 292649
100 Ga0207668_10009758 3300025972 Bacteria 5765
101 Ga0207668_10097684 3300025972 Unclassified 2174
102 Ga0207668_10214978 3300025972 Unclassified 1540
103 Ga0207658_10003184 3300025986 Bacteria 11705
104 Ga0207677_10436851 3300026023 Bacteria 1118
105 Ga0207703_10006914 3300026035 Bacteria 9030
106 Ga0207641_10000037 3300026088 Bacteria 206551
107 Ga0207674_10369094 3300026116 Bacteria 1387
108 Ga0207675_100000088 3300026118 Bacteria 71728
109 Ga0207683_10101024 3300026121 Bacteria 2575
110 Ga0207428_10003442 3300027907 Bacteria 15369
111 Ga0268266_10000054 3300028379 Bacteria 292717
112 Ga0268265_10000092 3300028380 Bacteria 114086
113 Ga0268264_10000074 3300028381 Bacteria 259555
114 Ga0268264_10488413 3300028381 Bacteria 1199
115 Ga0307515_10070680 3300028794 Bacteria 4746
116 Ga0265331_10008887 3300031250 Bacteria 5685
117 Ga0265327_10000076 3300031251 Bacteria 212272
118 Ga0265327_10030026 3300031251 Bacteria 3081
119 Ga0307509_10000038 3300031507 Bacteria 188458
120 Ga0307408_100051186 3300031548 Bacteria 2974
121 Ga0307514_10087303 3300031649 Bacteria 2286
122 Ga0307510_10000001 3300033180 Bacteria 1172244
123 Ga0373939_0014430 3300035114 Bacteria 2050
124 Ga0373954_0120053 3300035118 Bacteria 1276
125 Ga0373955_0071021 3300035172 Bacteria 1947
126 Ga0373947_0064118 3300035725 Bacteria 2240
127 Ga0373947_0136155 3300035725 Bacteria 1572
128 Ga0373925_0617145 3300037068 Bacteria 893
129 Ga0395898_0017602 3300037466 Bacteria 7294
130 Ga0395898_0094946 3300037466 Bacteria 2866
131 Ga0436361_0479119 3300039447 Bacteria 1720
132 Ga0436362_0752664 3300039453 Bacteria 1533
133 Ga0439441_053232 3300042001 Bacteria 838
134 Ga0466966_0001005 3300044684 Bacteria 18007
135 Ga0466961_0001080 3300044693 Bacteria 16822
136 Ga0466963_0338148 3300044694 Bacteria 1060
137 Ga0466964_0048580 3300044706 Unclassified 1735
138 Ga0466971_0000227 3300044719 Bacteria 21540
139 Ga0466968_0037053 3300044735 Unclassified 2045
140 Ga0466970_0003603 3300044765 Bacteria 7552
141 Ga0466957_0012237 3300044842 Bacteria 4967
142 Ga0495603_0025041 3300046455 Bacteria 3609
143 Ga0495590_0074358 3300046457 Bacteria 1195
144 Ga0495638_0048162 3300046460 Bacteria 2669
145 Ga0495580_0007173 3300046472 Bacteria 8971
146 Ga0495580_0297435 3300046472 Bacteria 1099
147 Ga0495594_0033355 3300046499 Bacteria 2799
148 Ga0495663_0011677 3300046525 Bacteria 2444
149 Ga0495666_0026272 3300046526 Bacteria 2872
150 Ga0495642_0030179 3300046528 Bacteria 2168
151 Ga0495654_0005177 3300046530 Bacteria 7605
152 Ga0495597_0006713 3300046542 Bacteria 5924
153 Ga0495668_0005660 3300046616 Bacteria 8378
154 Ga0495668_0021225 3300046616 Bacteria 3727
155 Ga0495668_0058818 3300046616 Bacteria 2121
156 Ga0495625_0271902 3300046660 Bacteria 1093
157 Ga0495657_0173247 3300046675 Bacteria 1328
158 Ga0495658_0067957 3300046683 Bacteria 2062
159 Ga0495669_0033816 3300046684 Bacteria 2252
160 Ga0495649_0007448 3300046694 Bacteria 6668
161 Ga0495672_0007105 3300047320 Bacteria 8487
162 Ga0496101_0262511 3300048904 Bacteria 1347
163 Ga0496102_0055379 3300048905 Bacteria 3616
164 Ga0496102_0156825 3300048905 Bacteria 2140
165 Ga0496103_0010079 3300048906 Bacteria 5587
166 Ga0496104_0151739 3300048907 Bacteria 2224
167 Ga0496106_0020343 3300048909 Bacteria 4925
168 Ga0496107_0048414 3300048910 Bacteria 3062
169 Ga0496107_0074870 3300048910 Bacteria 2464
170 Ga0496110_0204763 3300048913 Bacteria 1793
171 Ga0496111_0051978 3300048914 Bacteria 2959
172 Ga0496111_0271564 3300048914 Bacteria 1258
173 Ga0496113_0440978 3300048916 Bacteria 1046
174 Ga0496117_0004416 3300048920 Bacteria 15530
175 Ga0496118_0018430 3300048921 Bacteria 6300
176 Ga0496118_0020190 3300048921 Bacteria 5918
177 Ga0496119_0032740 3300048922 Bacteria 3460
178 Ga0496125_0152918 3300048928 Bacteria 1582
179 Ga0501290_000105 3300049513 Bacteria 12493
180 Ga0501292_000007 3300049515 Bacteria 87287
181 Ga0501297_004195 3300049520 Bacteria 1462
182 Ga0501300_016208 3300049523 Unclassified 1088
183 Ga0501031_0068082 3300049568 Bacteria 2319
184 Ga0501033_0156475 3300049570 Bacteria 1642
185 Ga0501034_0016616 3300049571 Bacteria 7547
186 Ga0501034_0042764 3300049571 Bacteria 4586
187 Ga0501036_0234198 3300049572 Bacteria 1540
188 Ga0501038_0199142 3300049574 Bacteria 1608
189 Ga0501042_0020745 3300049578 Bacteria 4574
190 Ga0501043_0027000 3300049579 Bacteria 4506
191 Ga0501046_0010935 3300049580 Bacteria 7780
192 Ga0501046_0158228 3300049580 Bacteria 1705
193 Ga0501047_0029113 3300049581 Bacteria 5327
194 Ga0501047_0105033 3300049581 Bacteria 2705
195 Ga0501048_0055249 3300049582 Bacteria 2819
196 Ga0501068_0075554 3300049584 Bacteria 2061
197 Ga0501071_0066798 3300049587 Bacteria 2614
198 Ga0501072_0036584 3300049588 Bacteria 3848
199 Ga0501073_0065674 3300049589 Bacteria 2530
200 Ga0501073_0480312 3300049589 Bacteria 859
201 Ga0501074_0021975 3300049590 Bacteria 4633
202 Ga0501075_0071437 3300049591 Bacteria 2623
203 Ga0501075_0114931 3300049591 Bacteria 2046
204 Ga0501076_0009419 3300049592 Bacteria 7211
205 Ga0501202_009947 3300049652 Bacteria 1757
206 Ga0501206_002605 3300049653 Bacteria 2271
207 Ga0501207_002688 3300049654 Bacteria 2321
208 Ga0501222_000253 3300049662 Bacteria 9016
209 Ga0501223_000336 3300049663 Bacteria 11622
210 Ga0501224_000644 3300049664 Bacteria 4307
211 Ga0501227_000292 3300049665 Bacteria 10321
212 Ga0501235_001215 3300049669 Bacteria 5421
213 Ga0501257_000110 3300049686 Bacteria 19204
214 Ga0501259_000011 3300049688 Bacteria 28439
215 Ga0501261_000012 3300049690 Bacteria 47519
216 Ga0501221_001223 3300049704 Bacteria 4257
217 Ga0501225_0011017 3300049705 Bacteria 2549
218 Ga0501245_000409 3300049708 Bacteria 5207
219 Ga0501079_0018750 3300049741 Bacteria 5286
220 Ga0501080_0089387 3300049742 Bacteria 2861
221 Ga0501081_0020927 3300049743 Bacteria 4365
222 Ga0501279_000021 3300049775 Bacteria 56925
223 Ga0501280_000027 3300049776 Bacteria 48598
224 Ga0501280_001821 3300049776 Bacteria 3744
225 Ga0501281_00320 3300049777 Bacteria 4922
226 Ga0501282_000146 3300049778 Bacteria 8503
227 Ga0501283_002065 3300049779 Bacteria 2604
228 Ga0501035_0050814 3300049822 Unclassified 3714
229 Ga0501044_0164464 3300049823 Bacteria 2194
230 Ga0501045_0010574 3300049824 Bacteria 6464
231 nmdc:mga05p37_198358_c1 3300050507 Bacteria 2432
232 nmdc:mga05p37_490696_c1 3300050507 Bacteria 1412
233 nmdc:mga05p37_73782_c1 3300050507 Unclassified 4199
234 nmdc:mga05p37_8_c1 3300050507 Bacteria 153982
235 nmdc:mga09592_2051_c1 3300050508 Bacteria 16247
236 nmdc:mga06r32_425_c1 3300050510 Bacteria 35529
237 nmdc:mga08y16_84_c1 3300050511 Bacteria 79627
238 Ga0500643_000381 3300053087 Bacteria 34648
239 Ga0500644_0180460 3300053088 Bacteria 864
240 Ga0500646_0028603 3300053090 Bacteria 1522
241 Ga0500647_0018276 3300053091 Bacteria 3245
242 Ga0500583_0039765 3300053092 Bacteria 2126
243 Ga0500651_0000506 3300053093 Bacteria 20182
244 Ga0500592_012948 3300053116 Bacteria 1335
245 Ga0500614_021178 3300053123 Bacteria 1507
246 Ga0500617_105830 3300053124 Bacteria 1183
247 Ga0500642_0003524 3300053130 Bacteria 4745
248 Ga0500642_0072565 3300053130 Bacteria 1569
249 Ga0500655_000081 3300053133 Bacteria 25123
250 Ga0500559_0123747 3300053136 Unclassified 1204
251 Ga0500590_000111 3300053148 Bacteria 21950
252 Ga0500622_0010744 3300053156 Bacteria 5011
253 Ga0500627_0001259 3300053158 Bacteria 7007
254 Ga0500627_0040870 3300053158 Bacteria 1991
255 Ga0500627_0119365 3300053158 Unclassified 1189
256 Ga0500639_031556 3300053163 Bacteria 2801
257 Ga0500636_0054461 3300053177 Bacteria 2345
258 Ga0500637_0009168 3300053178 Bacteria 5024
259 Ga0500570_000014 3300053724 Bacteria 52194
260 Ga0500611_000679 3300053727 Bacteria 3474
261 Ga0500625_000007 3300053729 Bacteria 177638
262 Ga0500552_017272 3300053733 Bacteria 986
263 Ga0501084_0296886 3300054114 Bacteria 1364
264 Ga0501082_0170273 3300060353 Bacteria 1893
265 Ga0501082_0392190 3300060353 Bacteria 1211
266 Ga0466962_0002856 3300061719 Bacteria 8230
267 Ga0530510_0053332 3300061734 Bacteria 2922
268 Ga0530510_0113658 3300061734 Bacteria 1984
269 2585263617 2582581305 Bacteria 4895574
270 2739649604 2739367664 Bacteria 4114334
271 2740028077 2739367865 Bacteria 4114482
272 Ga0105237_10003174
273 JGI24034J14986_101828
274 JGI24752J21851_1000282
275 JGI24748J21848_1000048
276 JGI24749J21850_1004351
277 JGI24034J26672_10000007
278 Ga0065704_10003869
279 Ga0070690_100000022
280 Ga0070670_100067170
281 Ga0070666_10000017
282 Ga0070680_100090945
283 Ga0070668_100004935
284 Ga0070668_100006053
285 Ga0070668_100108139
286 Ga0070669_100000117
287 Ga0070671_100006756
288 Ga0070671_100032929
289 Ga0070673_100119666
290 Ga0070688_100002476
291 Ga0070667_100025539
292 Ga0070667_100151501
293 Ga0070709_10140089
294 Ga0070713_100176544
295 Ga0070710_10020294
296 Ga0070711_100059519
297 Ga0070678_100007457
298 Ga0070685_10000126
299 Ga0070686_100000014
300 Ga0070695_100105683
301 Ga0070665_100000042
302 Ga0070665_100566789
303 Ga0068855_100122610
304 Ga0068855_100246923
305 Ga0068864_100011655
306 Ga0068866_10075580
307 Ga0068863_100000068
308 Ga0068863_100028293
309 Ga0068858_100015516
310 Ga0068858_100059366
311 Ga0068858_100154276
312 Ga0068860_100000062
313 Ga0068860_100542244
314 Ga0068862_100000539
315 Ga0081455_10000187
316 Ga0070715_10040974
317 Ga0070712_100024409
318 Ga0068871_100134706
319 Ga0075428_100033440
320 Ga0075431_100000022
321 Ga0075431_100019252
322 Ga0075429_100001093
323 Ga0068865_100348661
324 Ga0105240_10001074
325 Ga0105240_10003920
326 Ga0105240_10082269
327 Ga0105240_10161463
328 Ga0105240_10548021
329 Ga0111539_10000091
330 Ga0111539_10002851
331 Ga0105245_10015629
332 Ga0105247_10303568
333 Ga0114129_10000009
334 Ga0114129_10007458
335 Ga0114129_10231414
336 Ga0105241_10069531
337 Ga0105248_10040495
338 Ga0105237_10000189
339 Ga0105237_10010978
340 Ga0105238_10000460
341 Ga0105249_10000012
342 Ga0105239_10000704
343 Ga0105239_10013131
344 Ga0157369_10003015
345 Ga0157378_10012472
346 Ga0163162_10779161
347 Ga0163163_10055152
348 Ga0157380_10000336
349 Ga0157379_10021222
350 Ga0163161_10000025
351 Ga0207672_1001592
352 Ga0207642_10177651
353 Ga0207680_10000012
354 Ga0207695_10005780
355 Ga0207695_10049536
356 Ga0207695_10412932
357 Ga0207671_10000239
358 Ga0207671_10006062
359 Ga0207671_10179746
360 Ga0207693_10001175
361 Ga0207660_10012820
362 Ga0207681_10000249
363 Ga0207687_10236029
364 Ga0207644_10001065
365 Ga0207670_10153136
366 Ga0207665_10036241
367 Ga0207691_10349352
368 Ga0207667_10216787
369 Ga0207667_10222644
370 Ga0207712_10000021
371 Ga0207668_10009758
372 Ga0207668_10097684
373 Ga0207668_10214978
374 Ga0207658_10003184
375 Ga0207677_10436851
376 Ga0207703_10006914
377 Ga0207641_10000037
378 Ga0207674_10369094
379 Ga0207675_100000088
380 Ga0207683_10101024
381 Ga0207428_10003442
382 Ga0268266_10000054
383 Ga0268265_10000092
384 Ga0268264_10000074
385 Ga0268264_10488413
386 Ga0307515_10070680
387 Ga0265331_10008887
388 Ga0265327_10000076
389 Ga0265327_10030026
390 Ga0307509_10000038
391 Ga0307408_100051186
392 Ga0307514_10087303
393 Ga0307510_10000001
394 Ga0373939_0014430
395 Ga0373954_0120053
396 Ga0373955_0071021
397 Ga0373947_0064118
398 Ga0373947_0136155
399 Ga0373925_0617145
400 Ga0395898_0017602
401 Ga0395898_0094946
402 Ga0436361_0479119
403 Ga0436362_0752664
404 Ga0439441_053232
405 Ga0466966_0001005
406 Ga0466961_0001080
407 Ga0466963_0338148
408 Ga0466964_0048580
409 Ga0466971_0000227
410 Ga0466968_0037053
411 Ga0466970_0003603
412 Ga0466957_0012237
413 Ga0495603_0025041
414 Ga0495590_0074358
415 Ga0495638_0048162
416 Ga0495580_0007173
417 Ga0495580_0297435
418 Ga0495594_0033355
419 Ga0495663_0011677
420 Ga0495666_0026272
421 Ga0495642_0030179
422 Ga0495654_0005177
423 Ga0495597_0006713
424 Ga0495668_0005660
425 Ga0495668_0021225
426 Ga0495668_0058818
427 Ga0495625_0271902
428 Ga0495657_0173247
429 Ga0495658_0067957
430 Ga0495669_0033816
431 Ga0495649_0007448
432 Ga0495672_0007105
433 Ga0496101_0262511
434 Ga0496102_0055379
435 Ga0496102_0156825
436 Ga0496103_0010079
437 Ga0496104_0151739
438 Ga0496106_0020343
439 Ga0496107_0048414
440 Ga0496107_0074870
441 Ga0496110_0204763
442 Ga0496111_0051978
443 Ga0496111_0271564
444 Ga0496113_0440978
445 Ga0496117_0004416
446 Ga0496118_0018430
447 Ga0496118_0020190
448 Ga0496119_0032740
449 Ga0496125_0152918
450 Ga0501290_000105
451 Ga0501292_000007
452 Ga0501297_004195
453 Ga0501300_016208
454 Ga0501031_0068082
455 Ga0501033_0156475
456 Ga0501034_0016616
457 Ga0501034_0042764
458 Ga0501036_0234198
459 Ga0501038_0199142
460 Ga0501042_0020745
461 Ga0501043_0027000
462 Ga0501046_0010935
463 Ga0501046_0158228
464 Ga0501047_0029113
465 Ga0501047_0105033
466 Ga0501048_0055249
467 Ga0501068_0075554
468 Ga0501071_0066798
469 Ga0501072_0036584
470 Ga0501073_0065674
471 Ga0501073_0480312
472 Ga0501074_0021975
473 Ga0501075_0071437
474 Ga0501075_0114931
475 Ga0501076_0009419
476 Ga0501202_009947
477 Ga0501206_002605
478 Ga0501207_002688
479 Ga0501222_000253
480 Ga0501223_000336
481 Ga0501224_000644
482 Ga0501227_000292
483 Ga0501235_001215
484 Ga0501257_000110
485 Ga0501259_000011
486 Ga0501261_000012
487 Ga0501221_001223
488 Ga0501225_0011017
489 Ga0501245_000409
490 Ga0501079_0018750
491 Ga0501080_0089387
492 Ga0501081_0020927
493 Ga0501279_000021
494 Ga0501280_000027
495 Ga0501280_001821
496 Ga0501281_00320
497 Ga0501282_000146
498 Ga0501283_002065
499 Ga0501035_0050814
500 Ga0501044_0164464
501 Ga0501045_0010574
502 nmdc:mga05p37_198358_c1
503 nmdc:mga05p37_490696_c1
504 nmdc:mga05p37_73782_c1
505 nmdc:mga05p37_8_c1
506 nmdc:mga09592_2051_c1
507 nmdc:mga06r32_425_c1
508 nmdc:mga08y16_84_c1
509 Ga0500643_000381
510 Ga0500644_0180460
511 Ga0500646_0028603
512 Ga0500647_0018276
513 Ga0500583_0039765
514 Ga0500651_0000506
515 Ga0500592_012948
516 Ga0500614_021178
517 Ga0500617_105830
518 Ga0500642_0003524
519 Ga0500642_0072565
520 Ga0500655_000081
521 Ga0500559_0123747
522 Ga0500590_000111
523 Ga0500622_0010744
524 Ga0500627_0001259
525 Ga0500627_0040870
526 Ga0500627_0119365
527 Ga0500639_031556
528 Ga0500636_0054461
529 Ga0500637_0009168
530 Ga0500570_000014
531 Ga0500611_000679
532 Ga0500625_000007
533 Ga0500552_017272
534 Ga0501084_0296886
535 Ga0501082_0170273
536 Ga0501082_0392190
537 Ga0466962_0002856
538 Ga0530510_0053332
539 Ga0530510_0113658
540 2585263617
541 2739649604
542 2740028077

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01996

F420_ligase

F420-0:Gamma-glutamyl ligase

46

263

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ule-assembly1.cif.gz_A f420-1/gdp complex of f420-gamma glutamyl ligase (cofe) from archaeoglobus fulgidus 0.9659 1 250
2g9i-assembly1.cif.gz_B crystal structure of homolog of f420-0:gamma-glutamyl ligase from archaeoglobus fulgidus reveals a novel fold. 0.9615 1 250
7ule-assembly1.cif.gz_A f420-1/gdp complex of f420-gamma glutamyl ligase (cofe) from archaeoglobus fulgidus 0.928 1 250
2g9i-assembly1.cif.gz_B crystal structure of homolog of f420-0:gamma-glutamyl ligase from archaeoglobus fulgidus reveals a novel fold. 0.9213 1 250
1ufr-assembly2.cif.gz_D crystal structure of tt1027 from thermus thermophilus hb8 0.7576 133 158
ID Description Score Start End Superfamily
2phnA01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;CofE-like 0.9499 1 235 3.30.1330.100
2phnA01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;CofE-like 0.9323 1 235 3.30.1330.100
2g9iB01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;CofE-like 0.9202 1 237 3.30.1330.100
2g9iB01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;CofE-like 0.9137 1 237 3.30.1330.100
2g9iB02 Alpha Beta;Alpha-Beta Complex;CofE-like fold;CofE-like domain 0.9031 57 131 3.90.1660.10
ID Description Score Start End GO Terms
AF-A0A842N3R2-F1-model_v4 Coenzyme F420-0:L-glutamate ligase 0.9834 128 252 GO:0052618
AF-A0A7C2E5B4-F1-model_v4 Coenzyme F420-0:L-glutamate ligase (EC 6.3.2.31) 0.9804 3 252 GO:0005525
GO:0046872
GO:0052618
AF-A0A4Q3A6X9-F1-model_v4 Coenzyme F420-0:L-glutamate ligase (EC 6.3.2.31) 0.9791 1 216 GO:0005525
GO:0046872
GO:0052618
AF-A0A7C4ZW27-F1-model_v4 Coenzyme F420-0:L-glutamate ligase (EC 6.3.2.31) 0.9783 1 252 GO:0005525
GO:0046872
GO:0052618
AF-A0A1M2Z2X1-F1-model_v4 Coenzyme F420-0:L-glutamate ligase 0.9779 1 252 GO:0005525
GO:0046872
GO:0052618

Map