F377556

General Info

Members Datasets Scaffolds Average Seq Length
271 186 265 576

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10012241|Ga0081538_100122412
Length 629
Sequence MNAGSPKGCESYGDGGLIVAAGLTTGHEVRESRNEGEGGQVIGHYKTWEVCEMQNAETVLGVLRERGRRGLPCNELYRQMFNPQLYLAAYGRIYSNQGAMTPGATGETVDGMSLGKIGRIIDALRHERYRFSPVKRVLIPKKNGKLRPLGLPGWTDKLVGEVMRLLLEAYYEPQFSDRSHGFRVRRGCHTALREVAHTWAGTAWLIEGDISDCFGSLDHEVMLSALSEKIHDHRFLRLVRNMLQAGYLEDWVWNATLSGAPQGGVLSPMLSNIYLHRLDNFAEKVLIPEYNRGVERVKNPAYRKVQKALTRARERGDRAEARLLRKRLRGMPSKDLRDPHYRRLRYVRYADDILLGFAGPKAEAEEIKEKTLITHARTGAARFLGYEITVQHNNKAITNGQRSSNGTVKLRVPTAVIKAKCVPYTQRGKPARRARLMNMDDYTIVSIYGAEYRGVVQYYLLASDVYRLNRLNWVMETSLLKTLAGKHRSTVSKTAAKYKAKVDTPYGPRMCFQAMIERGGGRKPLVARYGGIPLRWQKTAVLQDRQPGRAVGPKELVTRLLAGRCEICERSENVQVHHIRKLADLDKLGQPEKPSWAAIMARRRRKTLVVCQHCHEDIHAGAQVATLTE

Samples

Sample ID Description Type Environment
1 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
48 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
49 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028023 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
76 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
77 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
78 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
79 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
80 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
81 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
85 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
86 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
87 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
90 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
91 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
93 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
94 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
95 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
96 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
97 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
98 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
109 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
110 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
111 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
112 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
113 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
118 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
119 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
120 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
121 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
122 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
123 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
124 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
125 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
126 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
127 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
128 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
129 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
130 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
131 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
132 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
133 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
134 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
137 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
138 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
139 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
140 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
143 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
144 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
145 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
146 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
147 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
152 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
159 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
160 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
161 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
162 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
165 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
169 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
174 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
175 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
176 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
177 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
178 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
179 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
180 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
181 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
182 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
183 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
184 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
185 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
186 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.42
Metatranscriptomes 0.74
Isolates 1.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.69
Nodule 0
Rhizoplane 5.9
Rhizosphere 80.44
Stem 0
Stem Tuber 0
Unclassified 9.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10124445 3300003323 Bacteria 2364
2 Ga0070683_100095420 3300005329 Bacteria 2796
3 Ga0070683_100103389 3300005329 Bacteria 2684
4 Ga0068869_100106207 3300005334 Bacteria 2131
5 Ga0070682_100040081 3300005337 Bacteria 2881
6 Ga0068868_100055974 3300005338 Bacteria 3113
7 Ga0068868_100080068 3300005338 Bacteria 2617
8 Ga0070687_100012257 3300005343 Bacteria 3779
9 Ga0070668_100075852 3300005347 Bacteria 2625
10 Ga0070709_10024555 3300005434 Bacteria 3549
11 Ga0070709_10035601 3300005434 Bacteria 3026
12 Ga0070714_100027001 3300005435 Bacteria 4750
13 Ga0070714_100110975 3300005435 Bacteria 2428
14 Ga0070714_100114025 3300005435 Bacteria 2397
15 Ga0070713_100050890 3300005436 Bacteria 3424
16 Ga0070713_100051709 3300005436 Bacteria 3399
17 Ga0070713_100136838 3300005436 Bacteria 2165
18 Ga0070710_10016384 3300005437 Bacteria 3770
19 Ga0070710_10030560 3300005437 Bacteria 2899
20 Ga0070710_10039260 3300005437 Bacteria 2604
21 Ga0070711_100010048 3300005439 Bacteria 5843
22 Ga0070711_100024790 3300005439 Bacteria 3917
23 Ga0070711_100042333 3300005439 Bacteria 3078
24 Ga0070711_100091213 3300005439 Bacteria 2196
25 Ga0070694_100023379 3300005444 Bacteria 3975
26 Ga0070694_100033739 3300005444 Bacteria 3371
27 Ga0070708_100105558 3300005445 Bacteria 2584
28 Ga0070708_100108007 3300005445 Bacteria 2555
29 Ga0070708_100294705 3300005445 Bacteria 1527
30 Ga0070681_10083979 3300005458 Bacteria 3137
31 Ga0070685_10073480 3300005466 Bacteria 2032
32 Ga0070706_100152069 3300005467 Bacteria 2160
33 Ga0070707_100004979 3300005468 Bacteria 12449
34 Ga0070707_100119505 3300005468 Bacteria 2558
35 Ga0070698_100065684 3300005471 Bacteria 3652
36 Ga0070698_100114440 3300005471 Bacteria 2662
37 Ga0070698_100115560 3300005471 Bacteria 2647
38 Ga0070679_100061896 3300005530 Bacteria 3730
39 Ga0070697_100195557 3300005536 Bacteria 1717
40 Ga0068853_100175262 3300005539 Bacteria 1942
41 Ga0070665_100173263 3300005548 Bacteria 2159
42 Ga0068858_100118325 3300005842 Bacteria 2477
43 Ga0081538_10012241 3300005981 Bacteria 6890
44 Ga0081540_1023937 3300005983 Bacteria 3555
45 Ga0081540_1033824 3300005983 Bacteria 2767
46 Ga0070717_10084188 3300006028 Bacteria 2675
47 Ga0070717_10094878 3300006028 Bacteria 2524
48 Ga0070716_100020365 3300006173 Bacteria 3481
49 Ga0070716_100027642 3300006173 Bacteria 3050
50 Ga0070716_100046791 3300006173 Bacteria 2437
51 Ga0070712_100047655 3300006175 Bacteria 2967
52 Ga0070712_100050426 3300006175 Bacteria 2895
53 Ga0070712_100060276 3300006175 Bacteria 2676
54 Ga0070712_100079395 3300006175 Bacteria 2371
55 Ga0075428_100024313 3300006844 Bacteria 6702
56 Ga0075431_100147459 3300006847 Bacteria 2424
57 Ga0075434_100141232 3300006871 Bacteria 2428
58 Ga0111539_10072094 3300009094 Bacteria 4074
59 Ga0111539_10129512 3300009094 Bacteria 2955
60 Ga0105245_10153125 3300009098 Bacteria 2182
61 Ga0105247_10057402 3300009101 Bacteria 2407
62 Ga0114129_10342555 3300009147 Bacteria 1982
63 Ga0105237_10184525 3300009545 Bacteria 2086
64 Ga0105238_10188077 3300009551 Bacteria 2041
65 Ga0105249_10044256 3300009553 Bacteria 4048
66 Ga0105239_10080878 3300010375 Bacteria 3575
67 Ga0157371_10062478 3300013102 Bacteria 2640
68 Ga0157369_10121770 3300013105 Bacteria 2767
69 Ga0157369_10156926 3300013105 Bacteria 2403
70 Ga0157369_10232650 3300013105 Bacteria 1926
71 Ga0157374_10101073 3300013296 Bacteria 2765
72 Ga0157375_10084784 3300013308 Bacteria 3218
73 Ga0157376_10081975 3300014969 Bacteria 2771
74 Ga0206355_1628000 3300020076 Bacteria 2075
75 Ga0213874_10006733 3300021377 Bacteria 2730
76 Ga0224712_10010469 3300022467 Bacteria 2839
77 Ga0207653_10003993 3300025885 Bacteria 4640
78 Ga0207692_10010818 3300025898 Bacteria 3860
79 Ga0207692_10019253 3300025898 Bacteria 3081
80 Ga0207710_10028956 3300025900 Bacteria 2407
81 Ga0207688_10019960 3300025901 Bacteria 3656
82 Ga0207688_10056663 3300025901 Bacteria 2202
83 Ga0207685_10013262 3300025905 Bacteria 2544
84 Ga0207685_10024012 3300025905 Bacteria 2084
85 Ga0207699_10008778 3300025906 Bacteria 5003
86 Ga0207699_10039270 3300025906 Bacteria 2718
87 Ga0207684_10012234 3300025910 Bacteria 7470
88 Ga0207684_10027280 3300025910 Bacteria 4868
89 Ga0207684_10077641 3300025910 Bacteria 2824
90 Ga0207684_10137006 3300025910 Bacteria 2102
91 Ga0207707_10084782 3300025912 Bacteria 2767
92 Ga0207693_10015995 3300025915 Bacteria 6005
93 Ga0207693_10044689 3300025915 Bacteria 3481
94 Ga0207693_10060560 3300025915 Bacteria 2966
95 Ga0207693_10075301 3300025915 Bacteria 2643
96 Ga0207693_10108794 3300025915 Bacteria 2174
97 Ga0207663_10000860 3300025916 Bacteria 13799
98 Ga0207663_10015563 3300025916 Bacteria 4200
99 Ga0207663_10056490 3300025916 Bacteria 2469
100 Ga0207662_10054841 3300025918 Bacteria 2378
101 Ga0207652_10066924 3300025921 Bacteria 3114
102 Ga0207646_10043147 3300025922 Bacteria 4051
103 Ga0207646_10091295 3300025922 Bacteria 2726
104 Ga0207646_10148134 3300025922 Bacteria 2116
105 Ga0207700_10008711 3300025928 Bacteria 6300
106 Ga0207700_10041986 3300025928 Bacteria 3350
107 Ga0207664_10065643 3300025929 Bacteria 2906
108 Ga0207665_10020611 3300025939 Bacteria 4332
109 Ga0207689_10102066 3300025942 Bacteria 2356
110 Ga0207661_10056954 3300025944 Bacteria 3140
111 Ga0207661_10116147 3300025944 Bacteria 2271
112 Ga0207678_10094959 3300026067 Bacteria 2548
113 Ga0209974_10022733 3300027876 Bacteria 2077
114 Ga0207428_10130069 3300027907 Bacteria 1927
115 Ga0265357_1000272 3300028023 Bacteria 2678
116 Ga0268266_10230100 3300028379 Bacteria 1707
117 Ga0307517_10032099 3300028786 Bacteria 6084
118 Ga0307515_10019328 3300028794 Bacteria 12275
119 Ga0307511_10051991 3300030521 Bacteria 3273
120 Ga0307512_10009343 3300030522 Bacteria 9450
121 Ga0307509_10018990 3300031507 Bacteria 7867
122 Ga0307509_10033000 3300031507 Bacteria 5700
123 Ga0307408_100024061 3300031548 Bacteria 4154
124 Ga0307508_10001984 3300031616 Bacteria 22367
125 Ga0307508_10039628 3300031616 Bacteria 4231
126 Ga0307508_10057746 3300031616 Bacteria 3434
127 Ga0307508_10089932 3300031616 Bacteria 2655
128 Ga0307516_10039965 3300031730 Bacteria 4672
129 Ga0307516_10082050 3300031730 Bacteria 3066
130 Ga0307405_10077405 3300031731 Bacteria 2161
131 Ga0307410_10012123 3300031852 Bacteria 4967
132 Ga0307406_10049965 3300031901 Bacteria 2648
133 Ga0307407_10045629 3300031903 Bacteria 2477
134 Ga0307409_100070641 3300031995 Bacteria 2772
135 Ga0307416_100041560 3300032002 Bacteria 3582
136 Ga0307416_100044250 3300032002 Bacteria 3494
137 Ga0307414_10028956 3300032004 Bacteria 3599
138 Ga0307415_100058126 3300032126 Bacteria 2661
139 Ga0373934_0006440 3300035086 Bacteria 4356
140 Ga0373944_0003917 3300035089 Bacteria 3854
141 Ga0373923_0006287 3300035111 Bacteria 4095
142 Ga0373936_0003650 3300035113 Bacteria 5776
143 Ga0373945_0007748 3300035116 Bacteria 3483
144 Ga0373954_0009242 3300035118 Bacteria 4334
145 Ga0373957_0014230 3300035120 Bacteria 2716
146 Ga0373943_0002325 3300035170 Bacteria 8639
147 Ga0373946_0001127 3300035171 Bacteria 9246
148 Ga0373955_0068522 3300035172 Unclassified 1977
149 Ga0373931_0057405 3300035691 Bacteria 2087
150 Ga0373935_0012560 3300035692 Bacteria 5096
151 Ga0373935_0069785 3300035692 Bacteria 2264
152 Ga0373927_0001070 3300035695 Bacteria 20944
153 Ga0373947_0011288 3300035725 Bacteria 5127
154 Ga0395898_0018748 3300037466 Bacteria 7052
155 Ga0395905_0075194 3300037471 Bacteria 3166
156 Ga0395905_0109631 3300037471 Bacteria 2592
157 Ga0395901_0141009 3300038443 Bacteria 2533
158 Ga0242420_002528 3300038996 Bacteria 2617
159 Ga0436365_0198520 3300039437 Bacteria 2623
160 Ga0436365_1154087 3300039437 Bacteria 5866
161 Ga0436363_0517012 3300039450 Bacteria 2661
162 Ga0436363_0795268 3300039450 Bacteria 13891
163 Ga0436363_1083033 3300039450 Bacteria 2989
164 Ga0451853_0441099 3300041512 Bacteria 3140
165 Ga0466963_0054107 3300044694 Bacteria 2667
166 Ga0466968_0004408 3300044735 Bacteria 5259
167 Ga0466968_0008037 3300044735 Bacteria 4031
168 Ga0466968_0024201 3300044735 Bacteria 2479
169 Ga0466967_0117414 3300045976 Bacteria 2452
170 Ga0495603_0001367 3300046455 Bacteria 14177
171 Ga0495629_0048351 3300046459 Bacteria 2982
172 Ga0495641_0041484 3300046461 Bacteria 2138
173 Ga0495651_0103977 3300046462 Bacteria 2109
174 Ga0495653_0011943 3300046463 Bacteria 7092
175 Ga0495653_0014254 3300046463 Bacteria 6481
176 Ga0495653_0025454 3300046463 Bacteria 4756
177 Ga0495605_0012000 3300046474 Bacteria 4817
178 Ga0495664_0018098 3300046477 Bacteria 4030
179 Ga0495664_0042085 3300046477 Bacteria 2704
180 Ga0495594_0000780 3300046499 Bacteria 16378
181 Ga0495607_0094633 3300046501 Bacteria 1611
182 Ga0495608_0058518 3300046511 Bacteria 2540
183 Ga0495608_0111455 3300046511 Bacteria 1759
184 Ga0495618_0014573 3300046514 Bacteria 4792
185 Ga0495618_0025872 3300046514 Bacteria 3645
186 Ga0495648_0041446 3300046524 Bacteria 2907
187 Ga0495652_0018641 3300046529 Bacteria 6185
188 Ga0495622_0000362 3300046557 Bacteria 31762
189 Ga0495667_0007101 3300046559 Bacteria 7597
190 Ga0495667_0027349 3300046559 Bacteria 3844
191 Ga0495667_0064946 3300046559 Bacteria 2387
192 Ga0495634_0021234 3300046642 Bacteria 4592
193 Ga0495611_0004642 3300046648 Bacteria 5904
194 Ga0495635_0008463 3300046663 Bacteria 7185
195 Ga0495635_0029931 3300046663 Bacteria 3785
196 Ga0495635_0055771 3300046663 Bacteria 2722
197 Ga0495657_0029428 3300046675 Bacteria 3852
198 Ga0495657_0033905 3300046675 Bacteria 3550
199 Ga0495657_0060623 3300046675 Bacteria 2506
200 Ga0495599_0062714 3300046678 Bacteria 2322
201 Ga0495623_0047064 3300046679 Bacteria 2737
202 Ga0495646_0009099 3300046680 Bacteria 6298
203 Ga0495658_0062435 3300046683 Bacteria 2142
204 Ga0495613_0005331 3300046689 Bacteria 9656
205 Ga0495624_0013602 3300046690 Bacteria 5547
206 Ga0495600_0027150 3300046809 Bacteria 3699
207 Ga0495660_0048212 3300046810 Bacteria 2330
208 Ga0495581_0077552 3300047315 Bacteria 1923
209 Ga0495674_0013270 3300047319 Bacteria 7747
210 Ga0495674_0056333 3300047319 Bacteria 3443
211 Ga0495674_0064606 3300047319 Bacteria 3181
212 Ga0495676_0015772 3300047321 Bacteria 6715
213 Ga0495680_0004727 3300047322 Bacteria 12949
214 Ga0495680_0012385 3300047322 Bacteria 7504
215 Ga0495680_0070400 3300047322 Bacteria 2667
216 Ga0495687_001698 3300047443 Bacteria 19584
217 Ga0495687_001725 3300047443 Bacteria 19350
218 Ga0495675_0017652 3300047444 Bacteria 4524
219 Ga0495593_0043397 3300047673 Bacteria 2410
220 Ga0496101_0149421 3300048904 Bacteria 1786
221 Ga0496102_0024565 3300048905 Bacteria 5357
222 Ga0496102_0077087 3300048905 Bacteria 3067
223 Ga0496103_0067787 3300048906 Bacteria 2229
224 Ga0496104_0080919 3300048907 Bacteria 3097
225 Ga0496104_0088012 3300048907 Bacteria 2966
226 Ga0496105_0088162 3300048908 Bacteria 2563
227 Ga0496106_0069729 3300048909 Bacteria 2684
228 Ga0496108_0041331 3300048911 Bacteria 3849
229 Ga0496109_0117319 3300048912 Bacteria 2477
230 Ga0496110_0058430 3300048913 Bacteria 3397
231 Ga0496111_0066641 3300048914 Bacteria 2615
232 Ga0496113_0132407 3300048916 Bacteria 1957
233 Ga0496113_0135936 3300048916 Bacteria 1932
234 Ga0496115_0025127 3300048918 Bacteria 4635
235 Ga0496115_0129041 3300048918 Bacteria 2083
236 Ga0496117_0033431 3300048920 Bacteria 3888
237 Ga0496117_0057479 3300048920 Bacteria 2701
238 Ga0496119_0004590 3300048922 Bacteria 13646
239 Ga0495682_0021672 3300049460 Bacteria 2406
240 Ga0501036_0112488 3300049572 Bacteria 2301
241 Ga0501038_0004886 3300049574 Bacteria 12455
242 Ga0501070_0023549 3300049586 Bacteria 5159
243 Ga0501070_0094186 3300049586 Bacteria 2478
244 Ga0501083_0067823 3300049744 Bacteria 2374
245 Ga0501035_0015817 3300049822 Bacteria 6963
246 Ga0501044_0014348 3300049823 Bacteria 8554
247 nmdc:mga05p37_55965_c1 3300050507 Bacteria 4856
248 nmdc:mga09592_12335_c1 3300050508 Bacteria 6960
249 nmdc:mga06r32_128702_c1 3300050510 Bacteria 2502
250 nmdc:mga08y16_57595_c1 3300050511 Bacteria 4060
251 nmdc:mga0n895_161146_c1 3300050512 Bacteria 2275
252 nmdc:mga08x19_133700_c1 3300050514 Bacteria 1670
253 Ga0495612_0016540 3300053078 Bacteria 2955
254 Ga0495595_0015558 3300053084 Bacteria 3245
255 Ga0495619_0056485 3300053085 Bacteria 2602
256 Ga0500646_0008436 3300053090 Bacteria 2633
257 Ga0500583_0022662 3300053092 Bacteria 2634
258 Ga0500583_0026533 3300053092 Bacteria 2489
259 Ga0500651_0034611 3300053093 Bacteria 3185
260 Ga0500566_0028074 3300053094 Bacteria 3290
261 Ga0500641_0003714 3300053096 Bacteria 5390
262 Ga0500569_002853 3300053109 Bacteria 3457
263 Ga0500594_0006585 3300053118 Bacteria 2614
264 Ga0500652_001678 3300053131 Bacteria 6724
265 Ga0500630_032636 3300053159 Bacteria 2556

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005445 Ga0070708_100294705 Ga0070708_1002947051 451
2 3300046501 Ga0495607_0094633 Ga0495607_0094633_46_1530 478
3 3300046459 Ga0495629_0048351 Ga0495629_0048351_167_1660 483
4 3300053094 Ga0500566_0028074 Ga0500566_0028074_1137_2630 483
5 3300047315 Ga0495581_0077552 Ga0495581_0077552_59_1564 487
6 3300005842 Ga0068858_100118325 Ga0068858_1001183252 490
7 3300046511 Ga0495608_0111455 Ga0495608_0111455_205_1710 494
8 3300050514 nmdc:mga08x19_133700_c1 nmdc:mga08x19_133700_c1_119_1660 502
9 3300044735 Ga0466968_0008037 Ga0466968_0008037_340_2046 504
10 3300045976 Ga0466967_0117414 Ga0466967_0117414_640_2346 504
11 3300005536 Ga0070697_100195557 Ga0070697_1001955571 507
12 3300037471 Ga0395905_0075194 Ga0395905_0075194_252_1826 508
13 3300028379 Ga0268266_10230100 Ga0268266_102301001 515
14 3300039450 Ga0436363_0517012 Ga0436363_0517012_936_2576 518
15 3300025921 Ga0207652_10066924 Ga0207652_100669241 520
16 3300049572 Ga0501036_0112488 Ga0501036_0112488_577_2187 523
17 3300049586 Ga0501070_0023549 Ga0501070_0023549_1949_3559 523
18 3300049822 Ga0501035_0015817 Ga0501035_0015817_4091_5701 523
19 3300049823 Ga0501044_0014348 Ga0501044_0014348_3898_5508 523
20 3300038996 Ga0242420_002528 Ga0242420_002528_137_1897 525
21 3300046559 Ga0495667_0064946 Ga0495667_0064946_206_1966 525
22 3300025885 Ga0207653_10003993 Ga0207653_100039932 528
23 3300005983 Ga0081540_1033824 Ga0081540_10338243 529
24 3300025910 Ga0207684_10012234 Ga0207684_100122341 534
25 3300035086 Ga0373934_0006440 Ga0373934_0006440_2288_4063 536
26 3300035172 Ga0373955_0068522 Ga0373955_0068522_272_1966 537
27 3300047443 Ga0495687_001698 Ga0495687_001698_5808_7610 538
28 3300049460 Ga0495682_0021672 Ga0495682_0021672_50_1867 538
29 3300048916 Ga0496113_0132407 Ga0496113_0132407_12_1706 542
30 3300009094 Ga0111539_10129512 Ga0111539_101295122 543
31 3300031616 Ga0307508_10057746 Ga0307508_100577463 543
32 3300046524 Ga0495648_0041446 Ga0495648_0041446_229_1914 545
33 3300025915 Ga0207693_10108794 Ga0207693_101087942 546
34 3300025922 Ga0207646_10043147 Ga0207646_100431472 546
35 3300005444 Ga0070694_100033739 Ga0070694_1000337392 547
36 3300005444 Ga0070694_100023379 Ga0070694_1000233792 549
37 3300048906 Ga0496103_0067787 Ga0496103_0067787_282_2063 549
38 3300048920 Ga0496117_0033431 Ga0496117_0033431_1545_3326 549
39 3300005436 Ga0070713_100136838 Ga0070713_1001368381 552
40 3300006175 Ga0070712_100079395 Ga0070712_1000793951 552
41 3300027876 Ga0209974_10022733 Ga0209974_100227332 553
42 3300048904 Ga0496101_0149421 Ga0496101_0149421_40_1770 554
43 iso_pu_bacteria 2863404153 2863404764 554
44 iso_pu_bacteria 2863404153 2863409539 554
45 iso_pu_bacteria 2863404153 2863411776 554
46 iso_pu_bacteria 2863404153 2863412401 554
47 3300005343 Ga0070687_100012257 Ga0070687_1000122573 555
48 3300005439 Ga0070711_100024790 Ga0070711_1000247903 555
49 3300005468 Ga0070707_100004979 Ga0070707_10000497911 555
50 3300006175 Ga0070712_100060276 Ga0070712_1000602762 555
51 3300025910 Ga0207684_10077641 Ga0207684_100776411 555
52 3300025916 Ga0207663_10056490 Ga0207663_100564902 555
53 3300025918 Ga0207662_10054841 Ga0207662_100548411 555
54 3300053090 Ga0500646_0008436 Ga0500646_0008436_215_2002 555
55 3300053092 Ga0500583_0026533 Ga0500583_0026533_558_2345 555
56 3300006844 Ga0075428_100024313 Ga0075428_1000243132 556
57 3300037466 Ga0395898_0018748 Ga0395898_0018748_5054_6832 556
58 3300037471 Ga0395905_0109631 Ga0395905_0109631_184_1962 556
59 3300038443 Ga0395901_0141009 Ga0395901_0141009_142_1920 556
60 3300050510 nmdc:mga06r32_128702_c1 nmdc:mga06r32_128702_c1_147_1928 556
61 3300032002 Ga0307416_100044250 Ga0307416_1000442502 559
62 3300025915 Ga0207693_10015995 Ga0207693_100159953 565
63 3300046463 Ga0495653_0011943 Ga0495653_0011943_708_2411 565
64 3300048916 Ga0496113_0135936 Ga0496113_0135936_199_1902 565
65 3300048918 Ga0496115_0129041 Ga0496115_0129041_70_1848 565
66 3300010375 Ga0105239_10080878 Ga0105239_100808782 566
67 3300028023 Ga0265357_1000272 Ga0265357_10002721 566
68 3300031507 Ga0307509_10033000 Ga0307509_100330005 566
69 3300031730 Ga0307516_10082050 Ga0307516_100820502 567
70 3300009147 Ga0114129_10342555 Ga0114129_103425551 568
71 3300050507 nmdc:mga05p37_55965_c1 nmdc:mga05p37_55965_c1_2971_4749 568
72 3300031548 Ga0307408_100024061 Ga0307408_1000240613 570
73 3300031731 Ga0307405_10077405 Ga0307405_100774051 570
74 3300031901 Ga0307406_10049965 Ga0307406_100499652 570
75 3300032002 Ga0307416_100041560 Ga0307416_1000415603 570
76 3300032004 Ga0307414_10028956 Ga0307414_100289562 570
77 3300031852 Ga0307410_10012123 Ga0307410_100121233 571
78 3300031903 Ga0307407_10045629 Ga0307407_100456291 571
79 3300031995 Ga0307409_100070641 Ga0307409_1000706412 571
80 3300032126 Ga0307415_100058126 Ga0307415_1000581262 571
81 3300031616 Ga0307508_10089932 Ga0307508_100899322 573
82 3300005434 Ga0070709_10035601 Ga0070709_100356012 574
83 3300005435 Ga0070714_100114025 Ga0070714_1001140251 574
84 3300005436 Ga0070713_100051709 Ga0070713_1000517092 574
85 3300005437 Ga0070710_10016384 Ga0070710_100163843 574
86 3300005437 Ga0070710_10039260 Ga0070710_100392601 574
87 3300005439 Ga0070711_100010048 Ga0070711_1000100481 574
88 3300005548 Ga0070665_100173263 Ga0070665_1001732632 574
89 3300006173 Ga0070716_100027642 Ga0070716_1000276421 574
90 3300006175 Ga0070712_100047655 Ga0070712_1000476552 574
91 3300006175 Ga0070712_100050426 Ga0070712_1000504262 574
92 3300009098 Ga0105245_10153125 Ga0105245_101531251 574
93 3300009551 Ga0105238_10188077 Ga0105238_101880771 574
94 3300013105 Ga0157369_10121770 Ga0157369_101217701 574
95 3300013296 Ga0157374_10101073 Ga0157374_101010732 574
96 3300014969 Ga0157376_10081975 Ga0157376_100819752 574
97 3300025898 Ga0207692_10010818 Ga0207692_100108182 574
98 3300025898 Ga0207692_10019253 Ga0207692_100192532 574
99 3300025905 Ga0207685_10024012 Ga0207685_100240122 574
100 3300025906 Ga0207699_10039270 Ga0207699_100392701 574
101 3300025915 Ga0207693_10060560 Ga0207693_100605602 574
102 3300025915 Ga0207693_10075301 Ga0207693_100753012 574
103 3300025916 Ga0207663_10015563 Ga0207663_100155632 574
104 3300025928 Ga0207700_10008711 Ga0207700_100087111 574
105 3300025929 Ga0207664_10065643 Ga0207664_100656432 574
106 3300046477 Ga0495664_0042085 Ga0495664_0042085_377_2152 574
107 3300047444 Ga0495675_0017652 Ga0495675_0017652_1906_3681 574
108 3300048905 Ga0496102_0077087 Ga0496102_0077087_555_2345 574
109 3300048907 Ga0496104_0080919 Ga0496104_0080919_244_2034 574
110 3300048909 Ga0496106_0069729 Ga0496106_0069729_80_1870 574
111 3300048911 Ga0496108_0041331 Ga0496108_0041331_609_2399 574
112 3300048912 Ga0496109_0117319 Ga0496109_0117319_132_1922 574
113 3300048913 Ga0496110_0058430 Ga0496110_0058430_1328_3118 574
114 3300048914 Ga0496111_0066641 Ga0496111_0066641_192_1982 574
115 3300053084 Ga0495595_0015558 Ga0495595_0015558_475_2250 574
116 3300005981 Ga0081538_10012241 Ga0081538_100122412 575
117 3300046514 Ga0495618_0025872 Ga0495618_0025872_924_2693 575
118 3300046559 Ga0495667_0027349 Ga0495667_0027349_1673_3520 575
119 3300046663 Ga0495635_0029931 Ga0495635_0029931_1670_3439 575
120 3300047319 Ga0495674_0056333 Ga0495674_0056333_945_2714 575
121 3300005434 Ga0070709_10024555 Ga0070709_100245554 576
122 3300005436 Ga0070713_100050890 Ga0070713_1000508903 576
123 3300005437 Ga0070710_10030560 Ga0070710_100305602 576
124 3300005439 Ga0070711_100042333 Ga0070711_1000423334 576
125 3300006173 Ga0070716_100020365 Ga0070716_1000203651 576
126 3300025905 Ga0207685_10013262 Ga0207685_100132621 576
127 3300025906 Ga0207699_10008778 Ga0207699_100087786 576
128 3300025915 Ga0207693_10044689 Ga0207693_100446891 576
129 3300025916 Ga0207663_10000860 Ga0207663_100008602 576
130 3300025928 Ga0207700_10041986 Ga0207700_100419864 576
131 3300025939 Ga0207665_10020611 Ga0207665_100206112 576
132 3300044735 Ga0466968_0024201 Ga0466968_0024201_289_2073 576
133 3300048907 Ga0496104_0088012 Ga0496104_0088012_952_2751 576
134 3300048908 Ga0496105_0088162 Ga0496105_0088162_209_2014 576
135 3300048918 Ga0496115_0025127 Ga0496115_0025127_1112_2911 576
136 3300046455 Ga0495603_0001367 Ga0495603_0001367_8531_10315 577
137 3300046499 Ga0495594_0000780 Ga0495594_0000780_8522_10306 577
138 3300046557 Ga0495622_0000362 Ga0495622_0000362_29472_31256 577
139 3300046648 Ga0495611_0004642 Ga0495611_0004642_2832_4616 577
140 3300046810 Ga0495660_0048212 Ga0495660_0048212_416_2200 577
141 3300047443 Ga0495687_001725 Ga0495687_001725_16751_18535 577
142 3300005445 Ga0070708_100108007 Ga0070708_1001080072 579
143 3300005467 Ga0070706_100152069 Ga0070706_1001520692 579
144 3300005471 Ga0070698_100115560 Ga0070698_1001155601 579
145 3300005530 Ga0070679_100061896 Ga0070679_1000618963 579
146 3300005539 Ga0068853_100175262 Ga0068853_1001752621 579
147 3300013102 Ga0157371_10062478 Ga0157371_100624782 579
148 3300013105 Ga0157369_10232650 Ga0157369_102326501 579
149 3300025910 Ga0207684_10137006 Ga0207684_101370061 579
150 3300025922 Ga0207646_10148134 Ga0207646_101481341 579
151 3300026067 Ga0207678_10094959 Ga0207678_100949592 579
152 3300046463 Ga0495653_0025454 Ga0495653_0025454_976_2751 579
153 3300046679 Ga0495623_0047064 Ga0495623_0047064_395_2170 579
154 3300046680 Ga0495646_0009099 Ga0495646_0009099_3877_5652 579
155 3300053078 Ga0495612_0016540 Ga0495612_0016540_444_2219 579
156 3300005439 Ga0070711_100091213 Ga0070711_1000912132 580
157 3300035691 Ga0373931_0057405 Ga0373931_0057405_87_1862 580
158 3300044694 Ga0466963_0054107 Ga0466963_0054107_449_2224 580
159 3300005329 Ga0070683_100103389 Ga0070683_1001033892 582
160 3300025901 Ga0207688_10056663 Ga0207688_100566631 582
161 3300025944 Ga0207661_10056954 Ga0207661_100569541 582
162 3300005468 Ga0070707_100119505 Ga0070707_1001195052 583
163 3300009545 Ga0105237_10184525 Ga0105237_101845251 583
164 3300025922 Ga0207646_10091295 Ga0207646_100912951 583
165 3300005334 Ga0068869_100106207 Ga0068869_1001062071 584
166 3300005458 Ga0070681_10083979 Ga0070681_100839793 584
167 3300005471 Ga0070698_100065684 Ga0070698_1000656842 584
168 3300025912 Ga0207707_10084782 Ga0207707_100847821 584
169 3300031616 Ga0307508_10039628 Ga0307508_100396282 584
170 3300041512 Ga0451853_0441099 Ga0451853_0441099_873_2675 584
171 3300046675 Ga0495657_0029428 Ga0495657_0029428_878_2680 584
172 3300046689 Ga0495613_0005331 Ga0495613_0005331_7762_9564 584
173 3300047322 Ga0495680_0004727 Ga0495680_0004727_9016_10818 584
174 iso_pu_bacteria 8048127548 8048129918 584
175 3300049744 Ga0501083_0067823 Ga0501083_0067823_114_1871 585
176 3300005338 Ga0068868_100080068 Ga0068868_1000800681 586
177 3300009101 Ga0105247_10057402 Ga0105247_100574021 586
178 3300025900 Ga0207710_10028956 Ga0207710_100289562 586
179 3300046511 Ga0495608_0058518 Ga0495608_0058518_513_2288 586
180 3300005329 Ga0070683_100095420 Ga0070683_1000954201 587
181 3300006871 Ga0075434_100141232 Ga0075434_1001412321 587
182 3300025944 Ga0207661_10116147 Ga0207661_101161471 587
183 3300046663 Ga0495635_0055771 Ga0495635_0055771_784_2574 587
184 3300046675 Ga0495657_0060623 Ga0495657_0060623_492_2282 587
185 3300047319 Ga0495674_0064606 Ga0495674_0064606_1122_2912 587
186 3300047322 Ga0495680_0070400 Ga0495680_0070400_644_2434 587
187 3300048905 Ga0496102_0024565 Ga0496102_0024565_58_1824 587
188 3300048920 Ga0496117_0057479 Ga0496117_0057479_917_2683 587
189 3300048922 Ga0496119_0004590 Ga0496119_0004590_6721_8487 587
190 3300050512 nmdc:mga0n895_161146_c1 nmdc:mga0n895_161146_c1_42_1841 587
191 3300005347 Ga0070668_100075852 Ga0070668_1000758521 588
192 3300005445 Ga0070708_100105558 Ga0070708_1001055581 588
193 3300005471 Ga0070698_100114440 Ga0070698_1001144401 588
194 3300009553 Ga0105249_10044256 Ga0105249_100442563 588
195 3300025910 Ga0207684_10027280 Ga0207684_100272802 588
196 3300053085 Ga0495619_0056485 Ga0495619_0056485_217_2010 590
197 3300035120 Ga0373957_0014230 Ga0373957_0014230_200_1975 591
198 3300006028 Ga0070717_10084188 Ga0070717_100841883 592
199 3300006173 Ga0070716_100046791 Ga0070716_1000467911 592
200 3300030521 Ga0307511_10051991 Ga0307511_100519911 592
201 3300031616 Ga0307508_10001984 Ga0307508_100019845 592
202 3300035089 Ga0373944_0003917 Ga0373944_0003917_229_2028 592
203 3300035111 Ga0373923_0006287 Ga0373923_0006287_2158_3957 592
204 3300035113 Ga0373936_0003650 Ga0373936_0003650_232_2031 592
205 3300035116 Ga0373945_0007748 Ga0373945_0007748_1482_3281 592
206 3300035170 Ga0373943_0002325 Ga0373943_0002325_5519_7318 592
207 3300035171 Ga0373946_0001127 Ga0373946_0001127_7299_9098 592
208 3300035695 Ga0373927_0001070 Ga0373927_0001070_18477_20276 592
209 3300035725 Ga0373947_0011288 Ga0373947_0011288_152_1951 592
210 3300039437 Ga0436365_1154087 Ga0436365_1154087_378_2168 592
211 3300039450 Ga0436363_1083033 Ga0436363_1083033_838_2622 592
212 3300044735 Ga0466968_0004408 Ga0466968_0004408_1721_3499 592
213 3300046461 Ga0495641_0041484 Ga0495641_0041484_230_2029 592
214 3300046462 Ga0495651_0103977 Ga0495651_0103977_187_1986 592
215 3300046463 Ga0495653_0014254 Ga0495653_0014254_3490_5289 592
216 3300046477 Ga0495664_0018098 Ga0495664_0018098_2077_3876 592
217 3300046514 Ga0495618_0014573 Ga0495618_0014573_784_2583 592
218 3300046529 Ga0495652_0018641 Ga0495652_0018641_3774_5573 592
219 3300046559 Ga0495667_0007101 Ga0495667_0007101_3804_5603 592
220 3300046642 Ga0495634_0021234 Ga0495634_0021234_1922_3721 592
221 3300046663 Ga0495635_0008463 Ga0495635_0008463_1942_3741 592
222 3300046675 Ga0495657_0033905 Ga0495657_0033905_418_2217 592
223 3300046678 Ga0495599_0062714 Ga0495599_0062714_440_2239 592
224 3300046683 Ga0495658_0062435 Ga0495658_0062435_249_2048 592
225 3300046690 Ga0495624_0013602 Ga0495624_0013602_3497_5296 592
226 3300046809 Ga0495600_0027150 Ga0495600_0027150_1470_3269 592
227 3300047319 Ga0495674_0013270 Ga0495674_0013270_4788_6587 592
228 3300047321 Ga0495676_0015772 Ga0495676_0015772_4452_6251 592
229 3300047322 Ga0495680_0012385 Ga0495680_0012385_422_2221 592
230 3300047673 Ga0495593_0043397 Ga0495593_0043397_244_2043 592
231 3300049586 Ga0501070_0094186 Ga0501070_0094186_437_2239 592
232 3300005337 Ga0070682_100040081 Ga0070682_1000400814 593
233 3300005338 Ga0068868_100055974 Ga0068868_1000559741 593
234 3300005435 Ga0070714_100027001 Ga0070714_1000270013 593
235 3300005435 Ga0070714_100110975 Ga0070714_1001109752 593
236 3300005466 Ga0070685_10073480 Ga0070685_100734801 593
237 3300005983 Ga0081540_1023937 Ga0081540_10239373 593
238 3300006028 Ga0070717_10094878 Ga0070717_100948782 593
239 3300006847 Ga0075431_100147459 Ga0075431_1001474591 593
240 3300009094 Ga0111539_10072094 Ga0111539_100720941 593
241 3300013105 Ga0157369_10156926 Ga0157369_101569262 593
242 3300013308 Ga0157375_10084784 Ga0157375_100847842 593
243 3300020076 Ga0206355_1628000 Ga0206355_16280001 593
244 3300021377 Ga0213874_10006733 Ga0213874_100067332 593
245 3300022467 Ga0224712_10010469 Ga0224712_100104692 593
246 3300025901 Ga0207688_10019960 Ga0207688_100199603 593
247 3300025910 Ga0207684_10027280 Ga0207684_100272801 593
248 3300027907 Ga0207428_10130069 Ga0207428_101300691 593
249 3300031507 Ga0307509_10018990 Ga0307509_100189901 593
250 3300031730 Ga0307516_10039965 Ga0307516_100399654 593
251 3300035118 Ga0373954_0009242 Ga0373954_0009242_141_1925 593
252 3300035692 Ga0373935_0069785 Ga0373935_0069785_204_1988 593
253 3300039437 Ga0436365_0198520 Ga0436365_0198520_272_2056 593
254 3300039450 Ga0436363_0795268 Ga0436363_0795268_10415_12199 593
255 3300049574 Ga0501038_0004886 Ga0501038_0004886_206_2029 593
256 3300050508 nmdc:mga09592_12335_c1 nmdc:mga09592_12335_c1_3882_5663 593
257 3300050511 nmdc:mga08y16_57595_c1 nmdc:mga08y16_57595_c1_179_1960 593
258 3300053092 Ga0500583_0022662 Ga0500583_0022662_249_2030 593
259 3300046474 Ga0495605_0012000 Ga0495605_0012000_1225_3015 594
260 3300025942 Ga0207689_10102066 Ga0207689_101020661 595
261 3300028786 Ga0307517_10032099 Ga0307517_100320994 595
262 3300028794 Ga0307515_10019328 Ga0307515_100193282 595
263 3300030522 Ga0307512_10009343 Ga0307512_100093431 595
264 3300053093 Ga0500651_0034611 Ga0500651_0034611_783_2570 595
265 3300053096 Ga0500641_0003714 Ga0500641_0003714_2453_4240 595
266 3300053109 Ga0500569_002853 Ga0500569_002853_311_2098 595
267 3300053118 Ga0500594_0006585 Ga0500594_0006585_652_2439 595
268 3300053131 Ga0500652_001678 Ga0500652_001678_1153_2940 595
269 3300053159 Ga0500630_032636 Ga0500630_032636_514_2301 595
270 3300003323 rootH1_10124445 rootH1_101244451 596
271 3300035692 Ga0373935_0012560 Ga0373935_0012560_2032_3822 596

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01348

Intron_maturas2

Type II intron maturase

411

507

0.92

PF00078

RVT_1

Reverse transcriptase (RNA-dependent DNA polymerase)

139

310

0.89

PF21368

AI2M-like_HNH

AI2M/AI1M-like, HNH endonuclease

565

615

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ovn-assembly1.cif.gz_A crystal structure of fiv reverse transcriptase 0.8411 293 355
8h2h-assembly1.cif.gz_D cryo-em structure of a group ii intron complexed with its reverse transcriptase 0.8386 1 587
8bgj-assembly2.cif.gz_B crystal structure of reverse transcriptase domain from caloramator australicus cart-capp 0.8361 108 353
8t2r-assembly1.cif.gz_D structure of a group ii intron ribonucleoprotein in the pre-ligation (pre-2f) state 0.8355 22 452
7uin-assembly1.cif.gz_D cryoem structure of an group ii intron retroelement 0.8353 24 454
ID Description Score Start End Superfamily
af_P05511_299_561_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8349 87 349 3.20.20.210
af_P05511_299_561_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8289 87 349 3.20.20.210
af_Q47688_90_332_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.7296 86 341 3.30.70.270
af_Q47688_90_332_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.7079 86 341 3.30.70.270
af_Q54BA4_491_738_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.7041 87 340 3.30.70.270
ID Description Score Start End GO Terms
AF-A0A543DP06-F1-model_v4 Reverse transcriptase (RNA-dependent DNA polymerase) 0.952 1 126
AF-A0A828EVD2-F1-model_v4 deleted 0.948 1 181
AF-A0A828EVD2-F1-model_v4 deleted 0.943 1 181
AF-A0A6G1ZLZ4-F1-model_v4 Maturase 0.9351 1 190
AF-A0A446GNJ1-F1-model_v4 Group II intron-encoded protein ltrA 0.9331 5 148

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pLDDT pTM Quality
84.31 0.8 High
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Predicted Structure (AlphaFold2)

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