F377546

General Info

Members Datasets Scaffolds Average Seq Length
271 175 267 449

Family's Representative Sequence

Representative Sequence 3300005842|Ga0068858_100000773|Ga0068858_10000077310
Length 518
Sequence MMRRIRSLPLFSFFSLFSFPSEGWGPVGKASRLIAGVHPTGPSIGLNMPRMFKDRPGDDPTRCSSLGKKGVLGLGLALIMSACTVGPNYVKPTPPPVDTSSFAETARTAAVAPTPLPDHWWQLYNDPALDRLVTEALAHNTDIRTAAANLARARAVLSEQRGARLPTTDLNASYTRSRTAAGQSPTGQAFESDFFSVGFDASYEVDLFGGVTRAIQAARGDTEAAAAEVAMETVGLQQKTLDLTNTLFTAGRGTRRDVQRADVLLANTQAQIPGFEAERRAALYALATLTGRPPEQIDADADRCTTPPRVSVTVPIGDGAALLARRPDVRAAERTLAADTARVGVATADLYPSIKLLGSLGFGANKVGDVFKGPSFSWSLGPLISWNFPNQTVARARVRQARAGADASLARFDGTVLTALKEVEQALARYAGALDRNAALRRAEAASTEAARLSRLRFDYGADSFLLLIEAERDRADARAALAQSDAAVADAQVSLFKALGGGWQGAAMPERRDPVAP

Samples

Sample ID Description Type Environment
1 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
2 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
3 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
4 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere
5 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
6 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
7 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
8 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
9 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
10 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
11 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
12 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
13 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
16 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
17 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
18 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
63 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
97 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
100 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
101 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
104 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
105 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
106 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
110 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
111 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
114 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
115 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
116 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
117 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
118 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
119 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
120 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
124 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
125 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
126 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
129 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
130 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
131 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
132 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
133 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
134 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
135 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
136 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
137 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
138 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
139 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
140 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
143 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
144 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
145 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
146 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
147 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
148 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
149 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
150 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
151 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
155 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
158 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
159 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
160 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
161 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
162 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
163 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
164 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
165 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
166 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
167 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
168 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
169 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
170 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
171 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
172 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
173 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
174 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
175 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.52
Metatranscriptomes 0
Isolates 1.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.86
Nodule 0
Rhizoplane 2.21
Rhizosphere 73.06
Stem 0
Stem Tuber 0
Unclassified 15.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1000010 3300001904 Bacteria 34670
2 JGI24741J21665_1001703 3300001915 Bacteria 6078
3 JGI24740J21852_10003095 3300001979 Bacteria 7339
4 JGI24740J21852_10012907 3300001979 Bacteria 3137
5 JGI24739J22299_10003656 3300001989 Bacteria 5872
6 JGI24737J22298_10004328 3300001990 Bacteria 4955
7 JGI24735J21928_10008013 3300002067 Bacteria 3430
8 JGI24738J21930_10001036 3300002075 Bacteria 7921
9 JGI24744J21845_10003552 3300002077 Bacteria 3210
10 JGI25165J46597_1000024 3300003214 Bacteria 335150
11 rootH1_10111426 3300003323 Bacteria 5076
12 Ga0055525_1000058 3300003759 Bacteria 210367
13 Ga0065704_10073631 3300005289 Bacteria 6926
14 Ga0070658_10083351 3300005327 Bacteria 2628
15 Ga0070676_10000010 3300005328 Bacteria 59583
16 Ga0070670_100000209 3300005331 Bacteria 54253
17 Ga0070670_100004804 3300005331 Bacteria 11346
18 Ga0070666_10007963 3300005335 Bacteria 6552
19 Ga0070661_100029757 3300005344 Bacteria 3943
20 Ga0070668_100000112 3300005347 Bacteria 50544
21 Ga0070668_100007149 3300005347 Bacteria 8275
22 Ga0070669_100003070 3300005353 Bacteria 12010
23 Ga0070669_100027528 3300005353 Bacteria 4091
24 Ga0070674_100064925 3300005356 Bacteria 2560
25 Ga0070667_100000058 3300005367 Bacteria 148071
26 Ga0070667_100000127 3300005367 Bacteria 95853
27 Ga0070663_100014087 3300005455 Bacteria 5124
28 Ga0070662_100065568 3300005457 Bacteria 2662
29 Ga0068855_100000023 3300005563 Bacteria 190440
30 Ga0068855_100001110 3300005563 Bacteria 33477
31 Ga0068855_100063595 3300005563 Bacteria 4306
32 Ga0068855_100282946 3300005563 Unclassified 1841
33 Ga0070664_100092619 3300005564 Bacteria 2617
34 Ga0070664_100124569 3300005564 Bacteria 2259
35 Ga0068857_100005551 3300005577 Bacteria 10763
36 Ga0068854_100000103 3300005578 Bacteria 59186
37 Ga0068854_100029784 3300005578 Bacteria 3782
38 Ga0068856_100085764 3300005614 Bacteria 3128
39 Ga0068859_100011466 3300005617 Bacteria 8911
40 Ga0068864_100000062 3300005618 Bacteria 121206
41 Ga0068864_100000111 3300005618 Bacteria 79723
42 Ga0068861_100004199 3300005719 Bacteria 9661
43 Ga0068851_10025050 3300005834 Bacteria 2924
44 Ga0068863_100000031 3300005841 Bacteria 175602
45 Ga0068863_100000064 3300005841 Bacteria 118153
46 Ga0068863_100040470 3300005841 Bacteria 4432
47 Ga0068858_100000022 3300005842 Bacteria 169718
48 Ga0068858_100000773 3300005842 Bacteria 33380
49 Ga0068860_100015407 3300005843 Bacteria 7469
50 Ga0068862_100000079 3300005844 Bacteria 113551
51 Ga0068862_100005605 3300005844 Bacteria 10492
52 Ga0081455_10023017 3300005937 Bacteria 5807
53 Ga0097621_100026725 3300006237 Bacteria 4531
54 Ga0068871_100127744 3300006358 Bacteria 2153
55 Ga0097620_100011466 3300006931 Bacteria 8911
56 Ga0105251_10000625 3300009011 Bacteria 32540
57 Ga0105240_10014035 3300009093 Bacteria 10957
58 Ga0105240_10018726 3300009093 Bacteria 9276
59 Ga0105240_10045761 3300009093 Bacteria 5550
60 Ga0105240_10045874 3300009093 Bacteria 5541
61 Ga0105240_10059040 3300009093 Bacteria 4788
62 Ga0105247_10013431 3300009101 Bacteria 4911
63 Ga0105241_10015301 3300009174 Bacteria 5618
64 Ga0105248_10000014 3300009177 Bacteria 324729
65 Ga0105248_10000765 3300009177 Bacteria 36076
66 Ga0105248_10005124 3300009177 Bacteria 14461
67 Ga0105237_10004002 3300009545 Bacteria 17230
68 Ga0105237_10037149 3300009545 Bacteria 4925
69 Ga0105238_10129019 3300009551 Bacteria 2507
70 Ga0105249_10001836 3300009553 Bacteria 18458
71 Ga0105249_10040519 3300009553 Bacteria 4231
72 Ga0105148_100229 3300009978 Bacteria 7965
73 Ga0105239_10001121 3300010375 Bacteria 36892
74 Ga0105239_10051290 3300010375 Bacteria 4523
75 Ga0105239_10138017 3300010375 Bacteria 2715
76 Ga0157373_10018488 3300013100 Bacteria 5073
77 Ga0157373_10064437 3300013100 Bacteria 2594
78 Ga0157370_10023950 3300013104 Bacteria 6053
79 Ga0157369_10065914 3300013105 Bacteria 3897
80 Ga0163162_10005179 3300013306 Bacteria 12576
81 Ga0163162_10120572 3300013306 Bacteria 2727
82 Ga0163162_10211987 3300013306 Bacteria 2067
83 Ga0157380_10000280 3300014326 Bacteria 30637
84 Ga0163161_10010927 3300017792 Bacteria 6292
85 Ga0163161_10014999 3300017792 Bacteria 5399
86 Ga0209563_100024 3300025230 Bacteria 601155
87 Ga0209233_1000084 3300025261 Bacteria 335222
88 Ga0207697_10009225 3300025315 Bacteria 4270
89 Ga0207713_1011291 3300025735 Bacteria 4869
90 Ga0207710_10006955 3300025900 Bacteria 4811
91 Ga0207680_10005248 3300025903 Bacteria 6180
92 Ga0207647_10000205 3300025904 Bacteria 48382
93 Ga0207647_10010515 3300025904 Bacteria 6533
94 Ga0207705_10130319 3300025909 Bacteria 1871
95 Ga0207654_10004681 3300025911 Bacteria 6923
96 Ga0207695_10010258 3300025913 Bacteria 11481
97 Ga0207695_10016409 3300025913 Bacteria 8665
98 Ga0207695_10026617 3300025913 Bacteria 6454
99 Ga0207695_10152256 3300025913 Bacteria 2251
100 Ga0207671_10001304 3300025914 Bacteria 29270
101 Ga0207671_10005808 3300025914 Bacteria 11222
102 Ga0207671_10033112 3300025914 Bacteria 3846
103 Ga0207657_10011115 3300025919 Bacteria 8950
104 Ga0207681_10003078 3300025923 Bacteria 10482
105 Ga0207681_10026050 3300025923 Bacteria 3769
106 Ga0207694_10002672 3300025924 Bacteria 14432
107 Ga0207694_10043708 3300025924 Bacteria 3458
108 Ga0207650_10000367 3300025925 Bacteria 42933
109 Ga0207650_10098233 3300025925 Bacteria 2249
110 Ga0207644_10017436 3300025931 Bacteria 4848
111 Ga0207706_10001437 3300025933 Bacteria 23842
112 Ga0207706_10007899 3300025933 Bacteria 9819
113 Ga0207669_10055976 3300025937 Bacteria 2392
114 Ga0207711_10000021 3300025941 Bacteria 355952
115 Ga0207711_10000556 3300025941 Bacteria 37964
116 Ga0207711_10009889 3300025941 Bacteria 7932
117 Ga0207679_10036154 3300025945 Bacteria 3501
118 Ga0207667_10010753 3300025949 Bacteria 10673
119 Ga0207712_10001145 3300025961 Bacteria 18468
120 Ga0207668_10000038 3300025972 Bacteria 112486
121 Ga0207668_10009388 3300025972 Bacteria 5861
122 Ga0207640_10000332 3300025981 Bacteria 31426
123 Ga0207640_10022560 3300025981 Bacteria 3770
124 Ga0207658_10000037 3300025986 Bacteria 148087
125 Ga0207658_10000424 3300025986 Bacteria 40038
126 Ga0207658_10041159 3300025986 Bacteria 3344
127 Ga0207703_10000048 3300026035 Bacteria 151143
128 Ga0207703_10001317 3300026035 Bacteria 22825
129 Ga0207639_10000272 3300026041 Bacteria 37069
130 Ga0207639_10000311 3300026041 Bacteria 34425
131 Ga0207639_10000567 3300026041 Bacteria 25468
132 Ga0207678_10000007 3300026067 Bacteria 179943
133 Ga0207702_10009619 3300026078 Bacteria 8113
134 Ga0207702_10077794 3300026078 Bacteria 2870
135 Ga0207641_10000050 3300026088 Bacteria 175954
136 Ga0207641_10000107 3300026088 Bacteria 121220
137 Ga0207676_10000057 3300026095 Bacteria 121220
138 Ga0207676_10000270 3300026095 Bacteria 44974
139 Ga0207674_10009249 3300026116 Bacteria 11296
140 Ga0207674_10023824 3300026116 Bacteria 6550
141 Ga0207698_10105165 3300026142 Bacteria 2351
142 Ga0268265_10000080 3300028380 Bacteria 121220
143 Ga0268265_10006848 3300028380 Bacteria 7712
144 Ga0268264_10011081 3300028381 Bacteria 7447
145 Ga0307517_10027590 3300028786 Bacteria 6811
146 Ga0307517_10030898 3300028786 Bacteria 6258
147 Ga0307517_10129477 3300028786 Bacteria 1824
148 Ga0307513_10193647 3300031456 Bacteria 1882
149 Ga0307412_10039616 3300031911 Bacteria 3043
150 Ga0307510_10001520 3300033180 Bacteria 25575
151 Ga0307510_10184586 3300033180 Bacteria 1643
152 Ga0395898_0131583 3300037466 Unclassified 2396
153 Ga0395905_0011113 3300037471 Bacteria 8707
154 Ga0395901_0056056 3300038443 Bacteria 4099
155 Ga0439448_0000578 3300042005 Bacteria 8603
156 Ga0466963_0005193 3300044694 Bacteria 7600
157 Ga0466964_0009430 3300044706 Bacteria 3676
158 Ga0466971_0001721 3300044719 Bacteria 9275
159 Ga0466957_0036439 3300044842 Bacteria 2957
160 Ga0451576_0000024 3300045051 Bacteria 470499
161 Ga0466958_0004781 3300045836 Bacteria 7203
162 Ga0495617_017122 3300046452 Bacteria 2447
163 Ga0495627_000148 3300046453 Bacteria 84235
164 Ga0495638_0000051 3300046460 Bacteria 206003
165 Ga0495638_0000149 3300046460 Bacteria 110150
166 Ga0495638_0000204 3300046460 Bacteria 84182
167 Ga0495650_0000172 3300046471 Bacteria 142776
168 Ga0495650_0000325 3300046471 Bacteria 85327
169 Ga0495650_0001681 3300046471 Bacteria 20431
170 Ga0495585_0019659 3300046492 Bacteria 3892
171 Ga0495607_0009189 3300046501 Bacteria 6717
172 Ga0495583_0000498 3300046506 Bacteria 56923
173 Ga0495583_0001578 3300046506 Bacteria 22496
174 Ga0495583_0010365 3300046506 Bacteria 5442
175 Ga0495606_0032903 3300046507 Bacteria 3585
176 Ga0495610_0000034 3300046512 Bacteria 201408
177 Ga0495616_0000032 3300046513 Bacteria 130692
178 Ga0495632_0000511 3300046519 Bacteria 36529
179 Ga0495632_0004072 3300046519 Bacteria 10090
180 Ga0495643_0003184 3300046522 Bacteria 12192
181 Ga0495648_0000032 3300046524 Bacteria 205970
182 Ga0495654_0000825 3300046530 Bacteria 23522
183 Ga0495609_0008218 3300046538 Bacteria 5122
184 Ga0495597_0043866 3300046542 Bacteria 1990
185 Ga0495633_0048051 3300046558 Bacteria 2016
186 Ga0495668_0004361 3300046616 Bacteria 10097
187 Ga0495668_0024203 3300046616 Bacteria 3455
188 Ga0495625_0000083 3300046660 Bacteria 152144
189 Ga0495625_0008466 3300046660 Bacteria 8777
190 Ga0495625_0022396 3300046660 Bacteria 4844
191 Ga0495669_0018221 3300046684 Bacteria 3017
192 Ga0495670_0024371 3300046691 Bacteria 2990
193 Ga0495671_0000020 3300046692 Bacteria 268306
194 Ga0495671_0007765 3300046692 Bacteria 6078
195 Ga0495677_0003286 3300047445 Bacteria 6304
196 Ga0495673_0000076 3300047469 Bacteria 205985
197 Ga0495681_0000037 3300047470 Bacteria 122686
198 Ga0495686_0000733 3300047472 Bacteria 43762
199 Ga0495686_0001733 3300047472 Bacteria 22411
200 Ga0495615_0000046 3300048090 Bacteria 41047
201 Ga0496102_0000010 3300048905 Bacteria 324617
202 Ga0496103_0000029 3300048906 Bacteria 213326
203 Ga0496108_0008206 3300048911 Bacteria 8475
204 Ga0496108_0012103 3300048911 Bacteria 7014
205 Ga0496109_0072107 3300048912 Bacteria 3172
206 Ga0496110_0084724 3300048913 Bacteria 2829
207 Ga0496116_0000942 3300048919 Bacteria 35835
208 Ga0496116_0034485 3300048919 Bacteria 3570
209 Ga0496116_0065888 3300048919 Bacteria 2321
210 Ga0496117_0000037 3300048920 Bacteria 324960
211 Ga0496117_0035611 3300048920 Bacteria 3734
212 Ga0496118_0000034 3300048921 Bacteria 322764
213 Ga0496118_0000597 3300048921 Bacteria 59798
214 Ga0496118_0013662 3300048921 Bacteria 7662
215 Ga0496119_0025407 3300048922 Bacteria 4138
216 Ga0496119_0052438 3300048922 Bacteria 2498
217 Ga0496120_0023047 3300048923 Bacteria 3903
218 Ga0496121_0000021 3300048924 Bacteria 478544
219 Ga0496121_0000288 3300048924 Bacteria 104728
220 Ga0496121_0000849 3300048924 Bacteria 55351
221 Ga0496121_0002215 3300048924 Bacteria 30358
222 Ga0496121_0049885 3300048924 Bacteria 3542
223 Ga0496121_0052243 3300048924 Bacteria 3434
224 Ga0496122_0001435 3300048925 Bacteria 38534
225 Ga0496122_0005272 3300048925 Bacteria 15485
226 Ga0496122_0008556 3300048925 Bacteria 11007
227 Ga0496123_0001840 3300048926 Bacteria 27847
228 Ga0496123_0042749 3300048926 Bacteria 3122
229 Ga0496124_0000033 3300048927 Bacteria 330586
230 Ga0496124_0002879 3300048927 Bacteria 21742
231 Ga0496124_0031022 3300048927 Bacteria 4735
232 Ga0496125_0011586 3300048928 Bacteria 8810
233 Ga0496125_0042141 3300048928 Bacteria 3893
234 Ga0496125_0046224 3300048928 Bacteria 3655
235 Ga0496125_0053723 3300048928 Bacteria 3299
236 Ga0496126_0002673 3300048929 Bacteria 23604
237 Ga0496126_0007106 3300048929 Bacteria 12333
238 Ga0496126_0012232 3300048929 Bacteria 8803
239 Ga0496126_0031801 3300048929 Bacteria 4979
240 Ga0496126_0141900 3300048929 Bacteria 2067
241 Ga0501038_0018866 3300049574 Bacteria 6227
242 Ga0501223_000006 3300049663 Bacteria 133378
243 Ga0501225_0000047 3300049705 Bacteria 41296
244 Ga0501225_0019575 3300049705 Bacteria 1873
245 Ga0501080_0019673 3300049742 Bacteria 6253
246 Ga0500635_0000050 3300053080 Bacteria 76574
247 Ga0500643_000356 3300053087 Bacteria 36357
248 Ga0500643_000531 3300053087 Bacteria 26779
249 Ga0500643_001527 3300053087 Bacteria 13167
250 Ga0500556_0000055 3300053104 Bacteria 115798
251 Ga0500594_0002807 3300053118 Bacteria 3793
252 Ga0500595_000770 3300053119 Bacteria 18804
253 Ga0500608_002900 3300053122 Bacteria 6338
254 Ga0500618_001264 3300053125 Bacteria 11760
255 Ga0500642_0000008 3300053130 Bacteria 293258
256 Ga0500658_0030102 3300053134 Bacteria 2115
257 Ga0500559_0024393 3300053136 Bacteria 2573
258 Ga0500590_018661 3300053148 Bacteria 3590
259 Ga0500604_0027459 3300053151 Bacteria 1647
260 Ga0500616_0005147 3300053153 Bacteria 8983
261 Ga0500627_0000167 3300053158 Bacteria 19475
262 Ga0500627_0031302 3300053158 Bacteria 2234
263 Ga0500636_0077959 3300053177 Bacteria 1913
264 Ga0500645_000379 3300053730 Bacteria 31290
265 Ga0500596_007892 3300053735 Bacteria 1719
266 Ga0501082_0003652 3300060353 Bacteria 13437
267 Ga0466962_0003030 3300061719 Bacteria 8012

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046507 Ga0495606_0032903 Ga0495606_0032903_1112_2512 377
2 3300046501 Ga0495607_0009189 Ga0495607_0009189_5179_6579 379
3 3300046522 Ga0495643_0003184 Ga0495643_0003184_3581_4981 379
4 3300048921 Ga0496118_0000597 Ga0496118_0000597_22797_24137 379
5 3300014326 Ga0157380_10000280 Ga0157380_100002802 387
6 3300046506 Ga0495583_0010365 Ga0495583_0010365_2569_3969 391
7 3300046538 Ga0495609_0008218 Ga0495609_0008218_2459_3859 391
8 3300046660 Ga0495625_0022396 Ga0495625_0022396_3285_4685 391
9 3300005617 Ga0068859_100011466 Ga0068859_1000114664 393
10 3300006931 Ga0097620_100011466 Ga0097620_1000114664 393
11 3300009177 Ga0105248_10000765 Ga0105248_1000076525 393
12 3300025941 Ga0207711_10000556 Ga0207711_1000055625 393
13 3300009101 Ga0105247_10013431 Ga0105247_100134312 397
14 3300009177 Ga0105248_10000014 Ga0105248_10000014261 397
15 3300009553 Ga0105249_10001836 Ga0105249_100018365 397
16 3300013306 Ga0163162_10120572 Ga0163162_101205722 397
17 3300025900 Ga0207710_10006955 Ga0207710_100069552 397
18 3300025941 Ga0207711_10000021 Ga0207711_1000002168 397
19 3300025961 Ga0207712_10001145 Ga0207712_1000114511 397
20 3300046453 Ga0495627_000148 Ga0495627_000148_44318_45775 405
21 3300046471 Ga0495650_0000325 Ga0495650_0000325_68964_70421 405
22 3300047470 Ga0495681_0000037 Ga0495681_0000037_93541_94998 405
23 3300028786 Ga0307517_10027590 Ga0307517_100275908 407
24 3300003759 Ga0055525_1000058 Ga0055525_1000058115 408
25 3300025230 Ga0209563_100024 Ga0209563_100024318 408
26 3300025909 Ga0207705_10130319 Ga0207705_101303192 411
27 3300048922 Ga0496119_0052438 Ga0496119_0052438_362_1774 411
28 3300005331 Ga0070670_100000209 Ga0070670_10000020911 412
29 3300005353 Ga0070669_100027528 Ga0070669_1000275282 412
30 3300005367 Ga0070667_100000127 Ga0070667_10000012723 412
31 3300005618 Ga0068864_100000062 Ga0068864_10000006247 412
32 3300005841 Ga0068863_100000064 Ga0068863_10000006488 412
33 3300005844 Ga0068862_100000079 Ga0068862_10000007977 412
34 3300009011 Ga0105251_10000625 Ga0105251_1000062516 412
35 3300025735 Ga0207713_1011291 Ga0207713_10112912 412
36 3300025925 Ga0207650_10000367 Ga0207650_1000036742 412
37 3300025986 Ga0207658_10000424 Ga0207658_100004246 412
38 3300026088 Ga0207641_10000107 Ga0207641_1000010792 412
39 3300026095 Ga0207676_10000057 Ga0207676_1000005792 412
40 3300028380 Ga0268265_10000080 Ga0268265_1000008092 412
41 3300048911 Ga0496108_0008206 Ga0496108_0008206_1660_3093 412
42 3300048919 Ga0496116_0065888 Ga0496116_0065888_299_1702 412
43 3300048924 Ga0496121_0002215 Ga0496121_0002215_5546_6979 412
44 3300048927 Ga0496124_0031022 Ga0496124_0031022_30_1463 412
45 3300048928 Ga0496125_0053723 Ga0496125_0053723_1800_3233 412
46 3300048929 Ga0496126_0031801 Ga0496126_0031801_2895_4298 412
47 3300053153 Ga0500616_0005147 Ga0500616_0005147_736_2205 413
48 3300049705 Ga0501225_0019575 Ga0501225_0019575_539_1810 415
49 3300060353 Ga0501082_0003652 Ga0501082_0003652_3615_5015 415
50 3300048920 Ga0496117_0035611 Ga0496117_0035611_1030_2568 416
51 3300048921 Ga0496118_0013662 Ga0496118_0013662_1986_3524 416
52 3300005335 Ga0070666_10007963 Ga0070666_100079632 418
53 3300005347 Ga0070668_100000112 Ga0070668_10000011240 418
54 3300005353 Ga0070669_100003070 Ga0070669_1000030706 418
55 3300005367 Ga0070667_100000058 Ga0070667_10000005837 418
56 3300005841 Ga0068863_100000031 Ga0068863_10000003138 418
57 3300005843 Ga0068860_100015407 Ga0068860_1000154072 418
58 3300025903 Ga0207680_10005248 Ga0207680_100052483 418
59 3300025923 Ga0207681_10003078 Ga0207681_100030786 418
60 3300025972 Ga0207668_10000038 Ga0207668_10000038117 418
61 3300025986 Ga0207658_10000037 Ga0207658_1000003737 418
62 3300026088 Ga0207641_10000050 Ga0207641_1000005093 418
63 3300028381 Ga0268264_10011081 Ga0268264_100110812 418
64 3300046471 Ga0495650_0001681 Ga0495650_0001681_12493_13944 418
65 3300053080 Ga0500635_0000050 Ga0500635_0000050_63546_65003 418
66 3300053158 Ga0500627_0031302 Ga0500627_0031302_425_1825 418
67 3300037471 Ga0395905_0011113 Ga0395905_0011113_4905_6338 419
68 3300038443 Ga0395901_0056056 Ga0395901_0056056_297_1730 419
69 3300009093 Ga0105240_10014035 Ga0105240_100140352 420
70 3300048905 Ga0496102_0000010 Ga0496102_0000010_208090_209511 420
71 3300048906 Ga0496103_0000029 Ga0496103_0000029_96799_98220 420
72 3300048919 Ga0496116_0000942 Ga0496116_0000942_4393_5814 420
73 3300048920 Ga0496117_0000037 Ga0496117_0000037_208692_210113 420
74 3300048921 Ga0496118_0000034 Ga0496118_0000034_206496_207917 420
75 3300048922 Ga0496119_0025407 Ga0496119_0025407_2016_3437 420
76 3300048923 Ga0496120_0023047 Ga0496120_0023047_157_1578 420
77 3300048927 Ga0496124_0000033 Ga0496124_0000033_206496_207917 420
78 3300049742 Ga0501080_0019673 Ga0501080_0019673_311_1744 421
79 3300053122 Ga0500608_002900 Ga0500608_002900_3732_5186 421
80 3300046530 Ga0495654_0000825 Ga0495654_0000825_20709_22139 422
81 3300046616 Ga0495668_0004361 Ga0495668_0004361_171_1601 422
82 3300046684 Ga0495669_0018221 Ga0495669_0018221_366_1784 422
83 3300053087 Ga0500643_000356 Ga0500643_000356_20831_22207 422
84 3300053151 Ga0500604_0027459 Ga0500604_0027459_171_1601 422
85 3300028786 Ga0307517_10030898 Ga0307517_100308986 423
86 3300048928 Ga0496125_0011586 Ga0496125_0011586_5304_6818 423
87 3300053148 Ga0500590_018661 Ga0500590_018661_2011_3435 423
88 3300025923 Ga0207681_10026050 Ga0207681_100260502 424
89 3300005578 Ga0068854_100029784 Ga0068854_1000297843 427
90 3300025981 Ga0207640_10022560 Ga0207640_100225603 427
91 3300046506 Ga0495583_0000498 Ga0495583_0000498_48863_50308 428
92 3300046542 Ga0495597_0043866 Ga0495597_0043866_217_1578 428
93 3300046558 Ga0495633_0048051 Ga0495633_0048051_280_1725 428
94 3300046692 Ga0495671_0000020 Ga0495671_0000020_48976_50421 428
95 3300047469 Ga0495673_0000076 Ga0495673_0000076_155052_156497 428
96 3300009545 Ga0105237_10004002 Ga0105237_100040026 429
97 3300025914 Ga0207671_10001304 Ga0207671_100013043 429
98 3300053136 Ga0500559_0024393 Ga0500559_0024393_697_2097 429
99 3300009093 Ga0105240_10018726 Ga0105240_100187263 430
100 3300010375 Ga0105239_10001121 Ga0105239_1000112134 430
101 3300025913 Ga0207695_10016409 Ga0207695_100164094 430
102 3300046460 Ga0495638_0000051 Ga0495638_0000051_49150_50595 430
103 3300046512 Ga0495610_0000034 Ga0495610_0000034_145383_146780 430
104 3300046519 Ga0495632_0000511 Ga0495632_0000511_6636_8081 430
105 3300046519 Ga0495632_0004072 Ga0495632_0004072_2659_4056 430
106 3300046524 Ga0495648_0000032 Ga0495648_0000032_155389_156834 430
107 3300047472 Ga0495686_0000733 Ga0495686_0000733_37451_38890 430
108 3300048090 Ga0495615_0000046 Ga0495615_0000046_19215_20612 430
109 3300048924 Ga0496121_0049885 Ga0496121_0049885_489_2033 430
110 3300048929 Ga0496126_0007106 Ga0496126_0007106_6968_8512 430
111 3300005331 Ga0070670_100004804 Ga0070670_1000048042 431
112 3300005347 Ga0070668_100007149 Ga0070668_1000071492 431
113 3300005719 Ga0068861_100004199 Ga0068861_1000041992 431
114 3300005841 Ga0068863_100040470 Ga0068863_1000404702 431
115 3300009551 Ga0105238_10129019 Ga0105238_101290193 431
116 3300025925 Ga0207650_10098233 Ga0207650_100982332 431
117 3300025972 Ga0207668_10009388 Ga0207668_100093885 431
118 3300025986 Ga0207658_10041159 Ga0207658_100411593 431
119 3300033180 Ga0307510_10184586 Ga0307510_101845862 431
120 3300046506 Ga0495583_0001578 Ga0495583_0001578_11156_12598 431
121 3300048925 Ga0496122_0005272 Ga0496122_0005272_8638_10056 431
122 3300048926 Ga0496123_0001840 Ga0496123_0001840_2211_3629 431
123 3300053118 Ga0500594_0002807 Ga0500594_0002807_1360_2835 431
124 3300053130 Ga0500642_0000008 Ga0500642_0000008_199332_200735 431
125 3300053730 Ga0500645_000379 Ga0500645_000379_3214_4617 431
126 3300053735 Ga0500596_007892 Ga0500596_007892_64_1506 431
127 3300013306 Ga0163162_10005179 Ga0163162_100051795 432
128 3300025315 Ga0207697_10009225 Ga0207697_100092252 432
129 3300046471 Ga0495650_0000172 Ga0495650_0000172_51822_53264 432
130 3300053104 Ga0500556_0000055 Ga0500556_0000055_10839_12260 432
131 3300053119 Ga0500595_000770 Ga0500595_000770_16894_18336 432
132 3300045051 Ga0451576_0000024 Ga0451576_0000024_261481_262917 433
133 3300053087 Ga0500643_000531 Ga0500643_000531_21429_22832 433
134 3300013306 Ga0163162_10211987 Ga0163162_102119871 436
135 3300037466 Ga0395898_0131583 Ga0395898_0131583_166_1650 436
136 3300046660 Ga0495625_0000083 Ga0495625_0000083_30053_31492 436
137 3300033180 Ga0307510_10001520 Ga0307510_1000152011 437
138 3300044694 Ga0466963_0005193 Ga0466963_0005193_4115_5548 438
139 3300044706 Ga0466964_0009430 Ga0466964_0009430_384_1817 438
140 3300044719 Ga0466971_0001721 Ga0466971_0001721_4937_6370 438
141 3300045836 Ga0466958_0004781 Ga0466958_0004781_2679_4112 438
142 3300061719 Ga0466962_0003030 Ga0466962_0003030_2810_4243 438
143 3300005618 Ga0068864_100000111 Ga0068864_1000001116 439
144 3300005842 Ga0068858_100000022 Ga0068858_100000022158 439
145 3300009177 Ga0105248_10005124 Ga0105248_100051249 439
146 3300025941 Ga0207711_10009889 Ga0207711_100098892 439
147 3300026035 Ga0207703_10000048 Ga0207703_1000004855 439
148 3300026095 Ga0207676_10000270 Ga0207676_1000027038 439
149 3300025924 Ga0207694_10043708 Ga0207694_100437083 441
150 3300005842 Ga0068858_100000773 Ga0068858_10000077310 442
151 3300026035 Ga0207703_10001317 Ga0207703_1000131724 442
152 3300044842 Ga0466957_0036439 Ga0466957_0036439_452_1888 442
153 3300046452 Ga0495617_017122 Ga0495617_017122_409_1824 442
154 3300046660 Ga0495625_0008466 Ga0495625_0008466_5772_7193 442
155 3300046692 Ga0495671_0007765 Ga0495671_0007765_2227_3642 442
156 3300053087 Ga0500643_001527 Ga0500643_001527_7103_8524 442
157 3300005563 Ga0068855_100001110 Ga0068855_10000111022 443
158 3300005614 Ga0068856_100085764 Ga0068856_1000857642 443
159 3300009093 Ga0105240_10059040 Ga0105240_100590402 443
160 3300010375 Ga0105239_10138017 Ga0105239_101380172 443
161 3300025913 Ga0207695_10152256 Ga0207695_101522563 443
162 3300025949 Ga0207667_10010753 Ga0207667_100107539 443
163 3300046492 Ga0495585_0019659 Ga0495585_0019659_1439_2905 443
164 3300048924 Ga0496121_0000288 Ga0496121_0000288_34063_35571 443
165 3300048929 Ga0496126_0002673 Ga0496126_0002673_16165_17673 443
166 3300046513 Ga0495616_0000032 Ga0495616_0000032_18809_20239 445
167 3300047445 Ga0495677_0003286 Ga0495677_0003286_191_1612 445
168 3300053158 Ga0500627_0000167 Ga0500627_0000167_3714_5144 445
169 3300005564 Ga0070664_100092619 Ga0070664_1000926192 447
170 3300009093 Ga0105240_10045874 Ga0105240_100458744 447
171 3300025931 Ga0207644_10017436 Ga0207644_100174363 447
172 3300025945 Ga0207679_10036154 Ga0207679_100361542 447
173 3300042005 Ga0439448_0000578 Ga0439448_0000578_2957_4393 447
174 3300005356 Ga0070674_100064925 Ga0070674_1000649252 448
175 3300009978 Ga0105148_100229 Ga0105148_1002292 448
176 3300025937 Ga0207669_10055976 Ga0207669_100559761 448
177 3300031456 Ga0307513_10193647 Ga0307513_101936472 448
178 3300003214 JGI25165J46597_1000024 JGI25165J46597_100002463 449
179 3300005937 Ga0081455_10023017 Ga0081455_100230176 449
180 3300025261 Ga0209233_1000084 Ga0209233_1000084247 449
181 3300005327 Ga0070658_10083351 Ga0070658_100833512 450
182 3300005577 Ga0068857_100005551 Ga0068857_1000055516 450
183 3300026116 Ga0207674_10023824 Ga0207674_100238242 450
184 3300048924 Ga0496121_0052243 Ga0496121_0052243_1510_3054 450
185 3300003323 rootH1_10111426 rootH1_101114263 451
186 3300005564 Ga0070664_100124569 Ga0070664_1001245694 451
187 3300048912 Ga0496109_0072107 Ga0496109_0072107_65_1495 451
188 3300048913 Ga0496110_0084724 Ga0496110_0084724_1155_2585 451
189 3300009553 Ga0105249_10040519 Ga0105249_100405194 452
190 3300017792 Ga0163161_10010927 Ga0163161_100109273 452
191 3300046616 Ga0495668_0024203 Ga0495668_0024203_1125_2555 452
192 3300047472 Ga0495686_0001733 Ga0495686_0001733_13504_14910 452
193 3300048925 Ga0496122_0008556 Ga0496122_0008556_2220_3626 452
194 3300048929 Ga0496126_0141900 Ga0496126_0141900_140_1546 452
195 3300001979 JGI24740J21852_10003095 JGI24740J21852_100030953 453
196 3300001990 JGI24737J22298_10004328 JGI24737J22298_100043282 453
197 3300009093 Ga0105240_10045761 Ga0105240_100457612 453
198 3300009545 Ga0105237_10037149 Ga0105237_100371492 453
199 3300010375 Ga0105239_10051290 Ga0105239_100512902 453
200 3300013100 Ga0157373_10018488 Ga0157373_100184883 453
201 3300013104 Ga0157370_10023950 Ga0157370_100239503 453
202 3300025913 Ga0207695_10026617 Ga0207695_100266172 453
203 3300025914 Ga0207671_10033112 Ga0207671_100331122 453
204 3300005563 Ga0068855_100282946 Ga0068855_1002829462 454
205 3300025933 Ga0207706_10001437 Ga0207706_1000143714 454
206 3300026116 Ga0207674_10009249 Ga0207674_100092495 454
207 3300031911 Ga0307412_10039616 Ga0307412_100396162 454
208 3300001915 JGI24741J21665_1001703 JGI24741J21665_10017033 455
209 3300001989 JGI24739J22299_10003656 JGI24739J22299_100036562 455
210 3300005344 Ga0070661_100029757 Ga0070661_1000297572 455
211 3300005455 Ga0070663_100014087 Ga0070663_1000140872 455
212 3300005457 Ga0070662_100065568 Ga0070662_1000655682 455
213 3300005563 Ga0068855_100063595 Ga0068855_1000635952 455
214 3300009174 Ga0105241_10015301 Ga0105241_100153012 455
215 3300013105 Ga0157369_10065914 Ga0157369_100659142 455
216 3300017792 Ga0163161_10014999 Ga0163161_100149993 455
217 3300025904 Ga0207647_10010515 Ga0207647_100105152 455
218 3300025919 Ga0207657_10011115 Ga0207657_100111156 455
219 3300025933 Ga0207706_10007899 Ga0207706_100078992 455
220 3300026041 Ga0207639_10000272 Ga0207639_1000027222 455
221 3300026041 Ga0207639_10000311 Ga0207639_1000031119 455
222 3300026041 Ga0207639_10000567 Ga0207639_1000056720 455
223 3300026067 Ga0207678_10000007 Ga0207678_100000079 455
224 3300026078 Ga0207702_10009619 Ga0207702_100096196 455
225 3300048928 Ga0496125_0046224 Ga0496125_0046224_400_1812 455
226 3300053134 Ga0500658_0030102 Ga0500658_0030102_117_1565 455
227 3300028786 Ga0307517_10129477 Ga0307517_101294772 456
228 iso_pu_bacteria 2643221563 2643832402 456
229 iso_pu_bacteria 2643221608 2644053803 456
230 3300005844 Ga0068862_100005605 Ga0068862_1000056056 458
231 3300028380 Ga0268265_10006848 Ga0268265_100068483 458
232 3300048924 Ga0496121_0000021 Ga0496121_0000021_307143_308543 458
233 iso_pu_bacteria 2919138771 2919141958 459
234 3300005289 Ga0065704_10073631 Ga0065704_100736313 461
235 3300048911 Ga0496108_0012103 Ga0496108_0012103_1985_3391 461
236 3300048919 Ga0496116_0034485 Ga0496116_0034485_1964_3370 461
237 3300048924 Ga0496121_0000849 Ga0496121_0000849_352_1758 461
238 3300048928 Ga0496125_0042141 Ga0496125_0042141_1991_3397 461
239 3300048929 Ga0496126_0012232 Ga0496126_0012232_5937_7343 461
240 3300053125 Ga0500618_001264 Ga0500618_001264_600_2009 461
241 3300053177 Ga0500636_0077959 Ga0500636_0077959_473_1894 461
242 3300046460 Ga0495638_0000149 Ga0495638_0000149_15236_16684 462
243 iso_pu_bacteria 3000865235 3000866506 462
244 3300002077 JGI24744J21845_10003552 JGI24744J21845_100035522 464
245 3300005328 Ga0070676_10000010 Ga0070676_1000001012 464
246 3300005563 Ga0068855_100000023 Ga0068855_100000023150 464
247 3300005578 Ga0068854_100000103 Ga0068854_10000010346 464
248 3300006237 Ga0097621_100026725 Ga0097621_1000267252 464
249 3300006358 Ga0068871_100127744 Ga0068871_1001277442 464
250 3300025981 Ga0207640_10000332 Ga0207640_100003322 464
251 3300049574 Ga0501038_0018866 Ga0501038_0018866_3563_4981 464
252 3300046460 Ga0495638_0000204 Ga0495638_0000204_56353_57792 465
253 3300049663 Ga0501223_000006 Ga0501223_000006_31181_32605 465
254 3300049705 Ga0501225_0000047 Ga0501225_0000047_29820_31244 465
255 3300048925 Ga0496122_0001435 Ga0496122_0001435_3836_5335 466
256 3300048926 Ga0496123_0042749 Ga0496123_0042749_878_2377 466
257 3300048927 Ga0496124_0002879 Ga0496124_0002879_1224_2723 466
258 3300001904 JGI24736J21556_1000010 JGI24736J21556_100001011 470
259 3300001979 JGI24740J21852_10012907 JGI24740J21852_100129073 470
260 3300002067 JGI24735J21928_10008013 JGI24735J21928_100080135 470
261 3300002075 JGI24738J21930_10001036 JGI24738J21930_100010364 470
262 3300005834 Ga0068851_10025050 Ga0068851_100250503 470
263 3300013100 Ga0157373_10064437 Ga0157373_100644373 470
264 3300025904 Ga0207647_10000205 Ga0207647_1000020510 470
265 3300025911 Ga0207654_10004681 Ga0207654_100046812 470
266 3300025913 Ga0207695_10010258 Ga0207695_100102584 470
267 3300025914 Ga0207671_10005808 Ga0207671_100058081 470
268 3300025924 Ga0207694_10002672 Ga0207694_100026723 470
269 3300026078 Ga0207702_10077794 Ga0207702_100777942 470
270 3300026142 Ga0207698_10105165 Ga0207698_101051651 470
271 3300046691 Ga0495670_0024371 Ga0495670_0024371_1027_2466 470

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02321

OEP

Outer membrane efflux protein

320

501

0.97

PF02321

OEP

Outer membrane efflux protein

226

291

0.94

PF02321

OEP

Outer membrane efflux protein

129

233

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5azp-assembly1.cif.gz_A crystal structure of a membrane protein from pseudomonas aeruginosa 0.8817 15 461
5azp-assembly1.cif.gz_A crystal structure of a membrane protein from pseudomonas aeruginosa 0.8761 15 461
1yc9-assembly1.cif.gz_A the crystal structure of the outer membrane protein vcec from the bacterial pathogen vibrio cholerae at 1.8 resolution 0.8742 47 460
1yc9-assembly1.cif.gz_A the crystal structure of the outer membrane protein vcec from the bacterial pathogen vibrio cholerae at 1.8 resolution 0.8702 47 460
4mt0-assembly1.cif.gz_A crystal structure of the open state of the neisseria gonorrhoeae mtre outer membrane channel 0.863 43 459
ID Description Score Start End Superfamily
5iuyA01 Mainly Alpha;Up-down Bundle;Outer membrane efflux proteins (OEP);Outer membrane efflux proteins (OEP) 0.9173 15 461 1.20.1600.10
5iuyA01 Mainly Alpha;Up-down Bundle;Outer membrane efflux proteins (OEP);Outer membrane efflux proteins (OEP) 0.9125 15 461 1.20.1600.10
1yc9A01 Mainly Alpha;Up-down Bundle;Outer membrane efflux proteins (OEP);Outer membrane efflux proteins (OEP) 0.8999 47 459 1.20.1600.10
1yc9A01 Mainly Alpha;Up-down Bundle;Outer membrane efflux proteins (OEP);Outer membrane efflux proteins (OEP) 0.8947 47 459 1.20.1600.10
4mt0A01 Mainly Alpha;Up-down Bundle;Outer membrane efflux proteins (OEP);Outer membrane efflux proteins (OEP) 0.8878 43 459 1.20.1600.10
ID Description Score Start End GO Terms
AF-A0A6N8NMU4-F1-model_v4 Multidrug efflux transporter outer membrane subunit MdtP 0.9147 126 434 GO:0009279
GO:0015562
AF-A0A0B8P6F3-F1-model_v4 RND efflux system, outer membrane lipoprotein cmeC 0.9145 107 460 GO:0009279
GO:0015562
AF-A0A6L7JTN8-F1-model_v4 deleted 0.9096 162 469
AF-A0A411LNB6-F1-model_v4 TolC family protein 0.907 168 460 GO:0015562
AF-A0A6N8NMU4-F1-model_v4 Multidrug efflux transporter outer membrane subunit MdtP 0.9036 126 434 GO:0009279
GO:0015562

Feature Viewer

pLDDT pTM Quality
81.89 0.76 High
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Predicted Structure (AlphaFold2)

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