F377243

General Info

Members Datasets Scaffolds Average Seq Length
270 207 540 314

Family's Representative Sequence

Representative Sequence 3300049580|Ga0501046_0000108|Ga0501046_0000108_45869_46951
Length 360
Sequence MLSTKTNAEALASLGRESKQNPMSAKSKSSPLEIKTLEATKSWGRGRVYDTIVETIGHTPLVRLHKIAKAASAKADVLIKLEFFNPLSSVKDRIGVAMIDTLEAQGRITPGKTVLIEPTSGNTGIGLAFVAASRGYRLILVMPETMSLERRKILTHLGAELELMPGSGGMPAAVARAEELANSLPDAVIPGQFDNPANPLVHELTTAEEIWSDTGGNVDALVIGVGTGGTLSGVARALKPRKPDLKIIAVEPTTSAVLSGGQRGPHKIQGIGAGFIPSILDTEYIDEVVTVNNDEAFEKARAIARLEGIPGGISTGANVAAALKVAARPEYEGKTIVTFAPSGAERYFSSELFVDPLGKG

Samples

Sample ID Description Type Environment
1 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
8 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
9 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
53 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
56 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
61 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
83 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
84 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
85 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
86 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
87 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
93 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
96 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
97 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
101 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
102 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
104 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
105 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
106 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
107 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
108 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
109 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
110 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
114 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
115 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
116 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
117 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
118 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
121 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
122 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
123 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
124 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
127 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
128 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
129 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
130 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
131 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
132 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
133 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
134 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
139 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
140 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
141 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
142 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
146 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
147 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
151 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
152 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
163 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
164 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
165 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
166 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
167 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
168 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
169 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
170 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
174 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
180 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
181 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
182 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
183 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
184 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
185 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
186 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
187 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
188 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
189 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
190 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
191 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
192 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
193 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
194 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
195 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
196 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
197 2643221734 Bosea sp. Root670 Isolate Unclassified
198 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
199 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
200 2851182111 Bosea sp. Tri-44 Isolate Nodule
201 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
202 2902330777 Methylobacterium sp. 2A Isolate Unclassified
203 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
204 2909042592 Labrys sp. LIt4 Isolate Nodule
205 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
206 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
207 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.44
Metatranscriptomes 0.74
Isolates 4.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.11
Nodule 1.11
Rhizoplane 7.78
Rhizosphere 67.04
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501046_0000108 3300049580 Bacteria 87513
2 SwRhRL2b_contig_507762 2162886007 Bacteria 2613
3 JGI25159J45721_1004391 3300002987 Bacteria 4693
4 JGI25151J46595_10000030 3300003187 Bacteria 202084
5 JGI25153J46596_10000391 3300003215 Bacteria 29754
6 Ga0006562J51391_1060396 3300003578 Bacteria 1950
7 Ga0055526_1003842 3300003771 Bacteria 9321
8 Ga0055524_1000069 3300003775 Bacteria 128956
9 Ga0055543_1024942 3300004625 Bacteria 1071
10 Ga0065165_1000132 3300005262 Bacteria 128732
11 Ga0065704_10000370 3300005289 Bacteria 38135
12 Ga0065707_10084332 3300005295 Bacteria 7333
13 Ga0065707_10204695 3300005295 Bacteria 1290
14 Ga0070658_10084813 3300005327 Bacteria 2605
15 Ga0068869_100367087 3300005334 Bacteria 1177
16 Ga0070666_10077925 3300005335 Bacteria 2262
17 Ga0070680_100005087 3300005336 Bacteria 9922
18 Ga0070682_100005140 3300005337 Bacteria 7279
19 Ga0070682_100131299 3300005337 Bacteria 1696
20 Ga0070660_100048459 3300005339 Bacteria 3264
21 Ga0070668_100091763 3300005347 Bacteria 2395
22 Ga0070674_100021790 3300005356 Bacteria 4123
23 Ga0070663_100001178 3300005455 Bacteria 14395
24 Ga0070678_100244990 3300005456 Bacteria 1500
25 Ga0070681_10000614 3300005458 Bacteria 29218
26 Ga0070681_10009262 3300005458 Bacteria 9680
27 Ga0070679_100423998 3300005530 Bacteria 1276
28 Ga0068853_100068028 3300005539 Bacteria 3096
29 Ga0070695_100014429 3300005545 Bacteria 4763
30 Ga0070695_100019924 3300005545 Bacteria 4091
31 Ga0070696_100004629 3300005546 Bacteria 9187
32 Ga0070665_100028269 3300005548 Bacteria 5647
33 Ga0070704_100060237 3300005549 Bacteria 2711
34 Ga0070664_100015702 3300005564 Bacteria 6198
35 Ga0068857_100020464 3300005577 Bacteria 5820
36 Ga0070702_100028549 3300005615 Bacteria 3024
37 Ga0068852_100571074 3300005616 Bacteria 1133
38 Ga0068861_100080328 3300005719 Bacteria 2551
39 Ga0068862_100204514 3300005844 Bacteria 1782
40 Ga0081455_10001276 3300005937 Bacteria 31404
41 Ga0081540_1012790 3300005983 Bacteria 5492
42 Ga0097620_100043307 3300006931 Bacteria 4524
43 Ga0111539_10016270 3300009094 Bacteria 9224
44 Ga0111539_10195259 3300009094 Bacteria 2361
45 Ga0111539_10218783 3300009094 Bacteria 2218
46 Ga0111539_10417900 3300009094 Bacteria 1562
47 Ga0105245_10055321 3300009098 Bacteria 3564
48 Ga0105245_10142933 3300009098 Bacteria 2255
49 Ga0114129_10157115 3300009147 Bacteria 3109
50 Ga0105243_10079168 3300009148 Bacteria 2678
51 Ga0105237_10163408 3300009545 Bacteria 2225
52 Ga0105238_10045131 3300009551 Bacteria 4452
53 Ga0105148_101292 3300009978 Bacteria 1758
54 Ga0105246_10022413 3300011119 Bacteria 4074
55 Ga0157370_10247753 3300013104 Bacteria 1648
56 Ga0157378_10392500 3300013297 Bacteria 1365
57 Ga0157375_10091866 3300013308 Bacteria 3098
58 Ga0157379_10204997 3300014968 Bacteria 1784
59 Ga0206356_10428281 3300020070 Bacteria 1380
60 Ga0213872_10000461 3300021361 Bacteria 33198
61 Ga0213874_10022070 3300021377 Bacteria 1762
62 Ga0213876_10003969 3300021384 Bacteria 8346
63 Ga0213875_10009300 3300021388 Bacteria 4986
64 Ga0213875_10074769 3300021388 Bacteria 1581
65 Ga0209130_1000208 3300025284 Bacteria 78707
66 Ga0209675_1000800 3300025291 Bacteria 20780
67 Ga0209025_1000063 3300025294 Bacteria 303962
68 Ga0209025_1001201 3300025294 Bacteria 36389
69 Ga0209564_1000052 3300025295 Bacteria 356578
70 Ga0209758_1000185 3300025297 Bacteria 139330
71 Ga0209256_1000172 3300025299 Bacteria 129025
72 Ga0207647_10072810 3300025904 Bacteria 2071
73 Ga0207707_10031237 3300025912 Bacteria 4660
74 Ga0207671_10051071 3300025914 Bacteria 3063
75 Ga0207663_10221505 3300025916 Bacteria 1377
76 Ga0207660_10041885 3300025917 Bacteria 3212
77 Ga0207660_10370176 3300025917 Bacteria 1151
78 Ga0207657_10027653 3300025919 Bacteria 5190
79 Ga0207657_10038470 3300025919 Bacteria 4258
80 Ga0207652_10068506 3300025921 Bacteria 3079
81 Ga0207652_10159395 3300025921 Bacteria 2022
82 Ga0207687_10008311 3300025927 Bacteria 6791
83 Ga0207690_10056667 3300025932 Bacteria 2644
84 Ga0207706_10089898 3300025933 Bacteria 2700
85 Ga0207679_10013666 3300025945 Bacteria 5324
86 Ga0207712_10236182 3300025961 Bacteria 1470
87 Ga0207703_10015627 3300026035 Bacteria 5920
88 Ga0207639_10055881 3300026041 Bacteria 3023
89 Ga0207678_10001867 3300026067 Bacteria 19220
90 Ga0207678_10329148 3300026067 Bacteria 1315
91 Ga0207674_10010629 3300026116 Bacteria 10408
92 Ga0207675_100347087 3300026118 Bacteria 1454
93 Ga0207683_10036841 3300026121 Bacteria 4260
94 Ga0207683_10129157 3300026121 Bacteria 2272
95 Ga0268265_10034010 3300028380 Bacteria 3712
96 Ga0268264_10217978 3300028381 Bacteria 1755
97 Ga0265318_10009718 3300028577 Bacteria 4216
98 Ga0265338_10235552 3300028800 Bacteria 1359
99 Ga0265332_10023082 3300031238 Bacteria 2744
100 Ga0265320_10000890 3300031240 Bacteria 22491
101 Ga0265325_10002800 3300031241 Bacteria 11641
102 Ga0265325_10011620 3300031241 Bacteria 5057
103 Ga0265325_10095706 3300031241 Bacteria 1459
104 Ga0265339_10006953 3300031249 Bacteria 7361
105 Ga0265339_10047608 3300031249 Bacteria 2354
106 Ga0265331_10001851 3300031250 Bacteria 14948
107 Ga0265327_10000615 3300031251 Bacteria 58807
108 Ga0307513_10296784 3300031456 Bacteria 1385
109 Ga0265313_10005313 3300031595 Bacteria 9523
110 Ga0265313_10018280 3300031595 Bacteria 3942
111 Ga0265314_10041344 3300031711 Bacteria 3301
112 Ga0265342_10036140 3300031712 Bacteria 3019
113 Ga0307405_10030596 3300031731 Bacteria 3158
114 Ga0307410_10040767 3300031852 Bacteria 3058
115 Ga0307406_10090864 3300031901 Bacteria 2056
116 Ga0307407_10225941 3300031903 Bacteria 1268
117 Ga0307416_100121611 3300032002 Bacteria 2328
118 Ga0307411_10442470 3300032005 Bacteria 1085
119 Ga0373938_0022948 3300034957 Bacteria 1279
120 Ga0373940_0043386 3300035088 Bacteria 1243
121 Ga0373923_0006691 3300035111 Bacteria 4004
122 Ga0373941_0029001 3300035115 Bacteria 1629
123 Ga0373954_0075968 3300035118 Bacteria 1601
124 Ga0373960_0002110 3300035121 Bacteria 4478
125 Ga0373955_0288506 3300035172 Bacteria 988
126 Ga0373942_0028354 3300035207 Bacteria 1463
127 Ga0373931_0020075 3300035691 Bacteria 3341
128 Ga0373927_0066160 3300035695 Bacteria 2338
129 Ga0373927_0253058 3300035695 Bacteria 1158
130 Ga0373933_0000261 3300035724 Bacteria 34746
131 Ga0373937_0172023 3300036401 Bacteria 2032
132 Ga0436364_1349280 3300037853 Bacteria 4000
133 Ga0400491_03102 3300038727 Bacteria 3809
134 Ga0400485_03726 3300038735 Bacteria 57834
135 Ga0400488_34069 3300038741 Bacteria 1940
136 Ga0400486_11938 3300038742 Bacteria 47536
137 Ga0400489_26829 3300039093 Bacteria 59908
138 Ga0400487_24489 3300039110 Bacteria 52884
139 Ga0436365_0174563 3300039437 Bacteria 17649
140 Ga0436365_0920278 3300039437 Bacteria 78160
141 Ga0436363_0582237 3300039450 Bacteria 12110
142 Ga0436363_0736013 3300039450 Bacteria 7341
143 Ga0436363_0890290 3300039450 Bacteria 1166
144 Ga0436362_0813264 3300039453 Bacteria 1690
145 Ga0436362_0837885 3300039453 Bacteria 10424
146 Ga0451577_0046888 3300042876 Bacteria 3865
147 Ga0451577_0099484 3300042876 Bacteria 2598
148 Ga0453683_0000024 3300044673 Bacteria 263554
149 Ga0453684_0014062 3300044712 Bacteria 12873
150 Ga0453684_0021770 3300044712 Bacteria 9553
151 Ga0453684_0026909 3300044712 Bacteria 8283
152 Ga0453684_0129524 3300044712 Bacteria 3030
153 Ga0451576_0000552 3300045051 Bacteria 80314
154 Ga0451576_0008302 3300045051 Bacteria 12207
155 Ga0466967_0014258 3300045976 Bacteria 6183
156 Ga0495606_0233225 3300046507 Bacteria 1030
157 Ga0495652_0174001 3300046529 Bacteria 1659
158 Ga0495587_0168982 3300046536 Bacteria 1243
159 Ga0495633_0001194 3300046558 Bacteria 20855
160 Ga0495657_0095636 3300046675 Bacteria 1899
161 Ga0495613_0000240 3300046689 Bacteria 51775
162 Ga0496100_0304358 3300048903 Bacteria 1194
163 Ga0496101_0026294 3300048904 Bacteria 4046
164 Ga0496102_0204991 3300048905 Bacteria 1859
165 Ga0496103_0005254 3300048906 Bacteria 7770
166 Ga0496104_0035767 3300048907 Bacteria 4639
167 Ga0496104_0244377 3300048907 Bacteria 1707
168 Ga0496106_0036214 3300048909 Bacteria 3691
169 Ga0496106_0075956 3300048909 Bacteria 2574
170 Ga0496107_0012288 3300048910 Bacteria 5976
171 Ga0496107_0193257 3300048910 Bacteria 1512
172 Ga0496108_0001446 3300048911 Bacteria 18765
173 Ga0496109_0005035 3300048912 Bacteria 11041
174 Ga0496110_0001326 3300048913 Bacteria 17778
175 Ga0496110_0004395 3300048913 Bacteria 10916
176 Ga0496110_0301293 3300048913 Bacteria 1460
177 Ga0496112_0010673 3300048915 Bacteria 8347
178 Ga0496114_0014953 3300048917 Bacteria 6238
179 Ga0496115_0025381 3300048918 Bacteria 4613
180 Ga0496115_0040343 3300048918 Bacteria 3711
181 Ga0496115_0067350 3300048918 Bacteria 2896
182 Ga0496115_0153764 3300048918 Bacteria 1900
183 Ga0496117_0017599 3300048920 Bacteria 5963
184 Ga0496118_0001677 3300048921 Bacteria 32432
185 Ga0496123_0040362 3300048926 Bacteria 3252
186 Ga0496124_0057682 3300048927 Bacteria 3271
187 Ga0496125_0052220 3300048928 Bacteria 3363
188 Ga0496126_0037291 3300048929 Bacteria 4538
189 Ga0496126_0044110 3300048929 Bacteria 4109
190 Ga0496126_0190323 3300048929 Bacteria 1738
191 Ga0501031_0243146 3300049568 Bacteria 1170
192 Ga0501033_0054926 3300049570 Bacteria 2945
193 Ga0501033_0114209 3300049570 Bacteria 1963
194 Ga0501034_0024734 3300049571 Bacteria 6109
195 Ga0501034_0064761 3300049571 Bacteria 3669
196 Ga0501034_0077221 3300049571 Bacteria 3336
197 Ga0501034_0124566 3300049571 Bacteria 2562
198 Ga0501036_0094094 3300049572 Bacteria 2532
199 Ga0501036_0152643 3300049572 Bacteria 1948
200 Ga0501036_0192233 3300049572 Bacteria 1717
201 Ga0501037_0188707 3300049573 Bacteria 1460
202 Ga0501038_0008207 3300049574 Bacteria 9605
203 Ga0501038_0157240 3300049574 Bacteria 1850
204 Ga0501043_0016434 3300049579 Bacteria 5803
205 Ga0501043_0024321 3300049579 Bacteria 4753
206 Ga0501043_0125499 3300049579 Bacteria 2013
207 Ga0501046_0122247 3300049580 Bacteria 1980
208 Ga0501046_0254380 3300049580 Bacteria 1292
209 Ga0501047_0000432 3300049581 Bacteria 46529
210 Ga0501047_0021412 3300049581 Bacteria 6206
211 Ga0501047_0206779 3300049581 Bacteria 1822
212 Ga0501047_0268699 3300049581 Bacteria 1552
213 Ga0501048_0158998 3300049582 Bacteria 1599
214 Ga0501070_0110475 3300049586 Bacteria 2272
215 Ga0501070_0235111 3300049586 Bacteria 1501
216 Ga0501073_0035543 3300049589 Bacteria 3541
217 Ga0501077_0165477 3300049593 Bacteria 1405
218 Ga0501223_000018 3300049663 Bacteria 67853
219 Ga0501224_000002 3300049664 Bacteria 229331
220 Ga0501233_000006 3300049668 Bacteria 39891
221 Ga0501235_000017 3300049669 Bacteria 31124
222 Ga0501225_0000049 3300049705 Bacteria 40546
223 Ga0501234_000082 3300049707 Bacteria 11549
224 Ga0501080_0017185 3300049742 Bacteria 6683
225 Ga0501080_0132720 3300049742 Bacteria 2305
226 Ga0501035_0007044 3300049822 Bacteria 10508
227 Ga0501035_0038849 3300049822 Bacteria 4309
228 Ga0501035_0059147 3300049822 Bacteria 3413
229 Ga0501044_0036567 3300049823 Bacteria 5137
230 Ga0501044_0097928 3300049823 Bacteria 2953
231 Ga0501044_0134797 3300049823 Bacteria 2461
232 Ga0501226_000026 3300049853 Bacteria 91031
233 nmdc:mga06z11_126595_c1 3300050494 Bacteria 1430
234 nmdc:mga05p37_602858_c1 3300050507 Bacteria 1239
235 nmdc:mga05p37_92611_c1 3300050507 Bacteria 3724
236 nmdc:mga08y16_165413_c1 3300050511 Bacteria 2298
237 nmdc:mga08y16_221454_c1 3300050511 Bacteria 1959
238 nmdc:mga0rr50_329123_c1 3300050513 Bacteria 1282
239 nmdc:mga0a205_47308_c1 3300050515 Bacteria 4150
240 Ga0495601_0204183 3300053077 Bacteria 1291
241 Ga0495612_0090562 3300053078 Bacteria 1294
242 Ga0500635_0000671 3300053080 Bacteria 8678
243 Ga0495595_0103984 3300053084 Bacteria 1372
244 Ga0500643_000021 3300053087 Bacteria 284326
245 Ga0500643_001756 3300053087 Bacteria 11949
246 Ga0500643_002914 3300053087 Bacteria 8498
247 Ga0500641_0000581 3300053096 Bacteria 13178
248 Ga0500556_0000054 3300053104 Bacteria 115949
249 Ga0500562_026702 3300053108 Bacteria 1514
250 Ga0500595_007954 3300053119 Bacteria 4358
251 Ga0500608_000096 3300053122 Bacteria 35522
252 Ga0500652_000265 3300053131 Bacteria 19563
253 Ga0500616_0045530 3300053153 Bacteria 2337
254 Ga0500622_0002229 3300053156 Bacteria 14273
255 Ga0500636_0010834 3300053177 Bacteria 5328
256 Ga0500637_0008866 3300053178 Bacteria 5094
257 Ga0500601_000840 3300053737 Bacteria 3768
258 2513592953 2513237087 Bacteria 5817514
259 2596375712 2595698237 Bacteria 6712432
260 2644737578 2643221734 Bacteria 5365412
261 2739793660 2739367756 Bacteria 4553612
262 2842701483 2842698319 Bacteria 5190321
263 2851188001 2851182111 Bacteria 6047226
264 2889310654 2889306138 Bacteria 6358934
265 2902334806 2902330777 Bacteria 6395352
266 2902405270 2902405164 Bacteria 6784948
267 2909044823 2909042592 Bacteria 6499737
268 2928129257 2928125067 Bacteria 5937560
269 3003669522 3003665799 Bacteria 7279786
270 8054461112 8054460903 Bacteria 4872905
271 Ga0501046_0000108
272 SwRhRL2b_contig_507762
273 JGI25159J45721_1004391
274 JGI25151J46595_10000030
275 JGI25153J46596_10000391
276 Ga0006562J51391_1060396
277 Ga0055526_1003842
278 Ga0055524_1000069
279 Ga0055543_1024942
280 Ga0065165_1000132
281 Ga0065704_10000370
282 Ga0065707_10084332
283 Ga0065707_10204695
284 Ga0070658_10084813
285 Ga0068869_100367087
286 Ga0070666_10077925
287 Ga0070680_100005087
288 Ga0070682_100005140
289 Ga0070682_100131299
290 Ga0070660_100048459
291 Ga0070668_100091763
292 Ga0070674_100021790
293 Ga0070663_100001178
294 Ga0070678_100244990
295 Ga0070681_10000614
296 Ga0070681_10009262
297 Ga0070679_100423998
298 Ga0068853_100068028
299 Ga0070695_100014429
300 Ga0070695_100019924
301 Ga0070696_100004629
302 Ga0070665_100028269
303 Ga0070704_100060237
304 Ga0070664_100015702
305 Ga0068857_100020464
306 Ga0070702_100028549
307 Ga0068852_100571074
308 Ga0068861_100080328
309 Ga0068862_100204514
310 Ga0081455_10001276
311 Ga0081540_1012790
312 Ga0097620_100043307
313 Ga0111539_10016270
314 Ga0111539_10195259
315 Ga0111539_10218783
316 Ga0111539_10417900
317 Ga0105245_10055321
318 Ga0105245_10142933
319 Ga0114129_10157115
320 Ga0105243_10079168
321 Ga0105237_10163408
322 Ga0105238_10045131
323 Ga0105148_101292
324 Ga0105246_10022413
325 Ga0157370_10247753
326 Ga0157378_10392500
327 Ga0157375_10091866
328 Ga0157379_10204997
329 Ga0206356_10428281
330 Ga0213872_10000461
331 Ga0213874_10022070
332 Ga0213876_10003969
333 Ga0213875_10009300
334 Ga0213875_10074769
335 Ga0209130_1000208
336 Ga0209675_1000800
337 Ga0209025_1000063
338 Ga0209025_1001201
339 Ga0209564_1000052
340 Ga0209758_1000185
341 Ga0209256_1000172
342 Ga0207647_10072810
343 Ga0207707_10031237
344 Ga0207671_10051071
345 Ga0207663_10221505
346 Ga0207660_10041885
347 Ga0207660_10370176
348 Ga0207657_10027653
349 Ga0207657_10038470
350 Ga0207652_10068506
351 Ga0207652_10159395
352 Ga0207687_10008311
353 Ga0207690_10056667
354 Ga0207706_10089898
355 Ga0207679_10013666
356 Ga0207712_10236182
357 Ga0207703_10015627
358 Ga0207639_10055881
359 Ga0207678_10001867
360 Ga0207678_10329148
361 Ga0207674_10010629
362 Ga0207675_100347087
363 Ga0207683_10036841
364 Ga0207683_10129157
365 Ga0268265_10034010
366 Ga0268264_10217978
367 Ga0265318_10009718
368 Ga0265338_10235552
369 Ga0265332_10023082
370 Ga0265320_10000890
371 Ga0265325_10002800
372 Ga0265325_10011620
373 Ga0265325_10095706
374 Ga0265339_10006953
375 Ga0265339_10047608
376 Ga0265331_10001851
377 Ga0265327_10000615
378 Ga0307513_10296784
379 Ga0265313_10005313
380 Ga0265313_10018280
381 Ga0265314_10041344
382 Ga0265342_10036140
383 Ga0307405_10030596
384 Ga0307410_10040767
385 Ga0307406_10090864
386 Ga0307407_10225941
387 Ga0307416_100121611
388 Ga0307411_10442470
389 Ga0373938_0022948
390 Ga0373940_0043386
391 Ga0373923_0006691
392 Ga0373941_0029001
393 Ga0373954_0075968
394 Ga0373960_0002110
395 Ga0373955_0288506
396 Ga0373942_0028354
397 Ga0373931_0020075
398 Ga0373927_0066160
399 Ga0373927_0253058
400 Ga0373933_0000261
401 Ga0373937_0172023
402 Ga0436364_1349280
403 Ga0400491_03102
404 Ga0400485_03726
405 Ga0400488_34069
406 Ga0400486_11938
407 Ga0400489_26829
408 Ga0400487_24489
409 Ga0436365_0174563
410 Ga0436365_0920278
411 Ga0436363_0582237
412 Ga0436363_0736013
413 Ga0436363_0890290
414 Ga0436362_0813264
415 Ga0436362_0837885
416 Ga0451577_0046888
417 Ga0451577_0099484
418 Ga0453683_0000024
419 Ga0453684_0014062
420 Ga0453684_0021770
421 Ga0453684_0026909
422 Ga0453684_0129524
423 Ga0451576_0000552
424 Ga0451576_0008302
425 Ga0466967_0014258
426 Ga0495606_0233225
427 Ga0495652_0174001
428 Ga0495587_0168982
429 Ga0495633_0001194
430 Ga0495657_0095636
431 Ga0495613_0000240
432 Ga0496100_0304358
433 Ga0496101_0026294
434 Ga0496102_0204991
435 Ga0496103_0005254
436 Ga0496104_0035767
437 Ga0496104_0244377
438 Ga0496106_0036214
439 Ga0496106_0075956
440 Ga0496107_0012288
441 Ga0496107_0193257
442 Ga0496108_0001446
443 Ga0496109_0005035
444 Ga0496110_0001326
445 Ga0496110_0004395
446 Ga0496110_0301293
447 Ga0496112_0010673
448 Ga0496114_0014953
449 Ga0496115_0025381
450 Ga0496115_0040343
451 Ga0496115_0067350
452 Ga0496115_0153764
453 Ga0496117_0017599
454 Ga0496118_0001677
455 Ga0496123_0040362
456 Ga0496124_0057682
457 Ga0496125_0052220
458 Ga0496126_0037291
459 Ga0496126_0044110
460 Ga0496126_0190323
461 Ga0501031_0243146
462 Ga0501033_0054926
463 Ga0501033_0114209
464 Ga0501034_0024734
465 Ga0501034_0064761
466 Ga0501034_0077221
467 Ga0501034_0124566
468 Ga0501036_0094094
469 Ga0501036_0152643
470 Ga0501036_0192233
471 Ga0501037_0188707
472 Ga0501038_0008207
473 Ga0501038_0157240
474 Ga0501043_0016434
475 Ga0501043_0024321
476 Ga0501043_0125499
477 Ga0501046_0122247
478 Ga0501046_0254380
479 Ga0501047_0000432
480 Ga0501047_0021412
481 Ga0501047_0206779
482 Ga0501047_0268699
483 Ga0501048_0158998
484 Ga0501070_0110475
485 Ga0501070_0235111
486 Ga0501073_0035543
487 Ga0501077_0165477
488 Ga0501223_000018
489 Ga0501224_000002
490 Ga0501233_000006
491 Ga0501235_000017
492 Ga0501225_0000049
493 Ga0501234_000082
494 Ga0501080_0017185
495 Ga0501080_0132720
496 Ga0501035_0007044
497 Ga0501035_0038849
498 Ga0501035_0059147
499 Ga0501044_0036567
500 Ga0501044_0097928
501 Ga0501044_0134797
502 Ga0501226_000026
503 nmdc:mga06z11_126595_c1
504 nmdc:mga05p37_602858_c1
505 nmdc:mga05p37_92611_c1
506 nmdc:mga08y16_165413_c1
507 nmdc:mga08y16_221454_c1
508 nmdc:mga0rr50_329123_c1
509 nmdc:mga0a205_47308_c1
510 Ga0495601_0204183
511 Ga0495612_0090562
512 Ga0500635_0000671
513 Ga0495595_0103984
514 Ga0500643_000021
515 Ga0500643_001756
516 Ga0500643_002914
517 Ga0500641_0000581
518 Ga0500556_0000054
519 Ga0500562_026702
520 Ga0500595_007954
521 Ga0500608_000096
522 Ga0500652_000265
523 Ga0500616_0045530
524 Ga0500622_0002229
525 Ga0500636_0010834
526 Ga0500637_0008866
527 Ga0500601_000840
528 2513592953
529 2596375712
530 2644737578
531 2739793660
532 2842701483
533 2851188001
534 2889310654
535 2902334806
536 2902405270
537 2909044823
538 2928129257
539 3003669522
540 8054461112

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00291

PALP

Pyridoxal-phosphate dependent enzyme

52

342

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1o58-assembly1.cif.gz_B crystal structure of o-acetylserine sulfhydrylase (tm0665) from thermotoga maritima at 1.80 a resolution 0.9551 6 299
2eco-assembly1.cif.gz_A crystal structure of t.th. hb8 o-acetylserine sulfhydrylase complexed with 4-methylvalerate 0.9546 5 303
1z7y-assembly1.cif.gz_A crystal structure of the arabidopsis thaliana o-acetylserine sulfhydrylase k46a mutant 0.9543 1 298
3fca-assembly1.cif.gz_A genetic incorporation of a metal-ion chelating amino acid into proteins as biophysical probe 0.9536 5 299
7n2t-assembly1.cif.gz_A-2 o-acetylserine sulfhydrylase from citrullus vulgaris in the internal aldimine state, with citrate bound 0.9535 1 302
ID Description Score Start End Superfamily
5b1iC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.97 42 143 3.40.50.1100
af_Q2G0V4_40_140_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9686 43 143 3.40.50.1100
af_K7L749_143_229_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9657 144 231 3.40.50.1100
3vc3B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.963 39 139 3.40.50.1100
af_K7L749_14_232_2.10.25.10 Mainly Beta;Ribbon;Laminin;Laminin 0.9599 10 233 2.10.25.10
ID Description Score Start End GO Terms
AF-A0A7Y4J7I4-F1-model_v4 deleted 0.9847 41 183
AF-A0A4Q3UJ25-F1-model_v4 Pyridoxal-phosphate dependent enzyme 0.982 142 303 GO:0006534
GO:0009069
GO:0044272
AF-A0A5C7VZ87-F1-model_v4 Pyridoxal-phosphate dependent enzyme 0.9795 136 304 GO:0006534
GO:0009069
GO:0044272
AF-A0A661PK96-F1-model_v4 Cysteine synthase A 0.9794 70 298 GO:0006534
GO:0009069
GO:0044272
AF-A0A0U1Q2S7-F1-model_v4 Cysteine synthase (EC 2.5.1.47) 0.9788 1 306 GO:0004124
GO:0006535

Map