F375673

General Info

Members Datasets Scaffolds Average Seq Length
268 212 246 374

Family's Representative Sequence

Representative Sequence 3300039438|Ga0436360_1093912|Ga0436360_1093912_605_1825
Length 406
Sequence VDARNKSGHDEQNRPALLMGEETMDFDLSEEQRLLKDSVERLVADQYDFEQRKRHMAEPDGFSAALWSQYAELGLLGLPFEESLGGFGGGVVEMMIVMEAFGRGLILEPFFATVVLGGGLVSRAGSDAQRAALIPGVAQGKLRLAFAHVERHSRWNLADVATTAREQDGGWVLDGSKGVVLHGDSADKLLVTARVSGGQRDRDGIGLFLVDGGAQGVSRRGYPTQDGLRAAEVTLAGARAEPLGEPGAALPVVERVVDSAIAALCAEAVGVMAAMQETTLEYLKTRQQFGRPIGDFQALQHRAVDMFTAVEQARSMALFATVMAGEEDEAERRKSLSAAKVQIGRSGRHVGQEAIQLHGGIGVTMEYKVGHYFKRMTMIDQMFGDADHHLAALARAGGLFGEARAA

Samples

Sample ID Description Type Environment
1 2510065045 Paraburkholderia sprentiae WSM5005 Isolate Nodule
2 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
3 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
4 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
5 2643221561 Nocardioides sp. Root151 Isolate Unclassified
6 2643221615 Nocardioides sp. Root224 Isolate Unclassified
7 2643221641 Nocardioides sp. Root122 Isolate Unclassified
8 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
9 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
10 2643221696 Nocardioides sp. Root140 Isolate Unclassified
11 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
12 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
13 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
14 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
15 2739367898 Nocardioides sp. CF479 Isolate Unclassified
16 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
17 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
18 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
19 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
20 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
21 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
22 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
24 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
25 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
29 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
30 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
31 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
36 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
37 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
50 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
53 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
54 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
55 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
56 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
57 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
58 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
59 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
60 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
61 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
62 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
63 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
64 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
65 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
71 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
72 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
75 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
76 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
77 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
78 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
79 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
80 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
81 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
82 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
85 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
86 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
87 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
113 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
114 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
115 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
116 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
117 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
118 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
119 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
120 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
128 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
129 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
133 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
134 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
135 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
136 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
137 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
138 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
139 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
140 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
141 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
142 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
143 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
144 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
145 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
146 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
147 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
148 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
149 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
150 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
151 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
152 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
153 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
154 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
155 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
156 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
157 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
158 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
159 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
160 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
161 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
162 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
163 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
164 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
165 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
166 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
167 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
168 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
169 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
170 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
171 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
172 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
173 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
174 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
175 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
176 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
177 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
178 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
179 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
180 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
181 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
182 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
183 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
184 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
185 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
186 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
187 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
188 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
189 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
190 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
191 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
192 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
194 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
195 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
196 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
197 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
198 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
199 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
200 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
201 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
202 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
203 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
204 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
205 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
206 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
207 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
208 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
209 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
210 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
211 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
212 8055266321 Paraburkholderia rhynchosiae LMG 27174 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.42
Metatranscriptomes 0.37
Isolates 8.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.96
Nodule 2.61
Rhizoplane 4.85
Rhizosphere 71.27
Stem 0
Stem Tuber 0
Unclassified 12.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10028483 3300003203 Bacteria 2128
2 Ga0065712_10099881 3300005290 Bacteria 2078
3 Ga0070677_10052645 3300005333 Bacteria 1652
4 Ga0070680_100097302 3300005336 Bacteria 2440
5 Ga0068868_100197628 3300005338 Bacteria 1675
6 Ga0070667_100000694 3300005367 Bacteria 32459
7 Ga0070709_10039131 3300005434 Bacteria 2908
8 Ga0070709_10125142 3300005434 Bacteria 1748
9 Ga0070714_100013636 3300005435 Bacteria 6517
10 Ga0070713_100045852 3300005436 Bacteria 3584
11 Ga0070710_10122179 3300005437 Bacteria 1577
12 Ga0070663_100014799 3300005455 Bacteria 5015
13 Ga0070678_100009267 3300005456 Bacteria 5953
14 Ga0070662_100041318 3300005457 Bacteria 3289
15 Ga0070681_10250476 3300005458 Bacteria 1684
16 Ga0070707_100148151 3300005468 Bacteria 2285
17 Ga0070698_100007474 3300005471 Bacteria 11823
18 Ga0070679_100427905 3300005530 Bacteria 1269
19 Ga0070697_100015476 3300005536 Bacteria 5988
20 Ga0070672_100134337 3300005543 Bacteria 2036
21 Ga0070686_100212108 3300005544 Bacteria 1394
22 Ga0070665_100013223 3300005548 Bacteria 8315
23 Ga0070665_100249260 3300005548 Bacteria 1777
24 Ga0070664_100400626 3300005564 Bacteria 1255
25 Ga0068857_100003023 3300005577 Bacteria 13896
26 Ga0068857_100084450 3300005577 Bacteria 2837
27 Ga0068854_100103525 3300005578 Bacteria 2137
28 Ga0068856_100114209 3300005614 Bacteria 2699
29 Ga0068859_100239333 3300005617 Bacteria 1904
30 Ga0068859_100360192 3300005617 Bacteria 1549
31 Ga0068861_100216362 3300005719 Bacteria 1617
32 Ga0068851_10099302 3300005834 Bacteria 1542
33 Ga0081455_10016088 3300005937 Bacteria 7235
34 Ga0081539_10007338 3300005985 Bacteria 10112
35 Ga0070717_10001183 3300006028 Bacteria 17670
36 Ga0075365_10012024 3300006038 Bacteria 5119
37 Ga0075365_10072289 3300006038 Bacteria 2323
38 Ga0075364_10003738 3300006051 Bacteria 8690
39 Ga0075364_10006314 3300006051 Bacteria 6963
40 Ga0075364_10016744 3300006051 Bacteria 4566
41 Ga0070712_100147706 3300006175 Bacteria 1801
42 Ga0075362_10049054 3300006177 Bacteria 1885
43 Ga0075367_10000987 3300006178 Bacteria 11650
44 Ga0075367_10003215 3300006178 Bacteria 7718
45 Ga0075366_10032397 3300006195 Bacteria 3076
46 Ga0075370_10032849 3300006353 Bacteria 2903
47 Ga0075370_10045316 3300006353 Bacteria 2487
48 Ga0075370_10120331 3300006353 Bacteria 1528
49 Ga0068871_100179944 3300006358 Bacteria 1816
50 Ga0075428_100000945 3300006844 Bacteria 30758
51 Ga0075428_100027767 3300006844 Bacteria 6261
52 Ga0075431_100000864 3300006847 Bacteria 26611
53 Ga0075431_100047267 3300006847 Bacteria 4437
54 Ga0075429_100128236 3300006880 Bacteria 2219
55 Ga0068865_100035347 3300006881 Bacteria 3359
56 Ga0075436_100106618 3300006914 Bacteria 1954
57 Ga0097620_100239329 3300006931 Bacteria 1904
58 Ga0097620_100360222 3300006931 Bacteria 1549
59 Ga0099825_1026928 3300006941 Bacteria 2996
60 Ga0105240_10171952 3300009093 Bacteria 2565
61 Ga0105240_10583865 3300009093 Bacteria 1232
62 Ga0111539_10014450 3300009094 Bacteria 9852
63 Ga0105245_10092000 3300009098 Bacteria 2792
64 Ga0105247_10079474 3300009101 Bacteria 2064
65 Ga0114129_10107632 3300009147 Bacteria 3850
66 Ga0105243_10065949 3300009148 Bacteria 2910
67 Ga0105242_10269079 3300009176 Bacteria 1543
68 Ga0105237_10013367 3300009545 Bacteria 8611
69 Ga0105237_10172922 3300009545 Bacteria 2160
70 Ga0105238_10248688 3300009551 Bacteria 1756
71 Ga0105249_10220993 3300009553 Bacteria 1864
72 Ga0105239_10002743 3300010375 Bacteria 22119
73 Ga0105246_10056968 3300011119 Bacteria 2703
74 Ga0157369_10018880 3300013105 Bacteria 7726
75 Ga0157369_10102134 3300013105 Bacteria 3056
76 Ga0163163_10031303 3300014325 Bacteria 5134
77 Ga0182008_10061106 3300014497 Bacteria 1857
78 Ga0157379_10335880 3300014968 Bacteria 1381
79 Ga0213875_10005009 3300021388 Bacteria 7184
80 Ga0213875_10041369 3300021388 Bacteria 2168
81 Ga0213871_10030684 3300021441 Bacteria 1400
82 Ga0224712_10008306 3300022467 Bacteria 3072
83 Ga0207656_10067721 3300025321 Bacteria 1581
84 Ga0207682_10007963 3300025893 Bacteria 4205
85 Ga0207710_10013793 3300025900 Bacteria 3402
86 Ga0207688_10060382 3300025901 Bacteria 2135
87 Ga0207645_10023963 3300025907 Bacteria 3961
88 Ga0207643_10040589 3300025908 Bacteria 2621
89 Ga0207705_10183235 3300025909 Bacteria 1581
90 Ga0207684_10066513 3300025910 Bacteria 3061
91 Ga0207671_10005311 3300025914 Bacteria 11937
92 Ga0207690_10124766 3300025932 Bacteria 1876
93 Ga0207706_10023900 3300025933 Bacteria 5483
94 Ga0207709_10121753 3300025935 Bacteria 1763
95 Ga0207669_10013970 3300025937 Bacteria 4010
96 Ga0207665_10096145 3300025939 Bacteria 2060
97 Ga0207691_10100300 3300025940 Bacteria 2584
98 Ga0207689_10118410 3300025942 Bacteria 2178
99 Ga0207640_10091980 3300025981 Bacteria 2103
100 Ga0207658_10012387 3300025986 Bacteria 5824
101 Ga0207678_10052656 3300026067 Bacteria 3510
102 Ga0207641_10113078 3300026088 Bacteria 2410
103 Ga0207674_10004244 3300026116 Bacteria 17292
104 Ga0207675_100201636 3300026118 Bacteria 1911
105 Ga0207683_10134834 3300026121 Bacteria 2222
106 Ga0207428_10030978 3300027907 Bacteria 4419
107 Ga0268266_10215349 3300028379 Bacteria 1763
108 Ga0265338_10020217 3300028800 Bacteria 7015
109 Ga0265330_10014464 3300031235 Bacteria 3662
110 Ga0265325_10009401 3300031241 Bacteria 5705
111 Ga0265340_10024359 3300031247 Bacteria 3075
112 Ga0265331_10007968 3300031250 Bacteria 6064
113 Ga0265327_10014327 3300031251 Bacteria 5193
114 Ga0265316_10110008 3300031344 Bacteria 2087
115 Ga0265342_10028468 3300031712 Bacteria 3480
116 Ga0265342_10034141 3300031712 Bacteria 3122
117 Ga0307516_10003681 3300031730 Bacteria 19491
118 Ga0307516_10006027 3300031730 Bacteria 14331
119 Ga0307414_10088997 3300032004 Bacteria 2287
120 Ga0373947_0029637 3300035725 Bacteria 3212
121 Ga0373947_0041394 3300035725 Bacteria 2747
122 Ga0373947_0277079 3300035725 Bacteria 1114
123 Ga0373937_0041313 3300036401 Bacteria 4206
124 Ga0373925_0078131 3300037068 Bacteria 2513
125 Ga0373925_0086026 3300037068 Bacteria 2397
126 Ga0395899_0000005 3300037312 Bacteria 772966
127 Ga0395900_0000090 3300037418 Bacteria 169213
128 Ga0395898_0000003 3300037466 Bacteria 772986
129 Ga0395905_0063436 3300037471 Bacteria 3457
130 Ga0436364_0157412 3300037853 Bacteria 3627
131 Ga0436364_0200832 3300037853 Bacteria 50854
132 Ga0436364_0270794 3300037853 Bacteria 3999
133 Ga0436364_0576664 3300037853 Bacteria 3514
134 Ga0436364_0589852 3300037853 Bacteria 3445
135 Ga0436364_0619236 3300037853 Bacteria 15878
136 Ga0436364_1233626 3300037853 Bacteria 5944
137 Ga0436364_1431024 3300037853 Bacteria 13023
138 Ga0395901_0000096 3300038443 Bacteria 118723
139 Ga0436365_1585909 3300039437 Bacteria 3733
140 Ga0436365_1662547 3300039437 Bacteria 1475
141 Ga0436360_0445963 3300039438 Bacteria 1709
142 Ga0436360_0801618 3300039438 Bacteria 2623
143 Ga0436360_1093168 3300039438 Bacteria 1162
144 Ga0436360_1093912 3300039438 Bacteria 3384
145 Ga0436360_1106309 3300039438 Bacteria 1749
146 Ga0436360_1165017 3300039438 Bacteria 1604
147 Ga0436361_0971629 3300039447 Bacteria 1567
148 Ga0439447_004784 3300041407 Bacteria 4607
149 Ga0439447_004876 3300041407 Bacteria 4547
150 Ga0439466_0020876 3300041411 Bacteria 2329
151 Ga0439465_0019307 3300041413 Bacteria 2131
152 Ga0439452_000118 3300042010 Bacteria 61636
153 Ga0450907_001176 3300042146 Bacteria 5923
154 Ga0451577_0347443 3300042876 Bacteria 1346
155 Ga0466969_0008818 3300044656 Bacteria 5346
156 Ga0466969_0070762 3300044656 Bacteria 1678
157 Ga0466965_0027701 3300044683 Bacteria 2751
158 Ga0466965_0065603 3300044683 Bacteria 1819
159 Ga0466965_0099546 3300044683 Bacteria 1486
160 Ga0466966_0000033 3300044684 Bacteria 101862
161 Ga0466966_0020303 3300044684 Bacteria 4371
162 Ga0466961_0001363 3300044693 Bacteria 15069
163 Ga0466961_0143560 3300044693 Bacteria 1493
164 Ga0466963_0044144 3300044694 Bacteria 2934
165 Ga0466964_0022217 3300044706 Bacteria 2459
166 Ga0466968_0011541 3300044735 Bacteria 3444
167 Ga0466970_0025571 3300044765 Bacteria 3091
168 Ga0466970_0085071 3300044765 Bacteria 1713
169 Ga0466957_0083347 3300044842 Bacteria 1994
170 Ga0466959_0225766 3300045049 Bacteria 1297
171 Ga0466958_0016259 3300045836 Bacteria 4280
172 Ga0466958_0022356 3300045836 Bacteria 3703
173 Ga0466967_0017027 3300045976 Bacteria 5752
174 Ga0466967_0017378 3300045976 Bacteria 5709
175 Ga0495592_0137424 3300046454 Bacteria 1703
176 Ga0495651_0022798 3300046462 Bacteria 4868
177 Ga0495580_0019046 3300046472 Bacteria 5103
178 Ga0495664_0001374 3300046477 Bacteria 12857
179 Ga0495585_0020232 3300046492 Bacteria 3829
180 Ga0495607_0000127 3300046501 Bacteria 80830
181 Ga0495608_0110370 3300046511 Bacteria 1768
182 Ga0495644_0000567 3300046523 Bacteria 15510
183 Ga0495587_0031973 3300046536 Bacteria 3183
184 Ga0495597_0009192 3300046542 Bacteria 4899
185 Ga0495667_0143885 3300046559 Bacteria 1536
186 Ga0495656_0011862 3300046615 Bacteria 3205
187 Ga0495656_0025432 3300046615 Bacteria 2347
188 Ga0495611_0000166 3300046648 Bacteria 47251
189 Ga0495599_0007989 3300046678 Bacteria 6419
190 Ga0495623_0010604 3300046679 Bacteria 5964
191 Ga0495646_0027588 3300046680 Bacteria 3561
192 Ga0495624_0090839 3300046690 Bacteria 1884
193 Ga0495600_0047999 3300046809 Bacteria 2785
194 Ga0495674_0014708 3300047319 Bacteria 7323
195 Ga0495687_000094 3300047443 Bacteria 136181
196 Ga0495675_0024880 3300047444 Bacteria 3818
197 Ga0495677_0000073 3300047445 Bacteria 51082
198 Ga0495684_0077920 3300047471 Bacteria 2515
199 Ga0495684_0220152 3300047471 Bacteria 1392
200 Ga0495602_0000537 3300048088 Bacteria 35250
201 Ga0496104_0002066 3300048907 Bacteria 17441
202 Ga0496105_0006084 3300048908 Bacteria 9236
203 Ga0496105_0156558 3300048908 Bacteria 1871
204 Ga0496108_0001365 3300048911 Bacteria 19198
205 Ga0496109_0005867 3300048912 Bacteria 10299
206 Ga0496110_0032542 3300048913 Bacteria 4504
207 Ga0496110_0260576 3300048913 Bacteria 1578
208 Ga0496111_0000226 3300048914 Bacteria 26937
209 Ga0496111_0034536 3300048914 Bacteria 3611
210 Ga0496112_0007460 3300048915 Bacteria 9712
211 Ga0496113_0004899 3300048916 Bacteria 8290
212 Ga0496114_0150357 3300048917 Bacteria 2020
213 Ga0496115_0087317 3300048918 Bacteria 2545
214 Ga0496119_0006362 3300048922 Bacteria 10979
215 Ga0496122_0078541 3300048925 Bacteria 2311
216 Ga0496123_0063326 3300048926 Bacteria 2364
217 Ga0496126_0008814 3300048929 Bacteria 10817
218 Ga0495682_0003357 3300049460 Bacteria 7145
219 Ga0501037_0020184 3300049573 Bacteria 4921
220 Ga0501038_0048239 3300049574 Bacteria 3686
221 Ga0501039_0074684 3300049575 Bacteria 2635
222 Ga0501067_0018839 3300049583 Bacteria 3820
223 Ga0501076_0237099 3300049592 Bacteria 1492
224 Ga0501083_0054357 3300049744 Bacteria 2687
225 Ga0501083_0057248 3300049744 Bacteria 2610
226 nmdc:mga00v17_193165_c1 3300050491 Bacteria 1315
227 nmdc:mga00v17_42844_c1 3300050491 Bacteria 2724
228 nmdc:mga00v17_5602_c1 3300050491 Bacteria 6621
229 nmdc:mga00v17_8789_c1 3300050491 Bacteria 5441
230 nmdc:mga0yw44_133643_c1 3300050492 Bacteria 1608
231 nmdc:mga0yw44_67208_c1 3300050492 Bacteria 2215
232 nmdc:mga06z11_75596_c1 3300050494 Bacteria 1794
233 nmdc:mga07m45_26164_c1 3300050496 Bacteria 3206
234 nmdc:mga05p37_267912_c1 3300050507 Bacteria 2042
235 nmdc:mga05p37_4104_c1 3300050507 Bacteria 17023
236 nmdc:mga09592_122140_c1 3300050508 Bacteria 2238
237 nmdc:mga06r32_15_c1 3300050510 Bacteria 106010
238 nmdc:mga08y16_91_c3 3300050511 Bacteria 9883
239 Ga0495601_0011432 3300053077 Bacteria 5310
240 Ga0500641_0000118 3300053096 Bacteria 30420
241 Ga0500556_0002348 3300053104 Bacteria 6158
242 Ga0500593_003082 3300053117 Bacteria 6236
243 Ga0500568_0014210 3300053139 Bacteria 3603
244 Ga0501082_0000013 3300060353 Bacteria 119623
245 Ga0466962_0002046 3300061719 Bacteria 9540
246 Ga0466962_0064843 3300061719 Bacteria 1744

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035725 Ga0373947_0277079 Ga0373947_0277079_17_946 288
2 3300049592 Ga0501076_0237099 Ga0501076_0237099_14_1000 303
3 3300037471 Ga0395905_0063436 Ga0395905_0063436_434_1516 307
4 3300048918 Ga0496115_0087317 Ga0496115_0087317_553_1542 308
5 3300039438 Ga0436360_1093168 Ga0436360_1093168_125_1150 320
6 3300037853 Ga0436364_0157412 Ga0436364_0157412_1953_2984 322
7 3300048917 Ga0496114_0150357 Ga0496114_0150357_397_1494 326
8 3300014497 Ga0182008_10061106 Ga0182008_100611062 333
9 3300006051 Ga0075364_10003738 Ga0075364_100037388 335
10 3300006353 Ga0075370_10032849 Ga0075370_100328494 335
11 3300050491 nmdc:mga00v17_5602_c1 nmdc:mga00v17_5602_c1_1610_2755 335
12 3300050496 nmdc:mga07m45_26164_c1 nmdc:mga07m45_26164_c1_117_1262 335
13 3300013105 Ga0157369_10102134 Ga0157369_101021342 336
14 3300042146 Ga0450907_001176 Ga0450907_001176_3995_5137 337
15 3300048914 Ga0496111_0034536 Ga0496111_0034536_2305_3402 337
16 3300050492 nmdc:mga0yw44_133643_c1 nmdc:mga0yw44_133643_c1_375_1472 337
17 iso_pu_bacteria 2643221697 2644539752 337
18 3300049583 Ga0501067_0018839 Ga0501067_0018839_408_1505 338
19 3300035725 Ga0373947_0041394 Ga0373947_0041394_1546_2703 339
20 3300037068 Ga0373925_0086026 Ga0373925_0086026_1094_2251 339
21 3300039438 Ga0436360_0801618 Ga0436360_0801618_554_1690 340
22 iso_pu_bacteria 2643221561 2643827602 340
23 3300005614 Ga0068856_100114209 Ga0068856_1001142092 341
24 3300037068 Ga0373925_0078131 Ga0373925_0078131_224_1384 341
25 3300044765 Ga0466970_0085071 Ga0466970_0085071_34_1179 342
26 3300048925 Ga0496122_0078541 Ga0496122_0078541_101_1243 343
27 3300048926 Ga0496123_0063326 Ga0496123_0063326_123_1265 343
28 3300046559 Ga0495667_0143885 Ga0495667_0143885_279_1427 344
29 3300047471 Ga0495684_0220152 Ga0495684_0220152_10_1158 344
30 iso_pu_bacteria 2643221696 2644534844 344
31 3300046454 Ga0495592_0137424 Ga0495592_0137424_13_1179 345
32 3300046462 Ga0495651_0022798 Ga0495651_0022798_930_2090 345
33 3300046477 Ga0495664_0001374 Ga0495664_0001374_6932_8092 345
34 3300046511 Ga0495608_0110370 Ga0495608_0110370_121_1281 345
35 3300046536 Ga0495587_0031973 Ga0495587_0031973_1970_3130 345
36 3300046678 Ga0495599_0007989 Ga0495599_0007989_3898_5058 345
37 3300046679 Ga0495623_0010604 Ga0495623_0010604_914_2074 345
38 3300046680 Ga0495646_0027588 Ga0495646_0027588_1946_3106 345
39 3300046809 Ga0495600_0047999 Ga0495600_0047999_52_1212 345
40 3300047319 Ga0495674_0014708 Ga0495674_0014708_2166_3326 345
41 3300047444 Ga0495675_0024880 Ga0495675_0024880_1604_2764 345
42 3300047471 Ga0495684_0077920 Ga0495684_0077920_251_1411 345
43 3300048088 Ga0495602_0000537 Ga0495602_0000537_1123_2283 345
44 3300053077 Ga0495601_0011432 Ga0495601_0011432_2058_3218 345
45 3300005834 Ga0068851_10099302 Ga0068851_100993021 346
46 3300025321 Ga0207656_10067721 Ga0207656_100677212 346
47 3300037853 Ga0436364_0589852 Ga0436364_0589852_1623_2753 347
48 3300048913 Ga0496110_0260576 Ga0496110_0260576_210_1355 347
49 iso_pu_bacteria 2643221961 2645721866 347
50 iso_pu_bacteria 2643221962 2645724187 347
51 3300045976 Ga0466967_0017378 Ga0466967_0017378_2887_4035 348
52 iso_pu_bacteria 2643221641 2644229199 348
53 iso_pu_bacteria 2739367898 2740167140 348
54 iso_pu_bacteria 2857481737 2857484354 348
55 iso_pu_bacteria 2643221681 2644455453 349
56 3300025909 Ga0207705_10183235 Ga0207705_101832352 350
57 iso_pu_bacteria 2643221615 2644091499 350
58 iso_pu_bacteria 2643221657 2644321302 350
59 iso_pu_bacteria 2855386786 2855388408 350
60 3300009545 Ga0105237_10172922 Ga0105237_101729223 351
61 3300006051 Ga0075364_10006314 Ga0075364_100063143 352
62 3300049575 Ga0501039_0074684 Ga0501039_0074684_1373_2509 352
63 3300050491 nmdc:mga00v17_193165_c1 nmdc:mga00v17_193165_c1_69_1205 352
64 3300050491 nmdc:mga00v17_42844_c1 nmdc:mga00v17_42844_c1_886_2025 352
65 iso_pu_bacteria 2510065045 2510247062 352
66 iso_pu_bacteria 2512047030 2512352626 352
67 iso_pu_bacteria 2515154122 2515681166 352
68 iso_pu_bacteria 2551306416 2553004236 352
69 iso_pu_bacteria 2718217991 2719637917 352
70 iso_pu_bacteria 2902682994 2902686389 352
71 iso_pu_bacteria 2923510766 2923512075 352
72 iso_pu_bacteria 8055266321 8055271536 352
73 3300006038 Ga0075365_10072289 Ga0075365_100722892 353
74 3300006178 Ga0075367_10003215 Ga0075367_100032153 353
75 3300050492 nmdc:mga0yw44_67208_c1 nmdc:mga0yw44_67208_c1_313_1452 353
76 3300025939 Ga0207665_10096145 Ga0207665_100961452 354
77 3300026118 Ga0207675_100201636 Ga0207675_1002016362 354
78 3300031247 Ga0265340_10024359 Ga0265340_100243593 354
79 3300031712 Ga0265342_10028468 Ga0265342_100284683 354
80 3300044683 Ga0466965_0065603 Ga0466965_0065603_209_1351 354
81 3300044683 Ga0466965_0099546 Ga0466965_0099546_76_1221 354
82 3300044693 Ga0466961_0143560 Ga0466961_0143560_32_1177 354
83 3300045976 Ga0466967_0017027 Ga0466967_0017027_4191_5336 354
84 3300053104 Ga0500556_0002348 Ga0500556_0002348_2462_3604 354
85 3300053117 Ga0500593_003082 Ga0500593_003082_4102_5244 354
86 3300061719 Ga0466962_0064843 Ga0466962_0064843_55_1200 354
87 3300032004 Ga0307414_10088997 Ga0307414_100889972 355
88 3300041407 Ga0439447_004784 Ga0439447_004784_1126_2256 355
89 3300041407 Ga0439447_004876 Ga0439447_004876_2352_3482 355
90 3300041411 Ga0439466_0020876 Ga0439466_0020876_410_1540 355
91 3300042010 Ga0439452_000118 Ga0439452_000118_1095_2225 355
92 iso_pu_bacteria 2876808645 2876817784 355
93 3300009093 Ga0105240_10583865 Ga0105240_105838652 356
94 3300013105 Ga0157369_10018880 Ga0157369_100188803 356
95 3300031730 Ga0307516_10006027 Ga0307516_1000602711 356
96 3300037312 Ga0395899_0000005 Ga0395899_0000005_68419_69552 356
97 3300037418 Ga0395900_0000090 Ga0395900_0000090_99662_100795 356
98 3300037466 Ga0395898_0000003 Ga0395898_0000003_68419_69552 356
99 3300037853 Ga0436364_1233626 Ga0436364_1233626_4030_5163 356
100 3300038443 Ga0395901_0000096 Ga0395901_0000096_64710_65843 356
101 3300044656 Ga0466969_0008818 Ga0466969_0008818_266_1399 356
102 3300044656 Ga0466969_0070762 Ga0466969_0070762_92_1225 356
103 3300044683 Ga0466965_0027701 Ga0466965_0027701_1005_2138 356
104 3300044684 Ga0466966_0000033 Ga0466966_0000033_64787_65920 356
105 3300044684 Ga0466966_0020303 Ga0466966_0020303_2626_3759 356
106 3300044693 Ga0466961_0001363 Ga0466961_0001363_229_1362 356
107 3300044694 Ga0466963_0044144 Ga0466963_0044144_203_1336 356
108 3300044706 Ga0466964_0022217 Ga0466964_0022217_1179_2312 356
109 3300044735 Ga0466968_0011541 Ga0466968_0011541_655_1788 356
110 3300044765 Ga0466970_0025571 Ga0466970_0025571_780_1913 356
111 3300044842 Ga0466957_0083347 Ga0466957_0083347_246_1379 356
112 3300045049 Ga0466959_0225766 Ga0466959_0225766_127_1260 356
113 3300045836 Ga0466958_0016259 Ga0466958_0016259_2267_3400 356
114 3300045836 Ga0466958_0022356 Ga0466958_0022356_1111_2244 356
115 3300046472 Ga0495580_0019046 Ga0495580_0019046_3461_4594 356
116 3300049573 Ga0501037_0020184 Ga0501037_0020184_1213_2346 356
117 3300049574 Ga0501038_0048239 Ga0501038_0048239_2467_3600 356
118 3300061719 Ga0466962_0002046 Ga0466962_0002046_4785_5918 356
119 iso_pu_bacteria 2904690495 2904695734 356
120 3300014325 Ga0163163_10031303 Ga0163163_100313035 357
121 3300035725 Ga0373947_0029637 Ga0373947_0029637_1013_2152 357
122 3300037853 Ga0436364_0619236 Ga0436364_0619236_11436_12575 357
123 3300042876 Ga0451577_0347443 Ga0451577_0347443_138_1274 357
124 3300048907 Ga0496104_0002066 Ga0496104_0002066_14588_15727 357
125 3300048908 Ga0496105_0006084 Ga0496105_0006084_2176_3315 357
126 3300048911 Ga0496108_0001365 Ga0496108_0001365_10252_11391 357
127 3300048912 Ga0496109_0005867 Ga0496109_0005867_6941_8080 357
128 3300048913 Ga0496110_0032542 Ga0496110_0032542_1244_2383 357
129 3300048914 Ga0496111_0000226 Ga0496111_0000226_15548_16687 357
130 3300048915 Ga0496112_0007460 Ga0496112_0007460_1242_2381 357
131 3300048916 Ga0496113_0004899 Ga0496113_0004899_5816_6955 357
132 3300021388 Ga0213875_10005009 Ga0213875_100050093 358
133 3300021388 Ga0213875_10041369 Ga0213875_100413693 358
134 3300037853 Ga0436364_0200832 Ga0436364_0200832_7960_9129 358
135 3300037853 Ga0436364_0270794 Ga0436364_0270794_944_2083 358
136 3300037853 Ga0436364_1431024 Ga0436364_1431024_723_1862 358
137 3300039437 Ga0436365_1662547 Ga0436365_1662547_239_1378 358
138 3300049744 Ga0501083_0054357 Ga0501083_0054357_844_2046 358
139 3300053096 Ga0500641_0000118 Ga0500641_0000118_11927_13066 358
140 3300005434 Ga0070709_10125142 Ga0070709_101251422 359
141 3300005435 Ga0070714_100013636 Ga0070714_1000136366 359
142 3300005437 Ga0070710_10122179 Ga0070710_101221791 359
143 3300005468 Ga0070707_100148151 Ga0070707_1001481512 359
144 3300005548 Ga0070665_100013223 Ga0070665_1000132234 359
145 3300006038 Ga0075365_10012024 Ga0075365_100120245 359
146 3300006051 Ga0075364_10016744 Ga0075364_100167444 359
147 3300009093 Ga0105240_10171952 Ga0105240_101719522 359
148 3300037853 Ga0436364_0576664 Ga0436364_0576664_707_1867 359
149 3300039438 Ga0436360_1093912 Ga0436360_1093912_605_1825 359
150 3300039438 Ga0436360_1106309 Ga0436360_1106309_173_1318 359
151 3300039447 Ga0436361_0971629 Ga0436361_0971629_343_1485 359
152 3300041413 Ga0439465_0019307 Ga0439465_0019307_653_1807 359
153 3300046492 Ga0495585_0020232 Ga0495585_0020232_1251_2402 359
154 3300046501 Ga0495607_0000127 Ga0495607_0000127_21541_22692 359
155 3300046523 Ga0495644_0000567 Ga0495644_0000567_8156_9307 359
156 3300046615 Ga0495656_0011862 Ga0495656_0011862_172_1323 359
157 3300046648 Ga0495611_0000166 Ga0495611_0000166_25099_26250 359
158 3300046690 Ga0495624_0090839 Ga0495624_0090839_268_1440 359
159 3300047445 Ga0495677_0000073 Ga0495677_0000073_40056_41207 359
160 3300048908 Ga0496105_0156558 Ga0496105_0156558_195_1340 359
161 3300048929 Ga0496126_0008814 Ga0496126_0008814_786_1988 359
162 3300049460 Ga0495682_0003357 Ga0495682_0003357_5592_6743 359
163 3300050491 nmdc:mga00v17_8789_c1 nmdc:mga00v17_8789_c1_2325_3479 359
164 3300005458 Ga0070681_10250476 Ga0070681_102504762 360
165 3300005530 Ga0070679_100427905 Ga0070679_1004279051 360
166 3300005548 Ga0070665_100249260 Ga0070665_1002492601 360
167 3300006941 Ga0099825_1026928 Ga0099825_10269283 360
168 3300022467 Ga0224712_10008306 Ga0224712_100083062 360
169 3300028379 Ga0268266_10215349 Ga0268266_102153492 360
170 3300028800 Ga0265338_10020217 Ga0265338_100202172 360
171 3300048922 Ga0496119_0006362 Ga0496119_0006362_4427_5575 360
172 3300049744 Ga0501083_0057248 Ga0501083_0057248_224_1369 360
173 3300060353 Ga0501082_0000013 Ga0501082_0000013_107319_108464 360
174 3300005338 Ga0068868_100197628 Ga0068868_1001976281 361
175 3300005367 Ga0070667_100000694 Ga0070667_10000069410 361
176 3300005455 Ga0070663_100014799 Ga0070663_1000147992 361
177 3300005457 Ga0070662_100041318 Ga0070662_1000413183 361
178 3300005536 Ga0070697_100015476 Ga0070697_1000154762 361
179 3300005577 Ga0068857_100003023 Ga0068857_10000302311 361
180 3300005578 Ga0068854_100103525 Ga0068854_1001035252 361
181 3300005617 Ga0068859_100239333 Ga0068859_1002393332 361
182 3300006177 Ga0075362_10049054 Ga0075362_100490542 361
183 3300006178 Ga0075367_10000987 Ga0075367_100009876 361
184 3300006195 Ga0075366_10032397 Ga0075366_100323972 361
185 3300006353 Ga0075370_10045316 Ga0075370_100453162 361
186 3300006353 Ga0075370_10120331 Ga0075370_101203312 361
187 3300006881 Ga0068865_100035347 Ga0068865_1000353472 361
188 3300006931 Ga0097620_100239329 Ga0097620_1002393292 361
189 3300009098 Ga0105245_10092000 Ga0105245_100920003 361
190 3300009545 Ga0105237_10013367 Ga0105237_100133676 361
191 3300010375 Ga0105239_10002743 Ga0105239_1000274312 361
192 3300014968 Ga0157379_10335880 Ga0157379_103358802 361
193 3300025910 Ga0207684_10066513 Ga0207684_100665132 361
194 3300025914 Ga0207671_10005311 Ga0207671_100053116 361
195 3300025933 Ga0207706_10023900 Ga0207706_100239005 361
196 3300025981 Ga0207640_10091980 Ga0207640_100919802 361
197 3300025986 Ga0207658_10012387 Ga0207658_100123874 361
198 3300026067 Ga0207678_10052656 Ga0207678_100526562 361
199 3300026116 Ga0207674_10004244 Ga0207674_100042443 361
200 3300031730 Ga0307516_10003681 Ga0307516_1000368116 361
201 3300039437 Ga0436365_1585909 Ga0436365_1585909_1558_2709 361
202 3300046542 Ga0495597_0009192 Ga0495597_0009192_927_2075 361
203 3300047443 Ga0495687_000094 Ga0495687_000094_54597_55745 361
204 3300050494 nmdc:mga06z11_75596_c1 nmdc:mga06z11_75596_c1_57_1205 361
205 3300053139 Ga0500568_0014210 Ga0500568_0014210_1727_2896 361
206 3300003203 JGI25406J46586_10028483 JGI25406J46586_100284832 362
207 3300005290 Ga0065712_10099881 Ga0065712_100998811 362
208 3300005333 Ga0070677_10052645 Ga0070677_100526452 362
209 3300005336 Ga0070680_100097302 Ga0070680_1000973024 362
210 3300005434 Ga0070709_10039131 Ga0070709_100391312 362
211 3300005436 Ga0070713_100045852 Ga0070713_1000458524 362
212 3300005456 Ga0070678_100009267 Ga0070678_1000092672 362
213 3300005471 Ga0070698_100007474 Ga0070698_1000074741 362
214 3300005543 Ga0070672_100134337 Ga0070672_1001343372 362
215 3300005544 Ga0070686_100212108 Ga0070686_1002121081 362
216 3300005564 Ga0070664_100400626 Ga0070664_1004006261 362
217 3300005577 Ga0068857_100084450 Ga0068857_1000844502 362
218 3300005617 Ga0068859_100360192 Ga0068859_1003601922 362
219 3300005719 Ga0068861_100216362 Ga0068861_1002163621 362
220 3300005937 Ga0081455_10016088 Ga0081455_100160885 362
221 3300005985 Ga0081539_10007338 Ga0081539_100073388 362
222 3300006028 Ga0070717_10001183 Ga0070717_1000118314 362
223 3300006175 Ga0070712_100147706 Ga0070712_1001477062 362
224 3300006358 Ga0068871_100179944 Ga0068871_1001799442 362
225 3300006844 Ga0075428_100000945 Ga0075428_10000094523 362
226 3300006844 Ga0075428_100027767 Ga0075428_1000277674 362
227 3300006847 Ga0075431_100000864 Ga0075431_10000086417 362
228 3300006847 Ga0075431_100047267 Ga0075431_1000472673 362
229 3300006880 Ga0075429_100128236 Ga0075429_1001282362 362
230 3300006914 Ga0075436_100106618 Ga0075436_1001066182 362
231 3300006931 Ga0097620_100360222 Ga0097620_1003602222 362
232 3300009094 Ga0111539_10014450 Ga0111539_100144503 362
233 3300009101 Ga0105247_10079474 Ga0105247_100794742 362
234 3300009147 Ga0114129_10107632 Ga0114129_101076323 362
235 3300009148 Ga0105243_10065949 Ga0105243_100659494 362
236 3300009176 Ga0105242_10269079 Ga0105242_102690791 362
237 3300009551 Ga0105238_10248688 Ga0105238_102486881 362
238 3300009553 Ga0105249_10220993 Ga0105249_102209932 362
239 3300011119 Ga0105246_10056968 Ga0105246_100569682 362
240 3300021441 Ga0213871_10030684 Ga0213871_100306842 362
241 3300025893 Ga0207682_10007963 Ga0207682_100079633 362
242 3300025900 Ga0207710_10013793 Ga0207710_100137932 362
243 3300025901 Ga0207688_10060382 Ga0207688_100603822 362
244 3300025907 Ga0207645_10023963 Ga0207645_100239633 362
245 3300025908 Ga0207643_10040589 Ga0207643_100405892 362
246 3300025932 Ga0207690_10124766 Ga0207690_101247662 362
247 3300025935 Ga0207709_10121753 Ga0207709_101217532 362
248 3300025937 Ga0207669_10013970 Ga0207669_100139703 362
249 3300025940 Ga0207691_10100300 Ga0207691_101003002 362
250 3300025942 Ga0207689_10118410 Ga0207689_101184102 362
251 3300026088 Ga0207641_10113078 Ga0207641_101130782 362
252 3300026121 Ga0207683_10134834 Ga0207683_101348342 362
253 3300027907 Ga0207428_10030978 Ga0207428_100309782 362
254 3300031235 Ga0265330_10014464 Ga0265330_100144642 362
255 3300031241 Ga0265325_10009401 Ga0265325_100094014 362
256 3300031250 Ga0265331_10007968 Ga0265331_100079684 362
257 3300031251 Ga0265327_10014327 Ga0265327_100143272 362
258 3300031344 Ga0265316_10110008 Ga0265316_101100082 362
259 3300031712 Ga0265342_10034141 Ga0265342_100341413 362
260 3300036401 Ga0373937_0041313 Ga0373937_0041313_1068_2231 362
261 3300039438 Ga0436360_0445963 Ga0436360_0445963_143_1294 362
262 3300039438 Ga0436360_1165017 Ga0436360_1165017_252_1403 362
263 3300046615 Ga0495656_0025432 Ga0495656_0025432_763_1920 362
264 3300050507 nmdc:mga05p37_267912_c1 nmdc:mga05p37_267912_c1_306_1457 362
265 3300050507 nmdc:mga05p37_4104_c1 nmdc:mga05p37_4104_c1_1414_2571 362
266 3300050508 nmdc:mga09592_122140_c1 nmdc:mga09592_122140_c1_387_1544 362
267 3300050510 nmdc:mga06r32_15_c1 nmdc:mga06r32_15_c1_90021_91178 362
268 3300050511 nmdc:mga08y16_91_c3 nmdc:mga08y16_91_c3_6809_7966 362

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

250

398

0.94

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

262

379

0.91

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

145

236

0.88

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

29

141

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ukw-assembly1.cif.gz_A crystal structure of medium-chain acyl-coa dehydrogenase from thermus thermophilus hb8 0.8309 1 354
1egc-assembly1.cif.gz_D structure of t255e, e376g mutant of human medium chain acyl-coa dehydrogenase complexed with octanoyl-coa 0.8302 1 356
2a1t-assembly1.cif.gz_D structure of the human mcad:etf e165betaa complex 0.8286 1 356
7w0j-assembly1.cif.gz_A acyl-coa dehydrogenase, tfu_1647 0.825 4 354
3mdd-assembly1.cif.gz_A crystal structures of medium chain acyl-coa dehydrogenase from pig liver mitochondria with and without substrate 0.825 1 356
ID Description Score Start End Superfamily
4x28B02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9298 119 225 2.40.110.10
5iduB02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9264 122 230 2.40.110.10
af_Q6NWF0_171_282_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.916 123 228 2.40.110.10
4x28B02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9129 119 225 2.40.110.10
af_Q9D7B6_155_263_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9121 123 227 2.40.110.10
ID Description Score Start End GO Terms
AF-A0A2E9E5U9-F1-model_v4 Pimeloyl-CoA dehydrogenase small subunit 0.9771 1 237 GO:0003995
GO:0050660
AF-A0A354VMU1-F1-model_v4 deleted 0.9681 1 237
AF-A0A833G447-F1-model_v4 Pimeloyl-CoA dehydrogenase small subunit 0.9615 1 134 GO:0003995
GO:0050660
AF-A0A537VIA5-F1-model_v4 Acyl-CoA dehydrogenase family protein 0.9527 1 120 GO:0016627
GO:0050660
AF-A0A6N9BB21-F1-model_v4 Acyl-CoA dehydrogenase 0.9495 1 237 GO:0005886
GO:0016627
GO:0050660

Feature Viewer

pLDDT pTM Quality
80.28 0.69 Medium
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Predicted Structure (AlphaFold2)

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