F374187

General Info

Members Datasets Scaffolds Average Seq Length
266 175 532 133

Family's Representative Sequence

Representative Sequence 3300031995|Ga0307409_100042501|Ga0307409_1000425012
Length 154
Sequence VIAAEDHSPPLPDDAPVFVISVAAELAGMHAQTLRQYDRLGLVSPGRTRGGGRRYSPRDVALLREVQRLSQEDGVNLAGIKRIIDLESQVSALQARLHELIEELEIAERRRIAAETTLAASMQAGVQGGYRTDLVPMRPSTSALVVWRPRERKL

Samples

Sample ID Description Type Environment
1 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
39 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
61 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
62 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
82 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
83 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
84 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
85 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
86 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
92 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
93 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
94 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
98 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
99 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
100 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
101 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
102 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
106 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
107 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
108 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
115 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
120 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
121 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
122 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
125 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
126 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
134 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
144 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
145 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
146 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
147 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
148 2547132424 Nocardia nova SH22a Isolate Unclassified
149 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
150 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
151 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
152 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
153 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
154 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
155 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
156 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
157 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
158 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
159 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
160 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
161 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
162 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
163 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
164 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
165 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
166 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
167 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
168 2922554459 Rhodococcus sp. 66b Isolate Unclassified
169 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
170 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
171 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
172 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
173 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
174 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
175 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 84.21
Metatranscriptomes 4.89
Isolates 10.9

Biome Distribution

Category Percentage (%)
Aerial Root 0.38
Bulb 0
Endosphere 3.76
Nodule 0.38
Rhizoplane 10.9
Rhizosphere 72.18
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307409_100042501 3300031995 Bacteria 3405
2 rootH1_10214125 3300003323 Bacteria 1552
3 JGI25405J52794_10007246 3300003911 Bacteria 2042
4 Ga0070658_10096023 3300005327 Bacteria 2447
5 Ga0070683_100136290 3300005329 Bacteria 2325
6 Ga0070666_10129611 3300005335 Bacteria 1752
7 Ga0070682_100711277 3300005337 Bacteria 807
8 Ga0068868_100151620 3300005338 Bacteria 1909
9 Ga0068868_100386906 3300005338 Bacteria 1204
10 Ga0068868_100840061 3300005338 Bacteria 831
11 Ga0070660_100527511 3300005339 Bacteria 984
12 Ga0070689_100740240 3300005340 Bacteria 861
13 Ga0070668_100063606 3300005347 Bacteria 2860
14 Ga0070675_100290233 3300005354 Bacteria 1439
15 Ga0070674_101294677 3300005356 Bacteria 650
16 Ga0070667_100000324 3300005367 Bacteria 53403
17 Ga0070714_100030406 3300005435 Bacteria 4495
18 Ga0070714_101069742 3300005435 Bacteria 786
19 Ga0070713_100104063 3300005436 Bacteria 2464
20 Ga0070663_100441604 3300005455 Bacteria 1071
21 Ga0070678_102100509 3300005456 Bacteria 535
22 Ga0070685_10338076 3300005466 Bacteria 1026
23 Ga0070706_100532948 3300005467 Bacteria 1092
24 Ga0070699_100082435 3300005518 Bacteria 2804
25 Ga0070679_100657456 3300005530 Bacteria 991
26 Ga0070686_100641216 3300005544 Bacteria 841
27 Ga0070686_101146902 3300005544 Bacteria 644
28 Ga0070665_101611418 3300005548 Bacteria 657
29 Ga0068855_100197081 3300005563 Bacteria 2269
30 Ga0068857_100233987 3300005577 Bacteria 1681
31 Ga0068857_100819054 3300005577 Bacteria 890
32 Ga0068854_100832718 3300005578 Bacteria 806
33 Ga0068856_100009505 3300005614 Bacteria 9443
34 Ga0068856_100383384 3300005614 Bacteria 1425
35 Ga0068856_101230121 3300005614 Bacteria 765
36 Ga0070702_100427278 3300005615 Bacteria 955
37 Ga0068852_100056210 3300005616 Bacteria 3400
38 Ga0068859_100330559 3300005617 Bacteria 1618
39 Ga0081455_10000677 3300005937 Bacteria 44139
40 Ga0081538_10373909 3300005981 Bacteria 514
41 Ga0075364_10078880 3300006051 Bacteria 2176
42 Ga0070715_10357942 3300006163 Bacteria 799
43 Ga0075370_10019597 3300006353 Bacteria 3686
44 Ga0075370_10026638 3300006353 Bacteria 3204
45 Ga0097620_100330567 3300006931 Bacteria 1618
46 Ga0099795_10015301 3300007788 Bacteria 2399
47 Ga0105250_10190566 3300009092 Bacteria 863
48 Ga0105245_10528731 3300009098 Bacteria 1199
49 Ga0105245_11181326 3300009098 Bacteria 813
50 Ga0105247_10150767 3300009101 Bacteria 1532
51 Ga0105247_10156796 3300009101 Bacteria 1504
52 Ga0105247_10354823 3300009101 Bacteria 1032
53 Ga0105243_11578386 3300009148 Bacteria 682
54 Ga0105242_10491054 3300009176 Bacteria 1166
55 Ga0105237_10062832 3300009545 Bacteria 3712
56 Ga0105237_10809443 3300009545 Bacteria 944
57 Ga0105238_10031723 3300009551 Bacteria 5377
58 Ga0105238_10520449 3300009551 Bacteria 1192
59 Ga0105033_102347 3300009986 Bacteria 1564
60 Ga0105239_10065914 3300010375 Bacteria 3979
61 Ga0105239_10105503 3300010375 Bacteria 3121
62 Ga0105239_10843854 3300010375 Bacteria 1050
63 Ga0105246_10363488 3300011119 Bacteria 1190
64 Ga0157374_10553111 3300013296 Bacteria 1159
65 Ga0157375_10231570 3300013308 Bacteria 2006
66 Ga0163163_10179311 3300014325 Bacteria 2165
67 Ga0163163_11284027 3300014325 Bacteria 794
68 Ga0163163_12163667 3300014325 Bacteria 616
69 Ga0157377_11392743 3300014745 Bacteria 553
70 Ga0157376_10446599 3300014969 Bacteria 1260
71 Ga0197907_10949860 3300020069 Bacteria 845
72 Ga0197907_11255850 3300020069 Bacteria 680
73 Ga0206351_10618477 3300020077 Bacteria 1692
74 Ga0206350_10496393 3300020080 Bacteria 929
75 Ga0206350_10612684 3300020080 Bacteria 1539
76 Ga0206350_11552872 3300020080 Bacteria 2049
77 Ga0206354_10571966 3300020081 Bacteria 3404
78 Ga0206353_11908304 3300020082 Bacteria 4604
79 Ga0154015_1351932 3300020610 Bacteria 631
80 Ga0213873_10000060 3300021358 Bacteria 24158
81 Ga0213876_10020053 3300021384 Bacteria 3532
82 Ga0213876_10194814 3300021384 Bacteria 1077
83 Ga0224712_10012442 3300022467 Bacteria 2678
84 Ga0224712_10034561 3300022467 Bacteria 1860
85 Ga0224712_10063110 3300022467 Bacteria 1482
86 Ga0209051_1002909 3300025303 Bacteria 11746
87 Ga0209051_1013160 3300025303 Bacteria 3954
88 Ga0207688_11089726 3300025901 Bacteria 504
89 Ga0207647_10009587 3300025904 Bacteria 6873
90 Ga0207684_10447053 3300025910 Bacteria 1110
91 Ga0207684_11481026 3300025910 Bacteria 553
92 Ga0207657_10850020 3300025919 Bacteria 704
93 Ga0207652_10083287 3300025921 Bacteria 2800
94 Ga0207694_10430906 3300025924 Bacteria 1099
95 Ga0207694_11304294 3300025924 Bacteria 614
96 Ga0207687_10075113 3300025927 Bacteria 2425
97 Ga0207664_10089555 3300025929 Bacteria 2520
98 Ga0207664_10282542 3300025929 Bacteria 1456
99 Ga0207706_11339380 3300025933 Bacteria 590
100 Ga0207686_10254426 3300025934 Bacteria 1285
101 Ga0207661_10990283 3300025944 Bacteria 774
102 Ga0207661_11382125 3300025944 Bacteria 646
103 Ga0207667_10554575 3300025949 Bacteria 1162
104 Ga0207667_11077216 3300025949 Bacteria 788
105 Ga0207703_10958990 3300026035 Bacteria 820
106 Ga0207639_10019339 3300026041 Bacteria 4856
107 Ga0207702_10142236 3300026078 Bacteria 2172
108 Ga0207702_10747131 3300026078 Bacteria 966
109 Ga0207674_10084306 3300026116 Bacteria 3176
110 Ga0207674_10133143 3300026116 Bacteria 2449
111 Ga0207698_10038641 3300026142 Bacteria 3528
112 Ga0307511_10000018 3300030521 Bacteria 118259
113 Ga0307513_10024209 3300031456 Bacteria 7068
114 Ga0307509_10441084 3300031507 Bacteria 998
115 Ga0307514_10160255 3300031649 Bacteria 1491
116 Ga0307413_10044873 3300031824 Bacteria 2616
117 Ga0307413_11285718 3300031824 Bacteria 639
118 Ga0307518_10000640 3300031838 Bacteria 26295
119 Ga0307518_10047267 3300031838 Bacteria 3129
120 Ga0307406_10936345 3300031901 Bacteria 740
121 Ga0307409_100248259 3300031995 Bacteria 1625
122 Ga0307409_100341035 3300031995 Bacteria 1410
123 Ga0307416_100026706 3300032002 Bacteria 4260
124 Ga0307416_100359767 3300032002 Bacteria 1477
125 Ga0307416_100465914 3300032002 Bacteria 1320
126 Ga0307416_100725307 3300032002 Bacteria 1085
127 Ga0307416_102235590 3300032002 Bacteria 648
128 Ga0307414_10705439 3300032004 Bacteria 914
129 Ga0307414_11352314 3300032004 Bacteria 661
130 Ga0307415_100072909 3300032126 Bacteria 2420
131 Ga0307415_100650850 3300032126 Bacteria 945
132 Ga0307415_100677897 3300032126 Bacteria 927
133 Ga0307507_10064692 3300033179 Bacteria 3372
134 Ga0307507_10548755 3300033179 Bacteria 610
135 Ga0373939_0298404 3300035114 Bacteria 642
136 Ga0373931_0365678 3300035691 Bacteria 906
137 Ga0436364_0917084 3300037853 Bacteria 35937
138 Ga0395901_1883028 3300038443 Bacteria 546
139 Ga0436365_0274640 3300039437 Bacteria 5151
140 Ga0436365_0982656 3300039437 Bacteria 5966
141 Ga0436365_1344081 3300039437 Bacteria 676
142 Ga0436365_1868123 3300039437 Bacteria 553
143 Ga0436360_0510722 3300039438 Bacteria 643
144 Ga0436362_0167602 3300039453 Bacteria 25568
145 Ga0451797_1147167 3300041453 Bacteria 981
146 Ga0439448_0010831 3300042005 Bacteria 2710
147 Ga0466969_0008972 3300044656 Bacteria 5300
148 Ga0466969_0018737 3300044656 Bacteria 3604
149 Ga0466969_0093331 3300044656 Bacteria 1424
150 Ga0466969_0595332 3300044656 Bacteria 507
151 Ga0466965_0524028 3300044683 Bacteria 667
152 Ga0466966_0010521 3300044684 Bacteria 6148
153 Ga0466966_0013358 3300044684 Bacteria 5435
154 Ga0466966_0171787 3300044684 Bacteria 1317
155 Ga0466966_0198431 3300044684 Bacteria 1215
156 Ga0466966_0199541 3300044684 Bacteria 1211
157 Ga0466966_0430190 3300044684 Bacteria 793
158 Ga0466966_0544700 3300044684 Bacteria 698
159 Ga0466966_0630523 3300044684 Bacteria 645
160 Ga0466966_0664518 3300044684 Bacteria 628
161 Ga0466961_0025125 3300044693 Bacteria 3833
162 Ga0466961_0029163 3300044693 Bacteria 3548
163 Ga0466961_0051439 3300044693 Bacteria 2631
164 Ga0466961_0100215 3300044693 Bacteria 1825
165 Ga0466961_0118224 3300044693 Bacteria 1665
166 Ga0466963_0292429 3300044694 Bacteria 1145
167 Ga0466971_0033342 3300044719 Bacteria 2308
168 Ga0466971_0069339 3300044719 Bacteria 1600
169 Ga0466971_0710585 3300044719 Bacteria 506
170 Ga0466968_0090045 3300044735 Bacteria 1358
171 Ga0466970_0009952 3300044765 Bacteria 4815
172 Ga0466970_0340166 3300044765 Bacteria 850
173 Ga0466970_0368155 3300044765 Bacteria 817
174 Ga0466957_0094714 3300044842 Bacteria 1875
175 Ga0466957_1193858 3300044842 Bacteria 550
176 Ga0466960_0074563 3300044901 Bacteria 1696
177 Ga0466960_0250638 3300044901 Bacteria 983
178 Ga0466960_0545683 3300044901 Bacteria 683
179 Ga0466959_0283462 3300045049 Bacteria 1137
180 Ga0466959_0284214 3300045049 Bacteria 1135
181 Ga0466959_1068299 3300045049 Bacteria 537
182 Ga0466958_0253804 3300045836 Bacteria 1125
183 Ga0466958_0627494 3300045836 Bacteria 699
184 Ga0466967_0086763 3300045976 Bacteria 2836
185 Ga0466967_0162474 3300045976 Bacteria 2097
186 Ga0466967_0484379 3300045976 Bacteria 1212
187 Ga0466967_1472542 3300045976 Bacteria 678
188 Ga0495662_0632517 3300046476 Bacteria 523
189 Ga0495607_0067230 3300046501 Bacteria 2014
190 Ga0495630_0415298 3300046517 Bacteria 1031
191 Ga0495668_0000237 3300046616 Bacteria 78532
192 Ga0495672_0232512 3300047320 Bacteria 904
193 Ga0495683_0000511 3300047323 Bacteria 29848
194 Ga0496101_0328487 3300048904 Bacteria 1200
195 Ga0496101_0703492 3300048904 Bacteria 798
196 Ga0496102_0000465 3300048905 Bacteria 45009
197 Ga0496102_0443088 3300048905 Bacteria 1219
198 Ga0496102_0553581 3300048905 Bacteria 1073
199 Ga0496103_0092025 3300048906 Bacteria 1914
200 Ga0496103_0176925 3300048906 Bacteria 1371
201 Ga0496104_0358190 3300048907 Bacteria 1371
202 Ga0496106_0027985 3300048909 Bacteria 4197
203 Ga0496106_0130731 3300048909 Bacteria 1969
204 Ga0496107_0085958 3300048910 Bacteria 2295
205 Ga0496107_0276199 3300048910 Bacteria 1250
206 Ga0496108_0017400 3300048911 Bacteria 5882
207 Ga0496108_0314366 3300048911 Bacteria 1365
208 Ga0496108_0513220 3300048911 Bacteria 1046
209 Ga0496108_0612186 3300048911 Bacteria 949
210 Ga0496109_0037256 3300048912 Bacteria 4394
211 Ga0496109_0117279 3300048912 Bacteria 2478
212 Ga0496109_0643870 3300048912 Bacteria 997
213 Ga0496110_0287971 3300048913 Bacteria 1496
214 Ga0496110_0433169 3300048913 Bacteria 1198
215 Ga0496110_0970936 3300048913 Bacteria 757
216 Ga0496111_0016444 3300048914 Bacteria 5096
217 Ga0496112_1056095 3300048915 Bacteria 731
218 Ga0496112_1555311 3300048915 Bacteria 575
219 Ga0496113_0406822 3300048916 Bacteria 1093
220 Ga0496114_0005136 3300048917 Bacteria 10209
221 Ga0496114_0034096 3300048917 Bacteria 4197
222 Ga0496121_0020027 3300048924 Bacteria 6651
223 Ga0496122_0487564 3300048925 Bacteria 602
224 Ga0496125_0017298 3300048928 Bacteria 6883
225 Ga0501318_071989 3300049534 Bacteria 547
226 Ga0501034_0112137 3300049571 Bacteria 2718
227 Ga0501042_0038639 3300049578 Bacteria 3389
228 Ga0501047_0005176 3300049581 Bacteria 12239
229 Ga0501069_0020703 3300049585 Bacteria 3566
230 Ga0501070_0364509 3300049586 Bacteria 1172
231 Ga0501075_0208643 3300049591 Bacteria 1490
232 nmdc:mga03n38_17365_c1 3300050490 Bacteria 2817
233 nmdc:mga07m45_142515_c1 3300050496 Bacteria 1388
234 nmdc:mga07m45_49648_c1 3300050496 Bacteria 2362
235 Ga0500562_089341 3300053108 Bacteria 836
236 Ga0500627_0114470 3300053158 Bacteria 1215
237 Ga0466962_0225510 3300061719 Bacteria 918
238 2548699528 2547132424 Bacteria 8348532
239 2566991654 2565956761 Bacteria 6601618
240 2586065506 2585427649 Bacteria 9053857
241 2623497940 2622736605 Bacteria 4992138
242 2729906513 2728369276 Bacteria 5610032
243 2738887965 2738541308 Bacteria 7020677
244 2739146905 2738541356 Bacteria 5935017
245 2791911052 2791354901 Bacteria 8322202
246 2791917357 2791354901 Bacteria 8322202
247 2795781011 2795385470 Bacteria 8317180
248 2809593909 2808606522 Bacteria 9488490
249 2842135289 2842134933 Bacteria 5847019
250 2866616184 2866612099 Bacteria 7543886
251 2904541162 2904535858 Bacteria 6308016
252 2904767020 2904765812 Bacteria 5369154
253 2904773769 2904770941 Bacteria 5580202
254 2908814661 2908811453 Bacteria 5478616
255 2915773962 2915768154 Bacteria 8424322
256 2917744158 2917736166 Bacteria 9690793
257 2919420534 2919420072 Bacteria 5390363
258 2919433708 2919432681 Bacteria 5390474
259 2922560809 2922554459 Bacteria 6683962
260 2939586096 2939582691 Bacteria 7088898
261 2939746939 2939743619 Bacteria 5762299
262 2974319130 2974315732 Bacteria 4602776
263 2984527354 2984523437 Bacteria 4508481
264 3001122038 3001119090 Bacteria 3449530
265 8003314951 8003314358 Bacteria 10575343
266 8047716163 8047710418 Bacteria 11023148
267 Ga0307409_100042501
268 rootH1_10214125
269 JGI25405J52794_10007246
270 Ga0070658_10096023
271 Ga0070683_100136290
272 Ga0070666_10129611
273 Ga0070682_100711277
274 Ga0068868_100151620
275 Ga0068868_100386906
276 Ga0068868_100840061
277 Ga0070660_100527511
278 Ga0070689_100740240
279 Ga0070668_100063606
280 Ga0070675_100290233
281 Ga0070674_101294677
282 Ga0070667_100000324
283 Ga0070714_100030406
284 Ga0070714_101069742
285 Ga0070713_100104063
286 Ga0070663_100441604
287 Ga0070678_102100509
288 Ga0070685_10338076
289 Ga0070706_100532948
290 Ga0070699_100082435
291 Ga0070679_100657456
292 Ga0070686_100641216
293 Ga0070686_101146902
294 Ga0070665_101611418
295 Ga0068855_100197081
296 Ga0068857_100233987
297 Ga0068857_100819054
298 Ga0068854_100832718
299 Ga0068856_100009505
300 Ga0068856_100383384
301 Ga0068856_101230121
302 Ga0070702_100427278
303 Ga0068852_100056210
304 Ga0068859_100330559
305 Ga0081455_10000677
306 Ga0081538_10373909
307 Ga0075364_10078880
308 Ga0070715_10357942
309 Ga0075370_10019597
310 Ga0075370_10026638
311 Ga0097620_100330567
312 Ga0099795_10015301
313 Ga0105250_10190566
314 Ga0105245_10528731
315 Ga0105245_11181326
316 Ga0105247_10150767
317 Ga0105247_10156796
318 Ga0105247_10354823
319 Ga0105243_11578386
320 Ga0105242_10491054
321 Ga0105237_10062832
322 Ga0105237_10809443
323 Ga0105238_10031723
324 Ga0105238_10520449
325 Ga0105033_102347
326 Ga0105239_10065914
327 Ga0105239_10105503
328 Ga0105239_10843854
329 Ga0105246_10363488
330 Ga0157374_10553111
331 Ga0157375_10231570
332 Ga0163163_10179311
333 Ga0163163_11284027
334 Ga0163163_12163667
335 Ga0157377_11392743
336 Ga0157376_10446599
337 Ga0197907_10949860
338 Ga0197907_11255850
339 Ga0206351_10618477
340 Ga0206350_10496393
341 Ga0206350_10612684
342 Ga0206350_11552872
343 Ga0206354_10571966
344 Ga0206353_11908304
345 Ga0154015_1351932
346 Ga0213873_10000060
347 Ga0213876_10020053
348 Ga0213876_10194814
349 Ga0224712_10012442
350 Ga0224712_10034561
351 Ga0224712_10063110
352 Ga0209051_1002909
353 Ga0209051_1013160
354 Ga0207688_11089726
355 Ga0207647_10009587
356 Ga0207684_10447053
357 Ga0207684_11481026
358 Ga0207657_10850020
359 Ga0207652_10083287
360 Ga0207694_10430906
361 Ga0207694_11304294
362 Ga0207687_10075113
363 Ga0207664_10089555
364 Ga0207664_10282542
365 Ga0207706_11339380
366 Ga0207686_10254426
367 Ga0207661_10990283
368 Ga0207661_11382125
369 Ga0207667_10554575
370 Ga0207667_11077216
371 Ga0207703_10958990
372 Ga0207639_10019339
373 Ga0207702_10142236
374 Ga0207702_10747131
375 Ga0207674_10084306
376 Ga0207674_10133143
377 Ga0207698_10038641
378 Ga0307511_10000018
379 Ga0307513_10024209
380 Ga0307509_10441084
381 Ga0307514_10160255
382 Ga0307413_10044873
383 Ga0307413_11285718
384 Ga0307518_10000640
385 Ga0307518_10047267
386 Ga0307406_10936345
387 Ga0307409_100248259
388 Ga0307409_100341035
389 Ga0307416_100026706
390 Ga0307416_100359767
391 Ga0307416_100465914
392 Ga0307416_100725307
393 Ga0307416_102235590
394 Ga0307414_10705439
395 Ga0307414_11352314
396 Ga0307415_100072909
397 Ga0307415_100650850
398 Ga0307415_100677897
399 Ga0307507_10064692
400 Ga0307507_10548755
401 Ga0373939_0298404
402 Ga0373931_0365678
403 Ga0436364_0917084
404 Ga0395901_1883028
405 Ga0436365_0274640
406 Ga0436365_0982656
407 Ga0436365_1344081
408 Ga0436365_1868123
409 Ga0436360_0510722
410 Ga0436362_0167602
411 Ga0451797_1147167
412 Ga0439448_0010831
413 Ga0466969_0008972
414 Ga0466969_0018737
415 Ga0466969_0093331
416 Ga0466969_0595332
417 Ga0466965_0524028
418 Ga0466966_0010521
419 Ga0466966_0013358
420 Ga0466966_0171787
421 Ga0466966_0198431
422 Ga0466966_0199541
423 Ga0466966_0430190
424 Ga0466966_0544700
425 Ga0466966_0630523
426 Ga0466966_0664518
427 Ga0466961_0025125
428 Ga0466961_0029163
429 Ga0466961_0051439
430 Ga0466961_0100215
431 Ga0466961_0118224
432 Ga0466963_0292429
433 Ga0466971_0033342
434 Ga0466971_0069339
435 Ga0466971_0710585
436 Ga0466968_0090045
437 Ga0466970_0009952
438 Ga0466970_0340166
439 Ga0466970_0368155
440 Ga0466957_0094714
441 Ga0466957_1193858
442 Ga0466960_0074563
443 Ga0466960_0250638
444 Ga0466960_0545683
445 Ga0466959_0283462
446 Ga0466959_0284214
447 Ga0466959_1068299
448 Ga0466958_0253804
449 Ga0466958_0627494
450 Ga0466967_0086763
451 Ga0466967_0162474
452 Ga0466967_0484379
453 Ga0466967_1472542
454 Ga0495662_0632517
455 Ga0495607_0067230
456 Ga0495630_0415298
457 Ga0495668_0000237
458 Ga0495672_0232512
459 Ga0495683_0000511
460 Ga0496101_0328487
461 Ga0496101_0703492
462 Ga0496102_0000465
463 Ga0496102_0443088
464 Ga0496102_0553581
465 Ga0496103_0092025
466 Ga0496103_0176925
467 Ga0496104_0358190
468 Ga0496106_0027985
469 Ga0496106_0130731
470 Ga0496107_0085958
471 Ga0496107_0276199
472 Ga0496108_0017400
473 Ga0496108_0314366
474 Ga0496108_0513220
475 Ga0496108_0612186
476 Ga0496109_0037256
477 Ga0496109_0117279
478 Ga0496109_0643870
479 Ga0496110_0287971
480 Ga0496110_0433169
481 Ga0496110_0970936
482 Ga0496111_0016444
483 Ga0496112_1056095
484 Ga0496112_1555311
485 Ga0496113_0406822
486 Ga0496114_0005136
487 Ga0496114_0034096
488 Ga0496121_0020027
489 Ga0496122_0487564
490 Ga0496125_0017298
491 Ga0501318_071989
492 Ga0501034_0112137
493 Ga0501042_0038639
494 Ga0501047_0005176
495 Ga0501069_0020703
496 Ga0501070_0364509
497 Ga0501075_0208643
498 nmdc:mga03n38_17365_c1
499 nmdc:mga07m45_142515_c1
500 nmdc:mga07m45_49648_c1
501 Ga0500562_089341
502 Ga0500627_0114470
503 Ga0466962_0225510
504 2548699528
505 2566991654
506 2586065506
507 2623497940
508 2729906513
509 2738887965
510 2739146905
511 2791911052
512 2791917357
513 2795781011
514 2809593909
515 2842135289
516 2866616184
517 2904541162
518 2904767020
519 2904773769
520 2908814661
521 2915773962
522 2917744158
523 2919420534
524 2919433708
525 2922560809
526 2939586096
527 2939746939
528 2974319130
529 2984527354
530 3001122038
531 8003314951
532 8047716163

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00376

MerR

MerR family regulatory protein

19

55

0.97

PF13411

MerR_1

MerR HTH family regulatory protein

18

87

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4r24-assembly1.cif.gz_B complete dissection of b. subtilis nitrogen homeostatic circuitry 0.8994 18 95
7tea-assembly2.cif.gz_C crystal structure of s. aureus glnr-dna complex 0.8931 18 86
5i44-assembly4.cif.gz_E structure of raca-dna complex; p21 form 0.8811 18 81
5i44-assembly4.cif.gz_F-2 structure of raca-dna complex; p21 form 0.8625 18 80
5i44-assembly4.cif.gz_G-2 structure of raca-dna complex; p21 form 0.8621 17 81
ID Description Score Start End Superfamily
af_O06302_4_79_1.10.1660.10 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.9389 13 84 1.10.1660.10
af_P9WME7_10_96_1.10.1660.10 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.9213 17 83 1.10.1660.10
3hh0D01 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.9028 17 85 1.10.1660.10
4r22B00 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.9012 18 93 1.10.1660.10
3hh0B01 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.8911 17 85 1.10.1660.10
ID Description Score Start End GO Terms
AF-A0A2V7AZ72-F1-model_v4 MerR family transcriptional regulator 0.974 15 82 GO:0003677
GO:0003700
GO:0005829
AF-C0VYC1-F1-model_v4 Transcriptional regulator, MerR family 0.9632 17 105 GO:0003677
GO:0003700
AF-K9EXI2-F1-model_v4 HTH merR-type domain-containing protein 0.9566 17 108 GO:0003677
GO:0003700
AF-A0A1Q5Q134-F1-model_v4 HTH merR-type domain-containing protein 0.946 11 107 GO:0003677
GO:0003700
AF-A0A426TSN1-F1-model_v4 MerR family transcriptional regulator 0.9421 15 108 GO:0003677
GO:0003700

Map