F373128

General Info

Members Datasets Scaffolds Average Seq Length
265 193 530 154

Family's Representative Sequence

Representative Sequence 3300005434|Ga0070709_10021395|Ga0070709_100213952
Length 180
Sequence VGAAPAAQGRAAGAARPLAVRAPWHAFQVTSRPTAQERLRDLARLRRVRDRIDRDYTQPLDVEALARGEHMSAGHLSREFKAAYGESPYGYLMTRRIERAMALLRRGDLSVTDVCFAVGCSSLGTFSTRFTELVGVPPSTYRRLAASEAEDVETEGMPSCVAKQVTRPIRNQEARLTERH

Samples

Sample ID Description Type Environment
1 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
45 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
49 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
76 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
77 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
78 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
81 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
88 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
89 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
91 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
92 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
93 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
94 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
96 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
97 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
108 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
109 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
110 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
111 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
112 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
113 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
114 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
115 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
116 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
117 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
118 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
119 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
120 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
121 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
122 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
123 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
124 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
125 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
126 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
127 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
128 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
129 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
130 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
131 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
132 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
133 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
134 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
135 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
136 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
137 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
138 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
139 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
140 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
141 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
142 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
143 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
144 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
145 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
146 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
147 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
148 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
149 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
150 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
151 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
152 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
153 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
154 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
155 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
156 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
157 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
158 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
159 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
160 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
161 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
162 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
163 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
164 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
165 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
168 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
169 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
170 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
171 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
172 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
173 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
174 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
175 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
176 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
179 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
180 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
181 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
182 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
183 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
184 2501939600 Micromonospora sp. L5 Isolate Unclassified
185 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
186 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
187 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
188 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
189 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
190 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
191 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
192 649633069 Micromonospora sp. L5 Isolate Unclassified
193 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.47
Metatranscriptomes 0.75
Isolates 3.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.53
Nodule 0
Rhizoplane 4.91
Rhizosphere 86.42
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070709_10021395 3300005434 Bacteria 3766
2 JGI24739J22299_10022390 3300001989 Bacteria 2242
3 JGI24739J22299_10137942 3300001989 Bacteria 724
4 JGI24737J22298_10008513 3300001990 Bacteria 3430
5 JGI24738J21930_10116889 3300002075 Bacteria 577
6 Ga0070670_100568258 3300005331 Bacteria 1013
7 Ga0070667_101003564 3300005367 Bacteria 779
8 Ga0070709_10115792 3300005434 Bacteria 1808
9 Ga0070714_100074066 3300005435 Bacteria 2951
10 Ga0070713_100312896 3300005436 Bacteria 1448
11 Ga0070710_10054018 3300005437 Bacteria 2265
12 Ga0070710_10285395 3300005437 Bacteria 1072
13 Ga0070711_100075080 3300005439 Bacteria 2392
14 Ga0070700_100000072 3300005441 Bacteria 71205
15 Ga0070700_100003458 3300005441 Bacteria 8146
16 Ga0070663_100496679 3300005455 Bacteria 1012
17 Ga0070707_100132688 3300005468 Bacteria 2422
18 Ga0070684_100120742 3300005535 Bacteria 2358
19 Ga0070695_100516434 3300005545 Bacteria 926
20 Ga0070665_100346769 3300005548 Bacteria 1490
21 Ga0068855_100168815 3300005563 Bacteria 2478
22 Ga0068857_100385063 3300005577 Bacteria 1303
23 Ga0068856_100248386 3300005614 Bacteria 1794
24 Ga0068856_100464470 3300005614 Bacteria 1286
25 Ga0068856_101006129 3300005614 Bacteria 852
26 Ga0070702_100401610 3300005615 Bacteria 980
27 Ga0068863_100240686 3300005841 Bacteria 1746
28 Ga0068863_100755033 3300005841 Bacteria 969
29 Ga0068858_100104659 3300005842 Bacteria 2641
30 Ga0081455_10010319 3300005937 Bacteria 9495
31 Ga0070717_10279501 3300006028 Bacteria 1480
32 Ga0075365_10110886 3300006038 Bacteria 1885
33 Ga0075365_10713087 3300006038 Bacteria 708
34 Ga0075363_100052970 3300006048 Bacteria 2167
35 Ga0075364_10031008 3300006051 Bacteria 3434
36 Ga0075364_10199565 3300006051 Bacteria 1356
37 Ga0075364_10217506 3300006051 Bacteria 1296
38 Ga0075364_10360225 3300006051 Bacteria 992
39 Ga0070716_100156352 3300006173 Bacteria 1472
40 Ga0070712_100108552 3300006175 Bacteria 2066
41 Ga0070712_100272157 3300006175 Bacteria 1361
42 Ga0070712_100308804 3300006175 Bacteria 1282
43 Ga0075367_10021589 3300006178 Bacteria 3600
44 Ga0097621_100204251 3300006237 Bacteria 1717
45 Ga0075429_100784091 3300006880 Bacteria 835
46 Ga0105245_10037800 3300009098 Bacteria 4293
47 Ga0105245_10338351 3300009098 Bacteria 1487
48 Ga0105247_10238137 3300009101 Bacteria 1239
49 Ga0105248_12000812 3300009177 Bacteria 658
50 Ga0105237_10569980 3300009545 Bacteria 1139
51 Ga0105239_10432406 3300010375 Bacteria 1492
52 Ga0105239_12634360 3300010375 Bacteria 586
53 Ga0157371_10470419 3300013102 Bacteria 926
54 Ga0157371_10787073 3300013102 Bacteria 716
55 Ga0157370_10077896 3300013104 Bacteria 3122
56 Ga0157374_10003370 3300013296 Bacteria 13422
57 Ga0157372_10295565 3300013307 Bacteria 1884
58 Ga0157375_11022801 3300013308 Bacteria 965
59 Ga0157380_11129617 3300014326 Bacteria 824
60 Ga0157377_10085407 3300014745 Bacteria 1853
61 Ga0157379_10074485 3300014968 Bacteria 3039
62 Ga0157376_10043948 3300014969 Bacteria 3670
63 Ga0197907_11065123 3300020069 Bacteria 1729
64 Ga0213875_10577380 3300021388 Bacteria 542
65 Ga0224712_10035842 3300022467 Bacteria 1834
66 Ga0207710_10142990 3300025900 Bacteria 1156
67 Ga0207680_10181052 3300025903 Bacteria 1425
68 Ga0207699_10053651 3300025906 Bacteria 2391
69 Ga0207699_10797593 3300025906 Bacteria 694
70 Ga0207707_10615972 3300025912 Bacteria 918
71 Ga0207671_10454138 3300025914 Bacteria 1021
72 Ga0207693_10081258 3300025915 Bacteria 2537
73 Ga0207663_10196329 3300025916 Bacteria 1453
74 Ga0207646_10114909 3300025922 Bacteria 2417
75 Ga0207694_10191679 3300025924 Bacteria 1661
76 Ga0207650_10484859 3300025925 Bacteria 1032
77 Ga0207664_10106766 3300025929 Bacteria 2322
78 Ga0207664_10199561 3300025929 Bacteria 1726
79 Ga0207664_10242502 3300025929 Bacteria 1570
80 Ga0207664_10255021 3300025929 Bacteria 1532
81 Ga0207664_10494891 3300025929 Bacteria 1094
82 Ga0207665_10006723 3300025939 Bacteria 7625
83 Ga0207667_10143838 3300025949 Bacteria 2455
84 Ga0207639_10172507 3300026041 Bacteria 1833
85 Ga0207678_10167265 3300026067 Bacteria 1878
86 Ga0207708_10000023 3300026075 Bacteria 176615
87 Ga0207702_10273606 3300026078 Bacteria 1594
88 Ga0207702_11441481 3300026078 Bacteria 682
89 Ga0207641_10922635 3300026088 Bacteria 868
90 Ga0207641_11047729 3300026088 Bacteria 813
91 Ga0207641_11301991 3300026088 Bacteria 727
92 Ga0207648_10522777 3300026089 Bacteria 1087
93 Ga0207676_11199956 3300026095 Bacteria 752
94 Ga0207674_10071819 3300026116 Bacteria 3477
95 Ga0207674_10075751 3300026116 Bacteria 3374
96 Ga0268264_11010183 3300028381 Bacteria 838
97 Ga0307515_10454383 3300028794 Bacteria 896
98 Ga0265327_10018964 3300031251 Bacteria 4245
99 Ga0307513_10171565 3300031456 Bacteria 2046
100 Ga0307509_10820173 3300031507 Bacteria 595
101 Ga0307405_10020173 3300031731 Bacteria 3719
102 Ga0307413_10016868 3300031824 Bacteria 3789
103 Ga0307410_10002515 3300031852 Bacteria 8865
104 Ga0307406_10011723 3300031901 Bacteria 4976
105 Ga0307407_10014493 3300031903 Bacteria 3863
106 Ga0307412_10002669 3300031911 Bacteria 9900
107 Ga0307412_11001867 3300031911 Bacteria 738
108 Ga0307409_100042840 3300031995 Bacteria 3393
109 Ga0307416_100021261 3300032002 Bacteria 4653
110 Ga0307416_101768731 3300032002 Bacteria 722
111 Ga0307414_10006912 3300032004 Bacteria 6355
112 Ga0307411_10000125 3300032005 Bacteria 24093
113 Ga0307415_100039115 3300032126 Bacteria 3131
114 Ga0307415_100561564 3300032126 Bacteria 1009
115 Ga0373944_0081990 3300035089 Bacteria 1066
116 Ga0373952_0203878 3300035092 Bacteria 581
117 Ga0373923_0148152 3300035111 Bacteria 1064
118 Ga0373923_0218844 3300035111 Bacteria 884
119 Ga0373956_0007854 3300035119 Bacteria 4304
120 Ga0373956_0126365 3300035119 Bacteria 1196
121 Ga0373956_0330305 3300035119 Bacteria 727
122 Ga0373957_0075062 3300035120 Bacteria 1328
123 Ga0373960_0054283 3300035121 Bacteria 1198
124 Ga0373960_0225191 3300035121 Bacteria 672
125 Ga0373946_0013706 3300035171 Bacteria 3050
126 Ga0373924_0007786 3300035410 Bacteria 3873
127 Ga0373935_0103730 3300035692 Bacteria 1878
128 Ga0373935_0471987 3300035692 Bacteria 908
129 Ga0373927_0052447 3300035695 Bacteria 2638
130 Ga0373933_0102350 3300035724 Bacteria 1778
131 Ga0373933_0544484 3300035724 Bacteria 761
132 Ga0373947_0772990 3300035725 Bacteria 655
133 Ga0373937_0057747 3300036401 Bacteria 3565
134 Ga0373937_0306167 3300036401 Bacteria 1502
135 Ga0373925_0276607 3300037068 Bacteria 1351
136 Ga0373925_0338323 3300037068 Bacteria 1220
137 Ga0373925_0351211 3300037068 Bacteria 1197
138 Ga0395899_0002643 3300037312 Bacteria 14449
139 Ga0395899_0005613 3300037312 Bacteria 9736
140 Ga0395899_0126505 3300037312 Bacteria 1827
141 Ga0395900_0003935 3300037418 Bacteria 15859
142 Ga0395900_0009367 3300037418 Bacteria 10040
143 Ga0395900_0181826 3300037418 Bacteria 2136
144 Ga0395898_0023526 3300037466 Bacteria 6224
145 Ga0395898_0028444 3300037466 Bacteria 5601
146 Ga0395898_0087955 3300037466 Bacteria 2992
147 Ga0395898_0809752 3300037466 Bacteria 877
148 Ga0395905_0007975 3300037471 Bacteria 10468
149 Ga0395905_0150287 3300037471 Bacteria 2191
150 Ga0395901_0012991 3300038443 Bacteria 8449
151 Ga0395901_0029688 3300038443 Bacteria 5630
152 Ga0395901_0115565 3300038443 Bacteria 2818
153 Ga0436365_1703830 3300039437 Bacteria 953
154 Ga0436363_0977940 3300039450 Bacteria 678
155 Ga0451795_1357464 3300041456 Bacteria 559
156 Ga0451798_0465273 3300041458 Bacteria 904
157 Ga0451800_1211148 3300041459 Bacteria 1542
158 Ga0451802_1027710 3300041460 Bacteria 1415
159 Ga0451845_0406977 3300041501 Bacteria 673
160 Ga0451853_0692132 3300041512 Bacteria 3216
161 Ga0466969_0030807 3300044656 Bacteria 2732
162 Ga0466972_0179934 3300044658 Bacteria 992
163 Ga0466966_0011675 3300044684 Bacteria 5822
164 Ga0466966_0292124 3300044684 Bacteria 980
165 Ga0466961_0007438 3300044693 Bacteria 6971
166 Ga0466961_0022696 3300044693 Bacteria 4036
167 Ga0466961_0450949 3300044693 Bacteria 778
168 Ga0466963_0002274 3300044694 Bacteria 10670
169 Ga0466963_0188749 3300044694 Bacteria 1440
170 Ga0466971_0175915 3300044719 Bacteria 1005
171 Ga0466970_0248555 3300044765 Bacteria 996
172 Ga0466970_0572247 3300044765 Bacteria 654
173 Ga0466960_0085569 3300044901 Bacteria 1597
174 Ga0466960_0189772 3300044901 Bacteria 1118
175 Ga0466959_0159917 3300045049 Bacteria 1584
176 Ga0466959_0765673 3300045049 Bacteria 646
177 Ga0466958_0304818 3300045836 Bacteria 1023
178 Ga0466967_0205870 3300045976 Bacteria 1865
179 Ga0495592_0228119 3300046454 Bacteria 1241
180 Ga0495629_0113761 3300046459 Bacteria 1886
181 Ga0495638_0225632 3300046460 Bacteria 1045
182 Ga0495651_0033101 3300046462 Bacteria 4031
183 Ga0495651_0087763 3300046462 Bacteria 2338
184 Ga0495653_0032640 3300046463 Bacteria 4132
185 Ga0495653_0089593 3300046463 Bacteria 2253
186 Ga0495639_0068506 3300046475 Bacteria 1636
187 Ga0495662_0100507 3300046476 Bacteria 1415
188 Ga0495664_0076326 3300046477 Bacteria 2005
189 Ga0495594_0308831 3300046499 Bacteria 901
190 Ga0495608_0045552 3300046511 Bacteria 2922
191 Ga0495608_0068262 3300046511 Bacteria 2324
192 Ga0495608_0244753 3300046511 Bacteria 1119
193 Ga0495618_0067426 3300046514 Bacteria 2275
194 Ga0495618_0268619 3300046514 Bacteria 1066
195 Ga0495628_0175249 3300046516 Bacteria 1624
196 Ga0495630_0126164 3300046517 Bacteria 1942
197 Ga0495666_0034742 3300046526 Bacteria 2459
198 Ga0495652_0039999 3300046529 Bacteria 4053
199 Ga0495665_0070563 3300046531 Bacteria 1841
200 Ga0495640_0008936 3300046533 Bacteria 7823
201 Ga0495645_0055762 3300046543 Bacteria 2869
202 Ga0495667_0014511 3300046559 Bacteria 5321
203 Ga0495656_0146891 3300046615 Bacteria 1136
204 Ga0495634_0089018 3300046642 Bacteria 2007
205 Ga0495635_0025199 3300046663 Bacteria 4142
206 Ga0495657_0007597 3300046675 Bacteria 8358
207 Ga0495657_0054887 3300046675 Bacteria 2659
208 Ga0495599_0047324 3300046678 Bacteria 2695
209 Ga0495623_0042340 3300046679 Bacteria 2901
210 Ga0495646_0205380 3300046680 Bacteria 1071
211 Ga0495613_0071979 3300046689 Bacteria 2520
212 Ga0495624_0021353 3300046690 Bacteria 4294
213 Ga0495624_0138225 3300046690 Bacteria 1493
214 Ga0495600_0011551 3300046809 Bacteria 5507
215 Ga0495600_0097433 3300046809 Bacteria 1917
216 Ga0495674_0246720 3300047319 Bacteria 1470
217 Ga0495674_0558415 3300047319 Bacteria 910
218 Ga0495672_0070395 3300047320 Bacteria 1982
219 Ga0495676_0595016 3300047321 Bacteria 720
220 Ga0495680_0017500 3300047322 Bacteria 6117
221 Ga0495680_0038482 3300047322 Bacteria 3821
222 Ga0495680_0163587 3300047322 Bacteria 1614
223 Ga0495675_0072771 3300047444 Bacteria 2168
224 Ga0495679_154245 3300047446 Bacteria 616
225 Ga0495684_0016062 3300047471 Bacteria 5762
226 Ga0495684_0049469 3300047471 Bacteria 3211
227 Ga0495686_0000011 3300047472 Bacteria 514750
228 Ga0495593_0439274 3300047673 Bacteria 653
229 Ga0495602_0059094 3300048088 Bacteria 3350
230 Ga0496103_0131763 3300048906 Bacteria 1597
231 Ga0496104_0040532 3300048907 Bacteria 4365
232 Ga0496104_1126666 3300048907 Bacteria 688
233 Ga0496108_0117393 3300048911 Bacteria 2280
234 Ga0496110_0117269 3300048913 Bacteria 2397
235 Ga0496111_0144358 3300048914 Bacteria 1764
236 Ga0496111_0871081 3300048914 Bacteria 649
237 Ga0496112_0207424 3300048915 Bacteria 1917
238 Ga0496113_0283721 3300048916 Bacteria 1324
239 Ga0495682_0192114 3300049460 Bacteria 725
240 Ga0501069_0165879 3300049585 Bacteria 1273
241 Ga0501074_0207313 3300049590 Bacteria 1397
242 nmdc:mga00v17_426281_c1 3300050491 Bacteria 862
243 nmdc:mga0yw44_27208_c1 3300050492 Bacteria 3274
244 nmdc:mga0yw44_469754_c1 3300050492 Bacteria 853
245 nmdc:mga06z11_7947_c1 3300050494 Bacteria 4393
246 nmdc:mga09592_340756_c1 3300050508 Bacteria 1298
247 nmdc:mga0n895_274305_c1 3300050512 Bacteria 1710
248 nmdc:mga0rr50_461032_c1 3300050513 Bacteria 1078
249 Ga0495601_0107554 3300053077 Bacteria 1804
250 Ga0495595_0020518 3300053084 Bacteria 2877
251 Ga0495595_0204904 3300053084 Bacteria 982
252 Ga0495619_0026754 3300053085 Bacteria 3713
253 Ga0495619_0637526 3300053085 Bacteria 727
254 Ga0466962_0001081 3300061719 Bacteria 12519
255 Ga0466962_0264010 3300061719 Bacteria 848
256 2501942029 2501939600 Bacteria 6907073
257 2515851821 2515154155 Bacteria 7985436
258 2525557499 2524614729 Bacteria 3091755
259 2616905100 2616644941 Bacteria 8510691
260 2630649090 2627854209 Bacteria 3093011
261 2837272869 2837268691 Bacteria 7850704
262 2856862889 2856858025 Bacteria 7255264
263 2919054886 2919051321 Bacteria 4210889
264 649815335 649633069 Bacteria 6962533
265 8003832001 8003830390 Bacteria 6541657
266 Ga0070709_10021395
267 JGI24739J22299_10022390
268 JGI24739J22299_10137942
269 JGI24737J22298_10008513
270 JGI24738J21930_10116889
271 Ga0070670_100568258
272 Ga0070667_101003564
273 Ga0070709_10115792
274 Ga0070714_100074066
275 Ga0070713_100312896
276 Ga0070710_10054018
277 Ga0070710_10285395
278 Ga0070711_100075080
279 Ga0070700_100000072
280 Ga0070700_100003458
281 Ga0070663_100496679
282 Ga0070707_100132688
283 Ga0070684_100120742
284 Ga0070695_100516434
285 Ga0070665_100346769
286 Ga0068855_100168815
287 Ga0068857_100385063
288 Ga0068856_100248386
289 Ga0068856_100464470
290 Ga0068856_101006129
291 Ga0070702_100401610
292 Ga0068863_100240686
293 Ga0068863_100755033
294 Ga0068858_100104659
295 Ga0081455_10010319
296 Ga0070717_10279501
297 Ga0075365_10110886
298 Ga0075365_10713087
299 Ga0075363_100052970
300 Ga0075364_10031008
301 Ga0075364_10199565
302 Ga0075364_10217506
303 Ga0075364_10360225
304 Ga0070716_100156352
305 Ga0070712_100108552
306 Ga0070712_100272157
307 Ga0070712_100308804
308 Ga0075367_10021589
309 Ga0097621_100204251
310 Ga0075429_100784091
311 Ga0105245_10037800
312 Ga0105245_10338351
313 Ga0105247_10238137
314 Ga0105248_12000812
315 Ga0105237_10569980
316 Ga0105239_10432406
317 Ga0105239_12634360
318 Ga0157371_10470419
319 Ga0157371_10787073
320 Ga0157370_10077896
321 Ga0157374_10003370
322 Ga0157372_10295565
323 Ga0157375_11022801
324 Ga0157380_11129617
325 Ga0157377_10085407
326 Ga0157379_10074485
327 Ga0157376_10043948
328 Ga0197907_11065123
329 Ga0213875_10577380
330 Ga0224712_10035842
331 Ga0207710_10142990
332 Ga0207680_10181052
333 Ga0207699_10053651
334 Ga0207699_10797593
335 Ga0207707_10615972
336 Ga0207671_10454138
337 Ga0207693_10081258
338 Ga0207663_10196329
339 Ga0207646_10114909
340 Ga0207694_10191679
341 Ga0207650_10484859
342 Ga0207664_10106766
343 Ga0207664_10199561
344 Ga0207664_10242502
345 Ga0207664_10255021
346 Ga0207664_10494891
347 Ga0207665_10006723
348 Ga0207667_10143838
349 Ga0207639_10172507
350 Ga0207678_10167265
351 Ga0207708_10000023
352 Ga0207702_10273606
353 Ga0207702_11441481
354 Ga0207641_10922635
355 Ga0207641_11047729
356 Ga0207641_11301991
357 Ga0207648_10522777
358 Ga0207676_11199956
359 Ga0207674_10071819
360 Ga0207674_10075751
361 Ga0268264_11010183
362 Ga0307515_10454383
363 Ga0265327_10018964
364 Ga0307513_10171565
365 Ga0307509_10820173
366 Ga0307405_10020173
367 Ga0307413_10016868
368 Ga0307410_10002515
369 Ga0307406_10011723
370 Ga0307407_10014493
371 Ga0307412_10002669
372 Ga0307412_11001867
373 Ga0307409_100042840
374 Ga0307416_100021261
375 Ga0307416_101768731
376 Ga0307414_10006912
377 Ga0307411_10000125
378 Ga0307415_100039115
379 Ga0307415_100561564
380 Ga0373944_0081990
381 Ga0373952_0203878
382 Ga0373923_0148152
383 Ga0373923_0218844
384 Ga0373956_0007854
385 Ga0373956_0126365
386 Ga0373956_0330305
387 Ga0373957_0075062
388 Ga0373960_0054283
389 Ga0373960_0225191
390 Ga0373946_0013706
391 Ga0373924_0007786
392 Ga0373935_0103730
393 Ga0373935_0471987
394 Ga0373927_0052447
395 Ga0373933_0102350
396 Ga0373933_0544484
397 Ga0373947_0772990
398 Ga0373937_0057747
399 Ga0373937_0306167
400 Ga0373925_0276607
401 Ga0373925_0338323
402 Ga0373925_0351211
403 Ga0395899_0002643
404 Ga0395899_0005613
405 Ga0395899_0126505
406 Ga0395900_0003935
407 Ga0395900_0009367
408 Ga0395900_0181826
409 Ga0395898_0023526
410 Ga0395898_0028444
411 Ga0395898_0087955
412 Ga0395898_0809752
413 Ga0395905_0007975
414 Ga0395905_0150287
415 Ga0395901_0012991
416 Ga0395901_0029688
417 Ga0395901_0115565
418 Ga0436365_1703830
419 Ga0436363_0977940
420 Ga0451795_1357464
421 Ga0451798_0465273
422 Ga0451800_1211148
423 Ga0451802_1027710
424 Ga0451845_0406977
425 Ga0451853_0692132
426 Ga0466969_0030807
427 Ga0466972_0179934
428 Ga0466966_0011675
429 Ga0466966_0292124
430 Ga0466961_0007438
431 Ga0466961_0022696
432 Ga0466961_0450949
433 Ga0466963_0002274
434 Ga0466963_0188749
435 Ga0466971_0175915
436 Ga0466970_0248555
437 Ga0466970_0572247
438 Ga0466960_0085569
439 Ga0466960_0189772
440 Ga0466959_0159917
441 Ga0466959_0765673
442 Ga0466958_0304818
443 Ga0466967_0205870
444 Ga0495592_0228119
445 Ga0495629_0113761
446 Ga0495638_0225632
447 Ga0495651_0033101
448 Ga0495651_0087763
449 Ga0495653_0032640
450 Ga0495653_0089593
451 Ga0495639_0068506
452 Ga0495662_0100507
453 Ga0495664_0076326
454 Ga0495594_0308831
455 Ga0495608_0045552
456 Ga0495608_0068262
457 Ga0495608_0244753
458 Ga0495618_0067426
459 Ga0495618_0268619
460 Ga0495628_0175249
461 Ga0495630_0126164
462 Ga0495666_0034742
463 Ga0495652_0039999
464 Ga0495665_0070563
465 Ga0495640_0008936
466 Ga0495645_0055762
467 Ga0495667_0014511
468 Ga0495656_0146891
469 Ga0495634_0089018
470 Ga0495635_0025199
471 Ga0495657_0007597
472 Ga0495657_0054887
473 Ga0495599_0047324
474 Ga0495623_0042340
475 Ga0495646_0205380
476 Ga0495613_0071979
477 Ga0495624_0021353
478 Ga0495624_0138225
479 Ga0495600_0011551
480 Ga0495600_0097433
481 Ga0495674_0246720
482 Ga0495674_0558415
483 Ga0495672_0070395
484 Ga0495676_0595016
485 Ga0495680_0017500
486 Ga0495680_0038482
487 Ga0495680_0163587
488 Ga0495675_0072771
489 Ga0495679_154245
490 Ga0495684_0016062
491 Ga0495684_0049469
492 Ga0495686_0000011
493 Ga0495593_0439274
494 Ga0495602_0059094
495 Ga0496103_0131763
496 Ga0496104_0040532
497 Ga0496104_1126666
498 Ga0496108_0117393
499 Ga0496110_0117269
500 Ga0496111_0144358
501 Ga0496111_0871081
502 Ga0496112_0207424
503 Ga0496113_0283721
504 Ga0495682_0192114
505 Ga0501069_0165879
506 Ga0501074_0207313
507 nmdc:mga00v17_426281_c1
508 nmdc:mga0yw44_27208_c1
509 nmdc:mga0yw44_469754_c1
510 nmdc:mga06z11_7947_c1
511 nmdc:mga09592_340756_c1
512 nmdc:mga0n895_274305_c1
513 nmdc:mga0rr50_461032_c1
514 Ga0495601_0107554
515 Ga0495595_0020518
516 Ga0495595_0204904
517 Ga0495619_0026754
518 Ga0495619_0637526
519 Ga0466962_0001081
520 Ga0466962_0264010
521 2501942029
522 2515851821
523 2525557499
524 2616905100
525 2630649090
526 2837272869
527 2856862889
528 2919054886
529 649815335
530 8003832001

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

65

144

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mn2-assembly2.cif.gz_B the crystal structure of a probable arac family transcriptional regulator from rhodopseudomonas palustris cga009 0.9334 15 117
3oou-assembly1.cif.gz_A the structure of a protein with unkown function from listeria innocua 0.9243 17 116
1u8b-assembly1.cif.gz_A crystal structure of the methylated n-ada/dna complex 0.917 10 68
6swi-assembly1.cif.gz_A the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus 0.9126 16 116
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.908 17 124
ID Description Score Start End Superfamily
5suwA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9695 65 117 1.10.10.60
af_P0A9E0_176_235_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9541 15 71 1.10.10.60
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9531 68 120 1.10.10.60
af_P09377_170_274_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9481 15 116 1.10.10.60
af_P06134_78_136_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9435 10 67 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A5J6FYF9-F1-model_v4 deleted 0.9925 9 117
AF-A0A560W460-F1-model_v4 AraC-like DNA-binding protein 0.9829 10 127 GO:0003700
GO:0043565
AF-A0A7X8QLK6-F1-model_v4 Stage 0 sporulation protein A homolog 0.9743 8 117 GO:0000160
GO:0003700
GO:0043565
AF-A0A416ZK31-F1-model_v4 AraC family transcriptional regulator 0.9742 15 117 GO:0003700
GO:0043565
AF-A0A2N1SE66-F1-model_v4 DNA-binding response regulator 0.973 13 121 GO:0000160
GO:0003700
GO:0043565

Map