F373039

General Info

Members Datasets Scaffolds Average Seq Length
265 164 262 516

Family's Representative Sequence

Representative Sequence 3300003322|rootL2_10021850|rootL2_1002185038
Length 554
Sequence MTPKEIAELLPYMTEEERKEFDALIARDITDVPWRALPGPQLMAYESEADIVGYGGAAGGGKTDLIAGLCLTKHERALVVRREKAQTEGVIQRLGEILGDTDGFNSQKSIWRIPGGALTEFAGLDNPGDERRWQGRPHDLKAFDEVTEQREHQVRFVMGWNRSNKAHLKGKVLMTFNPPTTSEGRWVIDFFGPWIDKKHALYPTPPGTLRWCAMLPTENGTSRDVWVEDGRKFVLKDGKPCYEFDPADYGDEDIIQPKSRTFIPARLTDNPYYMASGYMSTLQALPEPLRSQMLYGDFQAGIGDDPWQVIPTAWVEAAQARWKPRSPRGEMLAMGCDVARGGKDNTTIATRHKTETTDKWFDKLEAGKTFLQGTETPDGPKVAGYIVAARRDDAPVLIDVIGVGASPYDVLNGLGVQVLGINVAEKAQGLDKSGRLHFFNLRSELWWRMRETLDPANDTGVALPPDPELTKELCMPKWELSGMTVKVESREDIVKRLGRSPDRATAYVLANISVPKLKALQAAHSRMEVVNYDPMAHARQDYGSSLDYDPMGRL

Samples

Sample ID Description Type Environment
1 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
6 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
12 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
13 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
14 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
34 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
43 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
44 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
46 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
47 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
49 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
50 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
65 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
67 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
68 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
69 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
70 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
75 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
84 3300042119 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218L_E14_082316_1902 Metagenome Rhizosphere
85 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
86 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
87 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
97 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
98 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
99 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
100 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
101 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
102 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
103 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
104 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
105 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
106 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
107 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
108 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
109 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
110 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
111 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
112 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
113 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
114 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
115 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
116 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
117 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
118 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
119 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
122 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
123 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
126 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
127 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
130 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
133 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
134 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
135 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
136 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
137 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
141 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
142 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
160 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
161 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
162 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
163 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
164 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.87
Metatranscriptomes 0.75
Isolates 0.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.06
Nodule 0.75
Rhizoplane 1.51
Rhizosphere 83.77
Stem 0
Stem Tuber 0
Unclassified 4.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1006395 3300002705 Unclassified 3225
2 JGI25162J39368_1000066 3300002737 Bacteria 130612
3 JGI25157J39369_1000283 3300002741 Bacteria 36962
4 JGI25163J39215_1000554 3300002771 Bacteria 10712
5 JGI25164J39214_1000387 3300002772 Bacteria 25936
6 JGI25165J46597_1000009 3300003214 Bacteria 467965
7 rootH1_10012058 3300003316 Viruses 7465
8 rootL2_10002149 3300003322 Bacteria 43160
9 rootL2_10021850 3300003322 Bacteria 47247
10 rootL2_10065005 3300003322 Bacteria 43830
11 rootH1_10150848 3300003323 Bacteria 8300
12 Ga0055535_1000045 3300003761 Bacteria 140688
13 Ga0055535_1000622 3300003761 Bacteria 28713
14 Ga0055542_1000079 3300003762 Bacteria 130623
15 Ga0055529_1000188 3300003763 Bacteria 85016
16 Ga0055524_1000272 3300003775 Bacteria 51811
17 Ga0055528_1000300 3300003790 Bacteria 42081
18 Ga0065704_10085698 3300005289 Bacteria 3195
19 Ga0070669_100001276 3300005353 Bacteria 18260
20 Ga0070711_100029813 3300005439 Bacteria 3605
21 Ga0070686_100004639 3300005544 Bacteria 7578
22 Ga0068855_100028969 3300005563 Bacteria 6624
23 Ga0068855_100127958 3300005563 Unclassified 2903
24 Ga0068857_100011568 3300005577 Bacteria 7676
25 Ga0068856_100042691 3300005614 Viruses 4461
26 Ga0068852_100006124 3300005616 Bacteria 8677
27 Ga0068859_100015030 3300005617 Bacteria 7771
28 Ga0068858_100003326 3300005842 Bacteria 16005
29 Ga0068862_100078457 3300005844 Archaea 2861
30 Ga0070717_10000124 3300006028 Bacteria 58419
31 Ga0075428_100019817 3300006844 Bacteria 7443
32 Ga0075430_100004086 3300006846 Bacteria 12316
33 Ga0075430_100043821 3300006846 Bacteria 3784
34 Ga0075431_100007847 3300006847 Bacteria 10638
35 Ga0075431_100013075 3300006847 Bacteria 8383
36 Ga0075429_100011954 3300006880 Bacteria 7526
37 Ga0097620_100015031 3300006931 Bacteria 7771
38 Ga0079104_1000011 3300006946 Bacteria 359962
39 Ga0105250_10010161 3300009092 Bacteria 3929
40 Ga0105240_10025091 3300009093 Bacteria 7844
41 Ga0114129_10014828 3300009147 Bacteria 11106
42 Ga0114129_10247237 3300009147 Bacteria 2396
43 Ga0105242_10005436 3300009176 Bacteria 9855
44 Ga0105248_10004192 3300009177 Bacteria 15936
45 Ga0105248_10005841 3300009177 Bacteria 13528
46 Ga0157372_10074654 3300013307 Bacteria 3824
47 Ga0206354_10634436 3300020081 Viruses 8536
48 Ga0206353_10072693 3300020082 Viruses 9700
49 Ga0213872_10027828 3300021361 Bacteria 2594
50 Ga0209760_100460 3300025207 Bacteria 9113
51 Ga0209784_100013 3300025224 Bacteria 518664
52 Ga0207427_100030 3300025231 Bacteria 358045
53 Ga0209437_100012 3300025233 Bacteria 792625
54 Ga0209258_100019 3300025242 Bacteria 566728
55 Ga0209646_1000349 3300025246 Bacteria 33708
56 Ga0209026_1000015 3300025250 Bacteria 395555
57 Ga0209148_1000001 3300025254 Bacteria 2545271
58 Ga0209759_1000367 3300025256 Bacteria 56530
59 Ga0209233_1000002 3300025261 Bacteria 2501366
60 Ga0209565_1000775 3300025263 Bacteria 18547
61 Ga0209455_1000027 3300025272 Bacteria 566710
62 Ga0209673_1000510 3300025273 Bacteria 64007
63 Ga0209256_1000077 3300025299 Bacteria 230410
64 Ga0207695_10130406 3300025913 Viruses 2472
65 Ga0207681_10000314 3300025923 Bacteria 35265
66 Ga0207686_10039252 3300025934 Bacteria 2872
67 Ga0207711_10002398 3300025941 Bacteria 16747
68 Ga0207703_10009401 3300026035 Bacteria 7680
69 Ga0207674_10017962 3300026116 Bacteria 7707
70 Ga0207698_10025803 3300026142 Viruses 4147
71 Ga0209281_1000005 3300027111 Bacteria 1242284
72 Ga0268265_10030180 3300028380 Bacteria 3901
73 Ga0265337_1024366 3300028556 Bacteria 1852
74 Ga0265326_10000966 3300028558 Viruses 10394
75 Ga0265326_10001132 3300028558 Bacteria 9499
76 Ga0265334_10000109 3300028573 Bacteria 54744
77 Ga0265322_10009829 3300028654 Viruses 2775
78 Ga0265336_10005960 3300028666 Viruses 4444
79 Ga0265338_10052647 3300028800 Viruses 3650
80 Ga0265324_10006534 3300029957 Viruses 4842
81 Ga0307412_10059302 3300031911 Bacteria 2564
82 Ga0307414_10012364 3300032004 Bacteria 5044
83 Ga0373960_0000008 3300035121 Bacteria 26468
84 Ga0373937_0103911 3300036401 Viruses 2639
85 Ga0395899_0000482 3300037312 Bacteria 44646
86 Ga0395899_0000489 3300037312 Unclassified 44287
87 Ga0395899_0001162 3300037312 Viruses 23280
88 Ga0395899_0002033 3300037312 Bacteria 16653
89 Ga0395899_0003019 3300037312 Bacteria 13438
90 Ga0395899_0004900 3300037312 Bacteria 10408
91 Ga0395899_0009647 3300037312 Bacteria 7409
92 Ga0395900_0000745 3300037418 Viruses 43317
93 Ga0395900_0000768 3300037418 Bacteria 42674
94 Ga0395900_0001155 3300037418 Bacteria 33115
95 Ga0395900_0001315 3300037418 Viruses 30162
96 Ga0395900_0002892 3300037418 Bacteria 18699
97 Ga0395900_0009269 3300037418 Bacteria 10091
98 Ga0395900_0009978 3300037418 Bacteria 9721
99 Ga0395900_0039787 3300037418 Bacteria 4844
100 Ga0395900_0077846 3300037418 Bacteria 3407
101 Ga0395900_0100204 3300037418 Bacteria 2975
102 Ga0395898_0001031 3300037466 Viruses 43443
103 Ga0395898_0001037 3300037466 Bacteria 43317
104 Ga0395898_0001047 3300037466 Bacteria 43111
105 Ga0395898_0001066 3300037466 Bacteria 42674
106 Ga0395898_0002114 3300037466 Bacteria 24535
107 Ga0395898_0005562 3300037466 Bacteria 13591
108 Ga0395898_0007419 3300037466 Bacteria 11642
109 Ga0395898_0010749 3300037466 Bacteria 9561
110 Ga0395898_0011871 3300037466 Bacteria 9022
111 Ga0395898_0025001 3300037466 Bacteria 6021
112 Ga0395898_0065567 3300037466 Viruses 3520
113 Ga0395905_0000753 3300037471 Bacteria 42690
114 Ga0395905_0045109 3300037471 Viruses 4135
115 Ga0436364_1089403 3300037853 Bacteria 5964
116 Ga0395901_0000543 3300038443 Viruses 43440
117 Ga0395901_0000549 3300038443 Viruses 43317
118 Ga0395901_0005259 3300038443 Bacteria 13072
119 Ga0395901_0019769 3300038443 Bacteria 6886
120 Ga0395901_0057341 3300038443 Viruses 4051
121 Ga0436361_1122316 3300039447 Bacteria 25408
122 Ga0450915_000003 3300042119 Viruses 4604
123 Ga0450922_000796 3300042124 Bacteria 3232
124 Ga0450888_000170 3300042126 Viruses 5626
125 Ga0450888_000819 3300042126 Viruses 2970
126 Ga0450889_000031 3300042144 Bacteria 11981
127 Ga0451577_0001103 3300042876 Bacteria 38397
128 Ga0451577_0001156 3300042876 Bacteria 37277
129 Ga0451577_0059693 3300042876 Bacteria 3401
130 Ga0451577_0136548 3300042876 Unclassified 2202
131 Ga0466969_0000249 3300044656 Bacteria 29643
132 Ga0453683_0000380 3300044673 Bacteria 53114
133 Ga0453683_0005046 3300044673 Bacteria 9272
134 Ga0453683_0030228 3300044673 Bacteria 3425
135 Ga0453683_0099481 3300044673 Bacteria 1826
136 Ga0466966_0001618 3300044684 Bacteria 14500
137 Ga0466961_0000525 3300044693 Viruses 24283
138 Ga0453684_0003232 3300044712 Bacteria 37277
139 Ga0453684_0023017 3300044712 Bacteria 9208
140 Ga0453684_0024425 3300044712 Bacteria 8835
141 Ga0453684_0042810 3300044712 Bacteria 6097
142 Ga0453684_0049541 3300044712 Bacteria 5537
143 Ga0453684_0056875 3300044712 Bacteria 5070
144 Ga0466971_0002538 3300044719 Viruses 7721
145 Ga0466971_0041362 3300044719 Unclassified 2070
146 Ga0466957_0000077 3300044842 Bacteria 38850
147 Ga0466957_0000221 3300044842 Bacteria 26860
148 Ga0466959_0000249 3300045049 Bacteria 33375
149 Ga0451576_0003231 3300045051 Bacteria 22677
150 Ga0451576_0012476 3300045051 Bacteria 9542
151 Ga0451576_0020046 3300045051 Bacteria 7290
152 Ga0451576_0184672 3300045051 Bacteria 2177
153 Ga0451576_0312730 3300045051 Unclassified 1643
154 Ga0495592_0000270 3300046454 Bacteria 44270
155 Ga0495590_0000128 3300046457 Bacteria 44799
156 Ga0495629_0031562 3300046459 Bacteria 3750
157 Ga0495638_0000149 3300046460 Bacteria 110150
158 Ga0495651_0000553 3300046462 Bacteria 28832
159 Ga0495651_0020566 3300046462 Bacteria 5125
160 Ga0495653_0000238 3300046463 Bacteria 44270
161 Ga0495653_0000515 3300046463 Bacteria 29710
162 Ga0495653_0033648 3300046463 Bacteria 4059
163 Ga0495580_0049538 3300046472 Viruses 2972
164 Ga0495639_0000204 3300046475 Bacteria 30911
165 Ga0495662_0000146 3300046476 Bacteria 27621
166 Ga0495662_0049952 3300046476 Bacteria 2018
167 Ga0495664_0000091 3300046477 Bacteria 44270
168 Ga0495664_0000159 3300046477 Bacteria 33197
169 Ga0495606_0000887 3300046507 Bacteria 44730
170 Ga0495608_0001799 3300046511 Viruses 15300
171 Ga0495618_0000187 3300046514 Bacteria 44270
172 Ga0495628_0000415 3300046516 Bacteria 39140
173 Ga0495628_0000985 3300046516 Bacteria 26041
174 Ga0495628_0092798 3300046516 Bacteria 2335
175 Ga0495630_0000232 3300046517 Bacteria 44270
176 Ga0495643_0011957 3300046522 Bacteria 5256
177 Ga0495666_0000049 3300046526 Bacteria 44310
178 Ga0495652_0000519 3300046529 Bacteria 45015
179 Ga0495652_0000538 3300046529 Bacteria 44270
180 Ga0495652_0076514 3300046529 Bacteria 2776
181 Ga0495665_0000116 3300046531 Bacteria 37950
182 Ga0495665_0075264 3300046531 Bacteria 1777
183 Ga0495640_0000148 3300046533 Bacteria 44337
184 Ga0495586_0000155 3300046535 Bacteria 44074
185 Ga0495586_0003245 3300046535 Viruses 8739
186 Ga0495586_0004444 3300046535 Bacteria 7488
187 Ga0495586_0006953 3300046535 Bacteria 6027
188 Ga0495587_0000198 3300046536 Bacteria 44359
189 Ga0495645_0000532 3300046543 Bacteria 26165
190 Ga0495645_0014247 3300046543 Bacteria 5638
191 Ga0495645_0027036 3300046543 Bacteria 4167
192 Ga0495645_0076799 3300046543 Bacteria 2402
193 Ga0495667_0000169 3300046559 Bacteria 44166
194 Ga0495667_0016627 3300046559 Bacteria 4968
195 Ga0495656_0000074 3300046615 Bacteria 44629
196 Ga0495634_0000358 3300046642 Bacteria 44270
197 Ga0495634_0010821 3300046642 Bacteria 6672
198 Ga0495634_0032151 3300046642 Bacteria 3609
199 Ga0495634_0057150 3300046642 Bacteria 2605
200 Ga0495625_0000083 3300046660 Bacteria 152144
201 Ga0495625_0000750 3300046660 Bacteria 45305
202 Ga0495635_0002683 3300046663 Bacteria 12161
203 Ga0495588_0007701 3300046674 Bacteria 4918
204 Ga0495657_0002386 3300046675 Viruses 15806
205 Ga0495599_0000159 3300046678 Bacteria 44270
206 Ga0495623_0000130 3300046679 Bacteria 45695
207 Ga0495623_0020747 3300046679 Viruses 4246
208 Ga0495623_0034528 3300046679 Viruses 3243
209 Ga0495646_0000090 3300046680 Bacteria 44270
210 Ga0495646_0003720 3300046680 Viruses 9528
211 Ga0495613_0000304 3300046689 Bacteria 44368
212 Ga0495613_0004738 3300046689 Bacteria 10201
213 Ga0495624_0000208 3300046690 Bacteria 45267
214 Ga0495649_0019425 3300046694 Viruses 3818
215 Ga0495589_0001499 3300046794 Bacteria 13431
216 Ga0495600_0000117 3300046809 Bacteria 44432
217 Ga0495581_0000003 3300047315 Bacteria 88388
218 Ga0495581_0037008 3300047315 Bacteria 2823
219 Ga0495604_0000301 3300047317 Bacteria 44265
220 Ga0495604_0000918 3300047317 Bacteria 24517
221 Ga0495674_0000269 3300047319 Bacteria 44270
222 Ga0495674_0009385 3300047319 Bacteria 9301
223 Ga0495674_0013910 3300047319 Viruses 7549
224 Ga0495674_0026002 3300047319 Unclassified 5357
225 Ga0495674_0038757 3300047319 Viruses 4276
226 Ga0495674_0103302 3300047319 Unclassified 2423
227 Ga0495680_0002418 3300047322 Bacteria 19099
228 Ga0495675_0000128 3300047444 Bacteria 53661
229 Ga0495675_0013611 3300047444 Bacteria 5140
230 Ga0495681_0000248 3300047470 Bacteria 44188
231 Ga0495684_0000220 3300047471 Bacteria 44270
232 Ga0495686_0000742 3300047472 Bacteria 43521
233 Ga0495686_0039580 3300047472 Bacteria 3010
234 Ga0495593_0019279 3300047673 Bacteria 3824
235 Ga0495593_0035769 3300047673 Viruses 2695
236 Ga0495602_0000322 3300048088 Bacteria 44270
237 Ga0495614_0012805 3300048089 Bacteria 3681
238 Ga0495614_0029306 3300048089 Viruses 2369
239 Ga0496104_0000310 3300048907 Bacteria 43391
240 Ga0496105_0000163 3300048908 Viruses 44326
241 Ga0496112_0000900 3300048915 Viruses 21419
242 Ga0496115_0003892 3300048918 Bacteria 10758
243 Ga0496117_0007247 3300048920 Bacteria 10905
244 Ga0496125_0006756 3300048928 Bacteria 12324
245 Ga0501033_0003971 3300049570 Bacteria 11988
246 Ga0501033_0022893 3300049570 Viruses 4710
247 Ga0501038_0119347 3300049574 Viruses 2177
248 Ga0501047_0006270 3300049581 Bacteria 11178
249 Ga0501035_0000468 3300049822 Bacteria 45254
250 Ga0501035_0000603 3300049822 Bacteria 39629
251 Ga0501044_0002063 3300049823 Bacteria 23159
252 nmdc:mga05p37_89202_c1 3300050507 Bacteria 3800
253 nmdc:mga09592_7639_c1 3300050508 Bacteria 8790
254 nmdc:mga0qj67_12904_c1 3300050509 Bacteria 6304
255 nmdc:mga0qj67_30051_c1 3300050509 Bacteria 4225
256 nmdc:mga0qj67_4342_c1 3300050509 Bacteria 10269
257 nmdc:mga06r32_184609_c1 3300050510 Bacteria 2072
258 nmdc:mga06r32_20683_c1 3300050510 Bacteria 6062
259 nmdc:mga06r32_6036_c1 3300050510 Bacteria 10895
260 Ga0500572_000445 3300053111 Bacteria 14452
261 Ga0500597_000012 3300053120 Bacteria 43793
262 Ga0500559_0000399 3300053136 Bacteria 31350

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009147 Ga0114129_10014828 Ga0114129_1001482813 391
2 3300050509 nmdc:mga0qj67_4342_c1 nmdc:mga0qj67_4342_c1_7244_8605 394
3 3300046476 Ga0495662_0049952 Ga0495662_0049952_662_1957 406
4 3300046531 Ga0495665_0075264 Ga0495665_0075264_19_1347 417
5 3300039447 Ga0436361_1122316 Ga0436361_1122316_1152_2555 428
6 3300053111 Ga0500572_000445 Ga0500572_000445_11226_12872 432
7 3300053136 Ga0500559_0000399 Ga0500559_0000399_29501_31147 432
8 3300005544 Ga0070686_100004639 Ga0070686_1000046393 444
9 3300009176 Ga0105242_10005436 Ga0105242_100054366 444
10 3300009177 Ga0105248_10005841 Ga0105248_1000584115 444
11 3300025934 Ga0207686_10039252 Ga0207686_100392525 444
12 3300044673 Ga0453683_0005046 Ga0453683_0005046_5258_6730 444
13 3300021361 Ga0213872_10027828 Ga0213872_100278283 445
14 3300046615 Ga0495656_0000074 Ga0495656_0000074_29644_31245 447
15 3300050510 nmdc:mga06r32_184609_c1 nmdc:mga06r32_184609_c1_140_1651 449
16 3300009147 Ga0114129_10247237 Ga0114129_102472373 450
17 3300006028 Ga0070717_10000124 Ga0070717_100001248 451
18 3300042876 Ga0451577_0001103 Ga0451577_0001103_4598_6025 451
19 3300044712 Ga0453684_0024425 Ga0453684_0024425_1390_2856 451
20 3300044712 Ga0453684_0049541 Ga0453684_0049541_1843_3270 451
21 3300045051 Ga0451576_0003231 Ga0451576_0003231_812_2278 451
22 3300044656 Ga0466969_0000249 Ga0466969_0000249_20750_22306 452
23 3300044712 Ga0453684_0056875 Ga0453684_0056875_2696_4159 452
24 3300044719 Ga0466971_0041362 Ga0466971_0041362_228_1784 452
25 3300044842 Ga0466957_0000221 Ga0466957_0000221_4621_6177 452
26 3300046463 Ga0495653_0000515 Ga0495653_0000515_15_1448 453
27 3300006847 Ga0075431_100013075 Ga0075431_1000130754 454
28 3300050509 nmdc:mga0qj67_12904_c1 nmdc:mga0qj67_12904_c1_2647_4224 454
29 3300050510 nmdc:mga06r32_20683_c1 nmdc:mga06r32_20683_c1_2139_3716 454
30 3300042876 Ga0451577_0059693 Ga0451577_0059693_926_2458 456
31 3300044673 Ga0453683_0000380 Ga0453683_0000380_19949_21409 456
32 3300031911 Ga0307412_10059302 Ga0307412_100593022 457
33 3300032004 Ga0307414_10012364 Ga0307414_100123642 457
34 3300037418 Ga0395900_0077846 Ga0395900_0077846_1848_3395 457
35 3300044673 Ga0453683_0099481 Ga0453683_0099481_295_1809 457
36 3300028800 Ga0265338_10052647 Ga0265338_100526472 458
37 3300042876 Ga0451577_0001156 Ga0451577_0001156_14272_15747 458
38 3300044712 Ga0453684_0003232 Ga0453684_0003232_10701_12176 458
39 3300045051 Ga0451576_0020046 Ga0451576_0020046_2353_3828 458
40 3300046516 Ga0495628_0092798 Ga0495628_0092798_100_1614 459
41 3300046529 Ga0495652_0076514 Ga0495652_0076514_58_1572 459
42 3300005439 Ga0070711_100029813 Ga0070711_1000298135 462
43 3300037853 Ga0436364_1089403 Ga0436364_1089403_2958_4472 462
44 3300044712 Ga0453684_0023017 Ga0453684_0023017_7324_8808 462
45 3300046535 Ga0495586_0006953 Ga0495586_0006953_1336_2916 462
46 3300047319 Ga0495674_0038757 Ga0495674_0038757_1018_2598 462
47 3300006846 Ga0075430_100043821 Ga0075430_1000438212 463
48 3300050509 nmdc:mga0qj67_30051_c1 nmdc:mga0qj67_30051_c1_667_2175 463
49 3300036401 Ga0373937_0103911 Ga0373937_0103911_832_2409 464
50 3300046679 Ga0495623_0020747 Ga0495623_0020747_1508_3085 464
51 3300047319 Ga0495674_0103302 Ga0495674_0103302_165_1742 464
52 3300047444 Ga0495675_0013611 Ga0495675_0013611_402_1979 464
53 3300028556 Ga0265337_1024366 Ga0265337_10243662 465
54 3300037312 Ga0395899_0000489 Ga0395899_0000489_27686_29269 465
55 3300006844 Ga0075428_100019817 Ga0075428_1000198179 467
56 3300006846 Ga0075430_100004086 Ga0075430_1000040864 467
57 3300006847 Ga0075431_100007847 Ga0075431_1000078473 467
58 3300006880 Ga0075429_100011954 Ga0075429_1000119543 467
59 3300037312 Ga0395899_0002033 Ga0395899_0002033_6193_7692 467
60 3300037418 Ga0395900_0001155 Ga0395900_0001155_25423_26922 467
61 3300037466 Ga0395898_0005562 Ga0395898_0005562_3776_5275 467
62 3300038443 Ga0395901_0005259 Ga0395901_0005259_3257_4756 467
63 3300042876 Ga0451577_0136548 Ga0451577_0136548_610_2136 467
64 3300045051 Ga0451576_0312730 Ga0451576_0312730_51_1577 467
65 3300050507 nmdc:mga05p37_89202_c1 nmdc:mga05p37_89202_c1_365_1990 467
66 3300050508 nmdc:mga09592_7639_c1 nmdc:mga09592_7639_c1_1866_3491 467
67 3300050510 nmdc:mga06r32_6036_c1 nmdc:mga06r32_6036_c1_1961_3586 467
68 3300005577 Ga0068857_100011568 Ga0068857_10001156810 468
69 3300026116 Ga0207674_10017962 Ga0207674_1001796210 468
70 3300028558 Ga0265326_10001132 Ga0265326_100011322 470
71 3300028573 Ga0265334_10000109 Ga0265334_1000010949 470
72 3300028654 Ga0265322_10009829 Ga0265322_100098292 470
73 3300037418 Ga0395900_0009978 Ga0395900_0009978_5257_6834 470
74 3300045051 Ga0451576_0012476 Ga0451576_0012476_7978_9528 470
75 3300045051 Ga0451576_0184672 Ga0451576_0184672_86_1636 470
76 3300046660 Ga0495625_0000750 Ga0495625_0000750_5777_7387 470
77 3300048907 Ga0496104_0000310 Ga0496104_0000310_37475_39103 471
78 3300048908 Ga0496105_0000163 Ga0496105_0000163_5081_6709 471
79 3300037312 Ga0395899_0009647 Ga0395899_0009647_3715_5319 472
80 3300037418 Ga0395900_0000768 Ga0395900_0000768_27735_29339 472
81 3300037466 Ga0395898_0001066 Ga0395898_0001066_15438_17042 472
82 3300037471 Ga0395905_0000753 Ga0395905_0000753_21218_22822 472
83 3300038443 Ga0395901_0057341 Ga0395901_0057341_140_1744 472
84 3300048915 Ga0496112_0000900 Ga0496112_0000900_17337_18956 472
85 3300005844 Ga0068862_100078457 Ga0068862_1000784572 473
86 3300028380 Ga0268265_10030180 Ga0268265_100301802 473
87 3300037312 Ga0395899_0001162 Ga0395899_0001162_2591_4195 473
88 3300037418 Ga0395900_0000745 Ga0395900_0000745_12876_14480 473
89 3300037466 Ga0395898_0001037 Ga0395898_0001037_19123_20727 473
90 3300037471 Ga0395905_0045109 Ga0395905_0045109_2188_3792 473
91 3300038443 Ga0395901_0000549 Ga0395901_0000549_9541_11145 473
92 3300047673 Ga0495593_0019279 Ga0495593_0019279_31_1551 473
93 iso_pu_bacteria 2831265667 2831271336 473
94 3300047472 Ga0495686_0000742 Ga0495686_0000742_24836_26407 474
95 3300028558 Ga0265326_10000966 Ga0265326_1000096611 476
96 3300028666 Ga0265336_10005960 Ga0265336_100059605 476
97 3300035121 Ga0373960_0000008 Ga0373960_0000008_3167_4765 476
98 3300046460 Ga0495638_0000149 Ga0495638_0000149_68519_70204 476
99 3300003775 Ga0055524_1000272 Ga0055524_100027225 477
100 3300003790 Ga0055528_1000300 Ga0055528_100030020 477
101 3300013307 Ga0157372_10074654 Ga0157372_100746542 477
102 3300025263 Ga0209565_1000775 Ga0209565_100077517 477
103 3300025273 Ga0209673_1000510 Ga0209673_100051038 477
104 3300025299 Ga0209256_1000077 Ga0209256_100007784 477
105 3300029957 Ga0265324_10006534 Ga0265324_100065343 477
106 3300044693 Ga0466961_0000525 Ga0466961_0000525_11434_13050 477
107 3300044719 Ga0466971_0002538 Ga0466971_0002538_4476_6092 477
108 3300005563 Ga0068855_100127958 Ga0068855_1001279583 478
109 3300006946 Ga0079104_1000011 Ga0079104_1000011153 478
110 3300009092 Ga0105250_10010161 Ga0105250_100101612 478
111 3300027111 Ga0209281_1000005 Ga0209281_1000005788 478
112 3300042124 Ga0450922_000796 Ga0450922_000796_318_1874 478
113 3300048920 Ga0496117_0007247 Ga0496117_0007247_7705_9300 478
114 3300044684 Ga0466966_0001618 Ga0466966_0001618_6455_8104 479
115 3300005353 Ga0070669_100001276 Ga0070669_10000127618 480
116 3300005617 Ga0068859_100015030 Ga0068859_10001503010 480
117 3300005842 Ga0068858_100003326 Ga0068858_10000332615 480
118 3300006931 Ga0097620_100015031 Ga0097620_10001503110 480
119 3300009177 Ga0105248_10004192 Ga0105248_1000419215 480
120 3300025923 Ga0207681_10000314 Ga0207681_1000031416 480
121 3300025941 Ga0207711_10002398 Ga0207711_1000239816 480
122 3300026035 Ga0207703_10009401 Ga0207703_100094017 480
123 3300037312 Ga0395899_0000482 Ga0395899_0000482_568_2193 480
124 3300037418 Ga0395900_0039787 Ga0395900_0039787_797_2422 480
125 3300037466 Ga0395898_0002114 Ga0395898_0002114_3887_5512 480
126 3300044712 Ga0453684_0042810 Ga0453684_0042810_4428_6035 480
127 3300046459 Ga0495629_0031562 Ga0495629_0031562_270_1817 480
128 3300046463 Ga0495653_0033648 Ga0495653_0033648_2371_3918 480
129 3300046475 Ga0495639_0000204 Ga0495639_0000204_28172_29719 480
130 3300046535 Ga0495586_0004444 Ga0495586_0004444_133_1680 480
131 3300046543 Ga0495645_0027036 Ga0495645_0027036_2439_3986 480
132 3300046559 Ga0495667_0016627 Ga0495667_0016627_2816_4363 480
133 3300046642 Ga0495634_0057150 Ga0495634_0057150_417_1964 480
134 3300046674 Ga0495588_0007701 Ga0495588_0007701_2482_4029 480
135 3300047470 Ga0495681_0000248 Ga0495681_0000248_18626_20248 480
136 3300048089 Ga0495614_0012805 Ga0495614_0012805_120_1667 480
137 3300048918 Ga0496115_0003892 Ga0496115_0003892_4383_5930 480
138 3300003316 rootH1_10012058 rootH1_100120589 481
139 3300003322 rootL2_10002149 rootL2_1000214916 481
140 3300005563 Ga0068855_100028969 Ga0068855_1000289694 481
141 3300049570 Ga0501033_0022893 Ga0501033_0022893_1488_3068 481
142 3300049822 Ga0501035_0000468 Ga0501035_0000468_32376_33956 481
143 3300037466 Ga0395898_0010749 Ga0395898_0010749_102_1694 482
144 3300037466 Ga0395898_0025001 Ga0395898_0025001_1130_2692 482
145 3300038443 Ga0395901_0019769 Ga0395901_0019769_4045_5637 482
146 3300044673 Ga0453683_0030228 Ga0453683_0030228_848_2437 482
147 3300053120 Ga0500597_000012 Ga0500597_000012_32359_34005 482
148 3300005614 Ga0068856_100042691 Ga0068856_1000426914 483
149 3300005616 Ga0068852_100006124 Ga0068852_10000612412 483
150 3300026142 Ga0207698_10025803 Ga0207698_100258035 483
151 3300046507 Ga0495606_0000887 Ga0495606_0000887_11465_13024 483
152 3300046522 Ga0495643_0011957 Ga0495643_0011957_591_2150 483
153 3300003322 rootL2_10065005 rootL2_1006500532 484
154 3300005289 Ga0065704_10085698 Ga0065704_100856983 484
155 3300009093 Ga0105240_10025091 Ga0105240_100250915 484
156 3300020081 Ga0206354_10634436 Ga0206354_106344362 484
157 3300020082 Ga0206353_10072693 Ga0206353_100726932 484
158 3300025913 Ga0207695_10130406 Ga0207695_101304062 484
159 3300037312 Ga0395899_0003019 Ga0395899_0003019_5548_7116 484
160 3300037418 Ga0395900_0002892 Ga0395900_0002892_16093_17661 484
161 3300037466 Ga0395898_0007419 Ga0395898_0007419_4526_6148 484
162 3300042119 Ga0450915_000003 Ga0450915_000003_1453_3051 484
163 3300042126 Ga0450888_000170 Ga0450888_000170_558_2156 484
164 3300042126 Ga0450888_000819 Ga0450888_000819_246_1844 484
165 3300042144 Ga0450889_000031 Ga0450889_000031_4966_6564 484
166 3300046454 Ga0495592_0000270 Ga0495592_0000270_6700_8256 484
167 3300046457 Ga0495590_0000128 Ga0495590_0000128_2642_4216 484
168 3300046462 Ga0495651_0000553 Ga0495651_0000553_14552_16108 484
169 3300046462 Ga0495651_0020566 Ga0495651_0020566_2319_3878 484
170 3300046463 Ga0495653_0000238 Ga0495653_0000238_6021_7577 484
171 3300046472 Ga0495580_0049538 Ga0495580_0049538_65_1621 484
172 3300046476 Ga0495662_0000146 Ga0495662_0000146_17590_19146 484
173 3300046477 Ga0495664_0000091 Ga0495664_0000091_14078_15634 484
174 3300046477 Ga0495664_0000159 Ga0495664_0000159_15996_17555 484
175 3300046511 Ga0495608_0001799 Ga0495608_0001799_9878_11434 484
176 3300046514 Ga0495618_0000187 Ga0495618_0000187_5588_7144 484
177 3300046516 Ga0495628_0000415 Ga0495628_0000415_14552_16108 484
178 3300046516 Ga0495628_0000985 Ga0495628_0000985_19994_21553 484
179 3300046517 Ga0495630_0000232 Ga0495630_0000232_34683_36239 484
180 3300046526 Ga0495666_0000049 Ga0495666_0000049_695_2251 484
181 3300046529 Ga0495652_0000519 Ga0495652_0000519_32612_34186 484
182 3300046529 Ga0495652_0000538 Ga0495652_0000538_23033_24589 484
183 3300046531 Ga0495665_0000116 Ga0495665_0000116_28742_30298 484
184 3300046533 Ga0495640_0000148 Ga0495640_0000148_42000_43556 484
185 3300046535 Ga0495586_0000155 Ga0495586_0000155_37901_39457 484
186 3300046535 Ga0495586_0003245 Ga0495586_0003245_2073_3632 484
187 3300046536 Ga0495587_0000198 Ga0495587_0000198_22_1578 484
188 3300046543 Ga0495645_0000532 Ga0495645_0000532_7010_8569 484
189 3300046543 Ga0495645_0014247 Ga0495645_0014247_3309_4865 484
190 3300046543 Ga0495645_0076799 Ga0495645_0076799_600_2159 484
191 3300046559 Ga0495667_0000169 Ga0495667_0000169_650_2206 484
192 3300046642 Ga0495634_0000358 Ga0495634_0000358_61_1617 484
193 3300046642 Ga0495634_0010821 Ga0495634_0010821_2782_4353 484
194 3300046642 Ga0495634_0032151 Ga0495634_0032151_240_1796 484
195 3300046663 Ga0495635_0002683 Ga0495635_0002683_7392_8948 484
196 3300046675 Ga0495657_0002386 Ga0495657_0002386_3664_5220 484
197 3300046678 Ga0495599_0000159 Ga0495599_0000159_654_2210 484
198 3300046679 Ga0495623_0000130 Ga0495623_0000130_39465_41021 484
199 3300046679 Ga0495623_0034528 Ga0495623_0034528_729_2303 484
200 3300046680 Ga0495646_0000090 Ga0495646_0000090_654_2210 484
201 3300046680 Ga0495646_0003720 Ga0495646_0003720_5856_7415 484
202 3300046689 Ga0495613_0000304 Ga0495613_0000304_752_2308 484
203 3300046689 Ga0495613_0004738 Ga0495613_0004738_7905_9476 484
204 3300046690 Ga0495624_0000208 Ga0495624_0000208_20240_21811 484
205 3300046694 Ga0495649_0019425 Ga0495649_0019425_1939_3498 484
206 3300046794 Ga0495589_0001499 Ga0495589_0001499_8563_10119 484
207 3300046809 Ga0495600_0000117 Ga0495600_0000117_26081_27637 484
208 3300047315 Ga0495581_0000003 Ga0495581_0000003_36544_38100 484
209 3300047315 Ga0495581_0000003 Ga0495581_0000003_80687_82243 484
210 3300047315 Ga0495581_0037008 Ga0495581_0037008_995_2554 484
211 3300047317 Ga0495604_0000301 Ga0495604_0000301_38561_40117 484
212 3300047317 Ga0495604_0000918 Ga0495604_0000918_19362_20918 484
213 3300047319 Ga0495674_0000269 Ga0495674_0000269_26761_28317 484
214 3300047319 Ga0495674_0009385 Ga0495674_0009385_3863_5419 484
215 3300047319 Ga0495674_0013910 Ga0495674_0013910_2721_4280 484
216 3300047319 Ga0495674_0026002 Ga0495674_0026002_1682_3250 484
217 3300047322 Ga0495680_0002418 Ga0495680_0002418_9320_10876 484
218 3300047444 Ga0495675_0000128 Ga0495675_0000128_3814_5370 484
219 3300047444 Ga0495675_0000128 Ga0495675_0000128_47957_49513 484
220 3300047471 Ga0495684_0000220 Ga0495684_0000220_31509_33065 484
221 3300047673 Ga0495593_0035769 Ga0495593_0035769_277_1848 484
222 3300048088 Ga0495602_0000322 Ga0495602_0000322_9427_10983 484
223 3300048089 Ga0495614_0029306 Ga0495614_0029306_548_2119 484
224 3300048928 Ga0496125_0006756 Ga0496125_0006756_6089_7687 484
225 3300037312 Ga0395899_0004900 Ga0395899_0004900_8039_9643 485
226 3300037418 Ga0395900_0001315 Ga0395900_0001315_1876_3525 485
227 3300037418 Ga0395900_0009269 Ga0395900_0009269_1821_3452 485
228 3300037418 Ga0395900_0100204 Ga0395900_0100204_678_2288 485
229 3300037466 Ga0395898_0001031 Ga0395898_0001031_26198_27847 485
230 3300037466 Ga0395898_0011871 Ga0395898_0011871_2169_3800 485
231 3300037466 Ga0395898_0065567 Ga0395898_0065567_1313_2917 485
232 3300038443 Ga0395901_0000543 Ga0395901_0000543_24715_26364 485
233 3300046660 Ga0495625_0000083 Ga0495625_0000083_75688_77334 485
234 3300003322 rootL2_10021850 rootL2_1002185038 486
235 3300003323 rootH1_10150848 rootH1_1015084811 486
236 3300037466 Ga0395898_0001047 Ga0395898_0001047_28530_30158 486
237 3300044842 Ga0466957_0000077 Ga0466957_0000077_36518_38149 486
238 3300045049 Ga0466959_0000249 Ga0466959_0000249_8610_10241 486
239 3300047472 Ga0495686_0039580 Ga0495686_0039580_545_2191 486
240 3300049570 Ga0501033_0003971 Ga0501033_0003971_9135_10745 486
241 3300049574 Ga0501038_0119347 Ga0501038_0119347_232_1842 486
242 3300049581 Ga0501047_0006270 Ga0501047_0006270_8597_10207 486
243 3300049822 Ga0501035_0000603 Ga0501035_0000603_29931_31541 486
244 3300049823 Ga0501044_0002063 Ga0501044_0002063_13870_15480 486
245 3300002705 JGI25156J39149_1006395 JGI25156J39149_10063952 490
246 3300002737 JGI25162J39368_1000066 JGI25162J39368_1000066107 490
247 3300002741 JGI25157J39369_1000283 JGI25157J39369_100028340 490
248 3300002771 JGI25163J39215_1000554 JGI25163J39215_100055414 490
249 3300002772 JGI25164J39214_1000387 JGI25164J39214_10003872 490
250 3300003214 JGI25165J46597_1000009 JGI25165J46597_1000009107 490
251 3300003761 Ga0055535_1000045 Ga0055535_1000045107 490
252 3300003761 Ga0055535_1000622 Ga0055535_100062232 490
253 3300003762 Ga0055542_1000079 Ga0055542_1000079107 490
254 3300003763 Ga0055529_1000188 Ga0055529_10001882 490
255 3300025207 Ga0209760_100460 Ga0209760_10046010 490
256 3300025224 Ga0209784_100013 Ga0209784_100013389 490
257 3300025231 Ga0207427_100030 Ga0207427_100030190 490
258 3300025233 Ga0209437_100012 Ga0209437_100012640 490
259 3300025242 Ga0209258_100019 Ga0209258_100019149 490
260 3300025246 Ga0209646_1000349 Ga0209646_100034911 490
261 3300025250 Ga0209026_1000015 Ga0209026_1000015284 490
262 3300025254 Ga0209148_1000001 Ga0209148_10000012151 490
263 3300025256 Ga0209759_1000367 Ga0209759_100036736 490
264 3300025261 Ga0209233_1000002 Ga0209233_1000002149 490
265 3300025272 Ga0209455_1000027 Ga0209455_1000027397 490

Structural Annotation

Top 5 Hits

ID Description Score Start End
5tge-assembly1.cif.gz_A thermus phage p74-26 large terminase nuclease domain 0.7698 291 462
5c2f-assembly1.cif.gz_A k428a mutant nuclease domain of the large terminase subunit gp2 of bacterial virus sf6 with manganese and beta-thujaplicinol 0.7682 268 467
5c10-assembly1.cif.gz_A nuclease domain of the large terminase subunit gp2 of bacterial virus sf6 0.7632 268 467
5m1q-assembly1.cif.gz_A crystal structure of the large terminase nuclease from thermophilic phage g20c with bound zinc 0.7546 284 462
5m1o-assembly2.cif.gz_B crystal structure of the large terminase nuclease from thermophilic phage g20c with bound cobalt 0.7535 284 462
ID Description Score Start End Superfamily
af_Q2FX51_17_230_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7588 30 258 3.40.50.300
4ieeA02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; 0.7586 265 464 3.30.420.240
5m1qA00 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; 0.7547 284 462 3.30.420.240
af_Q2FX51_17_230_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7492 30 258 3.40.50.300
af_Q2FWT4_43_253_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7009 39 166 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3N5SW47-F1-model_v4 Terminase 0.9676 22 244
AF-A0A0F9TSL9-F1-model_v4 Uncharacterized protein 0.9665 24 263
AF-A0A4Q3P699-F1-model_v4 deleted 0.9426 8 207
AF-A0A3S9SMR5-F1-model_v4 Terminase 0.9232 28 485
AF-A0A6H2A5E8-F1-model_v4 Putative terminase 0.911 1 248

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pLDDT pTM Quality
86.87 0.72 High
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Predicted Structure (AlphaFold2)

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